BLASTX nr result
ID: Zingiber23_contig00010974
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00010974
(235 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001061515.1| Os08g0314800 [Oryza sativa Japonica Group] g... 136 3e-30
gb|AAQ56342.1| putative poly(A)-binding protein [Oryza sativa Ja... 136 3e-30
dbj|BAJ97269.1| predicted protein [Hordeum vulgare subsp. vulgare] 134 1e-29
dbj|BAJ90169.1| predicted protein [Hordeum vulgare subsp. vulgar... 134 1e-29
ref|XP_006659302.1| PREDICTED: polyadenylate-binding protein 8-l... 133 2e-29
gb|EMT11582.1| Polyadenylate-binding protein 2 [Aegilops tauschii] 133 2e-29
ref|NP_001062583.1| Os09g0115400 [Oryza sativa Japonica Group] g... 133 3e-29
ref|XP_003573691.1| PREDICTED: polyadenylate-binding protein 2-l... 132 4e-29
ref|XP_006661030.1| PREDICTED: polyadenylate-binding protein 8-l... 131 8e-29
gb|EMS55649.1| Polyadenylate-binding protein 2 [Triticum urartu] 130 2e-28
gb|AAB38974.1| poly(A)-binding protein [Triticum aestivum] 130 2e-28
ref|XP_003576878.1| PREDICTED: polyadenylate-binding protein 2-l... 130 2e-28
ref|XP_004956317.1| PREDICTED: polyadenylate-binding protein 2-l... 129 3e-28
ref|XP_003603074.1| Poly(A)-binding protein [Medicago truncatula... 129 5e-28
gb|ACJ85797.1| unknown [Medicago truncatula] 129 5e-28
dbj|BAJ96406.1| predicted protein [Hordeum vulgare subsp. vulgare] 128 7e-28
ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-l... 128 9e-28
ref|XP_006342637.1| PREDICTED: polyadenylate-binding protein 8-l... 127 1e-27
ref|XP_004252758.1| PREDICTED: polyadenylate-binding protein 2-l... 127 1e-27
ref|XP_003580095.1| PREDICTED: polyadenylate-binding protein 2-l... 127 1e-27
>ref|NP_001061515.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|35215045|dbj|BAC92404.1| putative
polyadenylate-binding protein [Oryza sativa Japonica
Group] gi|35215184|dbj|BAC92537.1| putative
polyadenylate-binding protein [Oryza sativa Japonica
Group] gi|113623484|dbj|BAF23429.1| Os08g0314800 [Oryza
sativa Japonica Group] gi|215694402|dbj|BAG89395.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|258644698|dbj|BAI39945.1| putative poly(A)-binding
protein [Oryza sativa Indica Group]
Length = 660
Score = 136 bits (343), Expect = 3e-30
Identities = 64/76 (84%), Positives = 73/76 (96%)
Frame = +3
Query: 3 YVNFSDPADAAKAIEILNFTPLNGKAIRLMYSNRDPNMRRSGAANIFIKNLDKTIDNKAL 182
YVNFS PADAA+A+E+LNFTP+NGK IR+MYSNRDP+ R+SGAANIFIKNLDK+IDNKAL
Sbjct: 84 YVNFSSPADAARALEMLNFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKAL 143
