BLASTX nr result
ID: Zingiber23_contig00009790
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00009790
(268 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY32024.1| Pentatricopeptide repeat (PPR) superfamily protei... 109 4e-22
ref|XP_006827738.1| hypothetical protein AMTR_s00009p00261890 [A... 106 4e-21
emb|CBI20034.3| unnamed protein product [Vitis vinifera] 103 2e-20
ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20
emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera] 103 2e-20
ref|XP_006347731.1| PREDICTED: pentatricopeptide repeat-containi... 102 5e-20
ref|XP_004230081.1| PREDICTED: pentatricopeptide repeat-containi... 102 5e-20
ref|XP_006492325.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19
ref|XP_006444484.1| hypothetical protein CICLE_v10019225mg [Citr... 100 2e-19
ref|XP_004301807.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19
ref|XP_006290311.1| hypothetical protein CARUB_v10019235mg [Caps... 100 3e-19
ref|XP_002515292.1| pentatricopeptide repeat-containing protein,... 100 3e-19
ref|NP_191806.1| pentatricopeptide repeat-containing protein [Ar... 99 5e-19
ref|XP_006402372.1| hypothetical protein EUTSA_v10005842mg [Eutr... 99 5e-19
ref|XP_002878464.1| pentatricopeptide repeat-containing protein ... 99 5e-19
ref|XP_004962378.1| PREDICTED: pentatricopeptide repeat-containi... 99 8e-19
ref|NP_191813.1| pentatricopeptide repeat-containing protein [Ar... 99 8e-19
ref|XP_003566348.1| PREDICTED: pentatricopeptide repeat-containi... 99 8e-19
gb|EEE63384.1| hypothetical protein OsJ_18196 [Oryza sativa Japo... 99 8e-19
gb|EAY97680.1| hypothetical protein OsI_19602 [Oryza sativa Indi... 99 8e-19
>gb|EOY32024.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 627
Score = 109 bits (272), Expect = 4e-22
Identities = 50/103 (48%), Positives = 74/103 (71%), Gaps = 16/103 (15%)
Frame = +3
Query: 3 QMKKSMAIFQMMERFNFKAGLETFNCLIEALAKVKLGTEAQALFEKMKDQYPP------- 161
+ KK++ IF++M+++ +KAG++T NCL+++L +VKL EAQALFEK++D++ P
Sbjct: 266 ERKKAIGIFELMKKYKYKAGVDTINCLLDSLVRVKLAKEAQALFEKLRDRFTPNLSTYTI 325
Query: 162 ---------DLMEAGRVWNEMLGMGFKPDVVVYNTMINGLIRA 263
+LMEAGRVWNEML GFKPD+V +N MI GL+R+
Sbjct: 326 LLNGWCRVRNLMEAGRVWNEMLDKGFKPDIVAHNVMIEGLLRS 368
>ref|XP_006827738.1| hypothetical protein AMTR_s00009p00261890 [Amborella trichopoda]
gi|548832358|gb|ERM95154.1| hypothetical protein
AMTR_s00009p00261890 [Amborella trichopoda]
Length = 575
Score = 106 bits (264), Expect = 4e-21
Identities = 51/100 (51%), Positives = 70/100 (70%), Gaps = 16/100 (16%)
Frame = +3
Query: 3 QMKKSMAIFQMMERFNFKAGLETFNCLIEALAKVKLGTEAQALFEKMKDQYPPD------ 164
+MKK++A+F++M R F+AG+ TFN LI++LA+ KLG EAQ LFEKMKDQ+ PD
Sbjct: 213 EMKKAVAMFELMGRHGFEAGIMTFNKLIDSLARAKLGKEAQILFEKMKDQFNPDLRTYSI 272
Query: 165 ----------LMEAGRVWNEMLGMGFKPDVVVYNTMINGL 254
L EAG++WN+M+ GF+PD+V YNTM+ GL
Sbjct: 273 LLFGWSKVKNLSEAGKIWNDMIDKGFRPDIVAYNTMLEGL 312
