BLASTX nr result
ID: Zingiber23_contig00012748
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00012748
(856 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006382253.1| Phytochrome-interacting factor 3 family prot... 82 2e-13
ref|XP_002330047.1| predicted protein [Populus trichocarpa] 82 2e-13
emb|CBI39676.3| unnamed protein product [Vitis vinifera] 82 3e-13
ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [V... 78 5e-12
emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera] 78 5e-12
ref|XP_006840391.1| hypothetical protein AMTR_s00045p00141060 [A... 76 1e-11
ref|XP_006423961.1| hypothetical protein CICLE_v10027890mg [Citr... 74 5e-11
ref|XP_002319450.2| hypothetical protein POPTR_0013s00310g [Popu... 61 5e-07
ref|XP_004230368.1| PREDICTED: transcription factor PIF3-like [S... 59 2e-06
gb|AEX32796.1| phytochrome-interacting factor 3 [Malus domestica] 59 2e-06
ref|XP_002512587.1| conserved hypothetical protein [Ricinus comm... 58 5e-06
>ref|XP_006382253.1| Phytochrome-interacting factor 3 family protein [Populus
trichocarpa] gi|550337605|gb|ERP60050.1|
Phytochrome-interacting factor 3 family protein [Populus
trichocarpa]
Length = 742
Score = 82.4 bits (202), Expect = 2e-13
Identities = 86/306 (28%), Positives = 128/306 (41%), Gaps = 59/306 (19%)
Frame = -3
Query: 845 PKSSFPSTAFCYGTVQAKQTREIDP-------------------------KFSQSRSDGH 741
P++ F + G +Q+ + R+I P KF S +
Sbjct: 34 PENDFGELIWENGQIQSSRARKIQPCSTLPCQNPKIRYKDIGNGTDIRTGKFGMMESTLN 93
Query: 740 DYCTTKHSANRGVNAQDDDIVPWISYPIEEVLPSETLQPQNDYCAEFLNEFLAFDMDPLS 561
+ + + GVN QDDD+VPW++YP++E PQ+DYC+EFL E ++ S
Sbjct: 94 ELPMSVPAVEMGVN-QDDDMVPWLNYPLDE-------SPQHDYCSEFLPELSGVTVNGHS 145
Query: 560 APKCSIAATGQTDKFSQEVRRSNNTDRSHATKAPRW----NWASGRMKATHPQQNHASAL 393
+ + + + G+ FSQ VR S + + N ++G +A P+ + +
Sbjct: 146 S-QSNFPSFGKKS-FSQSVRDSRTVSVHNGLSLEQGDVAKNSSAGDTEANRPRTSASQLY 203
Query: 392 NSKSTVVD----------SCGSGIDVAQKLHCRDVMDR-RLQNQG-----LKSSKQL--Q 267
S S S +G + H +D R G +K KQ+ Q
Sbjct: 204 LSSSEHCQTSFPYFRSRVSAKNGDSTSNAAHHVVSVDSIRAPTSGGGFPSIKMQKQVPAQ 263
Query: 266 QPTISGLMNFSHFARPAALAKVTHQSAVGWK------------RIDKASPPPNSNPVRLT 123
T S LMNFSHFARPAALAK Q+ +G + DK S +SNP T
Sbjct: 264 STTNSSLMNFSHFARPAALAKANLQN-IGMRAGTGISNMERTQNKDKGSIASSSNPAECT 322
Query: 122 PIESVS 105
PI S S
Sbjct: 323 PINSCS 328
>ref|XP_002330047.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 82.4 bits (202), Expect = 2e-13
