BLASTX nr result
ID: Zingiber23_contig00009970
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00009970
(379 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274515.2| PREDICTED: zinc finger CCCH domain-containin... 99 7e-19
gb|EOY32217.1| Zinc finger C-x8-C-x5-C-x3-H type family protein,... 96 5e-18
gb|EOY32216.1| Zinc finger C-x8-C-x5-C-x3-H type family protein,... 96 5e-18
gb|EOY32212.1| Zinc finger C-x8-C-x5-C-x3-H type family protein,... 96 5e-18
ref|XP_006345234.1| PREDICTED: zinc finger CCCH domain-containin... 96 6e-18
dbj|BAO49736.1| nuclear pore complex protein CG1a [Nicotiana ben... 95 8e-18
ref|XP_004251711.1| PREDICTED: zinc finger CCCH domain-containin... 95 8e-18
dbj|BAO49737.1| nuclear pore complex protein CG1b [Nicotiana ben... 92 9e-17
ref|XP_003563526.1| PREDICTED: zinc finger CCCH domain-containin... 87 2e-15
ref|XP_006656457.1| PREDICTED: zinc finger CCCH domain-containin... 86 5e-15
gb|ACN33804.1| unknown [Zea mays] gi|408690338|gb|AFU81629.1| C3... 86 7e-15
ref|NP_001147895.1| nucleic acid binding protein [Zea mays] gi|1... 86 7e-15
gb|AET06166.1| CCCH-type zinc finger protein LIC [Zea mays] 85 9e-15
ref|NP_001058507.1| Os06g0704300 [Oryza sativa Japonica Group] g... 82 6e-14
gb|EEE66321.1| hypothetical protein OsJ_22559 [Oryza sativa Japo... 82 6e-14
ref|XP_002437553.1| hypothetical protein SORBIDRAFT_10g029250 [S... 82 7e-14
dbj|BAJ96654.1| predicted protein [Hordeum vulgare subsp. vulgare] 82 9e-14
gb|EEC81277.1| hypothetical protein OsI_24382 [Oryza sativa Indi... 82 9e-14
ref|XP_004966351.1| PREDICTED: zinc finger CCCH domain-containin... 81 1e-13
ref|XP_006390319.1| hypothetical protein EUTSA_v10018711mg [Eutr... 80 4e-13
>ref|XP_002274515.2| PREDICTED: zinc finger CCCH domain-containing protein 16-like
[Vitis vinifera]
Length = 383
Score = 98.6 bits (244), Expect = 7e-19
Identities = 45/66 (68%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Frame = +3
Query: 171 MNRKKELCRNFQRGSCQYGSRCKFLHTTQQEAKPNPYGFGNQSTIHFPNT-THQQKPNPY 347
MNRKKE CRNFQRGSCQYG RCKFLH TQQ+ KPN GFG Q++ +F +T QQ+ NP+
Sbjct: 1 MNRKKEPCRNFQRGSCQYGERCKFLHVTQQQPKPNVSGFGAQTSSNFQHTNVQQQRSNPF 60
Query: 348 GFGVQN 365
GFGVQ+
Sbjct: 61 GFGVQS 66
>gb|EOY32217.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform
6, partial [Theobroma cacao]
Length = 344
Score = 95.9 bits (237), Expect = 5e-18
Identities = 44/68 (64%), Positives = 50/68 (73%)
Frame = +3
