BLASTX nr result

ID: Zingiber23_contig00010638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00010638
         (664 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002452984.1| hypothetical protein SORBIDRAFT_04g036070 [S...    66   8e-09

>ref|XP_002452984.1| hypothetical protein SORBIDRAFT_04g036070 [Sorghum bicolor]
           gi|241932815|gb|EES05960.1| hypothetical protein
           SORBIDRAFT_04g036070 [Sorghum bicolor]
          Length = 212

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 54/169 (31%), Positives = 68/169 (40%), Gaps = 12/169 (7%)
 Frame = -2

Query: 621 MATAVLRSQDCLRNQRHLDAFGPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 442
           MATAVLRS D L N+ HLDA+ PS                                    
Sbjct: 1   MATAVLRSHDALNNRMHLDAYTPSPAKPRRRRSPKPAAASSPPARAAAPIASTKPAAVQ- 59

Query: 441 XXXXXXXXXXXAVKSGQSGNAPLDPRRSTPLRTDGRVLEGEPRPRKP-----LVMQEVRI 277
                        K+     AP+ P R +P          +P P K      LVM+EVRI
Sbjct: 60  -------------KAVTPAKAPVAPGRRSPPARPAASSRKQPSPTKEKSKQRLVMEEVRI 106

Query: 276 LKRGEDP------RLAVFPTFDLRSEVDSSILCSTDRLGPE-PQVLPKK 151
           LKRGE+P       +   P   L + VD  +LCST R+GP+ P V+P K
Sbjct: 107 LKRGEEPPAPAPAPVLAVPPVALAAAVDQRVLCSTGRIGPQAPAVVPTK 155


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