BLASTX nr result
ID: Zingiber23_contig00012542
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00012542
(215 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006846451.1| hypothetical protein AMTR_s00018p00081410 [A... 69 8e-10
gb|ABK22422.1| unknown [Picea sitchensis] 67 2e-09
ref|XP_004985262.1| PREDICTED: 40S ribosomal protein S17-4-like ... 65 7e-09
gb|AFW85413.1| 40S ribosomal protein S17-4 [Zea mays] 65 1e-08
emb|CBI25023.3| unnamed protein product [Vitis vinifera] 64 2e-08
ref|XP_002436652.1| hypothetical protein SORBIDRAFT_10g006620 [S... 64 2e-08
gb|ACG48690.1| 40S ribosomal protein S17-4 [Zea mays] 64 2e-08
ref|NP_001132853.1| uncharacterized protein LOC100194345 [Zea ma... 64 2e-08
ref|XP_002268997.1| PREDICTED: 40S ribosomal protein S17 [Vitis ... 64 2e-08
gb|EMS65249.1| 40S ribosomal protein S17-4 [Triticum urartu] 64 2e-08
ref|NP_001149330.1| 40S ribosomal protein S17-4 [Zea mays] gi|19... 63 5e-08
gb|EMT02584.1| hypothetical protein F775_52330 [Aegilops tauschii] 62 6e-08
ref|NP_001064585.1| Os10g0411800 [Oryza sativa Japonica Group] g... 62 6e-08
gb|EAZ16056.1| hypothetical protein OsJ_31497 [Oryza sativa Japo... 62 6e-08
ref|XP_004982825.1| PREDICTED: 40S ribosomal protein S17-3-like ... 62 8e-08
gb|ACN41123.1| unknown [Picea sitchensis] 61 1e-07
gb|ABK26893.1| unknown [Picea sitchensis] 61 1e-07
gb|ABK21036.1| unknown [Picea sitchensis] gi|116790181|gb|ABK255... 61 1e-07
gb|AEC10963.1| 40S ribosomal protein s17 [Camellia sinensis] 61 2e-07
ref|XP_004290525.1| PREDICTED: 40S ribosomal protein S17-4-like ... 60 2e-07
>ref|XP_006846451.1| hypothetical protein AMTR_s00018p00081410 [Amborella trichopoda]
gi|548849261|gb|ERN08126.1| hypothetical protein
AMTR_s00018p00081410 [Amborella trichopoda]
Length = 144
Score = 68.6 bits (166), Expect = 8e-10
Identities = 34/55 (61%), Positives = 41/55 (74%)
Frame = -1
Query: 215 ESAIKVDQIVVDKETIDMLASLGMADLPGVERQTEAPAAPAYSSRPGAGGYGGRR 51
ESAIK D I VDKET+DMLA+LGM DLPGV +Q+E + Y+ GAGG+GG R
Sbjct: 88 ESAIKTDVIEVDKETMDMLAALGMPDLPGVVKQSEPALSAPYAKPVGAGGFGGGR 142
>gb|ABK22422.1| unknown [Picea sitchensis]
Length = 145
Score = 67.4 bits (163), Expect = 2e-09
Identities = 35/53 (66%), Positives = 40/53 (75%)
Frame = -1
Query: 215 ESAIKVDQIVVDKETIDMLASLGMADLPGVERQTEAPAAPAYSSRPGAGGYGG 57
ESAIK+D I VDKET+DMLASLGMADLPGV +Q + PA + RPG G GG
Sbjct: 88 ESAIKIDVIEVDKETMDMLASLGMADLPGVVKQADPPAGGGF-MRPGGGYLGG 139
>ref|XP_004985262.1| PREDICTED: 40S ribosomal protein S17-4-like [Setaria italica]
Length = 143
