BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00010509
         (1099 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004975516.1| PREDICTED: DNA repair helicase XPB1-like [Se...   602   e-170
gb|EEE55219.1| hypothetical protein OsJ_03086 [Oryza sativa Japo...   598   e-169
gb|EEC71313.1| hypothetical protein OsI_03346 [Oryza sativa Indi...   598   e-169
ref|NP_001043936.1| Os01g0691600 [Oryza sativa Japonica Group] g...   598   e-169
ref|XP_006663357.1| PREDICTED: DNA repair helicase XPB1-like [Or...   598   e-168
tpg|DAA58033.1| TPA: hypothetical protein ZEAMMB73_851798 [Zea m...   595   e-168
tpg|DAA58032.1| TPA: hypothetical protein ZEAMMB73_851798 [Zea m...   595   e-168
ref|XP_003569596.1| PREDICTED: DNA repair helicase XPB2-like [Br...   595   e-167
ref|XP_002456182.1| hypothetical protein SORBIDRAFT_03g031750 [S...   589   e-166
gb|EOY24804.1| Xeroderma pigmentosum complementation group B 2 i...   586   e-165
gb|EOY24803.1| Xeroderma pigmentosum complementation group B 2 i...   586   e-165
gb|EOY24802.1| Xeroderma pigmentosum complementation group B 1 i...   586   e-165
ref|XP_006368763.1| hypothetical protein POPTR_0001s09670g [Popu...   584   e-164
ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vi...   583   e-164
dbj|BAJ96793.1| predicted protein [Hordeum vulgare subsp. vulgare]    580   e-163
ref|XP_006343950.1| PREDICTED: DNA repair helicase XPB1-like [So...   578   e-162
ref|XP_004245582.1| PREDICTED: DNA repair helicase XPB1-like [So...   577   e-162
ref|XP_002870639.1| predicted protein [Arabidopsis lyrata subsp....   577   e-162
ref|XP_006368764.1| hypothetical protein POPTR_0001s09670g [Popu...   576   e-162
ref|XP_002299520.2| DNA repair protein and transcription factor ...   576   e-162

>ref|XP_004975516.1| PREDICTED: DNA repair helicase XPB1-like [Setaria italica]
          Length = 765

 Score =  602 bits (1552), Expect = e-170
 Identities = 305/378 (80%), Positives = 323/378 (85%), Gaps = 15/378 (3%)
 Frame = +3

Query: 9    EIKKRDFTQLELKPDHVNRPLWACADGRIILETFSPLYKQAYDFLIAIAEPVCRPESMHE 188
            E+KKRDFT+LELKPDH NRPLWACADGRI LETFSPLYKQAYDFLIAIAEPVCRPESMHE
Sbjct: 48   EVKKRDFTKLELKPDHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHE 107

Query: 189  YNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPSEIIDFIHGSTANYGKVKLVLKKNRY 368
            YNLTPHSLYAAVSVGLET TI+SVL+KLSKTKLP EIIDFIHGSTANYGKVKLVLKKNRY
Sbjct: 108  YNLTPHSLYAAVSVGLETSTIISVLSKLSKTKLPREIIDFIHGSTANYGKVKLVLKKNRY 167

Query: 369  FVESPFPEVLKRLRKDNVISKAQINFEDSHGV--------------HEDLLNRAELATTI 506
            FVESPFPEVL  L  D+VISKA+I+ EDS G               HE+LLN  +LA   
Sbjct: 168  FVESPFPEVLSNLLNDDVISKARISPEDSLGASSFTISKTSGQASGHEELLNGMDLAAAT 227

Query: 507  E-KETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDYRNDTVNPDLNIALKPQKHERPYQ 683
            E KETHSFEIDPSQVENVKQRCLPNALNYPMLEEYD+RNDTVNPDL++ LKPQ   RPYQ
Sbjct: 228  EDKETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQARPRPYQ 287

Query: 684  QTSLSKMFRNGRARSGIIVLPCGAGKSLVGVSAACRVKKSCLCLATNAVSVDQWAFQFKL 863
            + SLSKMF NGRARSGIIVLPCGAGKSLVGVSAACR+KKSCLCLATNAVSVDQWAFQFKL
Sbjct: 288  EKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKL 347

Query: 864  WSTIEDDNISCFTSDNKEKFRGLAGVVVTTYNMIAFGGXXXXXXXXXXXXXXXXXWGLLL 1043
            WSTI+DD+IS FTSDNKEKFRG+AGVVVTTYNM+AFGG                 WGLLL
Sbjct: 348  WSTIKDDHISRFTSDNKEKFRGMAGVVVTTYNMVAFGGKRSEDSEKIIEEIRNREWGLLL 407

Query: 1044 MDEVHVVPAHMFRKVISI 1097
            MDEVHVVPAHMFRKVISI
Sbjct: 408  MDEVHVVPAHMFRKVISI 425


>gb|EEE55219.1| hypothetical protein OsJ_03086 [Oryza sativa Japonica Group]
          Length = 766

 Score =  598 bits (1543), Expect = e-169
 Identities = 302/381 (79%), Positives = 324/381 (85%), Gaps = 16/381 (4%)
 Frame = +3

Query: 3    EREIKKRDFTQLELKPDHVNRPLWACADGRIILETFSPLYKQAYDFLIAIAEPVCRPESM 182
            +RE+KKRDFT+LELKPDH NRPLWACADGRI LETFSPLYKQAYDFLIAIAEPVCRPESM
Sbjct: 44   DREVKKRDFTKLELKPDHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESM 103

Query: 183  HEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPSEIIDFIHGSTANYGKVKLVLKKN 362
            HEYNLTPHSLYAAVSVGLET TI+SV++KLSKTKLP EIIDFIH STANYGKVKLVLKKN
Sbjct: 104  HEYNLTPHSLYAAVSVGLETSTIISVMSKLSKTKLPREIIDFIHASTANYGKVKLVLKKN 163

Query: 363  RYFVESPFPEVLKRLRKDNVISKAQINFEDSHGV---------------HEDLLNRAELA 497
            RYFVESPFPEVLK L KD++I +A+I+ EDS G                HEDLL+  ELA
Sbjct: 164  RYFVESPFPEVLKTLLKDDIICRARISPEDSVGAPSFTISKTAGEMASGHEDLLDGMELA 223

Query: 498  TTIE-KETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDYRNDTVNPDLNIALKPQKHER 674
               E KETHSFEIDPSQVENVKQRCLPNALN+PMLEEYD+RNDTVNPDL + LKPQ   R
Sbjct: 224  AATEDKETHSFEIDPSQVENVKQRCLPNALNFPMLEEYDFRNDTVNPDLEMELKPQARPR 283

Query: 675  PYQQTSLSKMFRNGRARSGIIVLPCGAGKSLVGVSAACRVKKSCLCLATNAVSVDQWAFQ 854
            PYQ+ SLSKMF NGRARSGIIVLPCGAGKSLVGVSAACR+KKSCLCLATNAVSVDQWAFQ
Sbjct: 284  PYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQ 343

