BLASTX nr result

ID: Zingiber23_contig00014055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00014055
         (381 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302112.2| Ribosome recycling factor family protein [Po...    56   4e-06

>ref|XP_002302112.2| Ribosome recycling factor family protein [Populus trichocarpa]
           gi|550344331|gb|EEE81385.2| Ribosome recycling factor
           family protein [Populus trichocarpa]
          Length = 286

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
 Frame = -1

Query: 261 SLRAPGLSPSRTLCVRIPENVHNGNMY----------THLSSWSSSFTYSILKEGTTAFF 112
           S+  P  +P + L + +P + H G             T +S WSSS  YS L+ G+T   
Sbjct: 16  SIFQPNPNPPKAL-LSLPGSFHRGPHRAKVCYNSIGATSVSLWSSSANYSSLRNGSTKLS 74

Query: 111 CKNLGNNKHFKRRKGIIKCATIEEIEAEKLVIEKDAR 1
            K +   +  + R+G+++ ATIEEIEAEK +IE DA+
Sbjct: 75  GKPVAVKRLLQNRRGVVRNATIEEIEAEKSLIEDDAK 111