Identities = 86/306 (28%), Positives = 128/306 (41%), Gaps = 59/306 (19%)
Frame = -3
Query: 845 PKSSFPSTAFCYGTVQAKQTREIDP-------------------------KFSQSRSDGH 741
P++ F + G +Q+ + R+I P KF S +
Sbjct: 25 PENDFGELIWENGQIQSSRARKIQPCSTLPCQNPKIRYKDIGNGTDIRTGKFGMMESTLN 84
Query: 740 DYCTTKHSANRGVNAQDDDIVPWISYPIEEVLPSETLQPQNDYCAEFLNEFLAFDMDPLS 561
+ + + GVN QDDD+VPW++YP++E PQ+DYC+EFL E ++ S
Sbjct: 85 ELPMSVPAVEMGVN-QDDDMVPWLNYPLDE-------SPQHDYCSEFLPELSGVTVNGHS 136
Query: 560 APKCSIAATGQTDKFSQEVRRSNNTDRSHATKAPRW----NWASGRMKATHPQQNHASAL 393
+ + + + G+ FSQ VR S + + N ++G +A P+ + +
Sbjct: 137 S-QSNFPSFGKKS-FSQSVRDSRTVSVHNGLSLEQGDVAKNSSAGDTEANRPRTSASQLY 194
Query: 392 NSKSTVVD----------SCGSGIDVAQKLHCRDVMDR-RLQNQG-----LKSSKQL--Q 267
S S S +G + H +D R G +K KQ+ Q
Sbjct: 195 LSSSEHCQTSFPYFRSRVSAKNGDSTSNAAHHVVSVDSIRAPTSGGGFPSIKMQKQVPAQ 254
Query: 266 QPTISGLMNFSHFARPAALAKVTHQSAVGWK------------RIDKASPPPNSNPVRLT 123
T S LMNFSHFARPAALAK Q+ +G + DK S +SNP T
Sbjct: 255 STTNSSLMNFSHFARPAALAKANLQN-IGMRAGTGISNMERTQNKDKGSIASSSNPAECT 313
Query: 122 PIESVS 105
PI S S
Sbjct: 314 PINSCS 319
>emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 81.6 bits (200), Expect = 3e-13
Identities = 57/187 (30%), Positives = 85/187 (45%), Gaps = 5/187 (2%)
Frame = -3
Query: 728 TKHSANRGVNAQDDDIVPWISYPIEEVLPSETLQPQNDYCAEFLNEFLAFDMDPLSAPKC 549
T H N + QDDD+VPW++YPI+E L Q+DYC++FL E ++ LS C
Sbjct: 72 TGHGTNSKMGNQDDDMVPWLNYPIDESL-------QHDYCSDFLQELSGVTVNELST-HC 123
Query: 548 SIAATGQTDKFSQEVRRSNNTDRSHATKAPRWNWASGRMKATHPQQNHASALNSKSTVVD 369
+ A+ + + +Q ++ SN + + N + P + +S L S+
Sbjct: 124 NFASGEKRNSNNQTIKDSNTISAHNGVSLEQGNASKASAAGVEPSRPRSSQLYPPSS--- 180
Query: 368 SCGSGIDVAQKLHCRDVMDRRLQNQGLKSSK-QLQQP----TISGLMNFSHFARPAALAK 204
++ G S+K Q Q P SGLMNFSHF+RPAAL K
Sbjct: 181 -------------------QQSSTSGFSSTKTQKQDPGQTRNNSGLMNFSHFSRPAALVK 221
Query: 203 VTHQSAV 183
Q+ V
Sbjct: 222 ANLQNIV 228
>ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 77.8 bits (190), Expect = 5e-12
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 19/204 (9%)
Frame = -3
Query: 743 HDYCTTKHSANRGVNAQDDDIVPWISYPIEEVLPSETLQPQNDYCAEFLNEFLAFDMDPL 564
+D+ + SA G++ QDDD+VPW++YPI+E L Q+DYC++FL E ++ L
Sbjct: 91 NDFPLSVPSAEMGLS-QDDDMVPWLNYPIDESL-------QHDYCSDFLQELSGVTVNEL 142
Query: 563 SAPKCSIAATGQTDKFSQEVRRSNNTDRSHATKAPRWNWASGRMKATHPQQNHASALNSK 384
S C+ A+ + + +Q ++ SN + + N + P + +S L
Sbjct: 143 ST-HCNFASGEKRNSNNQTIKDSNTISAHNGVSLEQGNASKASAAGVEPSRPRSSQLYPP 201