>emb|CBI20034.3| unnamed protein product [Vitis vinifera]
Length = 596
Score = 103 bits (258), Expect = 2e-20
Identities = 45/102 (44%), Positives = 72/102 (70%), Gaps = 16/102 (15%)
Frame = +3
Query: 3 QMKKSMAIFQMMERFNFKAGLETFNCLIEALAKVKLGTEAQALFEKMKDQYPP------- 161
+ KK++ +F++M+R+NF AG++T NCL++ L + KLG EAQALFEK++D++ P
Sbjct: 273 ERKKAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDRFTPNLRTYTV 332
Query: 162 ---------DLMEAGRVWNEMLGMGFKPDVVVYNTMINGLIR 260
+L+EAGR WNEM+ GFKPD++ ++TM+ GL++
Sbjct: 333 LLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLK 374
>ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Vitis vinifera]
Length = 679
Score = 103 bits (258), Expect = 2e-20
Identities = 45/102 (44%), Positives = 72/102 (70%), Gaps = 16/102 (15%)
Frame = +3
Query: 3 QMKKSMAIFQMMERFNFKAGLETFNCLIEALAKVKLGTEAQALFEKMKDQYPP------- 161
+ KK++ +F++M+R+NF AG++T NCL++ L + KLG EAQALFEK++D++ P
Sbjct: 318 ERKKAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDRFTPNLRTYTV 377
Query: 162 ---------DLMEAGRVWNEMLGMGFKPDVVVYNTMINGLIR 260
+L+EAGR WNEM+ GFKPD++ ++TM+ GL++
Sbjct: 378 LLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLK 419
>emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
Length = 927
Score = 103 bits (258), Expect = 2e-20
Identities = 45/102 (44%), Positives = 72/102 (70%), Gaps = 16/102 (15%)
Frame = +3
Query: 3 QMKKSMAIFQMMERFNFKAGLETFNCLIEALAKVKLGTEAQALFEKMKDQYPP------- 161
+ KK++ +F++M+R+NF AG++T NCL++ L + KLG EAQALFEK++D++ P
Sbjct: 318 ERKKAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDRFTPNLRTYTV 377
Query: 162 ---------DLMEAGRVWNEMLGMGFKPDVVVYNTMINGLIR 260
+L+EAGR WNEM+ GFKPD++ ++TM+ GL++
Sbjct: 378 LLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLK 419
>ref|XP_006347731.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Solanum tuberosum]
Length = 687
Score = 102 bits (254), Expect = 5e-20
Identities = 45/102 (44%), Positives = 71/102 (69%), Gaps = 16/102 (15%)
Frame = +3
Query: 3 QMKKSMAIFQMMERFNFKAGLETFNCLIEALAKVKLGTEAQALFEKMKDQYPP------- 161
+ KK++ +F++M+++ FK G+ET NCL++AL + KLG EAQ LFEK++ ++ P
Sbjct: 333 ERKKAIGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQLLFEKLEHRFTPNLLTYTV 392
Query: 162 ---------DLMEAGRVWNEMLGMGFKPDVVVYNTMINGLIR 260
+LM+AG+VWNEM+ GFKPD+V +NTM+ GL++
Sbjct: 393 LLNGWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLLK 434
>ref|XP_004230081.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Solanum lycopersicum]
Length = 691
Score = 102 bits (254), Expect = 5e-20
Identities = 45/102 (44%), Positives = 71/102 (69%), Gaps = 16/102 (15%)
Frame = +3
Query: 3 QMKKSMAIFQMMERFNFKAGLETFNCLIEALAKVKLGTEAQALFEKMKDQYPP------- 161
+ KK++ +F++M+++ FK G+ET NCL++AL + KLG EAQ LFEK++ ++ P
Sbjct: 337 ERKKAIGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQLLFEKLEHRFTPNLQTYTV 396