Query: 855  FKLWSTIEDDNISCFTSDNKEKFRGLAGVVVTTYNMIAFGGXXXXXXXXXXXXXXXXXWG 1034
            FKLWSTI+D++IS FTSDNKEKFRG+AGVVVTTYNM+AFGG                 WG
Sbjct: 344  FKLWSTIKDEHISRFTSDNKEKFRGMAGVVVTTYNMVAFGGKRSEDSEKIIEEIRNREWG 403

Query: 1035 LLLMDEVHVVPAHMFRKVISI 1097
            LLLMDEVHVVPAHMFRKVISI
Sbjct: 404  LLLMDEVHVVPAHMFRKVISI 424


>gb|EEC71313.1| hypothetical protein OsI_03346 [Oryza sativa Indica Group]
          Length = 766

 Score =  598 bits (1543), Expect = e-169
 Identities = 302/381 (79%), Positives = 324/381 (85%), Gaps = 16/381 (4%)
 Frame = +3

Query: 3    EREIKKRDFTQLELKPDHVNRPLWACADGRIILETFSPLYKQAYDFLIAIAEPVCRPESM 182
            +RE+KKRDFT+LELKPDH NRPLWACADGRI LETFSPLYKQAYDFLIAIAEPVCRPESM
Sbjct: 44   DREVKKRDFTKLELKPDHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESM 103

Query: 183  HEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPSEIIDFIHGSTANYGKVKLVLKKN 362
            HEYNLTPHSLYAAVSVGLET TI+SV++KLSKTKLP EIIDFIH STANYGKVKLVLKKN
Sbjct: 104  HEYNLTPHSLYAAVSVGLETSTIISVMSKLSKTKLPREIIDFIHASTANYGKVKLVLKKN 163

Query: 363  RYFVESPFPEVLKRLRKDNVISKAQINFEDSHGV---------------HEDLLNRAELA 497
            RYFVESPFPEVLK L KD++I +A+I+ EDS G                HEDLL+  ELA
Sbjct: 164  RYFVESPFPEVLKTLLKDDIICRARISPEDSVGAPSFTISKTAGEMASGHEDLLDGMELA 223

Query: 498  TTIE-KETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDYRNDTVNPDLNIALKPQKHER 674
               E KETHSFEIDPSQVENVKQRCLPNALN+PMLEEYD+RNDTVNPDL + LKPQ   R
Sbjct: 224  AATEDKETHSFEIDPSQVENVKQRCLPNALNFPMLEEYDFRNDTVNPDLEMELKPQARPR 283

Query: 675  PYQQTSLSKMFRNGRARSGIIVLPCGAGKSLVGVSAACRVKKSCLCLATNAVSVDQWAFQ 854
            PYQ+ SLSKMF NGRARSGIIVLPCGAGKSLVGVSAACR+KKSCLCLATNAVSVDQWAFQ
Sbjct: 284  PYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQ 343

Query: 855  FKLWSTIEDDNISCFTSDNKEKFRGLAGVVVTTYNMIAFGGXXXXXXXXXXXXXXXXXWG 1034
            FKLWSTI+D++IS FTSDNKEKFRG+AGVVVTTYNM+AFGG                 WG
Sbjct: 344  FKLWSTIKDEHISRFTSDNKEKFRGMAGVVVTTYNMVAFGGKRSEDSEKIIEEIRNREWG 403

Query: 1035 LLLMDEVHVVPAHMFRKVISI 1097
            LLLMDEVHVVPAHMFRKVISI
Sbjct: 404  LLLMDEVHVVPAHMFRKVISI 424


>ref|NP_001043936.1| Os01g0691600 [Oryza sativa Japonica Group]
            gi|113533467|dbj|BAF05850.1| Os01g0691600 [Oryza sativa
            Japonica Group]
          Length = 580

 Score =  598 bits (1543), Expect = e-169
 Identities = 302/381 (79%), Positives = 324/381 (85%), Gaps = 16/381 (4%)
 Frame = +3

Query: 3    EREIKKRDFTQLELKPDHVNRPLWACADGRIILETFSPLYKQAYDFLIAIAEPVCRPESM 182
            +RE+KKRDFT+LELKPDH NRPLWACADGRI LETFSPLYKQAYDFLIAIAEPVCRPESM
Sbjct: 44   DREVKKRDFTKLELKPDHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESM 103

Query: 183  HEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPSEIIDFIHGSTANYGKVKLVLKKN 362
            HEYNLTPHSLYAAVSVGLET TI+SV++KLSKTKLP EIIDFIH STANYGKVKLVLKKN
Sbjct: 104  HEYNLTPHSLYAAVSVGLETSTIISVMSKLSKTKLPREIIDFIHASTANYGKVKLVLKKN 163

Query: 363  RYFVESPFPEVLKRLRKDNVISKAQINFEDSHGV---------------HEDLLNRAELA 497
            RYFVESPFPEVLK L KD++I +A+I+ EDS G                HEDLL+  ELA
Sbjct: 164  RYFVESPFPEVLKTLLKDDIICRARISPEDSVGAPSFTISKTAGEMASGHEDLLDGMELA 223

Query: 498  TTIE-KETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDYRNDTVNPDLNIALKPQKHER 674
               E KETHSFEIDPSQVENVKQRCLPNALN+PMLEEYD+RNDTVNPDL + LKPQ   R
Sbjct: 224  AATEDKETHSFEIDPSQVENVKQRCLPNALNFPMLEEYDFRNDTVNPDLEMELKPQARPR 283

Query: 675  PYQQTSLSKMFRNGRARSGIIVLPCGAGKSLVGVSAACRVKKSCLCLATNAVSVDQWAFQ 854
            PYQ+ SLSKMF NGRARSGIIVLPCGAGKSLVGVSAACR+KKSCLCLATNAVSVDQWAFQ
Sbjct: 284  PYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQ 343

Query: 855  FKLWSTIEDDNISCFTSDNKEKFRGLAGVVVTTYNMIAFGGXXXXXXXXXXXXXXXXXWG 1034
            FKLWSTI+D++IS FTSDNKEKFRG+AGVVVTTYNM+AFGG                 WG
Sbjct: 344  FKLWSTIKDEHISRFTSDNKEKFRGMAGVVVTTYNMVAFGGKRSEDSEKIIEEIRNREWG 403

Query: 1035 LLLMDEVHVVPAHMFRKVISI 1097
            LLLMDEVHVVPAHMFRKVISI
Sbjct: 404  LLLMDEVHVVPAHMFRKVISI 424


>ref|XP_006663357.1| PREDICTED: DNA repair helicase XPB1-like [Oryza brachyantha]
          Length = 918

 Score =  598 bits (1542), Expect = e-168
 Identities = 302/381 (79%), Positives = 324/381 (85%), Gaps = 16/381 (4%)
 Frame = +3

Query: 3    EREIKKRDFTQLELKPDHVNRPLWACADGRIILETFSPLYKQAYDFLIAIAEPVCRPESM 182
            +RE+KKRDFT+LELKPDH NRPLWACADGRI LETFSPLYKQAYDFLIAIAEPVCRPESM
Sbjct: 197  DREVKKRDFTKLELKPDHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESM 256

Query: 183  HEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPSEIIDFIHGSTANYGKVKLVLKKN 362
            HEYNLTPHSLYAAVSVGLET TI+SV++KLSKTKLP EIIDFIH STANYGKVKLVLKKN
Sbjct: 257  HEYNLTPHSLYAAVSVGLETSTIISVMSKLSKTKLPREIIDFIHASTANYGKVKLVLKKN 316

