BLASTX nr result
ID: Zingiber23_contig00012707
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00012707
(243 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003557313.1| PREDICTED: uncharacterized protein LOC100833... 96 5e-18
ref|NP_001051573.1| Os03g0799000 [Oryza sativa Japonica Group] g... 94 2e-17
gb|EAY92196.1| hypothetical protein OsI_13914 [Oryza sativa Indi... 94 2e-17
gb|AFI74270.1| linker histone H1 [Musa acuminata AAA Group] 93 3e-17
dbj|BAA25204.1| histone H1 [Triticum aestivum] 93 4e-17
dbj|BAJ90542.1| predicted protein [Hordeum vulgare subsp. vulgar... 92 5e-17
emb|CAA42529.2| histone H1 [Triticum aestivum] 91 1e-16
ref|XP_006651910.1| PREDICTED: histone H1-like [Oryza brachyantha] 91 1e-16
gb|EMT14197.1| Histone H1 [Aegilops tauschii] 91 1e-16
gb|EMS57075.1| Histone H1 [Triticum urartu] 91 1e-16
gb|AAD41006.1|AF107023_1 histone H1 WH1A.2 [Triticum aestivum] 91 1e-16
gb|AAD41005.1|AF107022_1 histone H1 WH1A.1 [Triticum aestivum] 91 1e-16
sp|P27806.2|H1_WHEAT RecName: Full=Histone H1 91 1e-16
ref|XP_002466284.1| hypothetical protein SORBIDRAFT_01g005010 [S... 91 1e-16
ref|XP_004981416.1| PREDICTED: histone H1-like [Setaria italica] 91 2e-16
dbj|BAJ99821.1| predicted protein [Hordeum vulgare subsp. vulgare] 91 2e-16
gb|AAD41009.1|AF107027_1 histone H1 WH1A.4 [Triticum aestivum] 89 5e-16
gb|EMT26985.1| Histone H1 [Aegilops tauschii] 89 6e-16
gb|AAD41008.1|AF107026_1 histone H1 WH1A.3 [Triticum aestivum] 89 6e-16
dbj|BAA25203.1| histone H1 [Triticum aestivum] 89 6e-16
>ref|XP_003557313.1| PREDICTED: uncharacterized protein LOC100833820 [Brachypodium
distachyon]
Length = 297
Score = 95.9 bits (237), Expect = 5e-18
Identities = 45/57 (78%), Positives = 49/57 (85%)
Frame = +3
Query: 72 HPPYAEMIKEAIVTLKEKGGSSTYAIGKFVEDKHKAHLPPNFRKFLLVQVKKLTAEG 242
HPPYAEM+ EAI TLKE+ GSS YAI KFVE+KHKAHLPPNFRK LLVQ+KKL A G
Sbjct: 59 HPPYAEMVSEAISTLKERTGSSQYAIAKFVEEKHKAHLPPNFRKLLLVQLKKLVAAG 115
>ref|NP_001051573.1| Os03g0799000 [Oryza sativa Japonica Group]
gi|28209501|gb|AAO37519.1| histone-like protein [Oryza
sativa Japonica Group] gi|108711572|gb|ABF99367.1|
linker histone H1 and H5 family protein, expressed
[Oryza sativa Japonica Group]
gi|113550044|dbj|BAF13487.1| Os03g0799000 [Oryza sativa
Japonica Group] gi|125588261|gb|EAZ28925.1| hypothetical
protein OsJ_12968 [Oryza sativa Japonica Group]
gi|215708730|dbj|BAG93999.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 293