Query: 162 ---------DLMEAGRVWNEMLGMGFKPDVVVYNTMINGLIR 260
+LM+AG+VWNEM+ GFKPD+V +NTM+ GL++
Sbjct: 397 LLNGWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLLK 438
>ref|XP_006492325.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Citrus sinensis]
Length = 651
Score = 100 bits (250), Expect = 2e-19
Identities = 48/102 (47%), Positives = 69/102 (67%), Gaps = 16/102 (15%)
Frame = +3
Query: 3 QMKKSMAIFQMMERFNFKAGLETFNCLIEALAKVKLGTEAQALFEKMKDQYPP------- 161
+ KK++AIF++M ++ FKAG++T NCL+E L + KL EAQ LF+K+K ++ P
Sbjct: 294 ERKKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHRFTPNLTTYTV 353
Query: 162 ---------DLMEAGRVWNEMLGMGFKPDVVVYNTMINGLIR 260
+LMEAGRVWNEM+ GFKPDVV +N M+ GL++
Sbjct: 354 LLGSWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLK 395
>ref|XP_006444484.1| hypothetical protein CICLE_v10019225mg [Citrus clementina]
gi|557546746|gb|ESR57724.1| hypothetical protein
CICLE_v10019225mg [Citrus clementina]
Length = 653
Score = 100 bits (250), Expect = 2e-19
Identities = 48/102 (47%), Positives = 69/102 (67%), Gaps = 16/102 (15%)
Frame = +3
Query: 3 QMKKSMAIFQMMERFNFKAGLETFNCLIEALAKVKLGTEAQALFEKMKDQYPP------- 161
+ KK++AIF++M ++ FKAG++T NCL+E L + KL EAQ LF+K+K ++ P
Sbjct: 296 ERKKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHRFTPNLTTYTV 355
Query: 162 ---------DLMEAGRVWNEMLGMGFKPDVVVYNTMINGLIR 260
+LMEAGRVWNEM+ GFKPDVV +N M+ GL++
Sbjct: 356 LLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLK 397
>ref|XP_004301807.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 646
Score = 100 bits (249), Expect = 2e-19
Identities = 45/104 (43%), Positives = 70/104 (67%), Gaps = 16/104 (15%)
Frame = +3
Query: 3 QMKKSMAIFQMMERFNFKAGLETFNCLIEALAKVKLGTEAQALFEKMKDQYPP------- 161
+ KK++ IF++M+ +NFK G+ T NCL+++L + KLG E Q LF+++K ++ P
Sbjct: 272 ERKKAVGIFELMKYYNFKYGVNTVNCLLDSLGRAKLGKEMQVLFDRLKGEFTPNLQTYAV 331
Query: 162 ---------DLMEAGRVWNEMLGMGFKPDVVVYNTMINGLIRAH 266
+L+EAGRVWNEM+ GF+PDVV +N M+ GL+R+H
Sbjct: 332 LLDGWCRVKNLLEAGRVWNEMIDKGFEPDVVTHNIMLGGLLRSH 375
>ref|XP_006290311.1| hypothetical protein CARUB_v10019235mg [Capsella rubella]
gi|482559018|gb|EOA23209.1| hypothetical protein
CARUB_v10019235mg [Capsella rubella]
Length = 597
Score = 100 bits (248), Expect = 3e-19
Identities = 43/103 (41%), Positives = 70/103 (67%), Gaps = 16/103 (15%)
Frame = +3
Query: 3 QMKKSMAIFQMMERFNFKAGLETFNCLIEALAKVKLGTEAQALFEKMKDQYPP------- 161
+ KK++ IF++M+++ FK G+ET NCL+++L + KLG EAQ LF+K+K+++ P
Sbjct: 242 ERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTV 301
Query: 162 ---------DLMEAGRVWNEMLGMGFKPDVVVYNTMINGLIRA 263
+LMEA R+WN+M+ G KPD+V +N M+ GL+R+
Sbjct: 302 LLNGWCRVRNLMEAARIWNDMIDQGLKPDIVAHNVMLEGLLRS 344
>ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545772|gb|EEF47276.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 533
Score = 100 bits (248), Expect = 3e-19
Identities = 46/103 (44%), Positives = 71/103 (68%), Gaps = 16/103 (15%)