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/50 (66%), Positives = 39/50 (78%)
Frame = -1
Query: 215 ESAIKVDQIVVDKETIDMLASLGMADLPGVERQTEAPAAPAYSSRPGAGG 66
+SA++VD I VDKET++MLA+LGMADLPGVERQ E APAY R GG
Sbjct: 88 KSALEVDAIRVDKETMEMLAALGMADLPGVERQPENTNAPAYGGRQQFGG 137
>gb|AFW85413.1| 40S ribosomal protein S17-4 [Zea mays]
Length = 142
Score = 64.7 bits (156), Expect = 1e-08
Identities = 33/50 (66%), Positives = 41/50 (82%)
Frame = -1
Query: 215 ESAIKVDQIVVDKETIDMLASLGMADLPGVERQTEAPAAPAYSSRPGAGG 66
+SA++V++I VDKET++MLA+LGMADLPGVERQ E APAY RP GG
Sbjct: 88 KSALEVEEIRVDKETMEMLAALGMADLPGVERQAEVSNAPAY-GRPQYGG 136
>emb|CBI25023.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 64.3 bits (155), Expect = 2e-08
Identities = 36/56 (64%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Frame = -1
Query: 215 ESAIKVDQIVVDKETIDMLASLGMADLPG-VERQTEAPAAPAYSSRPGAGGYGGRR 51
ESAIK D I VDKETIDML++LGMA+LPG VE + E A R GAGG GGRR
Sbjct: 114 ESAIKTDVIKVDKETIDMLSALGMAELPGVVETEPEVVAPAMVFGRGGAGGAGGRR 169
>ref|XP_002436652.1| hypothetical protein SORBIDRAFT_10g006620 [Sorghum bicolor]
gi|241914875|gb|EER88019.1| hypothetical protein
SORBIDRAFT_10g006620 [Sorghum bicolor]
Length = 142
Score = 64.3 bits (155), Expect = 2e-08
Identities = 33/50 (66%), Positives = 41/50 (82%)
Frame = -1
Query: 215 ESAIKVDQIVVDKETIDMLASLGMADLPGVERQTEAPAAPAYSSRPGAGG 66
+SA++V++I VDKET++MLA+LGMADLPGVERQ E APAY RP GG
Sbjct: 88 KSALEVEEIRVDKETMEMLAALGMADLPGVERQQEVSNAPAY-GRPQYGG 136
>gb|ACG48690.1| 40S ribosomal protein S17-4 [Zea mays]
Length = 142
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/50 (64%), Positives = 41/50 (82%)
Frame = -1
Query: 215 ESAIKVDQIVVDKETIDMLASLGMADLPGVERQTEAPAAPAYSSRPGAGG 66
+SA++V++I VDKET++MLA+LGMADLPGVERQ E + PAY RP GG
Sbjct: 88 KSALEVEEIRVDKETMEMLAALGMADLPGVERQAEVSSVPAY-GRPQYGG 136
>ref|NP_001132853.1| uncharacterized protein LOC100194345 [Zea mays]
gi|194695580|gb|ACF81874.1| unknown [Zea mays]
gi|413943990|gb|AFW76639.1| 40S ribosomal protein S17-4
[Zea mays]
Length = 142
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/50 (64%), Positives = 41/50 (82%)
Frame = -1
Query: 215 ESAIKVDQIVVDKETIDMLASLGMADLPGVERQTEAPAAPAYSSRPGAGG 66
+SA++V++I VDKET++MLA+LGMADLPGVERQ E + PAY RP GG
Sbjct: 88 KSALEVEEIRVDKETMEMLAALGMADLPGVERQAEVSSVPAY-GRPQYGG 136
>ref|XP_002268997.1| PREDICTED: 40S ribosomal protein S17 [Vitis vinifera]
gi|147835114|emb|CAN67946.1| hypothetical protein
VITISV_036770 [Vitis vinifera]
Length = 144
Score = 64.3 bits (155), Expect = 2e-08
Identities = 36/56 (64%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Frame = -1
