BLASTX nr result
ID: Zingiber23_contig00009509
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00009509
(1126 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY04163.1| Peptidyl-tRNA hydrolase family protein isoform 3,... 356 8e-96
gb|EOY04161.1| Peptidyl-tRNA hydrolase family protein isoform 1 ... 356 8e-96
ref|XP_003565295.1| PREDICTED: chloroplastic group IIB intron sp... 353 9e-95
ref|XP_004968049.1| PREDICTED: chloroplastic group IIB intron sp... 351 4e-94
gb|EMJ18952.1| hypothetical protein PRUPE_ppa010513mg [Prunus pe... 349 1e-93
ref|NP_001041935.1| Os01g0132800 [Oryza sativa Japonica Group] g... 346 9e-93
ref|XP_006482233.1| PREDICTED: chloroplastic group IIB intron sp... 345 3e-92
gb|EEC69884.1| hypothetical protein OsI_00266 [Oryza sativa Indi... 345 3e-92
ref|XP_006645469.1| PREDICTED: chloroplastic group IIB intron sp... 344 3e-92
ref|XP_002305823.1| peptidyl-tRNA hydrolase family protein [Popu... 344 4e-92
ref|XP_004299957.1| PREDICTED: chloroplastic group IIB intron sp... 342 1e-91
ref|XP_006357844.1| PREDICTED: chloroplastic group IIB intron sp... 342 2e-91
ref|NP_001104963.1| chloroplastic group IIB intron splicing faci... 342 2e-91
gb|ACF83436.1| unknown [Zea mays] gi|413947310|gb|AFW79959.1| ch... 342 2e-91
ref|XP_006430750.1| hypothetical protein CICLE_v10012586mg [Citr... 340 6e-91
ref|XP_002457428.1| hypothetical protein SORBIDRAFT_03g007130 [S... 340 6e-91
ref|XP_002516738.1| peptidyl-tRNA hydrolase, putative [Ricinus c... 338 2e-90
ref|XP_004145630.1| PREDICTED: chloroplastic group IIB intron sp... 338 2e-90
ref|XP_002284030.1| PREDICTED: chloroplastic group IIB intron sp... 338 2e-90
gb|ESW11164.1| hypothetical protein PHAVU_008G007300g [Phaseolus... 337 5e-90
>gb|EOY04163.1| Peptidyl-tRNA hydrolase family protein isoform 3, partial
[Theobroma cacao]
Length = 222
Score = 356 bits (914), Expect = 8e-96
Identities = 169/211 (80%), Positives = 189/211 (89%)
Frame = +1
Query: 238 ASLPDPNERTNPEYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRAEGITLNSIQSKAL 417
ASLPD N+ EYTPWLI GLGNPGNKYHGTRHNVGFEMID IS+ EGI LN+IQSKAL
Sbjct: 12 ASLPDNNDGFKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDQISQVEGIALNTIQSKAL 71
Query: 418 IGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPNGVLRVQRK 597
IG+G+IGEVPILL KPQ+YMN+ GESVGPLAAYYQVPLRHILL+YDEMSLPNGVLR+Q K
Sbjct: 72 IGLGAIGEVPILLAKPQAYMNFCGESVGPLAAYYQVPLRHILLIYDEMSLPNGVLRLQPK 131
Query: 598 GGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERIQMDSALEQ 777
GGHGHHNGVKSV+ HLD CR+FPRLCIGIGNPPG+MDM+A+LLQKFS+ ER Q+D+ALEQ
Sbjct: 132 GGHGHHNGVKSVMGHLDGCREFPRLCIGIGNPPGSMDMKAYLLQKFSSVERNQIDAALEQ 191
Query: 778 GVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 870
GV+AVRT+V GFS + RFNL QKYKYHKV
Sbjct: 192 GVEAVRTIVLNGFSHKITRFNLGQKYKYHKV 222
>gb|EOY04161.1| Peptidyl-tRNA hydrolase family protein isoform 1 [Theobroma cacao]
gi|508712265|gb|EOY04162.1| Peptidyl-tRNA hydrolase
family protein isoform 1 [Theobroma cacao]
Length = 244
Score = 356 bits (914), Expect = 8e-96