Query: 183 YDTFSVFGSILSCKVA 230
YDTFSVFG+ILSCKVA
Sbjct: 144 YDTFSVFGNILSCKVA 159
>gb|AAQ56342.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|125561054|gb|EAZ06502.1| hypothetical protein
OsI_28747 [Oryza sativa Indica Group]
gi|125602953|gb|EAZ42278.1| hypothetical protein
OsJ_26851 [Oryza sativa Japonica Group]
Length = 456
Score = 136 bits (343), Expect = 3e-30
Identities = 64/76 (84%), Positives = 73/76 (96%)
Frame = +3
Query: 3 YVNFSDPADAAKAIEILNFTPLNGKAIRLMYSNRDPNMRRSGAANIFIKNLDKTIDNKAL 182
YVNFS PADAA+A+E+LNFTP+NGK IR+MYSNRDP+ R+SGAANIFIKNLDK+IDNKAL
Sbjct: 84 YVNFSSPADAARALEMLNFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKAL 143
Query: 183 YDTFSVFGSILSCKVA 230
YDTFSVFG+ILSCKVA
Sbjct: 144 YDTFSVFGNILSCKVA 159
>dbj|BAJ97269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 134 bits (338), Expect = 1e-29
Identities = 63/76 (82%), Positives = 72/76 (94%)
Frame = +3
Query: 3 YVNFSDPADAAKAIEILNFTPLNGKAIRLMYSNRDPNMRRSGAANIFIKNLDKTIDNKAL 182
YVNFS PADAA+A+E+LNFTP+NGK IR+MYSNRDP+ R+SGAANIFIKNLDK+IDNKAL
Sbjct: 87 YVNFSSPADAARALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKAL 146
Query: 183 YDTFSVFGSILSCKVA 230
YDTFS FG+ILSCKVA
Sbjct: 147 YDTFSAFGNILSCKVA 162
>dbj|BAJ90169.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511122|dbj|BAJ87575.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 663
Score = 134 bits (338), Expect = 1e-29
Identities = 63/76 (82%), Positives = 72/76 (94%)
Frame = +3
Query: 3 YVNFSDPADAAKAIEILNFTPLNGKAIRLMYSNRDPNMRRSGAANIFIKNLDKTIDNKAL 182
YVNFS PADAA+A+E+LNFTP+NGK IR+MYSNRDP+ R+SGAANIFIKNLDK+IDNKAL
Sbjct: 87 YVNFSSPADAARALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKAL 146
Query: 183 YDTFSVFGSILSCKVA 230
YDTFS FG+ILSCKVA
Sbjct: 147 YDTFSAFGNILSCKVA 162
>ref|XP_006659302.1| PREDICTED: polyadenylate-binding protein 8-like [Oryza brachyantha]
Length = 659
Score = 133 bits (335), Expect = 2e-29
Identities = 62/76 (81%), Positives = 73/76 (96%)
Frame = +3
Query: 3 YVNFSDPADAAKAIEILNFTPLNGKAIRLMYSNRDPNMRRSGAANIFIKNLDKTIDNKAL 182
YVNFS PADAA+A+++LNFTP+NGK IR+MYSNRDP+ R+SGAANIFIKNLDK+IDNKAL
Sbjct: 84 YVNFSSPADAARALDMLNFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKAL 143
Query: 183 YDTFSVFGSILSCKVA 230
+DTFSVFG+ILSCKVA
Sbjct: 144 HDTFSVFGNILSCKVA 159
>gb|EMT11582.1| Polyadenylate-binding protein 2 [Aegilops tauschii]
Length = 433
Score = 133 bits (335), Expect = 2e-29
Identities = 63/76 (82%), Positives = 72/76 (94%)
Frame = +3
Query: 3 YVNFSDPADAAKAIEILNFTPLNGKAIRLMYSNRDPNMRRSGAANIFIKNLDKTIDNKAL 182
