BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00009662
         (982 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004976290.1| PREDICTED: ATP-dependent Clp protease proteo...   332   2e-88
ref|XP_003581445.1| PREDICTED: ATP-dependent Clp protease proteo...   326   1e-86
ref|NP_001053358.1| Os04g0525600 [Oryza sativa Japonica Group] g...   323   5e-86
dbj|BAK00210.1| predicted protein [Hordeum vulgare subsp. vulgare]    322   1e-85
gb|ABK26796.1| unknown [Picea sitchensis]                             322   2e-85
ref|NP_001147355.1| ATP-dependent Clp protease proteolytic subun...   321   2e-85
gb|ACN34096.1| unknown [Zea mays] gi|414586294|tpg|DAA36865.1| T...   320   4e-85
emb|CAE05641.2| OSJNBa0038O10.7 [Oryza sativa Japonica Group] gi...   320   7e-85
ref|NP_001150578.1| LOC100284211 [Zea mays] gi|195640324|gb|ACG3...   319   9e-85
gb|ABK23566.1| unknown [Picea sitchensis]                             312   1e-82
gb|EAZ31393.1| hypothetical protein OsJ_15521 [Oryza sativa Japo...   307   4e-81
gb|AFW63098.1| ATP-dependent Clp protease proteolytic subunit [Z...   301   2e-79
ref|NP_001141255.1| uncharacterized protein LOC100273342 [Zea ma...   301   2e-79
ref|XP_002990473.1| hypothetical protein SELMODRAFT_131898 [Sela...   301   3e-79
ref|XP_004953199.1| PREDICTED: ATP-dependent Clp protease proteo...   298   2e-78
ref|XP_002452493.1| hypothetical protein SORBIDRAFT_04g026880 [S...   298   2e-78
gb|ACG42001.1| ATP-dependent Clp protease proteolytic subunit [Z...   296   6e-78
ref|NP_001150643.1| ATP-dependent Clp protease proteolytic subun...   296   6e-78
ref|XP_002983780.1| hypothetical protein SELMODRAFT_48156 [Selag...   296   1e-77
dbj|BAJ90210.1| predicted protein [Hordeum vulgare subsp. vulgare]    295   1e-77

>ref|XP_004976290.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
           mitochondrial-like [Setaria italica]
          Length = 298

 Score =  332 bits (850), Expect = 2e-88
 Identities = 179/266 (67%), Positives = 203/266 (76%), Gaps = 10/266 (3%)
 Frame = -2

Query: 975 PIRINPNLNCAMLWRRLA------LSGSIIPSARRAGAGC----RSYGLIPMVIEHTSRG 826
           P  +NP+   AML RRLA       S S  P A  A A      R YGL+PMVIEHTSRG
Sbjct: 28  PNPLNPSAAAAML-RRLAAVAPRAFSSSSSPHAPPAAASGYTPRREYGLVPMVIEHTSRG 86

Query: 825 ERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAKPIHLYINSPGGAVTAG 646
           ERAYDIFSRLLKERIVCI+GPISDDTAS+VVAQLLFLESENPAKP+HLYINSPGG VTAG
Sbjct: 87  ERAYDIFSRLLKERIVCIHGPISDDTASLVVAQLLFLESENPAKPVHLYINSPGGVVTAG 146

Query: 645 LAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXGERRALPYSRVMIHQPSGGASGQAT 466
           LAIYDTMQYIRSPV+TLC                 GERRALP +RVMIHQPSGGASGQA+
Sbjct: 147 LAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGARGERRALPNARVMIHQPSGGASGQAS 206

Query: 465 EIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPDEAKEFGLVDEVITHRP 286
           +IAIHAKEILKVR+RLN+IY +HTGQ I+RIE CMERDMFM P+EA ++GL+DEVI HRP
Sbjct: 207 DIAIHAKEILKVRDRLNKIYAKHTGQAIDRIEQCMERDMFMDPEEAHDWGLIDEVIEHRP 266

Query: 285 LALVTDAVPDQEASNEGTKNGNDDGS 208
           ++LV+DAV     +  G  NG + G+
Sbjct: 267 VSLVSDAVGGDPPNLGGGGNGENKGA 292


>ref|XP_003581445.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
           mitochondrial-like [Brachypodium distachyon]
          Length = 300

 Score =  326 bits (835), Expect = 1e-86
 Identities = 175/256 (68%), Positives = 197/256 (76%), Gaps = 4/256 (1%)
 Frame = -2