Identities = 169/211 (80%), Positives = 189/211 (89%)
Frame = +1
Query: 238 ASLPDPNERTNPEYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRAEGITLNSIQSKAL 417
ASLPD N+ EYTPWLI GLGNPGNKYHGTRHNVGFEMID IS+ EGI LN+IQSKAL
Sbjct: 34 ASLPDNNDGFKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDQISQVEGIALNTIQSKAL 93
Query: 418 IGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPNGVLRVQRK 597
IG+G+IGEVPILL KPQ+YMN+ GESVGPLAAYYQVPLRHILL+YDEMSLPNGVLR+Q K
Sbjct: 94 IGLGAIGEVPILLAKPQAYMNFCGESVGPLAAYYQVPLRHILLIYDEMSLPNGVLRLQPK 153
Query: 598 GGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERIQMDSALEQ 777
GGHGHHNGVKSV+ HLD CR+FPRLCIGIGNPPG+MDM+A+LLQKFS+ ER Q+D+ALEQ
Sbjct: 154 GGHGHHNGVKSVMGHLDGCREFPRLCIGIGNPPGSMDMKAYLLQKFSSVERNQIDAALEQ 213
Query: 778 GVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 870
GV+AVRT+V GFS + RFNL QKYKYHKV
Sbjct: 214 GVEAVRTIVLNGFSHKITRFNLGQKYKYHKV 244
>ref|XP_003565295.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic-like [Brachypodium distachyon]
Length = 369
Score = 353 bits (905), Expect = 9e-95
Identities = 167/224 (74%), Positives = 196/224 (87%)
Frame = +1
Query: 199 TAAPSSXXXXXXVASLPDPNERTNPEYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRA 378
TA+P VAS+PDP R EYTPWLIAGLGNPG KYHGTRHNVGFEM+D I++
Sbjct: 147 TASPPRRTRLTVVASVPDPAARP-AEYTPWLIAGLGNPGGKYHGTRHNVGFEMVDRIAQV 205
Query: 379 EGITLNSIQSKALIGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDE 558
EGI +N+IQSK+L+G+GSIGEVP+LLVKPQSYMNY GE++GPLAAYYQVPLRHIL++YDE
Sbjct: 206 EGIVMNTIQSKSLLGVGSIGEVPVLLVKPQSYMNYCGEAIGPLAAYYQVPLRHILVIYDE 265
Query: 559 MSLPNGVLRVQRKGGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFS 738
MSLPNGVLR+QRKGGHG HNG+++VI HLD CR+FPRL IGIG+PPG MD RAFLLQKFS
Sbjct: 266 MSLPNGVLRLQRKGGHGRHNGLQNVIEHLDGCREFPRLSIGIGSPPGKMDTRAFLLQKFS 325
Query: 739 NEERIQMDSALEQGVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 870
+EER+Q+D ALEQGVDAVRTLV KGFS ++ RFNLVQKYK+++V
Sbjct: 326 SEERVQIDIALEQGVDAVRTLVLKGFSGSIERFNLVQKYKFNRV 369
>ref|XP_004968049.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic-like isoform X1 [Setaria italica]
Length = 256
Score = 351 bits (900), Expect = 4e-94
Identities = 167/213 (78%), Positives = 195/213 (91%), Gaps = 1/213 (0%)
Frame = +1
Query: 235 VASLPDPNERTNP-EYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRAEGITLNSIQSK 411
VAS+PDP P EYTPWLIAGLGNPGNKY+GTRHNVGFEM+D I+R EGIT+N+IQSK
Sbjct: 46 VASVPDP--AAGPVEYTPWLIAGLGNPGNKYYGTRHNVGFEMVDRIAREEGITMNTIQSK 103
Query: 412 ALIGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPNGVLRVQ 591
+L+G+GSIGEVP+LLVKPQSYMNYSGE++GPLAAYYQVPLRHILL+YD+MSLPNGVLR+Q
Sbjct: 104 SLLGVGSIGEVPVLLVKPQSYMNYSGEAIGPLAAYYQVPLRHILLVYDDMSLPNGVLRLQ 163
Query: 592 RKGGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERIQMDSAL 771
RKGGHG HNG+++VI HLD R+FPRL IGIG+PPG MD RAFLLQKFS+EER+Q+D+AL
Sbjct: 164 RKGGHGRHNGLQNVIEHLDGRREFPRLSIGIGSPPGKMDTRAFLLQKFSSEERVQIDTAL 223
Query: 772 EQGVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 870
EQGVDAVRTLV KGFS ++ RFNLVQKYK+H+V