Frame = +3
Query: 3 QMKKSMAIFQMMERFNFKAGLETFNCLIEALAKVKLGTEAQALFEKMKDQYPP------- 161
+ KK++A+F++M+++N+K G+ET N L+++L + KLG EAQALFE +K ++ P
Sbjct: 178 ERKKAVAMFELMKKYNYKVGVETINHLLDSLGRAKLGKEAQALFENLKGRFTPNLRTYTV 237
Query: 162 ---------DLMEAGRVWNEMLGMGFKPDVVVYNTMINGLIRA 263
+LMEAG VWNEM+ GFKPD+V +N M+ GL+R+
Sbjct: 238 LLNGWCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRS 280
>ref|NP_191806.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181319|sp|Q9LZP3.1|PP293_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g62470, mitochondrial; Flags: Precursor
gi|7340718|emb|CAB82961.1| putative protein [Arabidopsis
thaliana] gi|34365579|gb|AAQ65101.1| At3g62470
[Arabidopsis thaliana] gi|332646835|gb|AEE80356.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 599
Score = 99.4 bits (246), Expect = 5e-19
Identities = 42/103 (40%), Positives = 70/103 (67%), Gaps = 16/103 (15%)
Frame = +3
Query: 3 QMKKSMAIFQMMERFNFKAGLETFNCLIEALAKVKLGTEAQALFEKMKDQYPPDLM---- 170
+ KK++ IF++M+++ FK G+ET NCL+++L + KLG EAQ LF+K+K+++ P++M
Sbjct: 244 ERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTV 303
Query: 171 ------------EAGRVWNEMLGMGFKPDVVVYNTMINGLIRA 263
EA R+WN+M+ G KPD+V +N M+ GL+R+
Sbjct: 304 LLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRS 346
>ref|XP_006402372.1| hypothetical protein EUTSA_v10005842mg [Eutrema salsugineum]
gi|557103471|gb|ESQ43825.1| hypothetical protein
EUTSA_v10005842mg [Eutrema salsugineum]
Length = 611
Score = 99.4 bits (246), Expect = 5e-19
Identities = 43/103 (41%), Positives = 69/103 (66%), Gaps = 16/103 (15%)
Frame = +3
Query: 3 QMKKSMAIFQMMERFNFKAGLETFNCLIEALAKVKLGTEAQALFEKMKDQYPP------- 161
+ KK++ IF++M+++ FK G+ET NCL+++L + KLG EAQ LF+K+K+++ P
Sbjct: 256 ERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNLMTYTV 315
Query: 162 ---------DLMEAGRVWNEMLGMGFKPDVVVYNTMINGLIRA 263
+LMEA R+WN M+ G KPD+V +N M+ GL+R+
Sbjct: 316 LLNGWCRVKNLMEAARIWNHMIDQGLKPDIVAHNVMLEGLLRS 358
>ref|XP_002878464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297324302|gb|EFH54723.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 628
Score = 99.4 bits (246), Expect = 5e-19
Identities = 42/103 (40%), Positives = 70/103 (67%), Gaps = 16/103 (15%)
Frame = +3
Query: 3 QMKKSMAIFQMMERFNFKAGLETFNCLIEALAKVKLGTEAQALFEKMKDQYPPDLM---- 170
+ KK++ IF++M+++ FK G+ET NCL+++L + KLG EAQ LF+K+K+++ P++M
Sbjct: 253 ERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTV 312
Query: 171 ------------EAGRVWNEMLGMGFKPDVVVYNTMINGLIRA 263
EA R+WN+M+ G KPD+V +N M+ GL+R+
Sbjct: 313 LLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRS 355
>ref|XP_004962378.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Setaria italica]
Length = 623
Score = 98.6 bits (244), Expect = 8e-19
Identities = 49/102 (48%), Positives = 68/102 (66%), Gaps = 16/102 (15%)
Frame = +3