Query: 963 NPNLNCAMLWRRLALSGS---IIPSARRAG-AGCRSYGLIPMVIEHTSRGERAYDIFSRL 796
           NP+   AML RRLA + +      S+  AG    R YGL+PMVIEHTSRGERAYDIFSRL
Sbjct: 40  NPSAAAAML-RRLASAAAPRAFFSSSPPAGYTARREYGLVPMVIEHTSRGERAYDIFSRL 98

Query: 795 LKERIVCINGPISDDTASVVVAQLLFLESENPAKPIHLYINSPGGAVTAGLAIYDTMQYI 616
           LKERIVCI+GPI+DDTAS+VVAQLLFLESENPAKPIHLYINSPGG VTAGLAIYDTMQYI
Sbjct: 99  LKERIVCIHGPIADDTASLVVAQLLFLESENPAKPIHLYINSPGGVVTAGLAIYDTMQYI 158

Query: 615 RSPVSTLCXXXXXXXXXXXXXXXXXGERRALPYSRVMIHQPSGGASGQATEIAIHAKEIL 436
           RSPV+TLC                 GERRALP +RVMIHQPSGGASGQA++IAIHAKEIL
Sbjct: 159 RSPVTTLCIGQAASMGSLLLAAGAPGERRALPNARVMIHQPSGGASGQASDIAIHAKEIL 218

Query: 435 KVRERLNEIYVRHTGQPIERIEHCMERDMFMSPDEAKEFGLVDEVITHRPLALVTDAVPD 256
           KVR+RLN+IY +HTGQ IE IE CMERDMFM P EA  +GL+DEVI HRP++LV+DAV  
Sbjct: 219 KVRDRLNKIYAKHTGQAIESIEKCMERDMFMDPVEAHSWGLIDEVIEHRPVSLVSDAVAS 278

Query: 255 QEASNEGTKNGNDDGS 208
              S  G   G + G+
Sbjct: 279 DPPSTGGAGGGENKGT 294


>ref|NP_001053358.1| Os04g0525600 [Oryza sativa Japonica Group]
           gi|113564929|dbj|BAF15272.1| Os04g0525600 [Oryza sativa
           Japonica Group] gi|215768496|dbj|BAH00725.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 309

 Score =  323 bits (829), Expect = 5e-86
 Identities = 173/264 (65%), Positives = 199/264 (75%), Gaps = 13/264 (4%)
 Frame = -2

Query: 960 PNLNCAMLWRRLALSG------SIIPSARRAGAGC---RSYGLIPMVIEHTSRGERAYDI 808
           PN + A + RRLA +       S  P A    AG    R YGL+PMVIEHTSRGERAYDI
Sbjct: 44  PNPSPAAMLRRLAAAAPRAFFSSSTPHAPPPPAGYTQRREYGLVPMVIEHTSRGERAYDI 103

Query: 807 FSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAKPIHLYINSPGGAVTAGLAIYDT 628
           FSRLLKERIVCI+GPI+DDTAS+VVAQLLFLESENPAKP+HLYINSPGG VTAGLAIYDT
Sbjct: 104 FSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVHLYINSPGGVVTAGLAIYDT 163

Query: 627 MQYIRSPVSTLCXXXXXXXXXXXXXXXXXGERRALPYSRVMIHQPSGGASGQATEIAIHA 448
           MQYIRSPV+TLC                 GERRALP +RVMIHQPSGGASGQA++IAIHA
Sbjct: 164 MQYIRSPVTTLCIGQAASMASLLLAAGARGERRALPNARVMIHQPSGGASGQASDIAIHA 223

Query: 447 KEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPDEAKEFGLVDEVITHRPLALVTD 268
           KEILKVR+RLN+IY +HT Q I+RIE CMERDMFM P+EA ++GL+DEVI HRP++LV+D
Sbjct: 224 KEILKVRDRLNKIYAKHTSQAIDRIEQCMERDMFMDPEEAHDWGLIDEVIEHRPVSLVSD 283

Query: 267 AV----PDQEASNEGTKNGNDDGS 208
           AV    P+     +G     D+ S
Sbjct: 284 AVGSDLPNLGGGGDGANKATDEPS 307


>dbj|BAK00210.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 256

 Score =  322 bits (825), Expect = 1e-85
 Identities = 169/250 (67%), Positives = 192/250 (76%), Gaps = 4/250 (1%)
 Frame = -2