Sbjct: 224 EQGVDAVRTLVLKGFSGSIERFNLVQKYKFHRV 256
>gb|EMJ18952.1| hypothetical protein PRUPE_ppa010513mg [Prunus persica]
Length = 247
Score = 349 bits (896), Expect = 1e-93
Identities = 162/211 (76%), Positives = 187/211 (88%)
Frame = +1
Query: 238 ASLPDPNERTNPEYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRAEGITLNSIQSKAL 417
ASLP+ N EYTPWLI GLGNPGNKYHGTRHN+GFEMID I++ +G+ +N+IQSKAL
Sbjct: 37 ASLPENNNGAKVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDSIAKTQGVVMNTIQSKAL 96
Query: 418 IGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPNGVLRVQRK 597
+GIGSIGEVPILL KPQ+YMNYSGESVGPLAAYYQVPLRHILL+YDEMSLPNGVLR+Q K
Sbjct: 97 VGIGSIGEVPILLAKPQAYMNYSGESVGPLAAYYQVPLRHILLVYDEMSLPNGVLRIQPK 156
Query: 598 GGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERIQMDSALEQ 777
GGHG+HNGVKSV+ HLD CR+FPRLCIGIGNPPG MDM+A+LLQ+FS ER Q+D+AL+Q
Sbjct: 157 GGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQ 216
Query: 778 GVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 870
GV+AVRTLV GF +++ FNL QKYKYHKV
Sbjct: 217 GVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 247
>ref|NP_001041935.1| Os01g0132800 [Oryza sativa Japonica Group]
gi|75288538|sp|Q5ZCL8.1|CRS2_ORYSJ RecName:
Full=Chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic; AltName: Full=CRS2-like protein;
AltName: Full=Chloroplastic RNA splicing factor 2;
Flags: Precursor gi|53792159|dbj|BAD52792.1| putative
peptidyl-tRNA hydrolase [Oryza sativa Japonica Group]
gi|113531466|dbj|BAF03849.1| Os01g0132800 [Oryza sativa
Japonica Group] gi|215687059|dbj|BAG90905.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222617682|gb|EEE53814.1| hypothetical protein
OsJ_00257 [Oryza sativa Japonica Group]
Length = 259
Score = 346 bits (888), Expect = 9e-93
Identities = 165/212 (77%), Positives = 192/212 (90%)
Frame = +1
Query: 235 VASLPDPNERTNPEYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRAEGITLNSIQSKA 414
VAS+PDP R EYTPWLIAGLGNPG+KYHGTRHNVGFEM+D I+R EGIT+N+IQSK+
Sbjct: 49 VASVPDPAARP-AEYTPWLIAGLGNPGSKYHGTRHNVGFEMVDRIARDEGITMNTIQSKS 107
Query: 415 LIGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPNGVLRVQR 594
L+GIGSIGEVP+LLVKPQSY+NYSGE++GPLAAYYQVPLRHIL+MYDEMSLPNGVLR+QR
Sbjct: 108 LLGIGSIGEVPVLLVKPQSYINYSGEAIGPLAAYYQVPLRHILVMYDEMSLPNGVLRLQR 167
Query: 595 KGGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERIQMDSALE 774
KGGHG HNG+++V+ LD R+ PRL IGIG+PPG MD RAFLLQKFS+EER+Q+D+ALE
Sbjct: 168 KGGHGRHNGLQNVMECLDSSRELPRLSIGIGSPPGKMDTRAFLLQKFSSEERLQIDTALE 227
Query: 775 QGVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 870
QGVDAVRTLV KGFS ++ RFNLVQKYK+H V
Sbjct: 228 QGVDAVRTLVLKGFSGSIERFNLVQKYKFHSV 259
>ref|XP_006482233.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2-A, chloroplastic-like isoform X1 [Citrus sinensis]
Length = 244
Score = 345 bits (884), Expect = 3e-92
Identities = 164/211 (77%), Positives = 187/211 (88%)
Frame = +1
Query: 238 ASLPDPNERTNPEYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRAEGITLNSIQSKAL 417
ASLPD N EYTPWLI GLGNPG KYHGTRHNVGFEMIDHI++A+ I +N+IQSKAL
Sbjct: 34 ASLPDDNGGFKVEYTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKAL 93
Query: 418 IGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPNGVLRVQRK 597
IGIGSIGEVPILL KPQ+YMN+SGESVGPLAA+YQVPLRHIL++YDEMSL NGVLR+Q K
Sbjct: 94 IGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPK 153
Query: 598 GGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERIQMDSALEQ 777
GGHGHHNG+KSV++HLD CR+FPRLCIGIGNPPG MDM+A+LLQKFS ER Q+D+ALEQ
Sbjct: 154 GGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQ 213
Query: 778 GVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 870
GV+AVRTLV GF +N+ RFN+ QKYKYH V
Sbjct: 214 GVEAVRTLVLNGFDQNISRFNMGQKYKYHAV 244
>gb|EEC69884.1| hypothetical protein OsI_00266 [Oryza sativa Indica Group]
Length = 259
Score = 345 bits (884), Expect = 3e-92
Identities = 164/212 (77%), Positives = 192/212 (90%)
Frame = +1
Query: 235 VASLPDPNERTNPEYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRAEGITLNSIQSKA 414
VAS+PDP R EYTPWLIAGLGNPG+KYHGTRHNVGFEM+D I+R EGIT+N+IQSK+
Sbjct: 49 VASVPDPAARP-AEYTPWLIAGLGNPGSKYHGTRHNVGFEMVDRIARDEGITMNTIQSKS 107
Query: 415 LIGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPNGVLRVQR 594
L+GIGSIGEVP+LLVKPQSY+NYSGE++GPLAAYYQVPLRHIL+MYDEMSLPNGVLR+QR
Sbjct: 108 LLGIGSIGEVPVLLVKPQSYINYSGEAIGPLAAYYQVPLRHILVMYDEMSLPNGVLRLQR 167
Query: 595 KGGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERIQMDSALE 774
KGGHG HNG+++V+ LD R+ PRL IGIG+PPG MD RAFLLQKFS+EE++Q+D+ALE
Sbjct: 168 KGGHGRHNGLQNVMECLDSSRELPRLSIGIGSPPGKMDTRAFLLQKFSSEEQLQIDTALE 227
Query: 775 QGVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 870
QGVDAVRTLV KGFS ++ RFNLVQKYK+H V
Sbjct: 228 QGVDAVRTLVLKGFSGSIERFNLVQKYKFHSV 259
>ref|XP_006645469.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic-like, partial [Oryza brachyantha]
Length = 227
Score = 344 bits (883), Expect = 3e-92
Identities = 162/212 (76%), Positives = 192/212 (90%)
Frame = +1
Query: 235 VASLPDPNERTNPEYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRAEGITLNSIQSKA 414
VAS+PDP R EYTPWLIAGLGNPGNKYHGTRHNVGFEM+D I+R EGIT+N+IQSK+
Sbjct: 17 VASVPDPAARP-AEYTPWLIAGLGNPGNKYHGTRHNVGFEMVDRIAREEGITMNTIQSKS 75
Query: 415 LIGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPNGVLRVQR 594
L+G+GSIGEVP+LLVKPQSY+NYSGE++ PLAAYY+VPLRHIL++YDEMSLPNGVLR+QR
Sbjct: 76 LLGVGSIGEVPVLLVKPQSYINYSGEAIAPLAAYYEVPLRHILVIYDEMSLPNGVLRLQR 135
Query: 595 KGGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERIQMDSALE 774
KGGHG HNG+++V+ +LD R+ PRL IGIG+PPG MD RAFLLQKFS+EER+Q+D+ALE
Sbjct: 136 KGGHGRHNGLQNVMENLDGSRELPRLSIGIGSPPGKMDTRAFLLQKFSSEERLQIDTALE 195
Query: 775 QGVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 870
QGVDAVRTLV KGFS ++ RFNLVQKYK+H V
Sbjct: 196 QGVDAVRTLVLKGFSGSIERFNLVQKYKFHSV 227
>ref|XP_002305823.1| peptidyl-tRNA hydrolase family protein [Populus trichocarpa]
gi|222848787|gb|EEE86334.1| peptidyl-tRNA hydrolase
family protein [Populus trichocarpa]
Length = 244
Score = 344 bits (882), Expect = 4e-92