Query: 215 ESAIKVDQIVVDKETIDMLASLGMADLPG-VERQTEAPAAPAYSSRPGAGGYGGRR 51
ESAIK D I VDKETIDML++LGMA+LPG VE + E A R GAGG GGRR
Sbjct: 88 ESAIKTDVIKVDKETIDMLSALGMAELPGVVETEPEVVAPAMVFGRGGAGGAGGRR 143
>gb|EMS65249.1| 40S ribosomal protein S17-4 [Triticum urartu]
Length = 143
Score = 63.9 bits (154), Expect = 2e-08
Identities = 34/55 (61%), Positives = 41/55 (74%)
Frame = -1
Query: 215 ESAIKVDQIVVDKETIDMLASLGMADLPGVERQTEAPAAPAYSSRPGAGGYGGRR 51
+SA++VD+I VDKET+DMLA LGMADLPGVER EA +A A +P G GG R
Sbjct: 88 KSALEVDEIRVDKETMDMLAFLGMADLPGVERAPEATSAAAPYRQPFNGPRGGNR 142
>ref|NP_001149330.1| 40S ribosomal protein S17-4 [Zea mays] gi|195626444|gb|ACG35052.1|
40S ribosomal protein S17-4 [Zea mays]
gi|195634707|gb|ACG36822.1| 40S ribosomal protein S17-4
[Zea mays]
Length = 142
Score = 62.8 bits (151), Expect = 5e-08
Identities = 32/50 (64%), Positives = 40/50 (80%)
Frame = -1
Query: 215 ESAIKVDQIVVDKETIDMLASLGMADLPGVERQTEAPAAPAYSSRPGAGG 66
+SA++V++I VDKET++MLA+LGMADLPGVERQ E AP Y RP GG
Sbjct: 88 KSALEVEEIRVDKETMEMLAALGMADLPGVERQAEVSNAPXY-GRPQYGG 136
>gb|EMT02584.1| hypothetical protein F775_52330 [Aegilops tauschii]
Length = 170
Score = 62.4 bits (150), Expect = 6e-08
Identities = 33/55 (60%), Positives = 40/55 (72%)
Frame = -1
Query: 215 ESAIKVDQIVVDKETIDMLASLGMADLPGVERQTEAPAAPAYSSRPGAGGYGGRR 51
+SA++VD+I VDKET+DMLA LGMADLPGVER E +A A +P G GG R
Sbjct: 88 KSALEVDEIRVDKETMDMLAFLGMADLPGVERAPETTSAAAPYRQPFNGPRGGNR 142
>ref|NP_001064585.1| Os10g0411800 [Oryza sativa Japonica Group] gi|582044883|pdb|3J60|R
Chain R, Localization Of The Small Subunit Ribosomal
Proteins Into A 5.5 A Cryo-em Map Of Triticum Aestivum
Translating 80s Ribosome gi|31432043|gb|AAP53735.1| 40S
ribosomal protein S17-4, putative, expressed [Oryza
sativa Japonica Group] gi|113639194|dbj|BAF26499.1|
Os10g0411800 [Oryza sativa Japonica Group]
gi|125531883|gb|EAY78448.1| hypothetical protein
OsI_33538 [Oryza sativa Indica Group]
Length = 141
Score = 62.4 bits (150), Expect = 6e-08
Identities = 34/55 (61%), Positives = 43/55 (78%)
Frame = -1
Query: 215 ESAIKVDQIVVDKETIDMLASLGMADLPGVERQTEAPAAPAYSSRPGAGGYGGRR 51
+SA++V++I VDKET++MLA+LGMADLPGVERQ E +AP YS P YGG R
Sbjct: 88 KSALEVEEIRVDKETMEMLAALGMADLPGVERQQEV-SAPTYSRPP----YGGPR 137
>gb|EAZ16056.1| hypothetical protein OsJ_31497 [Oryza sativa Japonica Group]
Length = 128
Score = 62.4 bits (150), Expect = 6e-08
Identities = 34/55 (61%), Positives = 43/55 (78%)
Frame = -1
Query: 215 ESAIKVDQIVVDKETIDMLASLGMADLPGVERQTEAPAAPAYSSRPGAGGYGGRR 51
+SA++V++I VDKET++MLA+LGMADLPGVERQ E +AP YS P YGG R
