BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00009695
         (725 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...   307   2e-81
gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]       302   6e-80
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   299   5e-79
gb|EMJ26639.1| hypothetical protein PRUPE_ppa000422mg [Prunus pe...   299   7e-79
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...   295   1e-77
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...   289   7e-76
ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   280   3e-73
ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   280   3e-73
ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   279   6e-73
gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu...   278   1e-72
ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis...   278   1e-72
gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]       277   2e-72
ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   275   8e-72
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   275   8e-72
gb|ESW09024.1| hypothetical protein PHAVU_009G093700g [Phaseolus...   275   1e-71
ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   275   1e-71
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    275   1e-71
ref|XP_002457941.1| hypothetical protein SORBIDRAFT_03g022880 [S...   274   2e-71
gb|AGU69384.1| RNA-dependendent RNA polymerase 6-like protein [L...   273   5e-71
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     272   7e-71

>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score =  307 bits (787), Expect = 2e-81
 Identities = 147/243 (60%), Positives = 190/243 (78%), Gaps = 2/243 (0%)
 Frame = -3

Query: 723 WKGPDLVVDFLIDPFDGRCKILFSKDTAFSFKGTRDLALIKCNFKLEFLVRDINEVRVYQ 544
           W+GP   VDFL+DPFDG CK LF+KDTAFSFKG    A+IKCNFK+EFLVR+INEVR  +
Sbjct: 152 WRGPSSGVDFLVDPFDGTCKFLFTKDTAFSFKGMPKHAVIKCNFKVEFLVREINEVRQRR 211

Query: 543 DNAPFVMQFQLISAPSVYYRTADDDIYESVPYNLLDDEDPWIRTTDFTPSNAVGRCNSYR 364
           D +  ++  QL S+P VYYRTADDDI E+VP++LLDD+DPWIRTTDFT S A+GRCNSYR
Sbjct: 212 DMSSLILLLQLSSSPFVYYRTADDDIEETVPFDLLDDDDPWIRTTDFTVSGAIGRCNSYR 271

Query: 363 ILFSPRFGVKMQRSLAYLRDRRID--DVRPKHRQIIRDEPNYGVLPVDPFFCIQYKEGIK 190
           I   PR+G K+++++ YLR RR++  +  PK +  +RDEP++G+   DPFFCIQ+KEGI 
Sbjct: 272 ISIPPRYGAKLKKAMDYLRARRVNVLEDSPKWQLRVRDEPDFGLPMSDPFFCIQHKEGID 331

Query: 189 FSTMFLVNALVHKGIVNQHQLTEEFFSLLRQQSDIINESALLDIWSYKRSIFDAPRRLKV 10
           F  MFLVNA++HKGI+NQHQL+++FF LLR Q   IN +AL  I SY+  +FDA +RLK+
Sbjct: 332 FRVMFLVNAVMHKGIINQHQLSDKFFDLLRSQQKDINIAALKHICSYRHPVFDAYQRLKL 391

Query: 9   VQE 1
           V +
Sbjct: 392 VHK 394


>gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
          Length = 1197

 Score =  302 bits (774), Expect = 6e-80
 Identities = 145/243 (59%), Positives = 189/243 (77%), Gaps = 2/243 (0%)
 Frame = -3

Query: 723 WKGPDLVVDFLIDPFDGRCKILFSKDTAFSFKGTRDLALIKCNFKLEFLVRDINEVRVYQ 544
           W+GP   VDFL+DPFDG CK  FS+DTAFSFKGT + A+IKC+FK+EFLVRDINE++ Y 
Sbjct: 152 WRGPPFGVDFLVDPFDGTCKFCFSRDTAFSFKGTTEYAVIKCDFKVEFLVRDINEIKQYT 211

Query: 543 DNAPFVMQFQLISAPSVYYRTADDDIYESVPYNLLDDEDPWIRTTDFTPSNAVGRCNSYR 364
           + +  V+  QL S+P V+YRTADD+I ESVP++LLDD+D WIRTTDFTPS A+GRCN+YR
Sbjct: 212 EPSGLVVFLQLASSPRVWYRTADDEIEESVPFDLLDDDDQWIRTTDFTPSGAIGRCNTYR 271

Query: 363 ILFSPRFGVKMQRSLAYLRDRRI--DDVRPKHRQIIRDEPNYGVLPVDPFFCIQYKEGIK 190
           ++  PR G K++++L YLR++R+  D VR   R  I DEP++G    DPF+CI YKEGI 
Sbjct: 272 VVIRPRHGAKLKKALDYLREQRVPMDYVRWPLR--ISDEPDFGRSMSDPFYCIDYKEGIP 329

Query: 189 FSTMFLVNALVHKGIVNQHQLTEEFFSLLRQQSDIINESALLDIWSYKRSIFDAPRRLKV 10
           F  MFLVNA++HKGI NQHQL+E+FF+LLR Q   +N +AL  I+SY+R +FDA +RLK 
Sbjct: 330 FEIMFLVNAVMHKGIFNQHQLSEDFFNLLRDQPREVNVAALKHIYSYRRPVFDAYKRLKT 389

Query: 9   VQE 1
           V +
Sbjct: 390 VHD 392


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
           gi|223545464|gb|EEF46969.1| RNA-dependent RNA
           polymerase, putative [Ricinus communis]
          Length = 1203

 Score =  299 bits (766), Expect = 5e-79
 Identities = 144/244 (59%), Positives = 185/244 (75%), Gaps = 3/244 (1%)
 Frame = -3