Identities = 161/211 (76%), Positives = 185/211 (87%)
Frame = +1
Query: 238 ASLPDPNERTNPEYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRAEGITLNSIQSKAL 417
ASLPD EYTPWLI GLGNPG KYHGTRHNVGFEMID I++AEG+ +N+IQSKAL
Sbjct: 34 ASLPDNANGVKVEYTPWLIVGLGNPGTKYHGTRHNVGFEMIDRIAQAEGVLMNTIQSKAL 93
Query: 418 IGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPNGVLRVQRK 597
IGIG IGEVPILL KPQ+YMN+SGESVGPLAA+Y++PLRHILL+YDEM+LPNG+LRVQ K
Sbjct: 94 IGIGCIGEVPILLAKPQAYMNFSGESVGPLAAHYKIPLRHILLIYDEMNLPNGILRVQPK 153
Query: 598 GGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERIQMDSALEQ 777
GGHGHHNGVKSV+ HLD CR+FPRLCIGIGNPPG MDM+AFLLQKFS ER Q+D++LEQ
Sbjct: 154 GGHGHHNGVKSVMDHLDGCREFPRLCIGIGNPPGTMDMKAFLLQKFSPTEREQIDASLEQ 213
Query: 778 GVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 870
GV+A+RTL+ GF+ + RFNL QKYKYHKV
Sbjct: 214 GVEAMRTLILGGFTNKITRFNLGQKYKYHKV 244
>ref|XP_004299957.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 275
Score = 342 bits (878), Expect = 1e-91
Identities = 161/211 (76%), Positives = 185/211 (87%)
Frame = +1
Query: 238 ASLPDPNERTNPEYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRAEGITLNSIQSKAL 417
A LP+ +R EYTPW+I GLGNPGNKYHGTRHNVGFEMID IS+ +GI +N+IQSKAL
Sbjct: 65 APLPENEDRFKVEYTPWMIVGLGNPGNKYHGTRHNVGFEMIDTISKTQGIVMNTIQSKAL 124
Query: 418 IGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPNGVLRVQRK 597
+GIGSIGEVPIL+VKPQ+YM+YSGE+VGPLAAYYQVPLRHILL+YDEMSLPNGVLR+Q K
Sbjct: 125 VGIGSIGEVPILVVKPQAYMSYSGEAVGPLAAYYQVPLRHILLVYDEMSLPNGVLRLQPK 184
Query: 598 GGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERIQMDSALEQ 777
GHG+HNGVKSV+ HLD CRDFPRLCIGIGNPPG MDM+A+LLQKFS ER Q+D+AL Q
Sbjct: 185 AGHGYHNGVKSVVGHLDGCRDFPRLCIGIGNPPGTMDMKAYLLQKFSTVERHQIDAALGQ 244
Query: 778 GVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 870
GV+AV+TLV GF N+ FNL QKYK+HKV
Sbjct: 245 GVEAVKTLVLNGFDPNITSFNLRQKYKHHKV 275
>ref|XP_006357844.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic-like isoform X1 [Solanum tuberosum]
Length = 243
Score = 342 bits (877), Expect = 2e-91
Identities = 161/212 (75%), Positives = 187/212 (88%)
Frame = +1
Query: 235 VASLPDPNERTNPEYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRAEGITLNSIQSKA 414
+ASLP+PN E+TPWLI GLGNPGNKYHGTRHNVGFEMID +S+ EGI LN+IQSKA
Sbjct: 33 LASLPEPNG-VKVEFTPWLIVGLGNPGNKYHGTRHNVGFEMIDRVSQEEGIVLNTIQSKA 91
Query: 415 LIGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPNGVLRVQR 594
LIGIGSIGEVP++L KPQ+YMN+SGESVGPLAAYYQVPLRHILL+YDEMSLPNG+LR+Q
Sbjct: 92 LIGIGSIGEVPVVLAKPQAYMNFSGESVGPLAAYYQVPLRHILLVYDEMSLPNGILRLQP 151
Query: 595 KGGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERIQMDSALE 774
KGGHGHHNGVKSV+ HL+ RDFPR CIGIGNPPG MDM+A+LLQKFS+ ER Q+D+AL+
Sbjct: 152 KGGHGHHNGVKSVMEHLNGRRDFPRFCIGIGNPPGTMDMKAYLLQKFSDTERKQVDAALD 211
Query: 775 QGVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 870
QGV A+RT+V +GF + RFN+ QKYKYHKV
Sbjct: 212 QGVAAMRTVVLEGFGSRISRFNIGQKYKYHKV 243
>ref|NP_001104963.1| chloroplastic group IIB intron splicing facilitator CRS2,
chloroplastic precursor [Zea mays]