Query: 383 S-----TVVDSCGSGIDVAQKLHCRDVMDRRLQNQ---------GLKSSK-QLQQP---- 261
S T+ S S + + + M + G S+K Q Q P
Sbjct: 202 SSQQCQTLFPSMRSKVSDPISNNTSNAMHHTVSGNSIRLPASTSGFSSTKTQKQDPGQTR 261
Query: 260 TISGLMNFSHFARPAALAKVTHQS 189
SGLMNFSHF+RPAAL K Q+
Sbjct: 262 NNSGLMNFSHFSRPAALVKANLQN 285
>emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 77.8 bits (190), Expect = 5e-12
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 19/204 (9%)
Frame = -3
Query: 743 HDYCTTKHSANRGVNAQDDDIVPWISYPIEEVLPSETLQPQNDYCAEFLNEFLAFDMDPL 564
+D+ + SA G++ QDDD+VPW++YPI+E L Q+DYC++FL E ++ L
Sbjct: 91 NDFPLSVPSAEMGLS-QDDDMVPWLNYPIDESL-------QHDYCSDFLQELSGVTVNEL 142
Query: 563 SAPKCSIAATGQTDKFSQEVRRSNNTDRSHATKAPRWNWASGRMKATHPQQNHASALNSK 384
S C+ A+ + + +Q ++ SN + + N + P + +S L
Sbjct: 143 ST-HCNFASGEKRNSNNQTIKDSNTISAHNGVSLEQGNASKASAAGVEPSRPRSSQLYPP 201
Query: 383 S-----TVVDSCGSGIDVAQKLHCRDVMDRRLQNQ---------GLKSSK-QLQQP---- 261
S T+ S S + + + M + G S+K Q Q P
Sbjct: 202 SSQQCQTLFPSMRSKVSDPISNNTSNAMHHTVSGNSIRLPASTSGFSSTKTQKQDPGQTR 261
Query: 260 TISGLMNFSHFARPAALAKVTHQS 189
SGLMNFSHF+RPAAL K Q+
Sbjct: 262 NNSGLMNFSHFSRPAALVKANLQN 285
>ref|XP_006840391.1| hypothetical protein AMTR_s00045p00141060 [Amborella trichopoda]
gi|548842109|gb|ERN02066.1| hypothetical protein
AMTR_s00045p00141060 [Amborella trichopoda]
Length = 781
Score = 76.3 bits (186), Expect = 1e-11
Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 13/227 (5%)
Frame = -3
Query: 695 QDDDIVPWISYPIEEVLPSETLQPQNDYCAEFLNEFLAFDMDPLSAPKCSIAATGQTDKF 516
Q+D++VPW++YP+++ L + DYC+EF E ++ PLS P + + +
Sbjct: 191 QEDEMVPWLNYPLDDSL-------ERDYCSEFFPELSGVNLTPLSKPTNVVVSEKACNL- 242
Query: 515 SQEVRRSNNTDRSHATKAPRWNWASGRMKATHPQQNHASALNS-------KSTVVDSCGS 357
+ N H+++AP R++A P + ++ +T SCG+
Sbjct: 243 --DTTSHKNLSMEHSSQAP------SRLRALQPFNSQQGQPSNPILRQFPSNTHKSSCGN 294
Query: 356 GIDVAQKLHCRDVMDRRLQ-NQGLKSSKQLQQPTISGLMNFSHFARPAALAKVTHQSAVG 180
V + Q N G S + QPT + LMNFSHF+RPAAL K QS
Sbjct: 295 SSSPGANPAIGIVNSKTEQPNHG---STRPPQPTHTNLMNFSHFSRPAALVKANLQSMGM 351
Query: 179 WKRI----DKASPPPNSNPVRLTPIES-VSSTKDANKVSGQSGSDPH 54
R+ DKAS +SNPV + ++S V S K+ Q + H
Sbjct: 352 AGRLKNNNDKAS-VTDSNPVESSIVDSAVVSKSGKTKLDQQCQASLH 397
>ref|XP_006423961.1| hypothetical protein CICLE_v10027890mg [Citrus clementina]
gi|567862616|ref|XP_006423962.1| hypothetical protein
CICLE_v10027890mg [Citrus clementina]
gi|568853382|ref|XP_006480339.1| PREDICTED:
transcription factor PIF3-like [Citrus sinensis]
gi|557525895|gb|ESR37201.1| hypothetical protein
