BLASTX nr result
ID: Zingiber23_contig00010618
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00010618
(362 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFS65104.1| 40S ribosomal protein S3a-like protein [Elaeis gu... 67 3e-09
gb|AAZ99673.1| 40s ribosomal protein S3 [Cymbidium faberi] 65 7e-09
gb|ABK56834.1| RPS3 [Cymbidium hybrid cultivar] 65 7e-09
ref|XP_006848758.1| hypothetical protein AMTR_s00026p00042160 [A... 61 2e-07
gb|EOY11117.1| Ribosomal protein S3Ae [Theobroma cacao] 59 9e-07
sp|Q9MBB3.1|RS3A_DAUCA RecName: Full=40S ribosomal protein S3a; ... 58 1e-06
ref|XP_006838990.1| hypothetical protein AMTR_s00002p00271660 [A... 57 3e-06
gb|AAV92214.1| 40S ribosomal protein S3a [Pseudotsuga menziesii ... 57 3e-06
ref|XP_004134125.1| PREDICTED: 40S ribosomal protein S3a-like [C... 56 6e-06
gb|AGZ15363.1| 40S ribosomal protein S3a-like protein [Phaseolus... 55 1e-05
gb|AAX55706.1| cyc07 [Vitis vinifera] 55 1e-05
ref|NP_001275123.1| cyc07-like protein [Solanum tuberosum] gi|82... 55 1e-05
gb|ABB72808.1| cyc07-like protein [Solanum tuberosum] 55 1e-05
gb|ABB55362.1| cyc07-like [Solanum tuberosum] gi|82400152|gb|ABB... 55 1e-05
ref|NP_001274913.1| 40S ribosomal protein S3a-like [Solanum tube... 55 1e-05
ref|XP_002277791.1| PREDICTED: 40S ribosomal protein S3a-1 [Viti... 55 1e-05
>gb|AFS65104.1| 40S ribosomal protein S3a-like protein [Elaeis guineensis]
Length = 261
Score = 66.6 bits (161), Expect = 3e-09
Identities = 30/35 (85%), Positives = 33/35 (94%)
Frame = +3
Query: 3 KLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 107
KLMEVHGDYKEDVGVK++RPA+DVPMEGE E VGA
Sbjct: 227 KLMEVHGDYKEDVGVKIDRPADDVPMEGEPEVVGA 261
>gb|AAZ99673.1| 40s ribosomal protein S3 [Cymbidium faberi]
Length = 71
Score = 65.5 bits (158), Expect = 7e-09
Identities = 30/35 (85%), Positives = 32/35 (91%)
Frame = +3
Query: 3 KLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 107
KLMEVHGDYKED GVKL+RP EDVP+EGEAE VGA
Sbjct: 37 KLMEVHGDYKEDFGVKLDRPGEDVPVEGEAEVVGA 71
>gb|ABK56834.1| RPS3 [Cymbidium hybrid cultivar]
Length = 261
Score = 65.5 bits (158), Expect = 7e-09
Identities = 30/35 (85%), Positives = 32/35 (91%)
Frame = +3
Query: 3 KLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 107
KLMEVHGDYKED GVKL+RP EDVP+EGEAE VGA
Sbjct: 227 KLMEVHGDYKEDFGVKLDRPGEDVPVEGEAEVVGA 261
>ref|XP_006848758.1| hypothetical protein AMTR_s00026p00042160 [Amborella trichopoda]
gi|548852191|gb|ERN10339.1| hypothetical protein
AMTR_s00026p00042160 [Amborella trichopoda]
Length = 261
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/35 (77%), Positives = 31/35 (88%)
Frame = +3
Query: 3 KLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 107
KLMEVHGDY +DVGVK++RPAEDVP+EG E VGA
Sbjct: 227 KLMEVHGDYSDDVGVKVDRPAEDVPLEGVTEVVGA 261
>gb|EOY11117.1| Ribosomal protein S3Ae [Theobroma cacao]
Length = 261
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = +3
Query: 3 KLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 107
KLMEVHGDY EDVGVKLERPA++ EGE E VGA
Sbjct: 227 KLMEVHGDYSEDVGVKLERPADETTAEGETEVVGA 261
>sp|Q9MBB3.1|RS3A_DAUCA RecName: Full=40S ribosomal protein S3a; AltName: Full=Protein
cyc07 gi|6714564|dbj|BAA89498.1| cyc07 [Daucus carota]
Length = 261
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = +3
Query: 3 KLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 107
KLMEVHGDY EDVGVKLERP E+ +EGE E VGA
Sbjct: 227 KLMEVHGDYSEDVGVKLERPIEETMVEGETEVVGA 261
>ref|XP_006838990.1| hypothetical protein AMTR_s00002p00271660 [Amborella trichopoda]
gi|548841496|gb|ERN01559.1| hypothetical protein
AMTR_s00002p00271660 [Amborella trichopoda]
Length = 265
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +3
Query: 3 KLMEVHGDYKEDVGVKLERPAEDVPMEGEAE 95
KLMEVHGDY +DVGVK+ERPAEDV M+GE E
Sbjct: 232 KLMEVHGDYSDDVGVKVERPAEDVAMDGETE 262
>gb|AAV92214.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481169|gb|AAV92215.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481171|gb|AAV92216.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481173|gb|AAV92217.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481175|gb|AAV92218.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481177|gb|AAV92219.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481179|gb|AAV92220.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481181|gb|AAV92221.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481183|gb|AAV92222.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481185|gb|AAV92223.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481187|gb|AAV92224.