Sbjct: 75 KSALEVEEIRVDKETMEMLAALGMADLPGVERQQEV-SAPTYSRPP----YGGPR 124
>ref|XP_004982825.1| PREDICTED: 40S ribosomal protein S17-3-like [Setaria italica]
Length = 142
Score = 62.0 bits (149), Expect = 8e-08
Identities = 33/50 (66%), Positives = 40/50 (80%)
Frame = -1
Query: 215 ESAIKVDQIVVDKETIDMLASLGMADLPGVERQTEAPAAPAYSSRPGAGG 66
+SA++VDQI VDKET++MLA+LGMADLPGVE Q E APA+ RP GG
Sbjct: 88 KSALEVDQIRVDKETMEMLAALGMADLPGVELQPENSNAPAF-GRPQYGG 136
>gb|ACN41123.1| unknown [Picea sitchensis]
Length = 146
Score = 61.2 bits (147), Expect = 1e-07
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Frame = -1
Query: 215 ESAIKVDQIVVDKETIDMLASLGMADLPGVERQTEAPAAPAYSSRPG---AGGYGGRR 51
ESAIK + I VDKET+DMLASLGM+DLPGV +Q + PA +PG GG GRR
Sbjct: 88 ESAIKTEVIEVDKETMDMLASLGMSDLPGVVKQADPPAGGGGFIKPGGFQGGGGMGRR 145
>gb|ABK26893.1| unknown [Picea sitchensis]
Length = 89
Score = 61.2 bits (147), Expect = 1e-07
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Frame = -1
Query: 215 ESAIKVDQIVVDKETIDMLASLGMADLPGVERQTEAPAAPAYSSRPG---AGGYGGRR 51
ESAIK + I VDKET+DMLASLGM+DLPGV +Q + PA +PG GG GRR
Sbjct: 31 ESAIKTEVIEVDKETMDMLASLGMSDLPGVVKQADPPAGGGGFIKPGGFQGGGGMGRR 88
>gb|ABK21036.1| unknown [Picea sitchensis] gi|116790181|gb|ABK25531.1| unknown
[Picea sitchensis] gi|116793494|gb|ABK26768.1| unknown
[Picea sitchensis] gi|148905787|gb|ABR16057.1| unknown
[Picea sitchensis] gi|224285099|gb|ACN40277.1| unknown
[Picea sitchensis]
Length = 146
Score = 61.2 bits (147), Expect = 1e-07
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Frame = -1
Query: 215 ESAIKVDQIVVDKETIDMLASLGMADLPGVERQTEAPAAPAYSSRPG---AGGYGGRR 51
ESAIK + I VDKET+DMLASLGM+DLPGV +Q + PA +PG GG GRR
Sbjct: 88 ESAIKTEVIEVDKETMDMLASLGMSDLPGVVKQADPPAGGGGFIKPGGFQGGGGMGRR 145
>gb|AEC10963.1| 40S ribosomal protein s17 [Camellia sinensis]
Length = 149
Score = 60.8 bits (146), Expect = 2e-07
Identities = 34/57 (59%), Positives = 40/57 (70%), Gaps = 4/57 (7%)
Frame = -1
Query: 215 ESAIKVDQIVVDKETIDMLASLGMADLPGVERQTE----APAAPAYSSRPGAGGYGG 57
ESAIK D I VDKETID+LASLGM+++PGV + E APA P Y G GG+GG
Sbjct: 88 ESAIKTDHIEVDKETIDLLASLGMSEMPGVVLKEEIGVFAPAIPPYGGGRG-GGFGG 143
>ref|XP_004290525.1| PREDICTED: 40S ribosomal protein S17-4-like [Fragaria vesca subsp.
vesca]
Length = 138
Score = 60.5 bits (145), Expect = 2e-07
Identities = 30/51 (58%), Positives = 34/51 (66%)
Frame = -1
Query: 215 ESAIKVDQIVVDKETIDMLASLGMADLPGVERQTEAPAAPAYSSRPGAGGY 63
ESAIK D I VDKET+DML +LGMAD+PG+ TE AAP R G Y
Sbjct: 88 ESAIKTDDIAVDKETLDMLTALGMADIPGLRESTELQAAPVGYGRGGPRRY 138