Score = 94.0 bits (232), Expect = 2e-17
Identities = 45/57 (78%), Positives = 48/57 (84%)
Frame = +3
Query: 72 HPPYAEMIKEAIVTLKEKGGSSTYAIGKFVEDKHKAHLPPNFRKFLLVQVKKLTAEG 242
HPPYAEMI EAI TLKE+ GSS YAIGKF+EDKHK HLP NFRK LLVQ+KKL A G
Sbjct: 54 HPPYAEMISEAIATLKERTGSSQYAIGKFLEDKHKDHLPSNFRKQLLVQIKKLVAAG 110
>gb|EAY92196.1| hypothetical protein OsI_13914 [Oryza sativa Indica Group]
Length = 293
Score = 94.0 bits (232), Expect = 2e-17
Identities = 45/57 (78%), Positives = 48/57 (84%)
Frame = +3
Query: 72 HPPYAEMIKEAIVTLKEKGGSSTYAIGKFVEDKHKAHLPPNFRKFLLVQVKKLTAEG 242
HPPYAEMI EAI TLKE+ GSS YAIGKF+EDKHK HLP NFRK LLVQ+KKL A G
Sbjct: 54 HPPYAEMISEAIATLKERTGSSQYAIGKFLEDKHKDHLPSNFRKQLLVQIKKLVAAG 110
>gb|AFI74270.1| linker histone H1 [Musa acuminata AAA Group]
Length = 315
Score = 93.2 bits (230), Expect = 3e-17
Identities = 45/57 (78%), Positives = 49/57 (85%)
Frame = +3
Query: 72 HPPYAEMIKEAIVTLKEKGGSSTYAIGKFVEDKHKAHLPPNFRKFLLVQVKKLTAEG 242
HPPYAEMI EAIVTLKE+ GSS YAIGKF+EDKHK HLP NFRK LL Q+K+LTA G
Sbjct: 73 HPPYAEMIMEAIVTLKERTGSSQYAIGKFLEDKHKNHLPGNFRKILLGQLKRLTAAG 129
>dbj|BAA25204.1| histone H1 [Triticum aestivum]
Length = 288
Score = 92.8 bits (229), Expect = 4e-17
Identities = 42/57 (73%), Positives = 47/57 (82%)
Frame = +3
Query: 72 HPPYAEMIKEAIVTLKEKGGSSTYAIGKFVEDKHKAHLPPNFRKFLLVQVKKLTAEG 242
HP YAEM+ EAI LKE+GGSST AIGKF+EDKHKAHLP NFRK +L Q+KKL A G
Sbjct: 67 HPTYAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAG 123
>dbj|BAJ90542.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520894|dbj|BAJ92810.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 230
Score = 92.4 bits (228), Expect = 5e-17
Identities = 43/57 (75%), Positives = 47/57 (82%)
Frame = +3
Query: 72 HPPYAEMIKEAIVTLKEKGGSSTYAIGKFVEDKHKAHLPPNFRKFLLVQVKKLTAEG 242
HP YAEM+ EAI LKE+GGSST AIGKFVE+KHKAHLP NFRK LL Q+KKL A G
Sbjct: 48 HPSYAEMVSEAIAALKERGGSSTVAIGKFVEEKHKAHLPANFRKMLLTQIKKLVAAG 104
>emb|CAA42529.2| histone H1 [Triticum aestivum]
Length = 237
Score = 91.3 bits (225), Expect = 1e-16
Identities = 42/57 (73%), Positives = 46/57 (80%)
Frame = +3
Query: 72 HPPYAEMIKEAIVTLKEKGGSSTYAIGKFVEDKHKAHLPPNFRKFLLVQVKKLTAEG 242
HP YAEM+ EAI LKE+ GSST AIGKF+EDKHKAHLP NFRK LL Q+KKL A G
Sbjct: 54 HPSYAEMVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAAG 110
>ref|XP_006651910.1| PREDICTED: histone H1-like [Oryza brachyantha]
Length = 295
Score = 91.3 bits (225), Expect = 1e-16
Identities = 44/57 (77%), Positives = 47/57 (82%)