Query: 723 WKGPDLVVDFLIDPFDGRCKILFSKDTAFSFKGTRDLALIKCNFKLEFLVRDINEVRVYQ 544
           W+GP   VDFL+DPFDG+CK  F++DTAFSFKGT + A+I+C+FKLEFLVRDINE++ Y 
Sbjct: 152 WRGPPSGVDFLVDPFDGKCKFCFTRDTAFSFKGTTEHAVIRCDFKLEFLVRDINEIKQYT 211

Query: 543 DNAPFVMQFQLISAPSVYYRTADDDIYESVPYNLLDDEDPWIRTTDFTPSNAVGRCNSYR 364
           D +  V+  QL SAPSV+YRTADDDI   VP++LLDD+DPWIRTTDFTPS A+GRCNSYR
Sbjct: 212 DTSCLVILLQLASAPSVWYRTADDDIEVLVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYR 271

Query: 363 ILFSPRFGVKMQRSLAYLRDRRIDD---VRPKHRQIIRDEPNYGVLPVDPFFCIQYKEGI 193
           +   PR G K++R+L +LR+RR+ +    RP H   +  EP Y +   DPFFCI ++EG+
Sbjct: 272 VSIPPRHGAKLKRALNFLRERRVQEDCLRRPLH---VTAEPEYEMPMSDPFFCIHHEEGV 328

Query: 192 KFSTMFLVNALVHKGIVNQHQLTEEFFSLLRQQSDIINESALLDIWSYKRSIFDAPRRLK 13
            F+ MFLVNA++HKGI NQHQL++ FF LLR Q   +N +AL  I SYK  +FDA +RLK
Sbjct: 329 DFNLMFLVNAVMHKGIFNQHQLSDSFFDLLRNQPLDVNIAALRHICSYKHPVFDAHKRLK 388

Query: 12  VVQE 1
            VQ+
Sbjct: 389 AVQQ 392


>gb|EMJ26639.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica]
          Length = 1196

 Score =  299 bits (765), Expect = 7e-79
 Identities = 141/241 (58%), Positives = 185/241 (76%)
 Frame = -3

Query: 723 WKGPDLVVDFLIDPFDGRCKILFSKDTAFSFKGTRDLALIKCNFKLEFLVRDINEVRVYQ 544
           W+GP   VDF++DPFDG CK  F+ DTAFSFKGT+  A+IKC+FK+EFLVR+I E++ Y 
Sbjct: 151 WRGPPYGVDFIVDPFDGTCKFCFTMDTAFSFKGTKKHAVIKCDFKVEFLVREIAEIKQYT 210

Query: 543 DNAPFVMQFQLISAPSVYYRTADDDIYESVPYNLLDDEDPWIRTTDFTPSNAVGRCNSYR 364
           D +  V+  +L S+P V YRTADDDI +SVP++LLDD+DPWIRTTDFTPS A+GRCNSYR
Sbjct: 211 DTSYLVILLRLTSSPWVSYRTADDDIDQSVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYR 270

Query: 363 ILFSPRFGVKMQRSLAYLRDRRIDDVRPKHRQIIRDEPNYGVLPVDPFFCIQYKEGIKFS 184
           +L  PR G K+++++ YLR+RR+ +V  K    I+DEP++G+   +PFF IQY+EGI F 
Sbjct: 271 VLIPPRHGAKLKKAMNYLRERRVKEVCIKWPPKIQDEPDFGMSNTEPFFSIQYEEGISFE 330

Query: 183 TMFLVNALVHKGIVNQHQLTEEFFSLLRQQSDIINESALLDIWSYKRSIFDAPRRLKVVQ 4
            MFLVNA++HKG VNQHQL++ FF LLR Q   IN +AL  + SY+  +FDA  RLKVVQ
Sbjct: 331 IMFLVNAVMHKGTVNQHQLSDSFFHLLRSQPKEINVAALKHLCSYRSPVFDACERLKVVQ 390

Query: 3   E 1
           +
Sbjct: 391 D 391


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
           gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
           protein [Populus trichocarpa]
          Length = 1198

 Score =  295 bits (755), Expect = 1e-77
 Identities = 136/241 (56%), Positives = 184/241 (76%)
 Frame = -3

Query: 723 WKGPDLVVDFLIDPFDGRCKILFSKDTAFSFKGTRDLALIKCNFKLEFLVRDINEVRVYQ 544
           W+GP   VDFL+DPFDG C+  FS++TAFSFK T + A+IKC+FK+EFLVRDINE++ Y 
Sbjct: 152 WRGPPTGVDFLVDPFDGTCRFCFSRNTAFSFKSTAEHAVIKCDFKVEFLVRDINEIKQYT 211

Query: 543 DNAPFVMQFQLISAPSVYYRTADDDIYESVPYNLLDDEDPWIRTTDFTPSNAVGRCNSYR 364
           + +  V+  QL SAP V+YRTADDDI  SVP++LLDD+DPWIRTTDFT S A+GRC+SYR
Sbjct: 212 ETSCLVLLLQLASAPRVWYRTADDDIEVSVPFDLLDDDDPWIRTTDFTASGAIGRCHSYR 271

Query: 363 ILFSPRFGVKMQRSLAYLRDRRIDDVRPKHRQIIRDEPNYGVLPVDPFFCIQYKEGIKFS 184
           +   PR G K+++++ +L++RR+ +   +    IRDEP++G+   DPFFCI +KEGI F 
Sbjct: 272 VSIPPRHGPKLRKAVDFLKERRVQEEYLRRPIRIRDEPDFGMPMTDPFFCIHHKEGIAFD 331