YVNFS PADAA+A+E+LNFTP+NGK IR+MYSNRDP+ R+SGAANIFIKNLDK+IDNKAL
Sbjct: 62 YVNFSIPADAARALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKAL 121
Query: 183 YDTFSVFGSILSCKVA 230
YDTFS FG+ILSCKVA
Sbjct: 122 YDTFSAFGNILSCKVA 137
>ref|NP_001062583.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|46389987|dbj|BAD16229.1| putative poly(A)-binding
protein [Oryza sativa Japonica Group]
gi|113630816|dbj|BAF24497.1| Os09g0115400 [Oryza sativa
Japonica Group] gi|125562753|gb|EAZ08133.1| hypothetical
protein OsI_30396 [Oryza sativa Indica Group]
gi|125604734|gb|EAZ43770.1| hypothetical protein
OsJ_28392 [Oryza sativa Japonica Group]
gi|169244485|gb|ACA50516.1| poly(A)-binding protein
[Oryza sativa Japonica Group]
gi|215695451|dbj|BAG90618.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 662
Score = 133 bits (334), Expect = 3e-29
Identities = 61/76 (80%), Positives = 72/76 (94%)
Frame = +3
Query: 3 YVNFSDPADAAKAIEILNFTPLNGKAIRLMYSNRDPNMRRSGAANIFIKNLDKTIDNKAL 182
YVN+S PADAA+A+E+LNFTP+NGK IR+MYSNRDP++R+SG ANIFIKNLDK+IDNKAL
Sbjct: 85 YVNYSSPADAARALEMLNFTPINGKPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKAL 144
Query: 183 YDTFSVFGSILSCKVA 230
YDTF VFG+ILSCKVA
Sbjct: 145 YDTFCVFGNILSCKVA 160
>ref|XP_003573691.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 663
Score = 132 bits (333), Expect = 4e-29
Identities = 62/76 (81%), Positives = 72/76 (94%)
Frame = +3
Query: 3 YVNFSDPADAAKAIEILNFTPLNGKAIRLMYSNRDPNMRRSGAANIFIKNLDKTIDNKAL 182
YVNFS PADAA+A+E+LNFTP+NGK IR+MYSNRDP+ R+SGAANIFIKNLDK+IDNKAL
Sbjct: 87 YVNFSSPADAARAMEMLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKAL 146
Query: 183 YDTFSVFGSILSCKVA 230
+DTFS FG+ILSCKVA
Sbjct: 147 FDTFSAFGTILSCKVA 162
>ref|XP_006661030.1| PREDICTED: polyadenylate-binding protein 8-like, partial [Oryza
brachyantha]
Length = 627
Score = 131 bits (330), Expect = 8e-29
Identities = 61/76 (80%), Positives = 72/76 (94%)
Frame = +3
Query: 3 YVNFSDPADAAKAIEILNFTPLNGKAIRLMYSNRDPNMRRSGAANIFIKNLDKTIDNKAL 182
YVN+S PADAA+A+E+LNFTP+NGK IR+MYSNRDP++R+SGAANIFIKNLDK+IDNKAL
Sbjct: 50 YVNYSSPADAARALEMLNFTPINGKPIRIMYSNRDPSLRKSGAANIFIKNLDKSIDNKAL 109
Query: 183 YDTFSVFGSILSCKVA 230
DTF VFG+ILSCKVA
Sbjct: 110 QDTFCVFGNILSCKVA 125
>gb|EMS55649.1| Polyadenylate-binding protein 2 [Triticum urartu]
Length = 625
Score = 130 bits (327), Expect = 2e-28
Identities = 59/76 (77%), Positives = 72/76 (94%)
Frame = +3
Query: 3 YVNFSDPADAAKAIEILNFTPLNGKAIRLMYSNRDPNMRRSGAANIFIKNLDKTIDNKAL 182
YVN++ PADAA+A+E+LNFTP+NG+ IR+MYSNRDP++R+SG ANIFIKNLDK+IDNKAL