Query: 3 QMKKSMAIFQMMERFNFKAGLETFNCLIEALAKVKLGTEAQALFEKMKDQYPPD------ 164
++K ++ +F++M + F G+E+FNCL+ ALA+ LG EA+ +F+KM D+Y PD
Sbjct: 261 EIKNAVGVFELMRKNGFDDGVESFNCLLVALAQEGLGREARQVFDKMHDRYTPDLRSYTA 320
Query: 165 ----------LMEAGRVWNEMLGMGFKPDVVVYNTMINGLIR 260
L+EAGRVWNEML G KPDVVV+NTMI GL+R
Sbjct: 321 LMLAWCNAKNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLR 362
>ref|NP_191813.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214682|sp|Q3EAF8.1|PP294_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g62540, mitochondrial; Flags: Precursor
gi|332646841|gb|AEE80362.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 98.6 bits (244), Expect = 8e-19
Identities = 42/103 (40%), Positives = 70/103 (67%), Gaps = 16/103 (15%)
Frame = +3
Query: 3 QMKKSMAIFQMMERFNFKAGLETFNCLIEALAKVKLGTEAQALFEKMKDQYPPDLM---- 170
+ KK++ IF++M+++ FK G+ET NCL+++L + KLG EAQ LF+K+K+++ P++M
Sbjct: 244 ERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTV 303
Query: 171 ------------EAGRVWNEMLGMGFKPDVVVYNTMINGLIRA 263
EA R+WN+M+ G KPD+V +N M+ GL+R+
Sbjct: 304 LLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRS 346
>ref|XP_003566348.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Brachypodium distachyon]
Length = 649
Score = 98.6 bits (244), Expect = 8e-19
Identities = 49/102 (48%), Positives = 68/102 (66%), Gaps = 16/102 (15%)
Frame = +3
Query: 3 QMKKSMAIFQMMERFNFKAGLETFNCLIEALAKVKLGTEAQALFEKMKDQYPPD------ 164
++K ++ +F+MM F G+E+FNCL+ ALA+ LG EA +F++M+DQY PD
Sbjct: 287 EIKNAVGVFEMMRVHGFDDGVESFNCLLVALAQEGLGKEAARVFDRMRDQYTPDLRSYTA 346
Query: 165 ----------LMEAGRVWNEMLGMGFKPDVVVYNTMINGLIR 260
L+EAGRVWN+ML G KPDVVV+NTMI+GL+R
Sbjct: 347 LMLAWCNARNLVEAGRVWNDMLEKGMKPDVVVHNTMIDGLLR 388
>gb|EEE63384.1| hypothetical protein OsJ_18196 [Oryza sativa Japonica Group]
Length = 378
Score = 98.6 bits (244), Expect = 8e-19
Identities = 49/102 (48%), Positives = 67/102 (65%), Gaps = 16/102 (15%)
Frame = +3
Query: 3 QMKKSMAIFQMMERFNFKAGLETFNCLIEALAKVKLGTEAQALFEKMKDQYPPD------ 164
++K ++ +F+MM F G+E+FNCL+ ALA+ LG EA +F++M+D+Y PD
Sbjct: 16 EIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDRYAPDLRSYTA 75
Query: 165 ----------LMEAGRVWNEMLGMGFKPDVVVYNTMINGLIR 260
L+EAGRVWNEML G KPDVVV+NTMI GL+R
Sbjct: 76 LMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLR 117
>gb|EAY97680.1| hypothetical protein OsI_19602 [Oryza sativa Indica Group]
Length = 586
Score = 98.6 bits (244), Expect = 8e-19
Identities = 49/102 (48%), Positives = 67/102 (65%), Gaps = 16/102 (15%)
Frame = +3
Query: 3 QMKKSMAIFQMMERFNFKAGLETFNCLIEALAKVKLGTEAQALFEKMKDQYPPD------ 164
++K ++ +F+MM F G+E+FNCL+ ALA+ LG EA +F++M+D+Y PD
Sbjct: 270 EIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDRYAPDLRSYTA 329
Query: 165 ----------LMEAGRVWNEMLGMGFKPDVVVYNTMINGLIR 260
L+EAGRVWNEML G KPDVVV+NTMI GL+R
Sbjct: 330 LMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLR 371