Query: 363  RYFVESPFPEVLKRLRKDNVISKAQINFEDSHGV---------------HEDLLNRAELA 497
            RYFVESPFPEVLK L +D++IS+A I+ EDS G                HEDLL+  ELA
Sbjct: 317  RYFVESPFPEVLKTLLRDDIISRAWISPEDSVGAPSFTVSKTAGEMASGHEDLLDGMELA 376

Query: 498  TTIE-KETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDYRNDTVNPDLNIALKPQKHER 674
               E KETHSFEIDPSQVENVKQRCLPNALN+PMLEEYD+RNDTVNPDL + LKPQ   R
Sbjct: 377  AATEDKETHSFEIDPSQVENVKQRCLPNALNFPMLEEYDFRNDTVNPDLEMELKPQARPR 436

Query: 675  PYQQTSLSKMFRNGRARSGIIVLPCGAGKSLVGVSAACRVKKSCLCLATNAVSVDQWAFQ 854
            PYQ+ SLSKMF NGRARSGIIVLPCGAGKSLVGVSAACR+KKSCLCLATNAVSVDQWAFQ
Sbjct: 437  PYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQ 496

Query: 855  FKLWSTIEDDNISCFTSDNKEKFRGLAGVVVTTYNMIAFGGXXXXXXXXXXXXXXXXXWG 1034
            FKLWSTI+D++IS FTSDNKEKFRG+AGVVVTTYNM+AFGG                 WG
Sbjct: 497  FKLWSTIKDEHISRFTSDNKEKFRGMAGVVVTTYNMVAFGGKRSEDSEKIIEEIRNREWG 556

Query: 1035 LLLMDEVHVVPAHMFRKVISI 1097
            LLLMDEVHVVPAHMFRKVISI
Sbjct: 557  LLLMDEVHVVPAHMFRKVISI 577


>tpg|DAA58033.1| TPA: hypothetical protein ZEAMMB73_851798 [Zea mays]
          Length = 767

 Score =  595 bits (1535), Expect = e-168
 Identities = 302/381 (79%), Positives = 322/381 (84%), Gaps = 16/381 (4%)
 Frame = +3

Query: 3    EREIKKRDFTQLELKPDHVNRPLWACADGRIILETFSPLYKQAYDFLIAIAEPVCRPESM 182
            + E+KKRDFT+LELK DH +RPLWACADGRI LETFSPLYKQAYDFLIAIAEPVCRPESM
Sbjct: 46   DTEVKKRDFTKLELKVDHASRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESM 105

Query: 183  HEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPSEIIDFIHGSTANYGKVKLVLKKN 362
            HEYNLTPHSLYAAVSVGLET TI+SVL+KLSKTKLP EIIDFIHGSTANYGKVKLVLKKN
Sbjct: 106  HEYNLTPHSLYAAVSVGLETSTIISVLSKLSKTKLPREIIDFIHGSTANYGKVKLVLKKN 165

Query: 363  RYFVESPFPEVLKRLRKDNVISKAQINFEDSHGV---------------HEDLLNRAELA 497
            RYFVESPFPEVL  L +D VIS+A+I+ EDS G                HEDLLN  E+A
Sbjct: 166  RYFVESPFPEVLSTLLRDEVISRARISPEDSLGAPSFTVSKTSGQIASGHEDLLNGMEIA 225

Query: 498  TTIE-KETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDYRNDTVNPDLNIALKPQKHER 674
               E KETHSFEIDPSQVENVKQRCLPNALNYPMLEEYD+RNDTVNPDL++ LKPQ   R
Sbjct: 226  AATEDKETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQARPR 285

Query: 675  PYQQTSLSKMFRNGRARSGIIVLPCGAGKSLVGVSAACRVKKSCLCLATNAVSVDQWAFQ 854
            PYQ+ SLSKMF NGRARSGIIVLPCGAGKSLVGVSAACR+KKSCLCLATNAVSVDQWAFQ
Sbjct: 286  PYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQ 345

Query: 855  FKLWSTIEDDNISCFTSDNKEKFRGLAGVVVTTYNMIAFGGXXXXXXXXXXXXXXXXXWG 1034
            FKLWSTI+D+NIS FTSDNKEKF G+AGVVVTTYNM+AFGG                 WG
Sbjct: 346  FKLWSTIKDENISRFTSDNKEKFTGMAGVVVTTYNMVAFGGKRSEDSEKIIEEIRNREWG 405

Query: 1035 LLLMDEVHVVPAHMFRKVISI 1097
            LLLMDEVHVVPAHMFRKVISI
Sbjct: 406  LLLMDEVHVVPAHMFRKVISI 426


>tpg|DAA58032.1| TPA: hypothetical protein ZEAMMB73_851798 [Zea mays]
          Length = 702

 Score =  595 bits (1535), Expect = e-168
 Identities = 302/381 (79%), Positives = 322/381 (84%), Gaps = 16/381 (4%)
 Frame = +3

Query: 3    EREIKKRDFTQLELKPDHVNRPLWACADGRIILETFSPLYKQAYDFLIAIAEPVCRPESM 182
            + E+KKRDFT+LELK DH +RPLWACADGRI LETFSPLYKQAYDFLIAIAEPVCRPESM
Sbjct: 46   DTEVKKRDFTKLELKVDHASRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESM 105

Query: 183  HEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPSEIIDFIHGSTANYGKVKLVLKKN 362
            HEYNLTPHSLYAAVSVGLET TI+SVL+KLSKTKLP EIIDFIHGSTANYGKVKLVLKKN
Sbjct: 106  HEYNLTPHSLYAAVSVGLETSTIISVLSKLSKTKLPREIIDFIHGSTANYGKVKLVLKKN 165

Query: 363  RYFVESPFPEVLKRLRKDNVISKAQINFEDSHGV---------------HEDLLNRAELA 497
            RYFVESPFPEVL  L +D VIS+A+I+ EDS G                HEDLLN  E+A
Sbjct: 166  RYFVESPFPEVLSTLLRDEVISRARISPEDSLGAPSFTVSKTSGQIASGHEDLLNGMEIA 225

Query: 498  TTIE-KETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDYRNDTVNPDLNIALKPQKHER 674
               E KETHSFEIDPSQVENVKQRCLPNALNYPMLEEYD+RNDTVNPDL++ LKPQ   R
Sbjct: 226  AATEDKETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQARPR 285

Query: 675  PYQQTSLSKMFRNGRARSGIIVLPCGAGKSLVGVSAACRVKKSCLCLATNAVSVDQWAFQ 854
            PYQ+ SLSKMF NGRARSGIIVLPCGAGKSLVGVSAACR+KKSCLCLATNAVSVDQWAFQ
Sbjct: 286  PYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQ 345

Query: 855  FKLWSTIEDDNISCFTSDNKEKFRGLAGVVVTTYNMIAFGGXXXXXXXXXXXXXXXXXWG 1034
            FKLWSTI+D+NIS FTSDNKEKF G+AGVVVTTYNM+AFGG                 WG
Sbjct: 346  FKLWSTIKDENISRFTSDNKEKFTGMAGVVVTTYNMVAFGGKRSEDSEKIIEEIRNREWG 405