Query: 171 MNRKKELCRNFQRGSCQYGSRCKFLHTTQQEAKPNPYGFGNQSTIHFPNTTHQQKPNPYG 350
M+ KKE CRNFQRGSCQYG RCKFLH QQ+ K N +GFG Q++ H QQKPNP+G
Sbjct: 1 MHYKKEPCRNFQRGSCQYGERCKFLHVIQQQPKSNAFGFGTQASSH-----QQQKPNPFG 55
Query: 351 FGVQNKPQ 374
FGVQN Q
Sbjct: 56 FGVQNNVQ 63
>gb|EOY32216.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform
5 [Theobroma cacao]
Length = 284
Score = 95.9 bits (237), Expect = 5e-18
Identities = 44/68 (64%), Positives = 50/68 (73%)
Frame = +3
Query: 171 MNRKKELCRNFQRGSCQYGSRCKFLHTTQQEAKPNPYGFGNQSTIHFPNTTHQQKPNPYG 350
M+ KKE CRNFQRGSCQYG RCKFLH QQ+ K N +GFG Q++ H QQKPNP+G
Sbjct: 1 MHYKKEPCRNFQRGSCQYGERCKFLHVIQQQPKSNAFGFGTQASSH-----QQQKPNPFG 55
Query: 351 FGVQNKPQ 374
FGVQN Q
Sbjct: 56 FGVQNNVQ 63
>gb|EOY32212.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform
1 [Theobroma cacao] gi|508784957|gb|EOY32213.1| Zinc
finger C-x8-C-x5-C-x3-H type family protein, putative
isoform 1 [Theobroma cacao]
Length = 393
Score = 95.9 bits (237), Expect = 5e-18
Identities = 44/68 (64%), Positives = 50/68 (73%)
Frame = +3
Query: 171 MNRKKELCRNFQRGSCQYGSRCKFLHTTQQEAKPNPYGFGNQSTIHFPNTTHQQKPNPYG 350
M+ KKE CRNFQRGSCQYG RCKFLH QQ+ K N +GFG Q++ H QQKPNP+G
Sbjct: 1 MHYKKEPCRNFQRGSCQYGERCKFLHVIQQQPKSNAFGFGTQASSH-----QQQKPNPFG 55
Query: 351 FGVQNKPQ 374
FGVQN Q
Sbjct: 56 FGVQNNVQ 63
>ref|XP_006345234.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
[Solanum tuberosum]
Length = 425
Score = 95.5 bits (236), Expect = 6e-18
Identities = 45/69 (65%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Frame = +3
Query: 171 MNRKKELCRNFQRGSCQYGSRCKFLHTTQQEAKPNPYGFGNQSTIHFPNTTHQQ-KPNPY 347
M +KE CRNF RGSCQYG RCKFLH QQ+ KPNP+GFG+QS+ +F NT QQ K NP+
Sbjct: 1 MPPRKEPCRNFMRGSCQYGERCKFLHAAQQQPKPNPFGFGSQSS-NFQNTNMQQTKSNPF 59
Query: 348 GFGVQNKPQ 374
GFGVQ+ Q
Sbjct: 60 GFGVQSNSQ 68
>dbj|BAO49736.1| nuclear pore complex protein CG1a [Nicotiana benthamiana]
Length = 429
Score = 95.1 bits (235), Expect = 8e-18
Identities = 46/69 (66%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Frame = +3
Query: 171 MNRKKELCRNFQRGSCQYGSRCKFLHTTQQEAKPNPYGFGNQSTIHFPNTTHQQ-KPNPY 347
M +KE CRNF RGSCQYG RCKFLH +QQ+ KPNP+GFG+Q + +F NT QQ K NPY
Sbjct: 1 MPPRKEPCRNFLRGSCQYGDRCKFLHVSQQQPKPNPFGFGSQPS-NFQNTNLQQTKSNPY 59
Query: 348 GFGVQNKPQ 374
GFGVQN Q
Sbjct: 60 GFGVQNNFQ 68
>ref|XP_004251711.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
[Solanum lycopersicum]
Length = 429
Score = 95.1 bits (235), Expect = 8e-18