Query: 933 RRLALSGS----IIPSARRAGAGCRSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCING 766
           RRLA + +      PS     A  R YGL+PMVIEHTSRGERAYDIFSRLLKERIVCI+G
Sbjct: 3   RRLASAAAPRAFFSPSPAAGHAPRREYGLVPMVIEHTSRGERAYDIFSRLLKERIVCIHG 62

Query: 765 PISDDTASVVVAQLLFLESENPAKPIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXX 586
           PI+DDTAS+VVAQLLFLESENPAKPIHLYINSPGG VTAGLAIYDTMQYIRSPV+TLC  
Sbjct: 63  PIADDTASLVVAQLLFLESENPAKPIHLYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIG 122

Query: 585 XXXXXXXXXXXXXXXGERRALPYSRVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIY 406
                          GERRALP +RVMIHQPSGGASGQA++IAI AKEILKVR+RLN+IY
Sbjct: 123 QAASMGSLLLAAGAPGERRALPNARVMIHQPSGGASGQASDIAIQAKEILKVRDRLNKIY 182

Query: 405 VRHTGQPIERIEHCMERDMFMSPDEAKEFGLVDEVITHRPLALVTDAVPDQEASNEGTKN 226
            +HTGQ I+RIE CMERDMFM P EA  +GL+DEVI HRP++LV+DAV     +  G  +
Sbjct: 183 AKHTGQAIDRIEQCMERDMFMDPVEAHAWGLIDEVIEHRPISLVSDAVSSDPPNVSGGGS 242

Query: 225 GNDDGSGGKE 196
           G  +  G +E
Sbjct: 243 GGGESKGTEE 252


>gb|ABK26796.1| unknown [Picea sitchensis]
          Length = 248

 Score =  322 bits (824), Expect = 2e-85
 Identities = 161/212 (75%), Positives = 181/212 (85%)
 Frame = -2

Query: 873 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAK 694
           RSYGLIPMVIEHTSRGERAYDIFSRLLKERI+CINGPI+D+TASVVVAQLLFLESENP K
Sbjct: 33  RSYGLIPMVIEHTSRGERAYDIFSRLLKERIICINGPIADETASVVVAQLLFLESENPQK 92

Query: 693 PIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXGERRALPYS 514
           PI++YINSPGG VTAGLAIYDTMQYI+SPV+TLC                 GERRALP +
Sbjct: 93  PINMYINSPGGVVTAGLAIYDTMQYIKSPVTTLCIGQAASMGSLLLAAGSHGERRALPNA 152

Query: 513 RVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPD 334
           RVMIHQPSGGASGQA++IAIHAKEILK RERLN +Y +HTGQ IE+IE  MERD FMSPD
Sbjct: 153 RVMIHQPSGGASGQASDIAIHAKEILKTRERLNGLYAKHTGQTIEKIEQFMERDTFMSPD 212

Query: 333 EAKEFGLVDEVITHRPLALVTDAVPDQEASNE 238
           EAKEFGL+DEVI HRP++LVTD+V D + +N+
Sbjct: 213 EAKEFGLIDEVIEHRPISLVTDSVTDDKKNNK 244


>ref|NP_001147355.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
           gi|194700894|gb|ACF84531.1| unknown [Zea mays]
           gi|195610476|gb|ACG27068.1| ATP-dependent Clp protease
           proteolytic subunit [Zea mays]
           gi|413918966|gb|AFW58898.1| ATP-dependent Clp protease
           proteolytic subunit isoform 1 [Zea mays]
           gi|413918967|gb|AFW58899.1| ATP-dependent Clp protease
           proteolytic subunit isoform 2 [Zea mays]
          Length = 260

 Score =  321 bits (823), Expect = 2e-85
 Identities = 163/226 (72%), Positives = 184/226 (81%), Gaps = 4/226 (1%)
 Frame = -2

Query: 873 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAK 694
           R YGL+PMVIEHTSRGERAYDIFSRLLKERIVCI+GPI+DDTAS+VVAQLLFLESENPAK
Sbjct: 33  REYGLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAK 92

Query: 693 PIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXGERRALPYS 514
           P+HLYINSPGG VTAGLAIYDTMQYIRSPV+TLC                 GERRALP +
Sbjct: 93  PVHLYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGASGERRALPNA 152