Query: 1035 LLLMDEVHVVPAHMFRKVISI 1097
            LLLMDEVHVVPAHMFRKVISI
Sbjct: 406  LLLMDEVHVVPAHMFRKVISI 426


>ref|XP_003569596.1| PREDICTED: DNA repair helicase XPB2-like [Brachypodium distachyon]
          Length = 766

 Score =  595 bits (1534), Expect = e-167
 Identities = 303/379 (79%), Positives = 322/379 (84%), Gaps = 16/379 (4%)
 Frame = +3

Query: 9    EIKKRDFTQLELKPDHVNRPLWACADGRIILETFSPLYKQAYDFLIAIAEPVCRPESMHE 188
            E+KKRDFT+LELKPDHVNRPLWACADGRI LETFSPLYKQAYDFLIAIAEPVCRPESMHE
Sbjct: 48   EVKKRDFTKLELKPDHVNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHE 107

Query: 189  YNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPSEIIDFIHGSTANYGKVKLVLKKNRY 368
            YNLTPHSLYAAVSVGLET TI+SVL+KLSKTKLP EIIDFIHGSTANYGKVKLVLKKNRY
Sbjct: 108  YNLTPHSLYAAVSVGLETTTIISVLSKLSKTKLPREIIDFIHGSTANYGKVKLVLKKNRY 167

Query: 369  FVESPFPEVLKRLRKDNVISKAQINFEDSHGV---------------HEDLLNRAELATT 503
            FVESPFPEVLK L  D VI++A+ + EDS G                HEDLL+  ELA  
Sbjct: 168  FVESPFPEVLKTLLNDEVIARARQSPEDSLGGPSFTVSKTAGEIASGHEDLLDGMELAAA 227

Query: 504  IE-KETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDYRNDTVNPDLNIALKPQKHERPY 680
             E KETHSFEIDPSQVENVKQRCLPNALN+PMLEEYD+RNDTVNPDL++ LKPQ   RPY
Sbjct: 228  TEDKETHSFEIDPSQVENVKQRCLPNALNFPMLEEYDFRNDTVNPDLDMELKPQARPRPY 287

Query: 681  QQTSLSKMFRNGRARSGIIVLPCGAGKSLVGVSAACRVKKSCLCLATNAVSVDQWAFQFK 860
            Q+ SLSKMF NGRARSGIIVLPCGAGKSLVGVSAACR+KKSCLCLATNAVSVDQWAFQFK
Sbjct: 288  QEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFK 347

Query: 861  LWSTIEDDNISCFTSDNKEKFRGLAGVVVTTYNMIAFGGXXXXXXXXXXXXXXXXXWGLL 1040
            LWSTI D++IS FTSDNKEKFRG+AGVVVTTYNM+AFGG                 WGLL
Sbjct: 348  LWSTIRDEHISRFTSDNKEKFRGMAGVVVTTYNMVAFGGKRSEDSEKIIEEIRNREWGLL 407

Query: 1041 LMDEVHVVPAHMFRKVISI 1097
            LMDEVHVVPAHMFRKVISI
Sbjct: 408  LMDEVHVVPAHMFRKVISI 426


>ref|XP_002456182.1| hypothetical protein SORBIDRAFT_03g031750 [Sorghum bicolor]
            gi|241928157|gb|EES01302.1| hypothetical protein
            SORBIDRAFT_03g031750 [Sorghum bicolor]
          Length = 767

 Score =  589 bits (1518), Expect = e-166
 Identities = 299/381 (78%), Positives = 319/381 (83%), Gaps = 16/381 (4%)
 Frame = +3

Query: 3    EREIKKRDFTQLELKPDHVNRPLWACADGRIILETFSPLYKQAYDFLIAIAEPVCRPESM 182
            + E+KKRDFT+LELK DH +RPLWACADGRI LETFSPLYKQAYDFLIAIAEPVCRPESM
Sbjct: 46   DMEVKKRDFTKLELKVDHASRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESM 105

Query: 183  HEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPSEIIDFIHGSTANYGKVKLVLKKN 362
            HEYNLTPHSLYAAVSVGLET TI+SVL+KLSKTKLP EIIDFIH STANYGKVKLVLKKN
Sbjct: 106  HEYNLTPHSLYAAVSVGLETSTIISVLSKLSKTKLPREIIDFIHASTANYGKVKLVLKKN 165

Query: 363  RYFVESPFPEVLKRLRKDNVISKAQINFEDSHGV---------------HEDLLNRAELA 497
            RYFVESPFPEVL  L +D VIS+A+I+ EDS G                HEDLLN  E+A
Sbjct: 166  RYFVESPFPEVLSNLLRDEVISRARISPEDSLGAPSFTVSKTSGQIASGHEDLLNGMEIA 225

Query: 498  TTIE-KETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDYRNDTVNPDLNIALKPQKHER 674
               E KETHSFEIDPSQVENVKQRCLPNALNYPMLEEYD+RNDTVNPDL + LKPQ   R
Sbjct: 226  AATEDKETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLEMELKPQARPR 285

Query: 675  PYQQTSLSKMFRNGRARSGIIVLPCGAGKSLVGVSAACRVKKSCLCLATNAVSVDQWAFQ 854
            PYQ+ SLSKMF NGRARSGIIVLPCGAGKSLVGVSAACR+KKSCLCLATNAVSVDQWAFQ
Sbjct: 286  PYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQ 345

Query: 855  FKLWSTIEDDNISCFTSDNKEKFRGLAGVVVTTYNMIAFGGXXXXXXXXXXXXXXXXXWG 1034
            FKLWSTI+D++IS FTSDNKEKF G+A VVVTTYNM+AFGG                 WG
Sbjct: 346  FKLWSTIKDEHISRFTSDNKEKFTGMASVVVTTYNMVAFGGKRSEDSEKIIEEIRNREWG 405

Query: 1035 LLLMDEVHVVPAHMFRKVISI 1097
            LLLMDEVHVVPAHMFRKVISI
Sbjct: 406  LLLMDEVHVVPAHMFRKVISI 426


>gb|EOY24804.1| Xeroderma pigmentosum complementation group B 2 isoform 3, partial
            [Theobroma cacao]
          Length = 742

 Score =  586 bits (1511), Expect = e-165
 Identities = 296/381 (77%), Positives = 320/381 (83%), Gaps = 16/381 (4%)
 Frame = +3

Query: 3    EREIKKRDFTQLELKPDHVNRPLWACADGRIILETFSPLYKQAYDFLIAIAEPVCRPESM 182
            E E KKRDF++LELKPDH NRPLWACADGRI LETFSPLYKQAYDFLIAIAEPVCRPESM
Sbjct: 66   ENEGKKRDFSKLELKPDHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESM 125

Query: 183  HEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPSEIIDFIHGSTANYGKVKLVLKKN 362
            HEYNLTPHSLYAAVSVGLETETI+SVLNKLSKTKLP E+IDFIH STANYGKVKLVLKKN
Sbjct: 126  HEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIDFIHASTANYGKVKLVLKKN 185