Query: 183 TMFLVNALVHKGIVNQHQLTEEFFSLLRQQSDIINESALLDIWSYKRSIFDAPRRLKVVQ 4
            +FLVNA++HKGI NQHQL+ +FF LLR Q   +N +AL  I+ Y+R +FDA ++LKV Q
Sbjct: 332 VLFLVNAVMHKGIFNQHQLSNDFFDLLRNQPTEVNVAALKHIYPYRRPVFDAYKKLKVAQ 391

Query: 3   E 1
           E
Sbjct: 392 E 392


>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
           gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
           protein [Populus trichocarpa]
          Length = 1200

 Score =  289 bits (739), Expect = 7e-76
 Identities = 140/244 (57%), Positives = 185/244 (75%), Gaps = 3/244 (1%)
 Frame = -3

Query: 723 WKGPDLVVDFLIDPFDGRCKILFSKDTAFSFKGTRDLALIKCNFKLEFLVRDINEVRVYQ 544
           W+GP   VDFL+DPFDG CK  FS++TAFS K T + A+IKC+FK+EFLVRDINE+  Y 
Sbjct: 152 WRGPPSGVDFLVDPFDGTCKFCFSRNTAFSLKSTSEHAVIKCDFKVEFLVRDINEIIQYT 211

Query: 543 DNAPFVMQFQLISAPSVYYRTADDDIYESVPYNLLDDEDPWIRTTDFTPSNAVGRCNSYR 364
           + +  V+  QL SAP V+YRTADDDI   VP++LLDD+DPWIRTTDFT S A+GRC+SYR
Sbjct: 212 ETSCLVLLLQLASAPWVWYRTADDDIEAWVPFDLLDDDDPWIRTTDFTASGAIGRCHSYR 271

Query: 363 ILFSPRFGVKMQRSLAYLRDRRIDDVRPK-HRQIIR--DEPNYGVLPVDPFFCIQYKEGI 193
           +   PR G K+++++ YL++RR+  ++ + HR+ IR  DEP++G+   DPFFCI +KEGI
Sbjct: 272 VSIPPRHGSKLRKAVKYLKERRVQVLQEENHRRRIRILDEPDFGMPMSDPFFCIHHKEGI 331

Query: 192 KFSTMFLVNALVHKGIVNQHQLTEEFFSLLRQQSDIINESALLDIWSYKRSIFDAPRRLK 13
            F  +FLVNA++HKGI NQHQL+ +FF LLR Q   +N SAL  I +Y+R +F+A RRLK
Sbjct: 332 AFEVLFLVNAVMHKGIFNQHQLSNDFFDLLRNQHTEVNVSALKHICTYRRPVFNAYRRLK 391

Query: 12  VVQE 1
            VQE
Sbjct: 392 AVQE 395


>ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
           max] gi|571459266|ref|XP_006581359.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
           max]
          Length = 1204

 Score =  280 bits (716), Expect = 3e-73
 Identities = 134/243 (55%), Positives = 178/243 (73%), Gaps = 2/243 (0%)
 Frame = -3

Query: 723 WKGPDLVVDFLIDPFDGRCKILFSKDTAFSFKGTRDLALIKCNFKLEFLVRDINEVRVYQ 544
           W+GPD  V FL+DPFDG C+  FS+DTAFSFKG    A+IKC+F++ FLVRDINE++ Y 
Sbjct: 152 WRGPDKGVKFLVDPFDGMCRFCFSRDTAFSFKGIEKKAVIKCDFQVGFLVRDINEIKRYN 211

Query: 543 DNAPFVMQFQLISAPSVYYRTADDDIYESVPYNLLDDEDPWIRTTDFTPSNAVGRCNSYR 364
           D +  V+   L S+P V+YRTADDDI ESVP++LLDD+DPWIRTTDFTPS A+GRCN YR
Sbjct: 212 DTSYLVVLLHLASSPWVWYRTADDDIEESVPFDLLDDDDPWIRTTDFTPSGAIGRCNFYR 271

Query: 363 ILFSPRFGVKMQRSLAYLRDRRIDDVRPKHRQIIR--DEPNYGVLPVDPFFCIQYKEGIK 190
           I   PR G K+ +++ YL+ +R+       +Q +R  +EP++GV   D FF I +++ I 
Sbjct: 272 ISIPPRHGAKLMKAMLYLKGQRVQMQELALKQTLRTLNEPDFGVPMSDAFFYIHFQKDIA 331

Query: 189 FSTMFLVNALVHKGIVNQHQLTEEFFSLLRQQSDIINESALLDIWSYKRSIFDAPRRLKV 10
           F  MFLVNA+VHKGI NQH+L++ FF LL+ Q   +N +AL  + SYKR +FDA +RLK+
Sbjct: 332 FDIMFLVNAIVHKGIFNQHRLSDRFFELLKNQPKELNVAALKHLCSYKRPVFDATKRLKI 391

Query: 9   VQE 1
           VQE
Sbjct: 392 VQE 394


>ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
           max] gi|571449461|ref|XP_006578148.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
           max]
          Length = 1204

 Score =  280 bits (716), Expect = 3e-73
 Identities = 134/243 (55%), Positives = 178/243 (73%), Gaps = 2/243 (0%)
 Frame = -3

Query: 723 WKGPDLVVDFLIDPFDGRCKILFSKDTAFSFKGTRDLALIKCNFKLEFLVRDINEVRVYQ 544
           W+GPD  V FL+DPFDG C+  FS+DTAFSFKG    A+IKC+F++ FLVRDINE+R Y 
Sbjct: 152 WRGPDKGVKFLVDPFDGMCRFCFSRDTAFSFKGIDKKAVIKCDFQVGFLVRDINEIRRYN 211