Query: 513 RVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPD 334
           RVMIHQPSGGASGQA++IAIHAKEILKVR+RLN+IY +HTGQ I+RIE CMERDMFM P+
Sbjct: 153 RVMIHQPSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTGQAIDRIEQCMERDMFMDPE 212

Query: 333 EAKEFGLVDEVITHRPLALVTDAV----PDQEASNEGTKNGNDDGS 208
           EA E+GL+DEVI HRP++LV+DAV    P+          G D+ S
Sbjct: 213 EAHEWGLIDEVIEHRPVSLVSDAVGSDPPNLGGGGTEVNKGTDEPS 258


>gb|ACN34096.1| unknown [Zea mays] gi|414586294|tpg|DAA36865.1| TPA: ATP-dependent
           Clp protease proteolytic subunit [Zea mays]
          Length = 259

 Score =  320 bits (821), Expect = 4e-85
 Identities = 161/222 (72%), Positives = 184/222 (82%)
 Frame = -2

Query: 873 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAK 694
           R YGL+PMVIEHTSRGERAYDIFSRLLKERIVCI+GPI+DDTAS+VVAQLLFLESENPAK
Sbjct: 32  REYGLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAK 91

Query: 693 PIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXGERRALPYS 514
           P+HLYINSPGG VTAGLAIYDTMQYIRSPV+TLC                 GERRALP +
Sbjct: 92  PVHLYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGASGERRALPNA 151

Query: 513 RVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPD 334
           RVMIHQPSGGASGQA++IAIHAKEILKVR+RLN+IY +HTGQ I+RIE CMERDMFM P+
Sbjct: 152 RVMIHQPSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTGQAIDRIEQCMERDMFMDPE 211

Query: 333 EAKEFGLVDEVITHRPLALVTDAVPDQEASNEGTKNGNDDGS 208
           EA ++GL+DEVI HRP++LV+DAV     +  G   G + G+
Sbjct: 212 EAHDWGLIDEVIEHRPVSLVSDAVGSDSQNLGGGGAGVNKGA 253


>emb|CAE05641.2| OSJNBa0038O10.7 [Oryza sativa Japonica Group]
           gi|116310954|emb|CAH67891.1|
           OSIGBa0153E02-OSIGBa0093I20.20 [Oryza sativa Indica
           Group] gi|125549084|gb|EAY94906.1| hypothetical protein
           OsI_16707 [Oryza sativa Indica Group]
          Length = 259

 Score =  320 bits (819), Expect = 7e-85
 Identities = 161/226 (71%), Positives = 184/226 (81%), Gaps = 4/226 (1%)
 Frame = -2

Query: 873 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAK 694
           R YGL+PMVIEHTSRGERAYDIFSRLLKERIVCI+GPI+DDTAS+VVAQLLFLESENPAK
Sbjct: 32  REYGLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAK 91

Query: 693 PIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXGERRALPYS 514
           P+HLYINSPGG VTAGLAIYDTMQYIRSPV+TLC                 GERRALP +
Sbjct: 92  PVHLYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGARGERRALPNA 151

Query: 513 RVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPD 334
           RVMIHQPSGGASGQA++IAIHAKEILKVR+RLN+IY +HT Q I+RIE CMERDMFM P+
Sbjct: 152 RVMIHQPSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTSQAIDRIEQCMERDMFMDPE 211

Query: 333 EAKEFGLVDEVITHRPLALVTDAV----PDQEASNEGTKNGNDDGS 208
           EA ++GL+DEVI HRP++LV+DAV    P+     +G     D+ S
Sbjct: 212 EAHDWGLIDEVIEHRPVSLVSDAVGSDLPNLGGGGDGANKATDEPS 257


>ref|NP_001150578.1| LOC100284211 [Zea mays] gi|195640324|gb|ACG39630.1| ATP-dependent
           Clp protease proteolytic subunit [Zea mays]
          Length = 260

 Score =  319 bits (818), Expect = 9e-85
 Identities = 160/222 (72%), Positives = 184/222 (82%)
 Frame = -2

Query: 873 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAK 694
           R YGL+PMVIEHTSRGERAYDIFSRLLKERIVCI+GPI+DDTAS+VVAQLLFLESENPAK
Sbjct: 33  REYGLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAK 92

Query: 693 PIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXGERRALPYS 514
           P+HLYINSPGG VTAGLAIYDTMQYIRSPV+TLC                 G+RRALP +
Sbjct: 93  PVHLYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGASGQRRALPNA 152