gi|75312019|sp|Q9M5P4.1|CRS2_MAIZE RecName:
Full=Chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 2; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 2; Flags: Precursor
gi|6752919|gb|AAF27939.1|AF225708_1 CRS2 [Zea mays]
Length = 256
Score = 342 bits (876), Expect = 2e-91
Identities = 163/213 (76%), Positives = 192/213 (90%), Gaps = 1/213 (0%)
Frame = +1
Query: 235 VASLPDPNERTNP-EYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRAEGITLNSIQSK 411
V+S+PDP P EYTPWLIAGLGNPGNKY+GTRHNVGFEM+D I+ EGIT+N+IQSK
Sbjct: 46 VSSVPDP--AAGPVEYTPWLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSK 103
Query: 412 ALIGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPNGVLRVQ 591
+L+GIGSIGEVP+L+VKPQSYMNYSGE++GPLAAYYQVPLRHILL+YD+ SLPNGVLR+Q
Sbjct: 104 SLLGIGSIGEVPVLVVKPQSYMNYSGEAIGPLAAYYQVPLRHILLIYDDTSLPNGVLRLQ 163
Query: 592 RKGGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERIQMDSAL 771
+KGGHG HNG+++VI HLD R+FPRL IGIG+PPG MD RAFLLQKFS+EER+Q+D+AL
Sbjct: 164 KKGGHGRHNGLQNVIEHLDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTAL 223
Query: 772 EQGVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 870
EQGVDAVRTLV KGFS + RFNLVQKYK+H+V
Sbjct: 224 EQGVDAVRTLVLKGFSGSTERFNLVQKYKFHRV 256
>gb|ACF83436.1| unknown [Zea mays] gi|413947310|gb|AFW79959.1| chloroplast RNA
splicing2 [Zea mays]
Length = 256
Score = 342 bits (876), Expect = 2e-91
Identities = 163/213 (76%), Positives = 192/213 (90%), Gaps = 1/213 (0%)
Frame = +1
Query: 235 VASLPDPNERTNP-EYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRAEGITLNSIQSK 411
V+S+PDP P EYTPWLIAGLGNPGNKY+GTRHNVGFEM+D I+ EGIT+N+IQSK
Sbjct: 46 VSSVPDP--AAGPVEYTPWLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSK 103
Query: 412 ALIGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPNGVLRVQ 591
+L+GIGSIGEVP+L+VKPQSYMNYSGE++GPLAAYYQVPLRHILL+YD+ SLPNGVLR+Q
Sbjct: 104 SLLGIGSIGEVPVLVVKPQSYMNYSGEAIGPLAAYYQVPLRHILLIYDDTSLPNGVLRLQ 163
Query: 592 RKGGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERIQMDSAL 771
+KGGHG HNG+++VI HLD R+FPRL IGIG+PPG MD RAFLLQKFS+EER+Q+D+AL
Sbjct: 164 KKGGHGRHNGLQNVIEHLDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTAL 223
Query: 772 EQGVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 870
EQGVDAVRTLV KGFS + RFNLVQKYK+H+V
Sbjct: 224 EQGVDAVRTLVLKGFSGSTERFNLVQKYKFHRV 256
>ref|XP_006430750.1| hypothetical protein CICLE_v10012586mg [Citrus clementina]
gi|557532807|gb|ESR43990.1| hypothetical protein
CICLE_v10012586mg [Citrus clementina]
Length = 244
Score = 340 bits (872), Expect = 6e-91
Identities = 162/211 (76%), Positives = 186/211 (88%)
Frame = +1
Query: 238 ASLPDPNERTNPEYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRAEGITLNSIQSKAL 417
ASLP N EYTPWLI GLGNPG KYHGTRHNVGFEMIDHI++A+ I +N+IQSKAL
Sbjct: 34 ASLPADNGGFKVEYTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKAL 93
Query: 418 IGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPNGVLRVQRK 597
IGIGSIGEVPILL KPQ+YMN+SGESVGPLAA+YQVPLRHIL++YDEMSL NGVLR+Q K