Query: 363  RYFVESPFPEVLKRLRKDNVISKAQINFEDSHGV---------------HEDLLNRAELA 497
            RYF+ESPFPEVLK+L +D+VI++A+I  E +HG                H+ LLN AELA
Sbjct: 186  RYFIESPFPEVLKKLLQDDVIARARIASESAHGSDGFTISKAAGEIGTGHDGLLNEAELA 245

Query: 498  T-TIEKETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDYRNDTVNPDLNIALKPQKHER 674
              T EKETH+FEIDP+QVENVKQRCLPNALNYPMLEEYD+RNDTVNPDL++ LKP    R
Sbjct: 246  AATEEKETHAFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPHAQPR 305

Query: 675  PYQQTSLSKMFRNGRARSGIIVLPCGAGKSLVGVSAACRVKKSCLCLATNAVSVDQWAFQ 854
            PYQ+ SLSKMF NGRARSGIIVLPCGAGKSLVGVSAA R+KKSCLCLATNAVSVDQWAFQ
Sbjct: 306  PYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASRIKKSCLCLATNAVSVDQWAFQ 365

Query: 855  FKLWSTIEDDNISCFTSDNKEKFRGLAGVVVTTYNMIAFGGXXXXXXXXXXXXXXXXXWG 1034
            FKLWSTI DD I  FTSD+KE+FRG AGVVVTTYNM+AFGG                 WG
Sbjct: 366  FKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWG 425

Query: 1035 LLLMDEVHVVPAHMFRKVISI 1097
            LLLMDEVHVVPAHMFRKVIS+
Sbjct: 426  LLLMDEVHVVPAHMFRKVISL 446


>gb|EOY24803.1| Xeroderma pigmentosum complementation group B 2 isoform 2, partial
            [Theobroma cacao]
          Length = 809

 Score =  586 bits (1511), Expect = e-165
 Identities = 296/381 (77%), Positives = 320/381 (83%), Gaps = 16/381 (4%)
 Frame = +3

Query: 3    EREIKKRDFTQLELKPDHVNRPLWACADGRIILETFSPLYKQAYDFLIAIAEPVCRPESM 182
            E E KKRDF++LELKPDH NRPLWACADGRI LETFSPLYKQAYDFLIAIAEPVCRPESM
Sbjct: 66   ENEGKKRDFSKLELKPDHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESM 125

Query: 183  HEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPSEIIDFIHGSTANYGKVKLVLKKN 362
            HEYNLTPHSLYAAVSVGLETETI+SVLNKLSKTKLP E+IDFIH STANYGKVKLVLKKN
Sbjct: 126  HEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIDFIHASTANYGKVKLVLKKN 185

Query: 363  RYFVESPFPEVLKRLRKDNVISKAQINFEDSHGV---------------HEDLLNRAELA 497
            RYF+ESPFPEVLK+L +D+VI++A+I  E +HG                H+ LLN AELA
Sbjct: 186  RYFIESPFPEVLKKLLQDDVIARARIASESAHGSDGFTISKAAGEIGTGHDGLLNEAELA 245

Query: 498  T-TIEKETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDYRNDTVNPDLNIALKPQKHER 674
              T EKETH+FEIDP+QVENVKQRCLPNALNYPMLEEYD+RNDTVNPDL++ LKP    R
Sbjct: 246  AATEEKETHAFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPHAQPR 305

Query: 675  PYQQTSLSKMFRNGRARSGIIVLPCGAGKSLVGVSAACRVKKSCLCLATNAVSVDQWAFQ 854
            PYQ+ SLSKMF NGRARSGIIVLPCGAGKSLVGVSAA R+KKSCLCLATNAVSVDQWAFQ
Sbjct: 306  PYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASRIKKSCLCLATNAVSVDQWAFQ 365

Query: 855  FKLWSTIEDDNISCFTSDNKEKFRGLAGVVVTTYNMIAFGGXXXXXXXXXXXXXXXXXWG 1034
            FKLWSTI DD I  FTSD+KE+FRG AGVVVTTYNM+AFGG                 WG
Sbjct: 366  FKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWG 425

Query: 1035 LLLMDEVHVVPAHMFRKVISI 1097
            LLLMDEVHVVPAHMFRKVIS+
Sbjct: 426  LLLMDEVHVVPAHMFRKVISL 446


>gb|EOY24802.1| Xeroderma pigmentosum complementation group B 1 isoform 1 [Theobroma
            cacao]
          Length = 771

 Score =  586 bits (1511), Expect = e-165
 Identities = 296/381 (77%), Positives = 320/381 (83%), Gaps = 16/381 (4%)
 Frame = +3

Query: 3    EREIKKRDFTQLELKPDHVNRPLWACADGRIILETFSPLYKQAYDFLIAIAEPVCRPESM 182
            E E KKRDF++LELKPDH NRPLWACADGRI LETFSPLYKQAYDFLIAIAEPVCRPESM
Sbjct: 45   ENEGKKRDFSKLELKPDHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESM 104

Query: 183  HEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPSEIIDFIHGSTANYGKVKLVLKKN 362
            HEYNLTPHSLYAAVSVGLETETI+SVLNKLSKTKLP E+IDFIH STANYGKVKLVLKKN
Sbjct: 105  HEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIDFIHASTANYGKVKLVLKKN 164

Query: 363  RYFVESPFPEVLKRLRKDNVISKAQINFEDSHGV---------------HEDLLNRAELA 497
            RYF+ESPFPEVLK+L +D+VI++A+I  E +HG                H+ LLN AELA
Sbjct: 165  RYFIESPFPEVLKKLLQDDVIARARIASESAHGSDGFTISKAAGEIGTGHDGLLNEAELA 224

Query: 498  T-TIEKETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDYRNDTVNPDLNIALKPQKHER 674
              T EKETH+FEIDP+QVENVKQRCLPNALNYPMLEEYD+RNDTVNPDL++ LKP    R
Sbjct: 225  AATEEKETHAFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPHAQPR 284

Query: 675  PYQQTSLSKMFRNGRARSGIIVLPCGAGKSLVGVSAACRVKKSCLCLATNAVSVDQWAFQ 854
            PYQ+ SLSKMF NGRARSGIIVLPCGAGKSLVGVSAA R+KKSCLCLATNAVSVDQWAFQ
Sbjct: 285  PYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASRIKKSCLCLATNAVSVDQWAFQ 344

Query: 855  FKLWSTIEDDNISCFTSDNKEKFRGLAGVVVTTYNMIAFGGXXXXXXXXXXXXXXXXXWG 1034
            FKLWSTI DD I  FTSD+KE+FRG AGVVVTTYNM+AFGG                 WG
Sbjct: 345  FKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWG 404

Query: 1035 LLLMDEVHVVPAHMFRKVISI 1097
            LLLMDEVHVVPAHMFRKVIS+
Sbjct: 405  LLLMDEVHVVPAHMFRKVISL 425


>ref|XP_006368763.1| hypothetical protein POPTR_0001s09670g [Populus trichocarpa]
            gi|550346907|gb|ERP65332.1| hypothetical protein
            POPTR_0001s09670g [Populus trichocarpa]
          Length = 786

 Score =  584 bits (1506), Expect = e-164
 Identities = 296/379 (78%), Positives = 314/379 (82%), Gaps = 16/379 (4%)
 Frame = +3