Query: 513 RVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPD 334
           RVMIHQPSGGASGQA++IAIHAKEILKVR+RLN+IY +HTGQ I+RIE CMERDMFM P+
Sbjct: 153 RVMIHQPSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTGQAIDRIEQCMERDMFMDPE 212

Query: 333 EAKEFGLVDEVITHRPLALVTDAVPDQEASNEGTKNGNDDGS 208
           EA ++GL+DEVI HRP++LV+DAV     +  G   G + G+
Sbjct: 213 EAHDWGLIDEVIEHRPVSLVSDAVGSDSQNLGGGGAGVNKGA 254


>gb|ABK23566.1| unknown [Picea sitchensis]
          Length = 243

 Score =  312 bits (800), Expect = 1e-82
 Identities = 159/212 (75%), Positives = 175/212 (82%)
 Frame = -2

Query: 873 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAK 694
           RSYGLIPMVIE TSRGERAYDIFSRLLKERI+CING I DDTA+VVVAQLLFLESENPAK
Sbjct: 29  RSYGLIPMVIEQTSRGERAYDIFSRLLKERIICINGVIEDDTAAVVVAQLLFLESENPAK 88

Query: 693 PIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXGERRALPYS 514
           PI+LYINSPGG VTAGLAIYDTMQYIRSPVST C                 GERR+LP +
Sbjct: 89  PINLYINSPGGVVTAGLAIYDTMQYIRSPVSTFCMGQAASMGSLLLAAGAKGERRSLPNA 148

Query: 513 RVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPD 334
           R+MIHQPSGGASGQA++IAI AKEIL  R+RLN +Y +HTGQ I++IE CMERDMFMSP+
Sbjct: 149 RIMIHQPSGGASGQASDIAIQAKEILLTRDRLNSLYAKHTGQSIDKIEKCMERDMFMSPE 208

Query: 333 EAKEFGLVDEVITHRPLALVTDAVPDQEASNE 238
           EAKEFGLVD VI  RP++LVTDAV D  A NE
Sbjct: 209 EAKEFGLVDTVIEQRPMSLVTDAVGDASADNE 240


>gb|EAZ31393.1| hypothetical protein OsJ_15521 [Oryza sativa Japonica Group]
          Length = 221

 Score =  307 bits (787), Expect = 4e-81
 Identities = 156/219 (71%), Positives = 178/219 (81%), Gaps = 4/219 (1%)
 Frame = -2

Query: 852 MVIEHTSRGERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAKPIHLYIN 673
           MVIEHTSRGERAYDIFSRLLKERIVCI+GPI+DDTAS+VVAQLLFLESENPAKP+HLYIN
Sbjct: 1   MVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVHLYIN 60

Query: 672 SPGGAVTAGLAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXGERRALPYSRVMIHQP 493
           SPGG VTAGLAIYDTMQYIRSPV+TLC                 GERRALP +RVMIHQP
Sbjct: 61  SPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGARGERRALPNARVMIHQP 120

Query: 492 SGGASGQATEIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPDEAKEFGL 313
           SGGASGQA++IAIHAKEILKVR+RLN+IY +HT Q I+RIE CMERDMFM P+EA ++GL
Sbjct: 121 SGGASGQASDIAIHAKEILKVRDRLNKIYAKHTSQAIDRIEQCMERDMFMDPEEAHDWGL 180

Query: 312 VDEVITHRPLALVTDAV----PDQEASNEGTKNGNDDGS 208
           +DEVI HRP++LV+DAV    P+     +G     D+ S
Sbjct: 181 IDEVIEHRPVSLVSDAVGSDLPNLGGGGDGANKATDEPS 219


>gb|AFW63098.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
          Length = 395

 Score =  301 bits (772), Expect = 2e-79
 Identities = 149/204 (73%), Positives = 171/204 (83%)
 Frame = -2

Query: 873 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAK 694
           R YGL+PMVIE TSRGERAYDIFSRLLKERIVCINGPI+DDTAS+VVAQLLFLESENP K
Sbjct: 164 REYGLVPMVIETTSRGERAYDIFSRLLKERIVCINGPIADDTASLVVAQLLFLESENPLK 223

Query: 693 PIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXGERRALPYS 514
           P+HLYINSPGG VTAGLAIYDTMQYIR PV+TLC                 GERRALP +
Sbjct: 224 PVHLYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGAPGERRALPNA 283