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481189|gb|AAV92225.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481191|gb|AAV92226.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481193|gb|AAV92227.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481195|gb|AAV92228.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481197|gb|AAV92229.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481199|gb|AAV92230.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481201|gb|AAV92231.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481203|gb|AAV92232.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481205|gb|AAV92233.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481207|gb|AAV92234.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481209|gb|AAV92235.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481211|gb|AAV92236.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481213|gb|AAV92237.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481215|gb|AAV92238.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481217|gb|AAV92239.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481219|gb|AAV92240.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481221|gb|AAV92241.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
Length = 57
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +3
Query: 3 KLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 107
KLMEVHGDY EDVGVK++RP ++VP E E E VGA
Sbjct: 23 KLMEVHGDYSEDVGVKVDRPVDEVPAEAETELVGA 57
>ref|XP_004134125.1| PREDICTED: 40S ribosomal protein S3a-like [Cucumis sativus]
gi|449518719|ref|XP_004166384.1| PREDICTED: 40S
ribosomal protein S3a-like [Cucumis sativus]
Length = 261
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +3
Query: 3 KLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 107
KLMEVHGDY EDVGVK+ERPA++ +EG E VGA
Sbjct: 227 KLMEVHGDYSEDVGVKVERPADETAVEGATEVVGA 261
>gb|AGZ15363.1| 40S ribosomal protein S3a-like protein [Phaseolus vulgaris]
gi|561030532|gb|ESW29111.1| hypothetical protein
PHAVU_002G044200g [Phaseolus vulgaris]
Length = 261
Score = 55.1 bits (131), Expect = 1e-05
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +3
Query: 3 KLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 107
KLMEVHGDY EDVG K+ERPAE+ +EG E VGA
Sbjct: 227 KLMEVHGDYSEDVGTKVERPAEETVVEGATEVVGA 261
>gb|AAX55706.1| cyc07 [Vitis vinifera]
Length = 237
Score = 55.1 bits (131), Expect = 1e-05
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = +3
Query: 3 KLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 107
KLMEVHGDY EDVGVK+ERPAE+ E E E VGA
Sbjct: 203 KLMEVHGDYSEDVGVKMERPAEETVAEVETEVVGA 237
>ref|NP_001275123.1| cyc07-like protein [Solanum tuberosum] gi|82623437|gb|ABB87133.1|
40S ribosomal protein S3a-like [Solanum tuberosum]
Length = 261
Score = 55.1 bits (131), Expect = 1e-05
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = +3
Query: 3 KLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 107
KLMEVHGDY EDVGVKL+RPAE+ E EAE GA
Sbjct: 227 KLMEVHGDYSEDVGVKLDRPAEETVAEAEAEVPGA 261
>gb|ABB72808.1| cyc07-like protein [Solanum tuberosum]
Length = 260
Score = 55.1 bits (131), Expect = 1e-05
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = +3
Query: 3 KLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 107
KLMEVHGDY EDVGVKL+RPAE+ E EAE GA
Sbjct: 226 KLMEVHGDYSEDVGVKLDRPAEETVAEAEAEVPGA 260
>gb|ABB55362.1| cyc07-like [Solanum tuberosum] gi|82400152|gb|ABB72815.1|
cyc07-like protein [Solanum tuberosum]
Length = 261
Score = 55.1 bits (131), Expect = 1e-05
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = +3
Query: 3 KLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 107
KLMEVHGDY EDVGVKL+RPAE+ E EAE GA
Sbjct: 227 KLMEVHGDYSEDVGVKLDRPAEETVAEAEAEVPGA 261
>ref|NP_001274913.1| 40S ribosomal protein S3a-like [Solanum tuberosum]
gi|81074465|gb|ABB55367.1| cyc07-like [Solanum
tuberosum] gi|82400110|gb|ABB72794.1| cyc07-like protein
[Solanum tuberosum]
Length = 261
Score = 55.1 bits (131), Expect = 1e-05
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = +3
Query: 3 KLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 107
KLMEVHGDY EDVGVKL+RPAE+ E EAE GA
Sbjct: 227 KLMEVHGDYSEDVGVKLDRPAEETVAEAEAEVPGA 261
>ref|XP_002277791.1| PREDICTED: 40S ribosomal protein S3a-1 [Vitis vinifera]
Length = 261
Score = 55.1 bits (131), Expect = 1e-05
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = +3
Query: 3 KLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 107
KLMEVHGDY EDVGVK+ERPAE+ E E E VGA
Sbjct: 227 KLMEVHGDYSEDVGVKMERPAEETVAEVETEVVGA 261