Frame = +3
Query: 72 HPPYAEMIKEAIVTLKEKGGSSTYAIGKFVEDKHKAHLPPNFRKFLLVQVKKLTAEG 242
HPPYAEMI EAI TLKE+ GSS YAI KF+EDKHK HLP NFRK LLVQ+KKL A G
Sbjct: 57 HPPYAEMISEAITTLKERTGSSQYAIAKFLEDKHKDHLPSNFRKQLLVQIKKLVAGG 113
>gb|EMT14197.1| Histone H1 [Aegilops tauschii]
Length = 237
Score = 91.3 bits (225), Expect = 1e-16
Identities = 42/57 (73%), Positives = 46/57 (80%)
Frame = +3
Query: 72 HPPYAEMIKEAIVTLKEKGGSSTYAIGKFVEDKHKAHLPPNFRKFLLVQVKKLTAEG 242
HP YAEM+ EAI LKE+ GSST AIGKF+EDKHKAHLP NFRK LL Q+KKL A G
Sbjct: 54 HPSYAEMVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAAG 110
>gb|EMS57075.1| Histone H1 [Triticum urartu]
Length = 291
Score = 91.3 bits (225), Expect = 1e-16
Identities = 42/57 (73%), Positives = 46/57 (80%)
Frame = +3
Query: 72 HPPYAEMIKEAIVTLKEKGGSSTYAIGKFVEDKHKAHLPPNFRKFLLVQVKKLTAEG 242
HP YAEM+ EAI LKE+ GSST AIGKF+EDKHKAHLP NFRK LL Q+KKL A G
Sbjct: 54 HPSYAEMVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAAG 110
>gb|AAD41006.1|AF107023_1 histone H1 WH1A.2 [Triticum aestivum]
Length = 237
Score = 91.3 bits (225), Expect = 1e-16
Identities = 42/57 (73%), Positives = 46/57 (80%)
Frame = +3
Query: 72 HPPYAEMIKEAIVTLKEKGGSSTYAIGKFVEDKHKAHLPPNFRKFLLVQVKKLTAEG 242
HP YAEM+ EAI LKE+ GSST AIGKF+EDKHKAHLP NFRK LL Q+KKL A G
Sbjct: 54 HPSYAEMVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAAG 110
>gb|AAD41005.1|AF107022_1 histone H1 WH1A.1 [Triticum aestivum]
Length = 236
Score = 91.3 bits (225), Expect = 1e-16
Identities = 42/57 (73%), Positives = 46/57 (80%)
Frame = +3
Query: 72 HPPYAEMIKEAIVTLKEKGGSSTYAIGKFVEDKHKAHLPPNFRKFLLVQVKKLTAEG 242
HP YAEM+ EAI LKE+ GSST AIGKF+EDKHKAHLP NFRK LL Q+KKL A G
Sbjct: 53 HPSYAEMVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAAG 109
>sp|P27806.2|H1_WHEAT RecName: Full=Histone H1
Length = 238
Score = 91.3 bits (225), Expect = 1e-16
Identities = 42/57 (73%), Positives = 46/57 (80%)
Frame = +3
Query: 72 HPPYAEMIKEAIVTLKEKGGSSTYAIGKFVEDKHKAHLPPNFRKFLLVQVKKLTAEG 242
HP YAEM+ EAI LKE+ GSST AIGKF+EDKHKAHLP NFRK LL Q+KKL A G
Sbjct: 55 HPSYAEMVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAAG 111
>ref|XP_002466284.1| hypothetical protein SORBIDRAFT_01g005010 [Sorghum bicolor]
gi|241920138|gb|EER93282.1| hypothetical protein
SORBIDRAFT_01g005010 [Sorghum bicolor]
Length = 281
Score = 91.3 bits (225), Expect = 1e-16
Identities = 44/57 (77%), Positives = 47/57 (82%)
Frame = +3