Query: 513 RVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPD 334
           RVMIHQPSGGA GQAT+IAI AKEILK+R+RLN+IY +HT QPI++IE CMERD+FM PD
Sbjct: 284 RVMIHQPSGGAQGQATDIAIQAKEILKLRDRLNKIYQKHTRQPIDKIEQCMERDLFMDPD 343

Query: 333 EAKEFGLVDEVITHRPLALVTDAV 262
           EA+++GL+DEVI +RP +L+ D +
Sbjct: 344 EARDWGLIDEVIENRPASLMPDGI 367


>ref|NP_001141255.1| uncharacterized protein LOC100273342 [Zea mays]
           gi|194703568|gb|ACF85868.1| unknown [Zea mays]
          Length = 304

 Score =  301 bits (772), Expect = 2e-79
 Identities = 149/204 (73%), Positives = 171/204 (83%)
 Frame = -2

Query: 873 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAK 694
           R YGL+PMVIE TSRGERAYDIFSRLLKERIVCINGPI+DDTAS+VVAQLLFLESENP K
Sbjct: 73  REYGLVPMVIETTSRGERAYDIFSRLLKERIVCINGPIADDTASLVVAQLLFLESENPLK 132

Query: 693 PIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXGERRALPYS 514
           P+HLYINSPGG VTAGLAIYDTMQYIR PV+TLC                 GERRALP +
Sbjct: 133 PVHLYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGAPGERRALPNA 192

Query: 513 RVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPD 334
           RVMIHQPSGGA GQAT+IAI AKEILK+R+RLN+IY +HT QPI++IE CMERD+FM PD
Sbjct: 193 RVMIHQPSGGAQGQATDIAIQAKEILKLRDRLNKIYQKHTRQPIDKIEQCMERDLFMDPD 252

Query: 333 EAKEFGLVDEVITHRPLALVTDAV 262
           EA+++GL+DEVI +RP +L+ D +
Sbjct: 253 EARDWGLIDEVIENRPASLMPDGI 276


>ref|XP_002990473.1| hypothetical protein SELMODRAFT_131898 [Selaginella moellendorffii]
           gi|300141641|gb|EFJ08350.1| hypothetical protein
           SELMODRAFT_131898 [Selaginella moellendorffii]
          Length = 253

 Score =  301 bits (770), Expect = 3e-79
 Identities = 159/242 (65%), Positives = 185/242 (76%), Gaps = 3/242 (1%)
 Frame = -2

Query: 939 LWR---RLALSGSIIPSARRAGAGCRSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCIN 769
           LWR   R ALS   +   +R     R YGLIPMVIEHT+RGERAYDIFSRLLKERIVCI+
Sbjct: 5   LWRHAARCALSPPALDHHQR-----RLYGLIPMVIEHTARGERAYDIFSRLLKERIVCIH 59

Query: 768 GPISDDTASVVVAQLLFLESENPAKPIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCX 589
           GPI+DDTAS+VVAQLL+LESENP KPIHLYINSPGG VTAGLAIYDTMQYIRSPVSTLC 
Sbjct: 60  GPIADDTASLVVAQLLYLESENPLKPIHLYINSPGGVVTAGLAIYDTMQYIRSPVSTLCV 119

Query: 588 XXXXXXXXXXXXXXXXGERRALPYSRVMIHQPSGGASGQATEIAIHAKEILKVRERLNEI 409
                           G+RR+LP +RVM+HQPSGGASGQA++IAI A+EIL +R RLN++
Sbjct: 120 GQAASMGSLLLAAGEPGQRRSLPNARVMVHQPSGGASGQASDIAIQAREILDMRSRLNKL 179

Query: 408 YVRHTGQPIERIEHCMERDMFMSPDEAKEFGLVDEVITHRPLALVTDAVPDQEASNEGTK 229
           Y +HTG  IE+I+  MERD FMSP+EAKEFGL+DEVI  RP +LV D+V  + A+  G  
Sbjct: 180 YAKHTGSSIEKIDQSMERDHFMSPEEAKEFGLIDEVIVQRPESLVADSVGVKAAAEGGGA 239

Query: 228 NG 223
            G
Sbjct: 240 GG 241


>ref|XP_004953199.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
           mitochondrial-like [Setaria italica]
          Length = 304

 Score =  298 bits (763), Expect = 2e-78
 Identities = 147/204 (72%), Positives = 172/204 (84%)
 Frame = -2