Query: 543 DNAPFVMQFQLISAPSVYYRTADDDIYESVPYNLLDDEDPWIRTTDFTPSNAVGRCNSYR 364
           D +  V+   L S+P V+YRTADDDI ESVP++LLDD+DPWIRTTDFTPS A+GRCN YR
Sbjct: 212 DTSYLVVLLHLASSPWVWYRTADDDIEESVPFDLLDDDDPWIRTTDFTPSGAIGRCNFYR 271

Query: 363 ILFSPRFGVKMQRSLAYLRDRRIDDVRPKHRQIIR--DEPNYGVLPVDPFFCIQYKEGIK 190
           I   PR G K+ +++ YL+ +R+       +Q +R  +EP++G+   D FF + +++ I 
Sbjct: 272 ISIPPRHGAKLMKAMLYLKGQRVQIQELPLKQTLRTQNEPDFGMPMSDAFFYVHFQKDIA 331

Query: 189 FSTMFLVNALVHKGIVNQHQLTEEFFSLLRQQSDIINESALLDIWSYKRSIFDAPRRLKV 10
           F  MFLVNA+VHKGI NQH+L++ FF LLR Q   +N +AL  + SYKR +FDA +RLK+
Sbjct: 332 FDIMFLVNAIVHKGIFNQHRLSDRFFELLRNQPKELNVAALKHLCSYKRPVFDATKRLKI 391

Query: 9   VQE 1
           VQE
Sbjct: 392 VQE 394


>ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus]
          Length = 1197

 Score =  279 bits (714), Expect = 6e-73
 Identities = 125/241 (51%), Positives = 178/241 (73%)
 Frame = -3

Query: 723 WKGPDLVVDFLIDPFDGRCKILFSKDTAFSFKGTRDLALIKCNFKLEFLVRDINEVRVYQ 544
           W+GP   +DFL+DPFDG CK  F+KDTAFSFK       +KC++K+EF+VRDIN++  Y 
Sbjct: 151 WRGPSSGMDFLVDPFDGTCKFCFTKDTAFSFKDNNKHTFLKCDYKMEFIVRDINQITRYT 210

Query: 543 DNAPFVMQFQLISAPSVYYRTADDDIYESVPYNLLDDEDPWIRTTDFTPSNAVGRCNSYR 364
           D + +V+  QL S+P ++YRTADDDI + VPY+LLDD+DPWIRTTDFT S A+GRCN++R
Sbjct: 211 DTSCYVILLQLTSSPCIWYRTADDDIAKLVPYDLLDDDDPWIRTTDFTISGAIGRCNTFR 270

Query: 363 ILFSPRFGVKMQRSLAYLRDRRIDDVRPKHRQIIRDEPNYGVLPVDPFFCIQYKEGIKFS 184
           +   PR+G+K+  ++ YL+++R+  V       I +EP+YGV   D FFCI YK+ I F 
Sbjct: 271 VSVPPRYGIKLNNAMNYLKEQRVHQVSLNRPPKILNEPDYGVQMTDHFFCILYKKDISFE 330

Query: 183 TMFLVNALVHKGIVNQHQLTEEFFSLLRQQSDIINESALLDIWSYKRSIFDAPRRLKVVQ 4
            +FLVNA++HKGI+NQHQ+++ FF LLR Q + +N +AL  I +++R + DA ++LK+VQ
Sbjct: 331 ILFLVNAVMHKGIINQHQMSDRFFDLLRNQPNEVNLAALSHIHAFRRPVLDACKKLKLVQ 390

Query: 3   E 1
           E
Sbjct: 391 E 391


>gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
           gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase
           6 [Gossypium hirsutum]
          Length = 1196

 Score =  278 bits (712), Expect = 1e-72
 Identities = 138/243 (56%), Positives = 184/243 (75%), Gaps = 2/243 (0%)
 Frame = -3

Query: 723 WKGPDLVVDFLIDPFDGRCKILFSKDTAFSFKGTRDLALIKCNFKLEFLVRDINEVRVYQ 544
           W+GP   V+FL+DPFD  CK  FS+DTAFSFKGT + A+IKC+FK+EFLVR+INEV+ Y 
Sbjct: 152 WRGPPSGVEFLVDPFDCTCKFCFSRDTAFSFKGTNEHAVIKCDFKVEFLVREINEVKQYS 211

Query: 543 DNAPFVMQFQLISAPSVYYRTADDDIYESVPYNLLDDEDPWIRTTDFTPSNAVGRCNSYR 364
           +   FV+  QL S+P V+YRTADDD  ++VP+ LLDD+D WIRTTDFT S A+GRCN+YR
Sbjct: 212 EPTGFVVLLQLASSPWVWYRTADDDFEKTVPFGLLDDDDQWIRTTDFTASGAIGRCNTYR 271

Query: 363 ILFSPRFGVKMQRSLAYLRDRR--IDDVRPKHRQIIRDEPNYGVLPVDPFFCIQYKEGIK 190
           +L  PR G+K+++++ YLR+RR  ++D+R + R  IRDEP++G    D F+ I YKEGI 
Sbjct: 272 VLVRPRHGLKLKKAMDYLRERRVPVEDLRSQLR--IRDEPDFGRSMSDHFYYI-YKEGIP 328