CICLE_v10027890mg [Citrus clementina]
gi|557525896|gb|ESR37202.1| hypothetical protein
CICLE_v10027890mg [Citrus clementina]
Length = 735
Score = 74.3 bits (181), Expect = 5e-11
Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 25/228 (10%)
Frame = -3
Query: 719 SANRGVNAQDDDIVPWISYPIEEVLPSETLQPQNDYCAEFLNEFLAFDMDPLSAPKCSIA 540
S G+N QDDD+VPW++Y ++E L Q DYC++FL+E + LS+ + A
Sbjct: 103 SGEMGLN-QDDDMVPWLNYAVDESL-------QQDYCSDFLHELSGVTGNELSSQN-NFA 153
Query: 539 ATGQTDKFSQEVRRSNNTDRSHATKAPRWNWAS----GRMKATHPQQNHASALNSKS--- 381
+ + +Q R N+ +H + N + G +AT P+ + S S S
Sbjct: 154 SFDKRSSSNQFDREFNSVFGNHGARLEHGNVSKVSSVGGGEATRPRSSTNSVYTSSSQQC 213
Query: 380 -TVVDSCGSGIDVAQKLHCRDVMDRRLQN----------QGLKSSKQLQQPTI--SGLMN 240
T + + SG+ + ++ D + GLK KQ Q+ + SG+MN
Sbjct: 214 QTSLPNLRSGVSDSTSNGIKNSTDNGIFQGSNPTATGNLSGLKLHKQDQRLSANNSGVMN 273
Query: 239 FSHFARPAALAKVTHQS-----AVGWKRIDKASPPPNSNPVRLTPIES 111
FSHFARP AL + Q+ RI++ S+ +P+ES
Sbjct: 274 FSHFARPVALVRANLQNIGSMPGARLSRIERMGSKDKSSVASRSPVES 321
>ref|XP_002319450.2| hypothetical protein POPTR_0013s00310g [Populus trichocarpa]
gi|550324617|gb|EEE95373.2| hypothetical protein
POPTR_0013s00310g [Populus trichocarpa]
Length = 713
Score = 61.2 bits (147), Expect = 5e-07
Identities = 55/193 (28%), Positives = 82/193 (42%), Gaps = 24/193 (12%)
Frame = -3
Query: 695 QDDDIVPWISYPIEEVLPSETLQPQNDYCAEFLNEFLAFDMDPLSA----PKCSIAATGQ 528
QDDD+VPW++YP++E L Q+DYC++FL E ++ S+ P + Q
Sbjct: 103 QDDDMVPWLNYPLDEPL-------QHDYCSDFLPELSGVTVNEHSSQSNFPSFDKRSCNQ 155
Query: 527 --TDKFSQEVRRSNNTDRSHATKAPRWNWASGRMKATHPQQNHASALNSKSTVV------ 372
TD + V N ++ N ++G + A P+ + + S S
Sbjct: 156 SITDSHTVSVHNGLNLEQGDVVM----NSSAGDIDAKRPRTSASQLYPSSSEQCKTSFPF 211
Query: 371 ----DSCGSGIDVAQKLH---CRDVMDRRLQNQGLKSSKQLQQ-----PTISGLMNFSHF 228
DS + +H D + G S K +Q P S L+NFSHF
Sbjct: 212 FRSRDSTKKDDSTSNAVHHVIAPDSIRAPTSGGGFPSIKMQKQVPAPSPINSSLINFSHF 271
Query: 227 ARPAALAKVTHQS 189
ARPAAL K Q+
Sbjct: 272 ARPAALVKANLQN 284
>ref|XP_004230368.1| PREDICTED: transcription factor PIF3-like [Solanum lycopersicum]
Length = 723
Score = 59.3 bits (142), Expect = 2e-06
Identities = 56/194 (28%), Positives = 80/194 (41%), Gaps = 18/194 (9%)
Frame = -3
Query: 695 QDDDIVPWISYPIEEVLPSETLQPQNDYCAEFLNEFLAFDMDPLSAPKCS--IAATGQTD 522
Q+D+ VPW+ YP ++ L Q DYCA+ L E + S I G +D
Sbjct: 109 QEDEGVPWLGYPADDSL-------QQDYCAQLLPEISGVTANEQSGQSVFGLINKRGSSD 161
Query: 521 KF-----SQEVRRSNNTDRSHATKAPRWNWASGRMKATHPQQNHASALNSKSTVVDSCGS 357