Identities = 45/69 (65%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Frame = +3
Query: 171 MNRKKELCRNFQRGSCQYGSRCKFLHTTQQEAKPNPYGFGNQSTIHFPNTTHQQ-KPNPY 347
M +KE CRNF RGSCQYG RCKFLH QQ+ KPNP+GFG+QST +F +T QQ K NP+
Sbjct: 1 MPPRKEPCRNFMRGSCQYGERCKFLHAAQQQPKPNPFGFGSQST-NFQSTNMQQTKSNPF 59
Query: 348 GFGVQNKPQ 374
GFGVQ+ Q
Sbjct: 60 GFGVQSNSQ 68
>dbj|BAO49737.1| nuclear pore complex protein CG1b [Nicotiana benthamiana]
Length = 431
Score = 91.7 bits (226), Expect = 9e-17
Identities = 45/69 (65%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Frame = +3
Query: 171 MNRKKELCRNFQRGSCQYGSRCKFLHTTQQEAKPNPYGFGNQSTIHFPNTTHQQ-KPNPY 347
M +KE CRNF RGSCQYG RCKFLH QQ+ KPN +GFG+Q + +F NT QQ K NPY
Sbjct: 1 MPPRKEPCRNFLRGSCQYGERCKFLHVAQQQPKPNTFGFGSQPS-NFQNTNLQQTKSNPY 59
Query: 348 GFGVQNKPQ 374
GFGVQN Q
Sbjct: 60 GFGVQNNFQ 68
>ref|XP_003563526.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
[Brachypodium distachyon]
Length = 386
Score = 87.4 bits (215), Expect = 2e-15
Identities = 41/72 (56%), Positives = 52/72 (72%), Gaps = 8/72 (11%)
Frame = +3
Query: 171 MNRKKELCRNFQRGSCQYGSRCKFLHTT-----QQEAKPNPYGFGNQSTIHFPNTTHQQ- 332
MNR++ELCRNFQRGSC+YG++C+F+H + QQ AKPNP+GFG S P T Q
Sbjct: 1 MNRRQELCRNFQRGSCKYGAQCRFVHASSNQQQQQAAKPNPFGFGTSSRQQQPFGTQSQQ 60
Query: 333 --KPNPYGFGVQ 362
+PNP+GFGVQ
Sbjct: 61 QPQPNPFGFGVQ 72
>ref|XP_006656457.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
[Oryza brachyantha]
Length = 393
Score = 85.9 bits (211), Expect = 5e-15
Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 11/75 (14%)
Frame = +3
Query: 171 MNRKKELCRNFQRGSCQYGSRCKFLHTT---QQEAKPNPYGFGNQSTIHFPN-------- 317
M+R++E+CRNFQRGSC+YG++C++LH + QQ+A+PNP+GFG S P+
Sbjct: 1 MSRRQEICRNFQRGSCKYGAQCRYLHASPHQQQQARPNPFGFGTGSRQQQPSFGSQFQQQ 60
Query: 318 TTHQQKPNPYGFGVQ 362
QQKPNP+GFGVQ
Sbjct: 61 QQQQQKPNPFGFGVQ 75
>gb|ACN33804.1| unknown [Zea mays] gi|408690338|gb|AFU81629.1| C3H-type
transcription factor, partial [Zea mays subsp. mays]
Length = 401
Score = 85.5 bits (210), Expect = 7e-15
Identities = 42/76 (55%), Positives = 53/76 (69%), Gaps = 12/76 (15%)
Frame = +3
Query: 171 MNRKKELCRNFQRGSCQYGSRCKFLHTT---QQEAKPNPYGFG--------NQSTIHFP- 314
M+R++ELCRNFQRGSC+YGS C+F+H + QQ+AKPNP+GFG QS+
Sbjct: 1 MDRRQELCRNFQRGSCKYGSHCRFVHASSQQQQQAKPNPFGFGLGSRQQQQQQSSFRAQF 60
Query: 315 NTTHQQKPNPYGFGVQ 362
QQKPNP+GFGVQ
Sbjct: 61 QQQQQQKPNPFGFGVQ 76
>ref|NP_001147895.1| nucleic acid binding protein [Zea mays] gi|195614438|gb|ACG29049.1|