Sbjct: 51 YVNYNTPADAARALEMLNFTPINGRPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKAL 110
Query: 183 YDTFSVFGSILSCKVA 230
YDTF VFG+ILSCKVA
Sbjct: 111 YDTFCVFGNILSCKVA 126
>gb|AAB38974.1| poly(A)-binding protein [Triticum aestivum]
Length = 651
Score = 130 bits (327), Expect = 2e-28
Identities = 59/76 (77%), Positives = 72/76 (94%)
Frame = +3
Query: 3 YVNFSDPADAAKAIEILNFTPLNGKAIRLMYSNRDPNMRRSGAANIFIKNLDKTIDNKAL 182
YVN++ PADAA+A+E+LNFTP+NG+ IR+MYSNRDP++R+SG ANIFIKNLDK+IDNKAL
Sbjct: 77 YVNYNTPADAARALEMLNFTPINGRPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKAL 136
Query: 183 YDTFSVFGSILSCKVA 230
YDTF VFG+ILSCKVA
Sbjct: 137 YDTFCVFGNILSCKVA 152
>ref|XP_003576878.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 653
Score = 130 bits (327), Expect = 2e-28
Identities = 59/76 (77%), Positives = 72/76 (94%)
Frame = +3
Query: 3 YVNFSDPADAAKAIEILNFTPLNGKAIRLMYSNRDPNMRRSGAANIFIKNLDKTIDNKAL 182
YVN++ PADAA+A+E+LNFTP+NG+ IR+MYSNRDP++R+SG ANIFIKNLDK+IDNKAL
Sbjct: 79 YVNYNTPADAARALEMLNFTPINGRPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKAL 138
Query: 183 YDTFSVFGSILSCKVA 230
YDTF VFG+ILSCKVA
Sbjct: 139 YDTFCVFGNILSCKVA 154
>ref|XP_004956317.1| PREDICTED: polyadenylate-binding protein 2-like [Setaria italica]
Length = 664
Score = 129 bits (325), Expect = 3e-28
Identities = 58/76 (76%), Positives = 71/76 (93%)
Frame = +3
Query: 3 YVNFSDPADAAKAIEILNFTPLNGKAIRLMYSNRDPNMRRSGAANIFIKNLDKTIDNKAL 182
YVN+++PADAA+A+E+LNFTP+NGK IR+MYSNRDP+ R+SGA NIFIKNLDK+IDNKAL
Sbjct: 87 YVNYNNPADAARALELLNFTPINGKPIRIMYSNRDPSSRKSGAGNIFIKNLDKSIDNKAL 146
Query: 183 YDTFSVFGSILSCKVA 230
YDTF FG+ILSCK+A
Sbjct: 147 YDTFCAFGNILSCKIA 162
>ref|XP_003603074.1| Poly(A)-binding protein [Medicago truncatula]
gi|355492122|gb|AES73325.1| Poly(A)-binding protein
[Medicago truncatula]
Length = 622
Score = 129 bits (323), Expect = 5e-28
Identities = 58/77 (75%), Positives = 73/77 (94%)
Frame = +3
Query: 3 YVNFSDPADAAKAIEILNFTPLNGKAIRLMYSNRDPNMRRSGAANIFIKNLDKTIDNKAL 182
YVNFS+P DAAKA+++LNFTPLN K IR+MYS+RDP++R+SGAANIFIKNLD+ ID+KAL
Sbjct: 69 YVNFSNPHDAAKAMDVLNFTPLNNKPIRIMYSHRDPSVRKSGAANIFIKNLDRAIDHKAL 128
Query: 183 YDTFSVFGSILSCKVAL 233
YDTFS+FG+ILSCK+A+
Sbjct: 129 YDTFSIFGNILSCKIAM 145
>gb|ACJ85797.1| unknown [Medicago truncatula]
Length = 494
Score = 129 bits (323), Expect = 5e-28
Identities = 58/77 (75%), Positives = 73/77 (94%)
Frame = +3
Query: 3 YVNFSDPADAAKAIEILNFTPLNGKAIRLMYSNRDPNMRRSGAANIFIKNLDKTIDNKAL 182
YVNFS+P DAAKA+++LNFTPLN K IR+MYS+RDP++R+SGAANIFIKNLD+ ID+KAL
Sbjct: 69 YVNFSNPHDAAKAMDVLNFTPLNNKPIRIMYSHRDPSVRKSGAANIFIKNLDRAIDHKAL 128