Query: 9    EIKKRDFTQLELKPDHVNRPLWACADGRIILETFSPLYKQAYDFLIAIAEPVCRPESMHE 188
            E KKRDF++LELKPDH NRPLWACADGRI LETFS LYKQAYDFLIAIAEPVCRPESMHE
Sbjct: 44   EGKKRDFSKLELKPDHANRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHE 103

Query: 189  YNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPSEIIDFIHGSTANYGKVKLVLKKNRY 368
            YNLTPHSLYAAVSVGLETETI+SVLNKLSKTKLP E+IDFIHGSTANYGKVKLVLKKNRY
Sbjct: 104  YNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIDFIHGSTANYGKVKLVLKKNRY 163

Query: 369  FVESPFPEVLKRLRKDNVISKAQINFEDSHGV---------------HEDLLNRAELATT 503
            F+ESPF EVLK+L KD VI+KA+I  E SHG                H+ LLN AELA  
Sbjct: 164  FIESPFTEVLKKLLKDEVIAKARIQPESSHGTEGFTISKAAGEIGTSHDGLLNEAELAAA 223

Query: 504  IE-KETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDYRNDTVNPDLNIALKPQKHERPY 680
             E KETHSFE+DPSQVENVKQRCLPNALNYPMLEEYD+RNDTVNPDLN+ LKP    RPY
Sbjct: 224  AEEKETHSFEVDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLNMELKPHAQPRPY 283

Query: 681  QQTSLSKMFRNGRARSGIIVLPCGAGKSLVGVSAACRVKKSCLCLATNAVSVDQWAFQFK 860
            Q+ SLSKMF NGRARSGIIVLPCGAGKSLVGVSAACR+KKSCLCLATNAVSVDQWAFQF 
Sbjct: 284  QEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFS 343

Query: 861  LWSTIEDDNISCFTSDNKEKFRGLAGVVVTTYNMIAFGGXXXXXXXXXXXXXXXXXWGLL 1040
            LWS I  D I  FTSD+KE+F+G AGVVVTTYNM+AFGG                 WGLL
Sbjct: 344  LWSDISQDQICRFTSDSKERFKGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLL 403

Query: 1041 LMDEVHVVPAHMFRKVISI 1097
            LMDEVHVVPAHMFRKVISI
Sbjct: 404  LMDEVHVVPAHMFRKVISI 422


>ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vitis vinifera]
          Length = 771

 Score =  583 bits (1503), Expect = e-164
 Identities = 294/381 (77%), Positives = 320/381 (83%), Gaps = 16/381 (4%)
 Frame = +3

Query: 3    EREIKKRDFTQLELKPDHVNRPLWACADGRIILETFSPLYKQAYDFLIAIAEPVCRPESM 182
            E+E KKRDFT+LELK DH NRPLWACADGRI LETFSPLYKQAYDFLIAIAEPVCRPESM
Sbjct: 45   EKEGKKRDFTKLELKVDHSNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESM 104

Query: 183  HEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPSEIIDFIHGSTANYGKVKLVLKKN 362
            HEYNLTPHSLYAAVSVGLETETI++VL+KLSKTKLP E+IDFIH STANYGKVKLVLKKN
Sbjct: 105  HEYNLTPHSLYAAVSVGLETETIIAVLSKLSKTKLPKEMIDFIHASTANYGKVKLVLKKN 164

Query: 363  RYFVESPFPEVLKRLRKDNVISKAQINFEDS---------------HGVHEDLLNRAELA 497
            RYFVESPFPEVLK L +D VIS+++I+ E S                G H++L+N AELA
Sbjct: 165  RYFVESPFPEVLKTLLRDEVISRSRISHEGSTGNDGFTISKTVGEIEGRHDELINEAELA 224

Query: 498  TTIE-KETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDYRNDTVNPDLNIALKPQKHER 674
               E KETHSFE+DP+QVENVKQRCLPNALNYPMLEEYD+RNDTVNPDL++ LKPQ   R
Sbjct: 225  AAAEEKETHSFEVDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPR 284

Query: 675  PYQQTSLSKMFRNGRARSGIIVLPCGAGKSLVGVSAACRVKKSCLCLATNAVSVDQWAFQ 854
            PYQ+ SLSKMF NGRARSGIIVLPCGAGKSLVGVSAACR++KSCLCLATNAVSVDQWAFQ
Sbjct: 285  PYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQ 344

Query: 855  FKLWSTIEDDNISCFTSDNKEKFRGLAGVVVTTYNMIAFGGXXXXXXXXXXXXXXXXXWG 1034
            FKLWSTI D+ I  FTSD+KE+FRG AGVVVTTYNM+AFGG                 WG
Sbjct: 345  FKLWSTIRDEQICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWG 404

Query: 1035 LLLMDEVHVVPAHMFRKVISI 1097
            LLLMDEVHVVPAHMFRKVISI
Sbjct: 405  LLLMDEVHVVPAHMFRKVISI 425


>dbj|BAJ96793.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 762

 Score =  580 bits (1494), Expect = e-163
 Identities = 296/380 (77%), Positives = 319/380 (83%), Gaps = 15/380 (3%)
 Frame = +3

Query: 3    EREIKKRDFTQLELKPDHVNRPLWACADGRIILETFSPLYKQAYDFLIAIAEPVCRPESM 182
            + E+KKRDFT+LELKPDHVNRPLWACADGRI LETFSPLYKQAYDFLIAIAEPVCRPESM
Sbjct: 46   DNEVKKRDFTKLELKPDHVNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESM 105

Query: 183  HEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPSEIIDFIHGSTANYGKVKLVLKKN 362
            HEYNLTPHSLYAAVSVGLET TI+SVL+KLSKTKLP EII+FIHGSTANYGKVKLVLKKN
Sbjct: 106  HEYNLTPHSLYAAVSVGLETNTIISVLSKLSKTKLPHEIIEFIHGSTANYGKVKLVLKKN 165

Query: 363  RYFVESPFPEVLKRLRKDNVISKAQINFEDSHGVH--------------EDLLNRAELAT 500
            +YFVESPFPEVL++L  D+VISKA+   ED  G                 DLL+  ELA 
Sbjct: 166  QYFVESPFPEVLEKLLNDDVISKARKAPEDCLGGSAFAVSKAAREIASGHDLLDGTELAD 225

Query: 501  TIE-KETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDYRNDTVNPDLNIALKPQKHERP 677
              E KETHSFE+  SQVENVKQRCLPNALN+PMLEEYD+RNDTVNPDL++ LKPQ   RP
Sbjct: 226  ANEDKETHSFEVYSSQVENVKQRCLPNALNFPMLEEYDFRNDTVNPDLDMELKPQARPRP 285

Query: 678  YQQTSLSKMFRNGRARSGIIVLPCGAGKSLVGVSAACRVKKSCLCLATNAVSVDQWAFQF 857
            YQ+ SLSKMF NGRARSGIIVLPCGAGKSLVGVSAACR+KKSCLCLATNAVSVDQWAFQF
Sbjct: 286  YQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQF 345