Query: 189 FSTMFLVNALVHKGIVNQHQLTEEFFSLLRQQSDIINESALLDIWSYKRSIFDAPRRLKV 10
           F  MFLVNA++HKGI NQHQL+ +FF LLR QS  +N +AL  I+SY+  ++DA  RLK 
Sbjct: 329 FEIMFLVNAVLHKGIFNQHQLSMDFFRLLRNQSMEVNVAALKHIYSYRHPVYDAYERLKD 388

Query: 9   VQE 1
           V +
Sbjct: 389 VHD 391


>ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis sativus]
           gi|316989907|gb|ADU77019.1| RNA-dependent RNA polymerase
           6 [Cucumis sativus]
          Length = 1197

 Score =  278 bits (711), Expect = 1e-72
 Identities = 124/241 (51%), Positives = 178/241 (73%)
 Frame = -3

Query: 723 WKGPDLVVDFLIDPFDGRCKILFSKDTAFSFKGTRDLALIKCNFKLEFLVRDINEVRVYQ 544
           W+GP   +DFL+DPFDG CK  F+KDTAFSFK       +KC++K+EF+VRDIN++  Y 
Sbjct: 151 WRGPSSGMDFLVDPFDGTCKFCFTKDTAFSFKDNNKHTFLKCDYKMEFIVRDINQITRYT 210

Query: 543 DNAPFVMQFQLISAPSVYYRTADDDIYESVPYNLLDDEDPWIRTTDFTPSNAVGRCNSYR 364
           D + +V+  QL ++P ++YRTADDDI + VPY+LLDD+DPWIRTTDFT S A+GRCN++R
Sbjct: 211 DTSCYVILLQLTASPCIWYRTADDDIAKLVPYDLLDDDDPWIRTTDFTISGAIGRCNTFR 270

Query: 363 ILFSPRFGVKMQRSLAYLRDRRIDDVRPKHRQIIRDEPNYGVLPVDPFFCIQYKEGIKFS 184
           +   PR+G+K+  ++ YL+++R+  V       I +EP+YGV   D FFCI YK+ I F 
Sbjct: 271 VSVPPRYGIKLNNAMNYLKEQRVHQVSLNRPPKILNEPDYGVQMTDHFFCILYKKDISFE 330

Query: 183 TMFLVNALVHKGIVNQHQLTEEFFSLLRQQSDIINESALLDIWSYKRSIFDAPRRLKVVQ 4
            +FLVNA++HKGI+NQHQ+++ FF LLR Q + +N +AL  I +++R + DA ++LK+VQ
Sbjct: 331 ILFLVNAVMHKGIINQHQMSDRFFDLLRNQPNEVNLAALSHIHAFRRPVLDACKKLKLVQ 390

Query: 3   E 1
           E
Sbjct: 391 E 391


>gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]
          Length = 1194

 Score =  277 bits (709), Expect = 2e-72
 Identities = 132/241 (54%), Positives = 173/241 (71%)
 Frame = -3

Query: 723 WKGPDLVVDFLIDPFDGRCKILFSKDTAFSFKGTRDLALIKCNFKLEFLVRDINEVRVYQ 544
           W+GP   VDFL+DPFDG CK  F++DTAFSFK    LA++KC+FK+EFLVRDINE++ Y 
Sbjct: 148 WRGPSYGVDFLVDPFDGLCKFCFTRDTAFSFKDMAKLAMMKCDFKVEFLVRDINEIKQYT 207

Query: 543 DNAPFVMQFQLISAPSVYYRTADDDIYESVPYNLLDDEDPWIRTTDFTPSNAVGRCNSYR 364
           D +  V+   L S+P V+YRTADDDI  SVP++LLDD+DPWIRTTDFTPS A+GRCNSYR
Sbjct: 208 DTSHLVVLLLLASSPRVWYRTADDDIEVSVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYR 267

Query: 363 ILFSPRFGVKMQRSLAYLRDRRIDDVRPKHRQIIRDEPNYGVLPVDPFFCIQYKEGIKFS 184
           +   PR G K++++++YLR+RR+ +   +    I+ EP++ V   DP F +  K GI F 
Sbjct: 268 VSIPPRHGSKLKKAMSYLRERRVQETPLRKALRIQSEPDFAVPMSDPIFYVHGKHGIPFE 327

Query: 183 TMFLVNALVHKGIVNQHQLTEEFFSLLRQQSDIINESALLDIWSYKRSIFDAPRRLKVVQ 4
            MFL+N +VHKGI NQH +++  F L R Q   IN +AL  I SYKR +FDA  +LK VQ
Sbjct: 328 IMFLLNVIVHKGIFNQHNISDGLFDLFRNQPREINLAALKHISSYKRPVFDAYAKLKNVQ 387

Query: 3   E 1
           E
Sbjct: 388 E 388


>ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X3 [Citrus
           sinensis]
          Length = 1025

 Score =  275 bits (704), Expect = 8e-72
 Identities = 133/241 (55%), Positives = 174/241 (72%)
 Frame = -3

Query: 723 WKGPDLVVDFLIDPFDGRCKILFSKDTAFSFKGTRDLALIKCNFKLEFLVRDINEVRVYQ 544
           W+GP    DFL+DPFDG CK  F++D AF+ K + + A+IKC FK+EFLVR+IN V+ Y 
Sbjct: 152 WRGPASGTDFLVDPFDGTCKFCFTRDIAFALKSSTEHAVIKCEFKVEFLVREINLVKQYS 211