Sbjct: 94 IGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPK 153
Query: 598 GGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERIQMDSALEQ 777
GGHGHHNG+KSV++HLD CR+FPRLCIGIGNPPG MDM+A+LLQKFS E+ Q+D+ALEQ
Sbjct: 154 GGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEQEQIDAALEQ 213
Query: 778 GVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 870
GV+AVRTLV GF +N+ RFN+ QKYKYH V
Sbjct: 214 GVEAVRTLVLNGFDQNISRFNMGQKYKYHAV 244
>ref|XP_002457428.1| hypothetical protein SORBIDRAFT_03g007130 [Sorghum bicolor]
gi|241929403|gb|EES02548.1| hypothetical protein
SORBIDRAFT_03g007130 [Sorghum bicolor]
Length = 256
Score = 340 bits (872), Expect = 6e-91
Identities = 163/213 (76%), Positives = 192/213 (90%), Gaps = 1/213 (0%)
Frame = +1
Query: 235 VASLPDPNERTNP-EYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRAEGITLNSIQSK 411
VAS+PDP P EYTPWLIAGLGNPGNKY+GTRHNVGFEM+D I+ EGIT+N+IQSK
Sbjct: 46 VASVPDP--AAGPVEYTPWLIAGLGNPGNKYYGTRHNVGFEMVDRIAGEEGITMNTIQSK 103
Query: 412 ALIGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPNGVLRVQ 591
+L+GIGSIGEVP+L+VKPQSYMNYSGE++GPLAAYYQVPLRHILL+YD+MSLPNGVLR+Q
Sbjct: 104 SLLGIGSIGEVPVLVVKPQSYMNYSGEAIGPLAAYYQVPLRHILLIYDDMSLPNGVLRLQ 163
Query: 592 RKGGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERIQMDSAL 771
+KGGHG HNG+++VI +LD R+FPRL IGIG+PPG MD RAFLLQKFS+EER+Q+D++L
Sbjct: 164 KKGGHGRHNGLQNVIENLDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDASL 223
Query: 772 EQGVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 870
EQGVDAVRTLV KGF + RFNLVQKYK+HKV
Sbjct: 224 EQGVDAVRTLVLKGFCGSTERFNLVQKYKFHKV 256
>ref|XP_002516738.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
gi|223544111|gb|EEF45636.1| peptidyl-tRNA hydrolase,
putative [Ricinus communis]
Length = 253
Score = 338 bits (868), Expect = 2e-90
Identities = 166/219 (75%), Positives = 187/219 (85%), Gaps = 9/219 (4%)
Frame = +1
Query: 241 SLPDP-NERTNPEYTPWLIAGLGNPGNKYHGTRHNV--------GFEMIDHISRAEGITL 393
SLP+ N EYTPWLI GLGNPGNKYHGTRHNV GFEMID I++AE + +
Sbjct: 35 SLPENGNGVAKIEYTPWLIVGLGNPGNKYHGTRHNVTNASLDLVGFEMIDKIAKAEAVAM 94
Query: 394 NSIQSKALIGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPN 573
N+IQSKALIGIG I EVPILLVKPQ+YMN+SGESVGPLAA+YQVPLRHILL+YDEMSLPN
Sbjct: 95 NTIQSKALIGIGCIKEVPILLVKPQAYMNFSGESVGPLAAHYQVPLRHILLIYDEMSLPN 154
Query: 574 GVLRVQRKGGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERI 753
GV+R+Q KGGHGHHNGVKSV+ HLD CR+FPRLCIGIGNPPG MDMRAFLLQKFS+ ER
Sbjct: 155 GVMRLQPKGGHGHHNGVKSVMEHLDGCREFPRLCIGIGNPPGTMDMRAFLLQKFSSTERE 214
Query: 754 QMDSALEQGVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 870
Q+D+AL QG+DAVRTLV GF++N+ RFNL QKYKYHKV
Sbjct: 215 QIDAALGQGIDAVRTLVLSGFNQNITRFNLGQKYKYHKV 253
>ref|XP_004145630.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic-like [Cucumis sativus]
gi|449519774|ref|XP_004166909.1| PREDICTED:
chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic-like [Cucumis sativus]
Length = 249
Score = 338 bits (867), Expect = 2e-90
Identities = 162/212 (76%), Positives = 185/212 (87%), Gaps = 1/212 (0%)