nucleic acid binding protein [Zea mays]
gi|413934834|gb|AFW69385.1| putative zinc finger
C-x8-C-x5-C-x3-H type family protein [Zea mays]
Length = 401
Score = 85.5 bits (210), Expect = 7e-15
Identities = 42/76 (55%), Positives = 53/76 (69%), Gaps = 12/76 (15%)
Frame = +3
Query: 171 MNRKKELCRNFQRGSCQYGSRCKFLHTT---QQEAKPNPYGFG--------NQSTIHFP- 314
M+R++ELCRNFQRGSC+YGS C+F+H + QQ+AKPNP+GFG QS+
Sbjct: 1 MDRRQELCRNFQRGSCKYGSHCRFVHASSQQQQQAKPNPFGFGLGSRQQQQQQSSFRAQF 60
Query: 315 NTTHQQKPNPYGFGVQ 362
QQKPNP+GFGVQ
Sbjct: 61 QQQQQQKPNPFGFGVQ 76
>gb|AET06166.1| CCCH-type zinc finger protein LIC [Zea mays]
Length = 401
Score = 85.1 bits (209), Expect = 9e-15
Identities = 42/76 (55%), Positives = 52/76 (68%), Gaps = 12/76 (15%)
Frame = +3
Query: 171 MNRKKELCRNFQRGSCQYGSRCKFLHTT---QQEAKPNPYGFG--------NQSTIHFP- 314
M R++ELCRNFQRGSC+YGS C+F+H + QQ+AKPNP+GFG QS+
Sbjct: 1 MERRQELCRNFQRGSCKYGSHCRFVHASSQQQQQAKPNPFGFGLGSRQQQQQQSSFRAQF 60
Query: 315 NTTHQQKPNPYGFGVQ 362
QQKPNP+GFGVQ
Sbjct: 61 QQQQQQKPNPFGFGVQ 76
>ref|NP_001058507.1| Os06g0704300 [Oryza sativa Japonica Group]
gi|75252808|sp|Q5Z807.1|C3H46_ORYSJ RecName: Full=Zinc
finger CCCH domain-containing protein 46; Short=OsC3H46
gi|53791927|dbj|BAD54049.1| zinc finger protein-like
[Oryza sativa Japonica Group]
gi|113596547|dbj|BAF20421.1| Os06g0704300 [Oryza sativa
Japonica Group]
Length = 390
Score = 82.4 bits (202), Expect = 6e-14
Identities = 39/79 (49%), Positives = 53/79 (67%), Gaps = 15/79 (18%)
Frame = +3
Query: 171 MNRKKELCRNFQRGSCQYGSRCKFLHTT------QQEAKPNPYGFGNQS---------TI 305
M+R++E+CRNFQRGSC+YG++C++LH + QQ+AKPNP+GFG S +
Sbjct: 1 MSRRQEICRNFQRGSCKYGAQCRYLHASPHQQQQQQQAKPNPFGFGTGSRQQQQPSFGSQ 60
Query: 306 HFPNTTHQQKPNPYGFGVQ 362
QQKPNP+GFGVQ
Sbjct: 61 FQQQQQQQQKPNPFGFGVQ 79
>gb|EEE66321.1| hypothetical protein OsJ_22559 [Oryza sativa Japonica Group]
Length = 1360
Score = 82.4 bits (202), Expect = 6e-14
Identities = 39/79 (49%), Positives = 53/79 (67%), Gaps = 15/79 (18%)
Frame = +3
Query: 171 MNRKKELCRNFQRGSCQYGSRCKFLHTT------QQEAKPNPYGFGNQS---------TI 305
M+R++E+CRNFQRGSC+YG++C++LH + QQ+AKPNP+GFG S +
Sbjct: 1 MSRRQEICRNFQRGSCKYGAQCRYLHASPHQQQQQQQAKPNPFGFGTGSRQQQQPSFGSQ 60
Query: 306 HFPNTTHQQKPNPYGFGVQ 362
QQKPNP+GFGVQ
Sbjct: 61 FQQQQQQQQKPNPFGFGVQ 79
>ref|XP_002437553.1| hypothetical protein SORBIDRAFT_10g029250 [Sorghum bicolor]
gi|241915776|gb|EER88920.1| hypothetical protein
SORBIDRAFT_10g029250 [Sorghum bicolor]
Length = 412