Query: 72 HPPYAEMIKEAIVTLKEKGGSSTYAIGKFVEDKHKAHLPPNFRKFLLVQVKKLTAEG 242
HPPYAEMI EAI +LKE+ GSS YAI KFVEDKHK LPPNFRK LLVQ+KKL A G
Sbjct: 50 HPPYAEMISEAITSLKERTGSSQYAIAKFVEDKHKDKLPPNFRKLLLVQLKKLVAAG 106
>ref|XP_004981416.1| PREDICTED: histone H1-like [Setaria italica]
Length = 295
Score = 90.9 bits (224), Expect = 2e-16
Identities = 44/57 (77%), Positives = 47/57 (82%)
Frame = +3
Query: 72 HPPYAEMIKEAIVTLKEKGGSSTYAIGKFVEDKHKAHLPPNFRKFLLVQVKKLTAEG 242
HPPYAEMI EAI +LKE+ GSS YAI KFVEDKHK LPPNFRK LLVQ+KKL A G
Sbjct: 50 HPPYAEMISEAITSLKERTGSSQYAIAKFVEDKHKDKLPPNFRKLLLVQLKKLVAGG 106
>dbj|BAJ99821.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 269
Score = 90.5 bits (223), Expect = 2e-16
Identities = 43/57 (75%), Positives = 46/57 (80%)
Frame = +3
Query: 72 HPPYAEMIKEAIVTLKEKGGSSTYAIGKFVEDKHKAHLPPNFRKFLLVQVKKLTAEG 242
HP YAEM+ EAI LKE+GGSST AI KFVEDKHKAHLP NFRK L VQ+KKL A G
Sbjct: 61 HPTYAEMVSEAITALKERGGSSTIAIAKFVEDKHKAHLPANFRKMLSVQLKKLVASG 117
>gb|AAD41009.1|AF107027_1 histone H1 WH1A.4 [Triticum aestivum]
Length = 238
Score = 89.4 bits (220), Expect = 5e-16
Identities = 41/57 (71%), Positives = 46/57 (80%)
Frame = +3
Query: 72 HPPYAEMIKEAIVTLKEKGGSSTYAIGKFVEDKHKAHLPPNFRKFLLVQVKKLTAEG 242
HP YAEM+ EAI LKE+ GSST AIGKF+EDKH+AHLP NFRK LL Q+KKL A G
Sbjct: 54 HPSYAEMVSEAIAALKERSGSSTIAIGKFIEDKHEAHLPANFRKILLTQIKKLVAGG 110
>gb|EMT26985.1| Histone H1 [Aegilops tauschii]
Length = 171
Score = 89.0 bits (219), Expect = 6e-16
Identities = 40/57 (70%), Positives = 46/57 (80%)
Frame = +3
Query: 72 HPPYAEMIKEAIVTLKEKGGSSTYAIGKFVEDKHKAHLPPNFRKFLLVQVKKLTAEG 242
HP YAEM+ EAI LKE+ GSST AI K++EDKHKAHLP NFRKF+L Q+KKL A G
Sbjct: 67 HPTYAEMVTEAIAALKERNGSSTVAIAKYIEDKHKAHLPANFRKFMLTQIKKLVAAG 123
>gb|AAD41008.1|AF107026_1 histone H1 WH1A.3 [Triticum aestivum]
Length = 227
Score = 89.0 bits (219), Expect = 6e-16
Identities = 41/57 (71%), Positives = 45/57 (78%)
Frame = +3
Query: 72 HPPYAEMIKEAIVTLKEKGGSSTYAIGKFVEDKHKAHLPPNFRKFLLVQVKKLTAEG 242
HP YAEM+ EAI LKE+ GSST AI KF+EDKHKAHLP NFRK LL Q+KKL A G
Sbjct: 43 HPSYAEMVSEAIAALKERSGSSTIAIAKFIEDKHKAHLPANFRKILLTQIKKLVAAG 99
>dbj|BAA25203.1| histone H1 [Triticum aestivum]
Length = 284
Score = 89.0 bits (219), Expect = 6e-16
Identities = 40/57 (70%), Positives = 46/57 (80%)
Frame = +3
Query: 72 HPPYAEMIKEAIVTLKEKGGSSTYAIGKFVEDKHKAHLPPNFRKFLLVQVKKLTAEG 242
HP YAEM+ EAI LKE+ GSST AI K++EDKHKAHLP NFRKF+L Q+KKL A G
Sbjct: 67 HPTYAEMVTEAIAALKERNGSSTVAIAKYIEDKHKAHLPANFRKFMLTQIKKLVAAG 123