BLASTX nr result

ID: Zingiber23_contig00013408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00013408
         (758 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32953.3| unnamed protein product [Vitis vinifera]               58   4e-06
ref|XP_002304079.2| hypothetical protein POPTR_0003s01750g [Popu...    57   5e-06

>emb|CBI32953.3| unnamed protein product [Vitis vinifera]
          Length = 462

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 47/125 (37%), Positives = 55/125 (44%), Gaps = 26/125 (20%)
 Frame = -1

Query: 755 IVAQNEQKAGSLI----------VSTSITHESHKDNEISSSGVSSLSDCTESY--GSMGM 612
           +V + E K G +I           +TS    S  +N  SSSGVS +SDC  S    S   
Sbjct: 340 LVQERETKKGGMIGPGLFHGLVPTATSTGGSSFDNN--SSSGVSVISDCINSLEKASKRR 397

Query: 611 DQHLMPPLELAPXXXXXXXXXXXFAFT--------------EGRVHGGGLMSFLGRNLKN 474
            Q L+PP  L P              T              EGRVHGGGLMS LG NLKN
Sbjct: 398 QQQLIPPQVLVPLSMKSSSSYSSSNNTAGGKSFNMMMMMIPEGRVHGGGLMSMLGGNLKN 457

Query: 473 AVNDV 459
           A N+V
Sbjct: 458 ACNEV 462


>ref|XP_002304079.2| hypothetical protein POPTR_0003s01750g [Populus trichocarpa]
           gi|550342152|gb|EEE79058.2| hypothetical protein
           POPTR_0003s01750g [Populus trichocarpa]
          Length = 642

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 40/112 (35%), Positives = 49/112 (43%), Gaps = 25/112 (22%)
 Frame = -1

Query: 719 IVSTSITHESHKDNEISSSGVSSLSDCTESYGSMGMDQHLMPPLELAPXXXXXXXXXXXF 540
           +VS + T  S  DN  S SGVS++SDC++S        HL+PP  L P           F
Sbjct: 531 LVSAASTAGSSIDNNHSYSGVSAVSDCSDSLEKPAKRLHLIPPQVLVPHSMKATSSFTSF 590

Query: 539 A-------------------------FTEGRVHGGGLMSFLGRNLKNAVNDV 459
                                       EGRVHGGGLMS  G NL+NA+N V
Sbjct: 591 MNADNLEEGTNGYGATSGGKKNFDYLVPEGRVHGGGLMSLFGGNLRNAINGV 642


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