Query: 858  KLWSTIEDDNISCFTSDNKEKFRGLAGVVVTTYNMIAFGGXXXXXXXXXXXXXXXXXWGL 1037
            KLWSTI D++IS FTSDNKEKFRG+AGVVVTTYNM+AFGG                 WGL
Sbjct: 346  KLWSTIRDEHISRFTSDNKEKFRGMAGVVVTTYNMVAFGGKRSEDSEKIIEEIRNREWGL 405

Query: 1038 LLMDEVHVVPAHMFRKVISI 1097
            LLMDEVHVVPAHMFRKVISI
Sbjct: 406  LLMDEVHVVPAHMFRKVISI 425


>ref|XP_006343950.1| PREDICTED: DNA repair helicase XPB1-like [Solanum tuberosum]
          Length = 768

 Score =  578 bits (1489), Expect = e-162
 Identities = 290/381 (76%), Positives = 316/381 (82%), Gaps = 16/381 (4%)
 Frame = +3

Query: 3    EREIKKRDFTQLELKPDHVNRPLWACADGRIILETFSPLYKQAYDFLIAIAEPVCRPESM 182
            ERE KK DFT+LELKPDH NRPLWACADGRI LETFSPLYKQAYDFLIAIAEPVCRPESM
Sbjct: 47   EREGKKMDFTKLELKPDHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESM 106

Query: 183  HEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPSEIIDFIHGSTANYGKVKLVLKKN 362
            HEYNLTPHSLYAAVSVGLETETI++VL+KLSKTKLP E+IDFIH STANYGKVKLVLKKN
Sbjct: 107  HEYNLTPHSLYAAVSVGLETETIIAVLSKLSKTKLPKEMIDFIHASTANYGKVKLVLKKN 166

Query: 363  RYFVESPFPEVLKRLRKDNVISKAQINFEDSHGV---------------HEDLLNRAELA 497
            RYF+ESPFPEVLKRL  D+ I KA+I+ E  HG                H++L+N  ++A
Sbjct: 167  RYFIESPFPEVLKRLLADDAIGKARISSEGMHGKDGFTVSKPVNEIEGGHDELINEVDVA 226

Query: 498  TTIE-KETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDYRNDTVNPDLNIALKPQKHER 674
               E KETHSFEIDP+QVENVKQRCLPNALNYPM+EEYD+RNDTVNPDL++ LKPQ   R
Sbjct: 227  AAAEEKETHSFEIDPAQVENVKQRCLPNALNYPMMEEYDFRNDTVNPDLDMELKPQAQPR 286

Query: 675  PYQQTSLSKMFRNGRARSGIIVLPCGAGKSLVGVSAACRVKKSCLCLATNAVSVDQWAFQ 854
            PYQ+ SLSKMF NGRARSGIIVLPCGAGKSLVGVSAA R+KKSCLCLATNAVSVDQWAFQ
Sbjct: 287  PYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASRIKKSCLCLATNAVSVDQWAFQ 346

Query: 855  FKLWSTIEDDNISCFTSDNKEKFRGLAGVVVTTYNMIAFGGXXXXXXXXXXXXXXXXXWG 1034
            FKLWSTI ++ I  FTSD+KE+FRG  GVVVTTYNM+AFGG                 WG
Sbjct: 347  FKLWSTIREEQICRFTSDSKERFRGNVGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWG 406

Query: 1035 LLLMDEVHVVPAHMFRKVISI 1097
            LLLMDEVHVVPAHMFRKVISI
Sbjct: 407  LLLMDEVHVVPAHMFRKVISI 427


>ref|XP_004245582.1| PREDICTED: DNA repair helicase XPB1-like [Solanum lycopersicum]
          Length = 768

 Score =  577 bits (1486), Expect = e-162
 Identities = 290/381 (76%), Positives = 316/381 (82%), Gaps = 16/381 (4%)
 Frame = +3

Query: 3    EREIKKRDFTQLELKPDHVNRPLWACADGRIILETFSPLYKQAYDFLIAIAEPVCRPESM 182
            ERE KK DFT+LELKPDH NRPLWACADGRI LETFSPLYKQAYDFLIAIAEPVCRPESM
Sbjct: 47   EREGKKMDFTKLELKPDHGNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESM 106

Query: 183  HEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPSEIIDFIHGSTANYGKVKLVLKKN 362
            HEYNLTPHSLYAAVSVGLETETI++VL+KLSKTKLP E+IDFIH STANYGKVKLVLKKN
Sbjct: 107  HEYNLTPHSLYAAVSVGLETETIIAVLSKLSKTKLPKEMIDFIHASTANYGKVKLVLKKN 166

Query: 363  RYFVESPFPEVLKRLRKDNVISKAQINFEDSHGV---------------HEDLLNRAELA 497
            RYF+ESPFPEVLKRL  D+ I KA+I+ E  HG                H++L+N  ++A
Sbjct: 167  RYFIESPFPEVLKRLLADDAIGKARISSEGMHGKDGFTVSKPVNEIEGGHDELINEVDVA 226

Query: 498  TTIE-KETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDYRNDTVNPDLNIALKPQKHER 674
               E KETHSFEIDP+QVENVKQRCLPNALNYPM+EEYD+RNDTVNPDL++ LKPQ   R
Sbjct: 227  AAAEEKETHSFEIDPAQVENVKQRCLPNALNYPMMEEYDFRNDTVNPDLDMELKPQAQPR 286

Query: 675  PYQQTSLSKMFRNGRARSGIIVLPCGAGKSLVGVSAACRVKKSCLCLATNAVSVDQWAFQ 854
            PYQ+ SLSKMF NGRARSGIIVLPCGAGKSLVGVSAA R+KKSCLCLATNAVSVDQWAFQ
Sbjct: 287  PYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASRIKKSCLCLATNAVSVDQWAFQ 346

Query: 855  FKLWSTIEDDNISCFTSDNKEKFRGLAGVVVTTYNMIAFGGXXXXXXXXXXXXXXXXXWG 1034
            FKLWSTI ++ I  FTSD+KE+FRG  GVVVTTYNM+AFGG                 WG
Sbjct: 347  FKLWSTIREEQICRFTSDSKERFRGNVGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWG 406

Query: 1035 LLLMDEVHVVPAHMFRKVISI 1097
            LLLMDEVHVVPAHMFRKVISI
Sbjct: 407  LLLMDEVHVVPAHMFRKVISI 427


>ref|XP_002870639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297316475|gb|EFH46898.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 779

 Score =  577 bits (1486), Expect = e-162
 Identities = 294/381 (77%), Positives = 315/381 (82%), Gaps = 16/381 (4%)
 Frame = +3

Query: 3    EREIKKRDFTQLELKPDHVNRPLWACADGRIILETFSPLYKQAYDFLIAIAEPVCRPESM 182
            E E KKRDFT+LELKPDHVNRPLWACADGRI LETFSPLYKQAYDFLIAIAEPVCRPESM
Sbjct: 56   EGEEKKRDFTKLELKPDHVNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESM 115

Query: 183  HEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPSEIIDFIHGSTANYGKVKLVLKKN 362
            HEYNLTPHSLYAAVSVGLETETI+SVLNKLSKTKLP E+I+FIH STANYGKVKLVLKKN
Sbjct: 116  HEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIEFIHASTANYGKVKLVLKKN 175