Score = 82.0 bits (201), Expect = 7e-14
Identities = 40/87 (45%), Positives = 55/87 (63%), Gaps = 23/87 (26%)
Frame = +3
Query: 171 MNRKKELCRNFQRGSCQYGSRCKFLHTT---QQEAKPNPYGFGN---------------- 293
M+R++ELCRNFQRGSC+YG++C+F+H + QQ++KPNP+GFG+
Sbjct: 1 MSRRQELCRNFQRGSCKYGAQCRFVHASSQQQQQSKPNPFGFGSQQQQANTNPFGFGSGS 60
Query: 294 ----QSTIHFPNTTHQQKPNPYGFGVQ 362
QS+ QQKPNP+GFGVQ
Sbjct: 61 RQQQQSSFGAQFQQQQQKPNPFGFGVQ 87
>dbj|BAJ96654.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 407
Score = 81.6 bits (200), Expect = 9e-14
Identities = 40/79 (50%), Positives = 50/79 (63%), Gaps = 15/79 (18%)
Frame = +3
Query: 171 MNRKKELCRNFQRGSCQYGSRCKFLHTT------QQEAKPNPYGFGNQSTIHFPNT---- 320
MNR+ ELCRN+QRGSC+YG +C+F+H QQ+AKPNP+GFG S +
Sbjct: 1 MNRRPELCRNYQRGSCKYGEQCRFVHANSNQHQQQQQAKPNPFGFGAGSRQQPQQSFGAQ 60
Query: 321 -----THQQKPNPYGFGVQ 362
QQKPNP+GFGVQ
Sbjct: 61 SQQFQQQQQKPNPFGFGVQ 79
>gb|EEC81277.1| hypothetical protein OsI_24382 [Oryza sativa Indica Group]
Length = 1267
Score = 81.6 bits (200), Expect = 9e-14
Identities = 39/81 (48%), Positives = 53/81 (65%), Gaps = 17/81 (20%)
Frame = +3
Query: 171 MNRKKELCRNFQRGSCQYGSRCKFLHTT--------QQEAKPNPYGFGNQS--------- 299
M+R++E+CRNFQRGSC+YG++C++LH + QQ+AKPNP+GFG S
Sbjct: 1 MSRRQEICRNFQRGSCKYGAQCRYLHASPHQQQQQQQQQAKPNPFGFGTGSRQQQQPSFG 60
Query: 300 TIHFPNTTHQQKPNPYGFGVQ 362
+ QQKPNP+GFGVQ
Sbjct: 61 SQFQQQQQQQQKPNPFGFGVQ 81
>ref|XP_004966351.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
[Setaria italica]
Length = 395
Score = 81.3 bits (199), Expect = 1e-13
Identities = 40/85 (47%), Positives = 52/85 (61%), Gaps = 21/85 (24%)
Frame = +3
Query: 171 MNRKKELCRNFQRGSCQYGSRCKFLHTT--------QQEAKPNPYGFGNQSTIHFPNTT- 323
MNR+ ELCRNFQRGSC+YG++C+F+H + QQ+ KPNP+GFG+ S +
Sbjct: 1 MNRRHELCRNFQRGSCKYGAQCRFVHASSQQQQQQQQQQVKPNPFGFGSGSRQQQQQPSF 60
Query: 324 ------------HQQKPNPYGFGVQ 362
QQKPNP+GFGVQ
Sbjct: 61 GAQFQQQQQQQQQQQKPNPFGFGVQ 85
>ref|XP_006390319.1| hypothetical protein EUTSA_v10018711mg [Eutrema salsugineum]
gi|557086753|gb|ESQ27605.1| hypothetical protein
EUTSA_v10018711mg [Eutrema salsugineum]
Length = 380
Score = 79.7 bits (195), Expect = 4e-13
Identities = 39/68 (57%), Positives = 48/68 (70%), Gaps = 4/68 (5%)
Frame = +3
Query: 180 KKELCRNFQRGSCQYGSRCKFLHTTQQEAKP-NPYGFGNQSTIHFPNTTHQQKPNPYGFG 356
+KELCRNFQRGSC++G C+FLH Q+AKP NP+GFG QS P Q+ NP+GFG
Sbjct: 2 RKELCRNFQRGSCRFGEGCRFLH--PQQAKPNNPFGFGTQSRDQQPQQQQQKSSNPFGFG 59
Query: 357 VQ---NKP 371
VQ N+P
Sbjct: 60 VQGGSNRP 67