Query: 543 DNAPFVMQFQLISAPSVYYRTADDDIYESVPYNLLDDEDPWIRTTDFTPSNAVGRCNSYR 364
           + +   +  QL S+P V+YRTADDDI   VP+++LDD+DPWIRTTDFTPS A+GRCNSYR
Sbjct: 212 EFSCVAILLQLASSPRVWYRTADDDILVLVPFDMLDDDDPWIRTTDFTPSGAIGRCNSYR 271

Query: 363 ILFSPRFGVKMQRSLAYLRDRRIDDVRPKHRQIIRDEPNYGVLPVDPFFCIQYKEGIKFS 184
           I  S R   K+ + + YL +RR+          IR+EP++ V   DPFFCI Y+EGI F 
Sbjct: 272 ISISSRHRGKLSKVITYLGERRVQVDSLSRPITIREEPDFEVPMSDPFFCIHYEEGISFE 331

Query: 183 TMFLVNALVHKGIVNQHQLTEEFFSLLRQQSDIINESALLDIWSYKRSIFDAPRRLKVVQ 4
            MFLVNA++HKGI+NQHQL++ FF LLR QS  +N +AL  I+SYK  +FDA +RLK+VQ
Sbjct: 332 IMFLVNAVMHKGIINQHQLSDSFFDLLRGQSREVNVAALKHIYSYKWPVFDACKRLKLVQ 391

Query: 3   E 1
           E
Sbjct: 392 E 392


>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
           sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
           sinensis]
          Length = 1197

 Score =  275 bits (704), Expect = 8e-72
 Identities = 133/241 (55%), Positives = 174/241 (72%)
 Frame = -3

Query: 723 WKGPDLVVDFLIDPFDGRCKILFSKDTAFSFKGTRDLALIKCNFKLEFLVRDINEVRVYQ 544
           W+GP    DFL+DPFDG CK  F++D AF+ K + + A+IKC FK+EFLVR+IN V+ Y 
Sbjct: 152 WRGPASGTDFLVDPFDGTCKFCFTRDIAFALKSSTEHAVIKCEFKVEFLVREINLVKQYS 211

Query: 543 DNAPFVMQFQLISAPSVYYRTADDDIYESVPYNLLDDEDPWIRTTDFTPSNAVGRCNSYR 364
           + +   +  QL S+P V+YRTADDDI   VP+++LDD+DPWIRTTDFTPS A+GRCNSYR
Sbjct: 212 EFSCVAILLQLASSPRVWYRTADDDILVLVPFDMLDDDDPWIRTTDFTPSGAIGRCNSYR 271

Query: 363 ILFSPRFGVKMQRSLAYLRDRRIDDVRPKHRQIIRDEPNYGVLPVDPFFCIQYKEGIKFS 184
           I  S R   K+ + + YL +RR+          IR+EP++ V   DPFFCI Y+EGI F 
Sbjct: 272 ISISSRHRGKLSKVITYLGERRVQVDSLSRPITIREEPDFEVPMSDPFFCIHYEEGISFE 331

Query: 183 TMFLVNALVHKGIVNQHQLTEEFFSLLRQQSDIINESALLDIWSYKRSIFDAPRRLKVVQ 4
            MFLVNA++HKGI+NQHQL++ FF LLR QS  +N +AL  I+SYK  +FDA +RLK+VQ
Sbjct: 332 IMFLVNAVMHKGIINQHQLSDSFFDLLRGQSREVNVAALKHIYSYKWPVFDACKRLKLVQ 391

Query: 3   E 1
           E
Sbjct: 392 E 392


>gb|ESW09024.1| hypothetical protein PHAVU_009G093700g [Phaseolus vulgaris]
          Length = 1204

 Score =  275 bits (703), Expect = 1e-71
 Identities = 132/243 (54%), Positives = 176/243 (72%), Gaps = 2/243 (0%)
 Frame = -3

Query: 723 WKGPDLVVDFLIDPFDGRCKILFSKDTAFSFKGTRDLALIKCNFKLEFLVRDINEVRVYQ 544
           WKGPD  V FL+DPFDG C+  F++D AF FKG    A+IKC+F++ FLVRDINE+R Y 
Sbjct: 152 WKGPDKGVKFLVDPFDGMCRFCFTRDIAFPFKGIEKEAVIKCDFQVGFLVRDINEIRRYN 211

Query: 543 DNAPFVMQFQLISAPSVYYRTADDDIYESVPYNLLDDEDPWIRTTDFTPSNAVGRCNSYR 364
           D++  V+   L S+P V+YRTA+DDI + VP++LLDD+DPWIRTTDFTPS A+GRCN Y+
Sbjct: 212 DSSYLVVLLHLASSPWVWYRTAEDDIEDLVPFDLLDDDDPWIRTTDFTPSGAIGRCNFYK 271

Query: 363 ILFSPRFGVKMQRSLAYLRDRRIDDVRPKHRQIIR--DEPNYGVLPVDPFFCIQYKEGIK 190
           I   PR G K+ +++ YL+ +R+       +Q +R  +EP++G    +PFF I Y+ GI 
Sbjct: 272 ISIPPRHGAKLMKAMLYLKGQRVQMQELPLKQTLRALNEPDFGTPMSNPFFYIDYQVGIT 331

Query: 189 FSTMFLVNALVHKGIVNQHQLTEEFFSLLRQQSDIINESALLDIWSYKRSIFDAPRRLKV 10
           F  MFLVNA+VHKGI NQH+L++ FF LLR Q   +N +AL  + SYKR +FDA +RLKV
Sbjct: 332 FDIMFLVNAIVHKGIFNQHRLSDRFFELLRNQPKELNVAALKHLCSYKRPVFDATKRLKV 391