Query: 873 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAK 694
           R YGL+PMVIE TSRGERAYDIFSRLLKERIVCI+GPI+DDTAS+VVAQLLFLESENP K
Sbjct: 73  REYGLVPMVIETTSRGERAYDIFSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPLK 132

Query: 693 PIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXGERRALPYS 514
           P+HLYINSPGG VTAGLAIYDTMQYIR PV+TLC                 GERRALP +
Sbjct: 133 PVHLYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGAPGERRALPNA 192

Query: 513 RVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPD 334
           RVMIHQPSGGA GQAT+IAI AKEILK+R+RLN+IY +HT QPI++IE CMERD+FM P+
Sbjct: 193 RVMIHQPSGGAQGQATDIAIQAKEILKMRDRLNKIYQKHTRQPIDKIEQCMERDLFMDPE 252

Query: 333 EAKEFGLVDEVITHRPLALVTDAV 262
           EA+++GL+DEVI +RP +L+T+ +
Sbjct: 253 EARDWGLIDEVIENRPASLMTEGL 276


>ref|XP_002452493.1| hypothetical protein SORBIDRAFT_04g026880 [Sorghum bicolor]
           gi|241932324|gb|EES05469.1| hypothetical protein
           SORBIDRAFT_04g026880 [Sorghum bicolor]
          Length = 309

 Score =  298 bits (763), Expect = 2e-78
 Identities = 147/204 (72%), Positives = 171/204 (83%)
 Frame = -2

Query: 873 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAK 694
           R YGL+PMVIE TSRGERAYDIFSRLLKERIVCI+GPI+DDTAS+VVAQLLFLESENP K
Sbjct: 80  REYGLVPMVIETTSRGERAYDIFSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPLK 139

Query: 693 PIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXGERRALPYS 514
           P+HLYINSPGG VTAGLAIYDTMQYIR PV+TLC                 GERRALP +
Sbjct: 140 PVHLYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGAPGERRALPNA 199

Query: 513 RVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPD 334
           RVMIHQPSGGA GQAT+IAI AKEILK+R+RLN+IY +HT QPI++IE CMERD+FM P+
Sbjct: 200 RVMIHQPSGGAQGQATDIAIQAKEILKMRDRLNKIYQKHTRQPIDKIEQCMERDLFMDPE 259

Query: 333 EAKEFGLVDEVITHRPLALVTDAV 262
           EA+++GL+DEVI +RP +L+ D +
Sbjct: 260 EARDWGLIDEVIENRPASLMPDGI 283


>gb|ACG42001.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
          Length = 302

 Score =  296 bits (759), Expect = 6e-78
 Identities = 146/204 (71%), Positives = 170/204 (83%)
 Frame = -2

Query: 873 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAK 694
           R YGL+PMVIE TSRGERAYDIFSRLLKERIVCI+GPI+DDTAS+VVAQLLFLESENP K
Sbjct: 73  REYGLVPMVIETTSRGERAYDIFSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPLK 132

Query: 693 PIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXGERRALPYS 514
           P+HLYINSPGG VTAGLAIYDTMQYIR PV+TLC                 GERRALP +
Sbjct: 133 PVHLYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGAPGERRALPNA 192

Query: 513 RVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPD 334
           RVMIHQPSGGA GQAT+IAI AKEILK+R+RLN+IY +HT QPI++IE CMERD+FM P+
Sbjct: 193 RVMIHQPSGGAQGQATDIAIQAKEILKMRDRLNKIYQKHTRQPIDKIEQCMERDLFMDPE 252

Query: 333 EAKEFGLVDEVITHRPLALVTDAV 262
           EA+++GL+DEVI +RP + + D +
Sbjct: 253 EARDWGLIDEVIENRPASFMPDVI 276


>ref|NP_001150643.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
           gi|195640820|gb|ACG39878.1| ATP-dependent Clp protease
           proteolytic subunit [Zea mays]
           gi|413937908|gb|AFW72459.1| ATP-dependent Clp protease
           proteolytic subunit [Zea mays]
          Length = 302

 Score =  296 bits (759), Expect = 6e-78
 Identities = 146/204 (71%), Positives = 170/204 (83%)
 Frame = -2

Query: 873 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAK 694
           R YGL+PMVIE TSRGERAYDIFSRLLKERIVCI+GPI+DDTAS+VVAQLLFLESENP K
Sbjct: 73  REYGLVPMVIETTSRGERAYDIFSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPLK 132