Query: 183 YDTFSVFGSILSCKVAL 233
YDTFS+FG+ILSCK+A+
Sbjct: 129 YDTFSIFGNILSCKIAM 145
>dbj|BAJ96406.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 744
Score = 128 bits (322), Expect = 7e-28
Identities = 58/76 (76%), Positives = 72/76 (94%)
Frame = +3
Query: 3 YVNFSDPADAAKAIEILNFTPLNGKAIRLMYSNRDPNMRRSGAANIFIKNLDKTIDNKAL 182
YVN++ PADAA+A+E+LNFTP+NG+ IR+MYSNRDP++R+SG ANIFIKNLDK+IDNKAL
Sbjct: 170 YVNYNTPADAARALEMLNFTPINGRPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKAL 229
Query: 183 YDTFSVFGSILSCKVA 230
+DTF VFG+ILSCKVA
Sbjct: 230 HDTFCVFGNILSCKVA 245
>ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 654
Score = 128 bits (321), Expect = 9e-28
Identities = 59/77 (76%), Positives = 72/77 (93%)
Frame = +3
Query: 3 YVNFSDPADAAKAIEILNFTPLNGKAIRLMYSNRDPNMRRSGAANIFIKNLDKTIDNKAL 182
YVN+S+P DAA+A+++LNFTPLNGK IR+MYS+RDP++R+SGA NIFIKNLDK ID+KAL
Sbjct: 74 YVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIFIKNLDKAIDHKAL 133
Query: 183 YDTFSVFGSILSCKVAL 233
+DTFS FGSILSCKVAL
Sbjct: 134 HDTFSAFGSILSCKVAL 150
>ref|XP_006342637.1| PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum]
Length = 665
Score = 127 bits (320), Expect = 1e-27
Identities = 57/76 (75%), Positives = 74/76 (97%)
Frame = +3
Query: 3 YVNFSDPADAAKAIEILNFTPLNGKAIRLMYSNRDPNMRRSGAANIFIKNLDKTIDNKAL 182
YVN+S+P+DAA+A+E+LNFTP+NGK+IR+MYS+RDP +R+SG+ANIFIKNLDK+IDNKAL
Sbjct: 90 YVNYSNPSDAARAMELLNFTPVNGKSIRVMYSHRDPTLRKSGSANIFIKNLDKSIDNKAL 149
Query: 183 YDTFSVFGSILSCKVA 230
+DTFS FG+ILSCK+A
Sbjct: 150 HDTFSSFGNILSCKIA 165
>ref|XP_004252758.1| PREDICTED: polyadenylate-binding protein 2-like [Solanum
lycopersicum]
Length = 666
Score = 127 bits (320), Expect = 1e-27
Identities = 57/76 (75%), Positives = 74/76 (97%)
Frame = +3
Query: 3 YVNFSDPADAAKAIEILNFTPLNGKAIRLMYSNRDPNMRRSGAANIFIKNLDKTIDNKAL 182
YVN+S+P+DAA+A+E+LNFTP+NGK+IR+MYS+RDP +R+SG+ANIFIKNLDK+IDNKAL
Sbjct: 90 YVNYSNPSDAARAMELLNFTPVNGKSIRVMYSHRDPTLRKSGSANIFIKNLDKSIDNKAL 149
Query: 183 YDTFSVFGSILSCKVA 230
+DTFS FG+ILSCK+A
Sbjct: 150 HDTFSSFGNILSCKIA 165
>ref|XP_003580095.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 661
Score = 127 bits (320), Expect = 1e-27
Identities = 60/76 (78%), Positives = 69/76 (90%)
Frame = +3
Query: 3 YVNFSDPADAAKAIEILNFTPLNGKAIRLMYSNRDPNMRRSGAANIFIKNLDKTIDNKAL 182
YVNFS+P DAA+A+E+LNF PLN K IR+MYSNRDP+ RRSG+ANIFIKNLDKTIDNK L
Sbjct: 82 YVNFSNPMDAARALEMLNFVPLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNKTL 141
Query: 183 YDTFSVFGSILSCKVA 230
+DTFS FG+ILSCKVA
Sbjct: 142 HDTFSAFGAILSCKVA 157