Frame = +1
Query: 238 ASLPDPNER-TNPEYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRAEGITLNSIQSKA 414
AS PD + EYTPWLI GLGNPGNKYHGTRHNVGFEMID I++A+GI +N+IQSKA
Sbjct: 38 ASSPDSDSNGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKA 97
Query: 415 LIGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPNGVLRVQR 594
LIGIGSIGEVPILL KPQ+YMN+ GESVGPLAA+YQ+PLRH+LL YDEM+LPNGVLR+Q
Sbjct: 98 LIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHVLLTYDEMNLPNGVLRLQP 157
Query: 595 KGGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERIQMDSALE 774
K GHGHHNGVKSV+ HLD R+FPRLCIGIGNPPG MDM+AFLLQKFS+ ER Q+D+ALE
Sbjct: 158 KAGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALE 217
Query: 775 QGVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 870
QGV+AVRTL GFS+ ++RFNL QKYKYHKV
Sbjct: 218 QGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 249
>ref|XP_002284030.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic [Vitis vinifera]
gi|296087264|emb|CBI33638.3| unnamed protein product
[Vitis vinifera]
Length = 246
Score = 338 bits (867), Expect = 2e-90
Identities = 163/211 (77%), Positives = 184/211 (87%)
Frame = +1
Query: 238 ASLPDPNERTNPEYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRAEGITLNSIQSKAL 417
ASLPD N EYTPWLI GLGNPGNKYHGTRHNVGFEMID IS+ EGI LN+IQSKAL
Sbjct: 37 ASLPDANG-IKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDRISQEEGILLNTIQSKAL 95
Query: 418 IGIGSIGEVPILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPNGVLRVQRK 597
IGIGSIGEVPILL KPQ+YMN+SGESVGPLAAYYQVPLRHIL++YDEM+LPNGVLR+ +
Sbjct: 96 IGIGSIGEVPILLAKPQAYMNFSGESVGPLAAYYQVPLRHILVVYDEMNLPNGVLRLAPR 155
Query: 598 GGHGHHNGVKSVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERIQMDSALEQ 777
GGHG+HNG+K+V+ HLD CR+FPRLCIGIGNPPG MDM+A+LLQKFS EER Q+D+A EQ
Sbjct: 156 GGHGYHNGLKNVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQKFSFEERKQIDAAQEQ 215
Query: 778 GVDAVRTLVFKGFSENLHRFNLVQKYKYHKV 870
G+ AVR LV GF+ + RFNL QKYKYHKV
Sbjct: 216 GIGAVRNLVLNGFNHSTTRFNLGQKYKYHKV 246
>gb|ESW11164.1| hypothetical protein PHAVU_008G007300g [Phaseolus vulgaris]
Length = 247
Score = 337 bits (864), Expect = 5e-90
Identities = 157/199 (78%), Positives = 182/199 (91%)
Frame = +1
Query: 274 EYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRAEGITLNSIQSKALIGIGSIGEVPIL 453
EYTPWLI GLGNPGNKYHGTRHN+GFE+ID +S+AEGI +N+IQSKALIGIGSIGEVPIL
Sbjct: 49 EYTPWLIVGLGNPGNKYHGTRHNIGFEIIDSLSQAEGIKMNTIQSKALIGIGSIGEVPIL 108
Query: 454 LVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPNGVLRVQRKGGHGHHNGVKSV 633
L KPQ+YMN+SGESVGPLAAYYQVPLRHILL+YDE SLPNGVLR+Q KGGHGHHNG+K+V
Sbjct: 109 LAKPQTYMNFSGESVGPLAAYYQVPLRHILLVYDETSLPNGVLRLQPKGGHGHHNGLKNV 168
Query: 634 IHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERIQMDSALEQGVDAVRTLVFKG 813
+ HLD C FPRL +GIGNPPG MD+RAFLLQKFS+ ER+Q+D++LEQGV AVRT+V KG
Sbjct: 169 MGHLDGCSAFPRLAVGIGNPPGTMDLRAFLLQKFSSAERMQIDASLEQGVVAVRTVVLKG 228
Query: 814 FSENLHRFNLVQKYKYHKV 870
F ++++RFNL QKYKYHKV
Sbjct: 229 FDQHVNRFNLGQKYKYHKV 247