Query: 363  RYFVESPFPEVLKRLRKDNVISKAQINFEDSHGVHE---------------DLLNRAELA 497
            RYF+ESPFPEVLKRL  D+VI++A+ + E  +G                  +LLN AELA
Sbjct: 176  RYFIESPFPEVLKRLLSDDVINRARFSSEPYYGGDGFTIGKTSGELEAGPGELLNEAELA 235

Query: 498  TTIE-KETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDYRNDTVNPDLNIALKPQKHER 674
               E KETHSFEIDP+QVENVKQRCLPNALNYPMLEEYD+RND VNPDL++ LKP    R
Sbjct: 236  AAAEEKETHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDNVNPDLDMELKPHAQPR 295

Query: 675  PYQQTSLSKMFRNGRARSGIIVLPCGAGKSLVGVSAACRVKKSCLCLATNAVSVDQWAFQ 854
            PYQ+ SLSKMF NGRARSGIIVLPCGAGKSLVGVSAA R+KKSCLCLATNAVSVDQWAFQ
Sbjct: 296  PYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAARIKKSCLCLATNAVSVDQWAFQ 355

Query: 855  FKLWSTIEDDNISCFTSDNKEKFRGLAGVVVTTYNMIAFGGXXXXXXXXXXXXXXXXXWG 1034
            FKLWSTI DD I  FTSD+KE+FRG AGVVVTTYNM+AF G                 WG
Sbjct: 356  FKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFSGKRSEESEKIIEEMRNREWG 415

Query: 1035 LLLMDEVHVVPAHMFRKVISI 1097
            LLLMDEVHVVPAHMFRKVISI
Sbjct: 416  LLLMDEVHVVPAHMFRKVISI 436


>ref|XP_006368764.1| hypothetical protein POPTR_0001s09670g [Populus trichocarpa]
            gi|550346909|gb|ERP65333.1| hypothetical protein
            POPTR_0001s09670g [Populus trichocarpa]
          Length = 783

 Score =  576 bits (1485), Expect = e-162
 Identities = 297/395 (75%), Positives = 315/395 (79%), Gaps = 30/395 (7%)
 Frame = +3

Query: 3    EREIKKRDFTQLELKPDHVNRPLWACADGRIILETFSPLYKQAYDFLIAIAEPVCRPESM 182
            E E KKRDF++LELKPDH NRPLWACADGRI LETFS LYKQAYDFLIAIAEPVCRPESM
Sbjct: 45   ETEGKKRDFSKLELKPDHANRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESM 104

Query: 183  HEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPSEIIDFIHGSTANYGKVKLVLKKN 362
            HEYNLTPHSLYAAVSVGLETETI+SVLNKLSKTKLP E+IDFIHGSTANYGKVKLVLKKN
Sbjct: 105  HEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIDFIHGSTANYGKVKLVLKKN 164

Query: 363  RYFVESPFPE--------------VLKRLRKDNVISKAQINFEDSHGV------------ 464
            RYF+ESPF E              VLK+L KD VI+KA+I  E SHG             
Sbjct: 165  RYFIESPFTEASWFFVSGFPPLSLVLKKLLKDEVIAKARIQPESSHGTEGFTISKAAGEI 224

Query: 465  ---HEDLLNRAELATTIE-KETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDYRNDTVN 632
               H+ LLN AELA   E KETHSFE+DPSQVENVKQRCLPNALNYPMLEEYD+RNDTVN
Sbjct: 225  GTSHDGLLNEAELAAAAEEKETHSFEVDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVN 284

Query: 633  PDLNIALKPQKHERPYQQTSLSKMFRNGRARSGIIVLPCGAGKSLVGVSAACRVKKSCLC 812
            PDLN+ LKP    RPYQ+ SLSKMF NGRARSGIIVLPCGAGKSLVGVSAACR+KKSCLC
Sbjct: 285  PDLNMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLC 344

Query: 813  LATNAVSVDQWAFQFKLWSTIEDDNISCFTSDNKEKFRGLAGVVVTTYNMIAFGGXXXXX 992
            LATNAVSVDQWAFQF LWS I  D I  FTSD+KE+F+G AGVVVTTYNM+AFGG     
Sbjct: 345  LATNAVSVDQWAFQFSLWSDISQDQICRFTSDSKERFKGNAGVVVTTYNMVAFGGKRSEE 404

Query: 993  XXXXXXXXXXXXWGLLLMDEVHVVPAHMFRKVISI 1097
                        WGLLLMDEVHVVPAHMFRKVISI
Sbjct: 405  SEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISI 439


>ref|XP_002299520.2| DNA repair protein and transcription factor [Populus trichocarpa]
            gi|550346908|gb|EEE84325.2| DNA repair protein and
            transcription factor [Populus trichocarpa]
          Length = 803

 Score =  576 bits (1485), Expect = e-162
 Identities = 297/395 (75%), Positives = 315/395 (79%), Gaps = 30/395 (7%)
 Frame = +3

Query: 3    EREIKKRDFTQLELKPDHVNRPLWACADGRIILETFSPLYKQAYDFLIAIAEPVCRPESM 182
            E E KKRDF++LELKPDH NRPLWACADGRI LETFS LYKQAYDFLIAIAEPVCRPESM
Sbjct: 45   ETEGKKRDFSKLELKPDHANRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESM 104

Query: 183  HEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPSEIIDFIHGSTANYGKVKLVLKKN 362
            HEYNLTPHSLYAAVSVGLETETI+SVLNKLSKTKLP E+IDFIHGSTANYGKVKLVLKKN
Sbjct: 105  HEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIDFIHGSTANYGKVKLVLKKN 164

Query: 363  RYFVESPFPE--------------VLKRLRKDNVISKAQINFEDSHGV------------ 464
            RYF+ESPF E              VLK+L KD VI+KA+I  E SHG             
Sbjct: 165  RYFIESPFTEASWFFVSGFPPLSLVLKKLLKDEVIAKARIQPESSHGTEGFTISKAAGEI 224

Query: 465  ---HEDLLNRAELATTIE-KETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDYRNDTVN 632
               H+ LLN AELA   E KETHSFE+DPSQVENVKQRCLPNALNYPMLEEYD+RNDTVN
Sbjct: 225  GTSHDGLLNEAELAAAAEEKETHSFEVDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVN 284

Query: 633  PDLNIALKPQKHERPYQQTSLSKMFRNGRARSGIIVLPCGAGKSLVGVSAACRVKKSCLC 812
            PDLN+ LKP    RPYQ+ SLSKMF NGRARSGIIVLPCGAGKSLVGVSAACR+KKSCLC
Sbjct: 285  PDLNMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLC 344

Query: 813  LATNAVSVDQWAFQFKLWSTIEDDNISCFTSDNKEKFRGLAGVVVTTYNMIAFGGXXXXX 992
            LATNAVSVDQWAFQF LWS I  D I  FTSD+KE+F+G AGVVVTTYNM+AFGG     
Sbjct: 345  LATNAVSVDQWAFQFSLWSDISQDQICRFTSDSKERFKGNAGVVVTTYNMVAFGGKRSEE 404

Query: 993  XXXXXXXXXXXXWGLLLMDEVHVVPAHMFRKVISI 1097
                        WGLLLMDEVHVVPAHMFRKVISI
Sbjct: 405  SEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISI 439