Query: 9   VQE 1
           VQE
Sbjct: 392 VQE 394


>ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca
           subsp. vesca]
          Length = 1197

 Score =  275 bits (703), Expect = 1e-71
 Identities = 131/241 (54%), Positives = 175/241 (72%)
 Frame = -3

Query: 723 WKGPDLVVDFLIDPFDGRCKILFSKDTAFSFKGTRDLALIKCNFKLEFLVRDINEVRVYQ 544
           WKGPD  VDF++DPFDG CK  F +DTAFSFKG    A+I C+FK EF VR+I E + Y 
Sbjct: 152 WKGPDHGVDFVVDPFDGTCKFCFRRDTAFSFKGLNKHAVITCDFKAEFQVREIGEFKHYT 211

Query: 543 DNAPFVMQFQLISAPSVYYRTADDDIYESVPYNLLDDEDPWIRTTDFTPSNAVGRCNSYR 364
           +    V+  +L+S+P V YRTADDDI +SV ++LLDD+DPWIRTTDFTP+ A+GRCN YR
Sbjct: 212 EPLYHVLLLRLVSSPWVSYRTADDDIDQSVLFDLLDDDDPWIRTTDFTPTGAIGRCNYYR 271

Query: 363 ILFSPRFGVKMQRSLAYLRDRRIDDVRPKHRQIIRDEPNYGVLPVDPFFCIQYKEGIKFS 184
           +L  PR G K+++++ YL++RR+ ++  K    I+DEP +G    D  F I Y++ I F 
Sbjct: 272 VLIPPRHGAKLKKAMIYLKERRVQELFIKKPPRIQDEPGFGNPMSDALFSIHYQKNISFD 331

Query: 183 TMFLVNALVHKGIVNQHQLTEEFFSLLRQQSDIINESALLDIWSYKRSIFDAPRRLKVVQ 4
            +FLVNA++HKGI+NQHQL+E FF LLR Q + IN +AL  + SYK  +FDA +RLK+VQ
Sbjct: 332 ILFLVNAVMHKGILNQHQLSESFFDLLRNQPEEINVAALKHLCSYKHPVFDASKRLKLVQ 391

Query: 3   E 1
           E
Sbjct: 392 E 392


>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  275 bits (702), Expect = 1e-71
 Identities = 136/243 (55%), Positives = 180/243 (74%), Gaps = 2/243 (0%)
 Frame = -3

Query: 723 WKGPDLVVDFLIDPFDGRCKILFSKDTAFSFKGTRDLALIKCNFKLEFLVRDINEVRVYQ 544
           W+GP   VDFL+DPF+G CKILF+KDTAFSF+G    A+IKCNFK+EFLVR+INE++  +
Sbjct: 151 WRGPRTGVDFLVDPFNGTCKILFTKDTAFSFRGEARHAIIKCNFKIEFLVREINEIKKCK 210

Query: 543 DNAPFVMQFQLISAPSVYYRTADDDIYESVPYNLLDDEDPWIRTTDFTPSNAVGRCNSYR 364
           D    V+ FQL S+P V+YRTADDDI ESV ++LLDD+D WIRTTD T S A+GRCN+YR
Sbjct: 211 DFTSLVILFQLASSPLVFYRTADDDIEESVAFDLLDDDDQWIRTTDITGSGAIGRCNTYR 270

Query: 363 ILFSPRFGVKMQRSLAYLRDRRIDDVRPKHRQIIR--DEPNYGVLPVDPFFCIQYKEGIK 190
           I   PR G   ++++AY   RR+  V   +R+++R  DEP++GV   DPFFC Q  EGI 
Sbjct: 271 ISIRPRNGPSFEKAMAYFSFRRVPMVEMCNRKMLRVKDEPDFGVSMSDPFFCFQ-NEGIS 329

Query: 189 FSTMFLVNALVHKGIVNQHQLTEEFFSLLRQQSDIINESALLDIWSYKRSIFDAPRRLKV 10
           F  MFLVNA++HKGIVNQHQ+T EFF LLR + + +N +AL  ++SYK  + DA ++L  
Sbjct: 330 FKVMFLVNAVLHKGIVNQHQMTNEFFYLLRSRQEEVNLAALKHMFSYKWPVNDAIQKLVG 389

Query: 9   VQE 1
           +Q+
Sbjct: 390 IQK 392


>ref|XP_002457941.1| hypothetical protein SORBIDRAFT_03g022880 [Sorghum bicolor]
           gi|241929916|gb|EES03061.1| hypothetical protein
           SORBIDRAFT_03g022880 [Sorghum bicolor]
          Length = 1207

 Score =  274 bits (701), Expect = 2e-71
 Identities = 130/247 (52%), Positives = 181/247 (73%), Gaps = 6/247 (2%)
 Frame = -3

Query: 723 WKGPDLVVDFLIDPFDGRCKILFSKDTAFSFKGTRDLALIKCNFKLEFLVRDINEVRVYQ 544
           W+GP   ++F +DPFDG C+++F++DTAF  +  R+  +++C+ KLEF VRD+ EVRV++
Sbjct: 161 WRGPASGLEFSVDPFDGSCRLIFARDTAFKVREFRESVVMRCDVKLEFPVRDVAEVRVFR 220

Query: 543 DNAPFVMQFQLISAPSVYYRTADDDIYESVPYNLLDDEDPWIRTTDFTPSNAVGRCNSYR 364
            +   +++  L +AP VYYRTADDDI+ESVP++LLDD+DPWIRTTD TPS A+GRC +YR
Sbjct: 221 LDCSLLIR--LSAAPLVYYRTADDDIHESVPFDLLDDDDPWIRTTDITPSGAIGRCGAYR 278