K S V + N +R + +K + S + + Q+ HAS +S V D S
Sbjct: 162 KMIGDSHSVPVHNAVNFERRNTSKVSPSSRFSP-LSSLPSQKGHASIPTLESGVSDVFSS 220
Query: 356 ----------GIDVAQKLHCRDVMDRRLQNQGLKSSKQLQQPTISGLMNFSHFARPAALA 207
G K D R+Q Q + ++ S L+NFSHF+RPA L
Sbjct: 221 KNSNTPLSVLGESNQSKASAGDAKSNRIQKQNMPGNR-------SNLLNFSHFSRPATLV 273
Query: 206 KVTH-QSAVGWKRI 168
K QS+ G I
Sbjct: 274 KAAKLQSSTGGSNI 287
>gb|AEX32796.1| phytochrome-interacting factor 3 [Malus domestica]
Length = 713
Score = 58.9 bits (141), Expect = 2e-06
Identities = 65/241 (26%), Positives = 100/241 (41%), Gaps = 37/241 (15%)
Frame = -3
Query: 698 AQDDDIVPWISYPIEEVLPSETLQPQNDYCAEFLNEFLAFDMDPLSAPKCSIAATGQTDK 519
++DDD +PW++Y I+E L ++YC +FL EF + + S+ ++A+ +
Sbjct: 98 SEDDDTLPWLNYSIDEPL-------HHEYCHDFLPEFSSATANEASSNH-NLASIDKRSS 149
Query: 518 FSQEVRRSNNTDRSHATKAPRWNWAS----GRMKATHP------------QQNHASALNS 387
SQ +R SN + N GR + P QQ+ AS +
Sbjct: 150 SSQVLRDSNPNSAHEDACLQQRNVGKVALIGRADVSRPRTGTSQLHSLSSQQSQASYPSF 209
Query: 386 KSTVVDSCGSGIDVAQKLHCRDVMDRRLQNQ---GLKSSKQLQQPTIS------GLMNFS 234
+S V D+ G RDV Q G K L+ ++ ++NFS
Sbjct: 210 RSRVSDTAGDNTSATH----RDVGKNSTQISSAGGSPGMKILRPDPVTPSNNNPSIVNFS 265
Query: 233 HFARPAALAKVTHQ-----------SAVGWKRIDKASPPPNSNPVRLTPIESVSST-KDA 90
HF+RPAAL K Q S + DK S ++N PI+S SS K++
Sbjct: 266 HFSRPAALVKANVQTNGVMAGSGSSSMIRIANKDKFSAATSNNLPESMPIDSSSSAPKES 325
Query: 89 N 87
N
Sbjct: 326 N 326
>ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical
protein [Ricinus communis]
Length = 758
Score = 57.8 bits (138), Expect = 5e-06
Identities = 69/245 (28%), Positives = 107/245 (43%), Gaps = 37/245 (15%)
Frame = -3
Query: 719 SANRGVNAQDDDIVPWISYPIEEVLPSETLQPQNDYCAEFLNEFLAFDMDPLSAPKCSIA 540
S G+N Q+DD+VPW++ PI++ L Q DYC EFL E ++ + + S A
Sbjct: 103 SVEMGLN-QEDDMVPWLNDPIDDSL-------QQDYCHEFLAELSGVTVNEHA--QNSFA 152
Query: 539 ATGQTDKFSQEVRRSNNT--------DRSHATK--------APRWNWASGRMKATHPQQN 408
++ + +Q VR S+ ++ H + A R + ++ ++ QQ
Sbjct: 153 SSDKKCNGNQSVRDSHTASVHNGLSLEQGHMPRVSSGRDGDATRSRTTASQLYSSSVQQC 212
Query: 407 HASALNSKSTV----VDSCGSGIDVAQKLHCRDVMDRRLQNQGLKSSKQLQQ-----PTI 255
AS + +S + +S + VA D + G S K +Q T
Sbjct: 213 QASFPHFRSRISANNAESTNNSTHVASS---GDPIRGSPSGGGFPSIKAQKQVPVLATTN 269
Query: 254 SGLMNFSHFARPAALAKVTHQSAVGWK---------RI---DKASPPPNSNPVRLTPIES 111
S LMNFSHF+RP ALAK ++ +G + RI DK S +SNP E+
Sbjct: 270 SSLMNFSHFSRPVALAKANFEN-IGTRAGSGISSIERIGSQDKGSIASSSNPAESMLNET 328
Query: 110 VSSTK 96
S K
Sbjct: 329 FSGLK 333