Query: 693 PIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXGERRALPYS 514
           P+HLYINSPGG VTAGLAIYDTMQYIR PV+TLC                 GERRALP +
Sbjct: 133 PVHLYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGAPGERRALPNA 192

Query: 513 RVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPD 334
           RVMIHQPSGGA GQAT+IAI AKEILK+R+RLN+IY +HT QPI++IE CMERD+FM P+
Sbjct: 193 RVMIHQPSGGAQGQATDIAIQAKEILKMRDRLNKIYQKHTRQPIDKIEQCMERDLFMDPE 252

Query: 333 EAKEFGLVDEVITHRPLALVTDAV 262
           EA+++GL+DEVI +RP + + D +
Sbjct: 253 EARDWGLIDEVIENRPASFMPDGI 276


>ref|XP_002983780.1| hypothetical protein SELMODRAFT_48156 [Selaginella moellendorffii]
           gi|300148617|gb|EFJ15276.1| hypothetical protein
           SELMODRAFT_48156 [Selaginella moellendorffii]
          Length = 206

 Score =  296 bits (757), Expect = 1e-77
 Identities = 148/204 (72%), Positives = 170/204 (83%)
 Frame = -2

Query: 873 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAK 694
           R YGLIPMVIEHT+RGERAYDIFSRLLKERIVCI+GPI+DDTAS+VVAQLL+LESENP K
Sbjct: 2   RLYGLIPMVIEHTARGERAYDIFSRLLKERIVCIHGPIADDTASLVVAQLLYLESENPLK 61

Query: 693 PIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXGERRALPYS 514
           PIHLYINSPGG VTAGLAIYDTMQYIRSPVSTLC                 G+RR+LP +
Sbjct: 62  PIHLYINSPGGVVTAGLAIYDTMQYIRSPVSTLCVGQAASMGSLLLAAGEPGQRRSLPNA 121

Query: 513 RVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPD 334
           RVM+HQPSGGASGQA++IAI A+EIL +R RLN++Y +HTG  IE+I+  MERD FMSP+
Sbjct: 122 RVMVHQPSGGASGQASDIAIQAREILDMRSRLNKLYAKHTGSSIEKIDQSMERDHFMSPE 181

Query: 333 EAKEFGLVDEVITHRPLALVTDAV 262
           EAKEFGL+DEVI  RP +LV D+V
Sbjct: 182 EAKEFGLIDEVIVQRPESLVADSV 205


>dbj|BAJ90210.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 285

 Score =  295 bits (756), Expect = 1e-77
 Identities = 154/245 (62%), Positives = 185/245 (75%), Gaps = 2/245 (0%)
 Frame = -2

Query: 933 RRLAL--SGSIIPSARRAGAGCRSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCINGPI 760
           RRLA+  S    P      +  R YGL+PMV+E TSRGERAYDIFSRLLKERIVCI+GPI
Sbjct: 31  RRLAVFSSAPYQPPEPEGYSSVREYGLVPMVVETTSRGERAYDIFSRLLKERIVCIHGPI 90

Query: 759 SDDTASVVVAQLLFLESENPAKPIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXXXX 580
           +D+TAS+VVAQLLFLESENP KPI LYINSPGG VTAGLAIYDTMQYIR PV+T+C    
Sbjct: 91  ADETASLVVAQLLFLESENPLKPISLYINSPGGVVTAGLAIYDTMQYIRCPVNTICIGQA 150

Query: 579 XXXXXXXXXXXXXGERRALPYSRVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIYVR 400
                        GERRALP +RVMIHQPSGGA GQAT+IAI AKEILK+R+RLN+IY +
Sbjct: 151 ASMGSLLLAAGARGERRALPNARVMIHQPSGGAQGQATDIAIQAKEILKLRDRLNKIYAK 210

Query: 399 HTGQPIERIEHCMERDMFMSPDEAKEFGLVDEVITHRPLALVTDAVPDQEASNEGTKNGN 220
           HTGQ I++IE CMERD+FM P+EA+E+GL+DEVI +RP +L+ + +   +  + G   G 
Sbjct: 211 HTGQNIDKIEQCMERDLFMDPEEAREWGLIDEVIENRPASLMPEGLSAVDPPHHG-GGGG 269

Query: 219 DDGSG 205
            +G G
Sbjct: 270 PNGRG 274