Query: 363 ILFSPRFGVKMQRSLAYLRDRRIDDV------RPKHRQIIRDEPNYGVLPVDPFFCIQYK 202
           I FSPRF  KM+R+LAY+RDRR+  V        +    +RDEP +G    D FFC+Q+ 
Sbjct: 279 ITFSPRFWPKMERALAYMRDRRVPIVDCGGGWGARRGLTVRDEPEFGERMQDLFFCVQHS 338

Query: 201 EGIKFSTMFLVNALVHKGIVNQHQLTEEFFSLLRQQSDIINESALLDIWSYKRSIFDAPR 22
           EG+KF  +FLVNALVHKG++NQH LT EFF LL+++ D +N +AL + W  K  +FDA  
Sbjct: 339 EGLKFPVLFLVNALVHKGVINQHHLTPEFFGLLQRKEDDVNVAALREFWGDKFPVFDACG 398

Query: 21  RLKVVQE 1
           RLK +Q+
Sbjct: 399 RLKNLQD 405


>gb|AGU69384.1| RNA-dependendent RNA polymerase 6-like protein [Lotus japonicus]
          Length = 1201

 Score =  273 bits (697), Expect = 5e-71
 Identities = 132/241 (54%), Positives = 173/241 (71%)
 Frame = -3

Query: 723 WKGPDLVVDFLIDPFDGRCKILFSKDTAFSFKGTRDLALIKCNFKLEFLVRDINEVRVYQ 544
           W+GP+  V+ L+DPFD  C++ FS+DTAFS K     A+IKC+FK+EF+VRDI EVR Y 
Sbjct: 152 WRGPEKGVNLLVDPFDRMCRLRFSRDTAFSIKQNEKKAVIKCDFKVEFMVRDIYEVRRYD 211

Query: 543 DNAPFVMQFQLISAPSVYYRTADDDIYESVPYNLLDDEDPWIRTTDFTPSNAVGRCNSYR 364
           D +  V+   L S+P V+YRTADDDI ESV ++LLDD+DPWIRTTDFTPS A+GRCN YR
Sbjct: 212 DTSYRVVLLHLASSPLVWYRTADDDIEESVSFDLLDDDDPWIRTTDFTPSGAIGRCNFYR 271

Query: 363 ILFSPRFGVKMQRSLAYLRDRRIDDVRPKHRQIIRDEPNYGVLPVDPFFCIQYKEGIKFS 184
           I   PR G K+ +++AYL  +R+ +   K    I+DEPN+GV   D FF I  +EGI F 
Sbjct: 272 ISIPPRHGAKLMKAMAYLNFQRVQEFPLKRPLRIQDEPNFGVPMSDDFFYIHCQEGITFD 331

Query: 183 TMFLVNALVHKGIVNQHQLTEEFFSLLRQQSDIINESALLDIWSYKRSIFDAPRRLKVVQ 4
            MFLVNA++HKGI+N + L++ FF +LR Q   +N +AL  + SYKR +FDA +RLK VQ
Sbjct: 332 IMFLVNAVIHKGILNPYSLSDRFFEVLRNQPQEVNVAALKHLCSYKRPVFDAAKRLKTVQ 391

Query: 3   E 1
           E
Sbjct: 392 E 392


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  272 bits (696), Expect = 7e-71
 Identities = 134/243 (55%), Positives = 178/243 (73%), Gaps = 2/243 (0%)
 Frame = -3

Query: 723 WKGPDLVVDFLIDPFDGRCKILFSKDTAFSFKGTRDLALIKCNFKLEFLVRDINEVRVYQ 544
           W+GP   VDFL+DPF+G CKILF+KDTAFSF+G    A+IKCNFK+EFLVR+INE++  +
Sbjct: 151 WRGPRTGVDFLVDPFNGTCKILFTKDTAFSFRGEARHAIIKCNFKIEFLVREINEIKKCK 210

Query: 543 DNAPFVMQFQLISAPSVYYRTADDDIYESVPYNLLDDEDPWIRTTDFTPSNAVGRCNSYR 364
           D    V+ FQL S+P V+YRTADDDI ESV ++LLDD+D WIRTTD T S A+GRCN+YR
Sbjct: 211 DFTSLVILFQLASSPLVFYRTADDDIEESVAFDLLDDDDQWIRTTDITGSGAIGRCNTYR 270

Query: 363 ILFSPRFGVKMQRSLAYLRDRRIDDVRPKHRQIIR--DEPNYGVLPVDPFFCIQYKEGIK 190
           I   PR G   ++++AY   RR+  V   +R+++R  DEP++GV   DPFFC Q  EGI 
Sbjct: 271 ISIRPRNGPSFEKAMAYFSFRRVPMVEMCNRKMLRVKDEPDFGVSMSDPFFCFQ-NEGIS 329

Query: 189 FSTMFLVNALVHKGIVNQHQLTEEFFSLLRQQSDIINESALLDIWSYKRSIFDAPRRLKV 10
           F  +FLVNA++HKGIVNQHQ+  EFF LLR   + +N +AL  ++SYK  + DA ++L  
Sbjct: 330 FRVLFLVNAVLHKGIVNQHQMANEFFYLLRSHQEEVNSAALKHMFSYKWPVNDAIQKLAG 389

Query: 9   VQE 1
           +Q+
Sbjct: 390 IQK 392