BLASTX nr result
ID: Zingiber23_contig00009258
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00009258
(292 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001042820.1| Os01g0301000 [Oryza sativa Japonica Group] g... 122 5e-26
gb|EAY73658.1| hypothetical protein OsI_01545 [Oryza sativa Indi... 121 1e-25
ref|XP_003567580.1| PREDICTED: pentatricopeptide repeat-containi... 119 4e-25
dbj|BAK06496.1| predicted protein [Hordeum vulgare subsp. vulgare] 118 7e-25
gb|ACN31600.1| unknown [Zea mays] 116 3e-24
ref|XP_004967563.1| PREDICTED: pentatricopeptide repeat-containi... 115 6e-24
ref|XP_002457728.1| hypothetical protein SORBIDRAFT_03g012450 [S... 114 1e-23
gb|EOX95289.1| Tetratricopeptide repeat (TPR)-like superfamily p... 99 5e-19
ref|XP_006840468.1| hypothetical protein AMTR_s00045p00181820 [A... 96 7e-18
ref|XP_006349176.1| PREDICTED: pentatricopeptide repeat-containi... 93 3e-17
ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containi... 93 3e-17
ref|XP_006644106.1| PREDICTED: pentatricopeptide repeat-containi... 92 7e-17
gb|ACU24296.1| unknown [Glycine max] 91 1e-16
gb|ESW17131.1| hypothetical protein PHAVU_007G213200g [Phaseolus... 91 2e-16
ref|XP_004288536.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
ref|XP_004229380.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
gb|EEC70480.1| hypothetical protein OsI_01546 [Oryza sativa Indi... 91 2e-16
ref|NP_001042823.1| Os01g0301500 [Oryza sativa Japonica Group] g... 91 2e-16
ref|XP_004495896.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
ref|XP_002515265.1| pentatricopeptide repeat-containing protein,... 88 1e-15
>ref|NP_001042820.1| Os01g0301000 [Oryza sativa Japonica Group]
gi|57899052|dbj|BAD87826.1| putative DNA-binding protein
[Oryza sativa Japonica Group]
gi|113532351|dbj|BAF04734.1| Os01g0301000 [Oryza sativa
Japonica Group] gi|215694668|dbj|BAG89859.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215706899|dbj|BAG93359.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 522
Score = 122 bits (306), Expect = 5e-26
Identities = 61/96 (63%), Positives = 73/96 (76%)
Frame = +2
Query: 2 RYVKELRRYQRHAHALELMEWMVNNKNTKMTYINHAMQLGLIAKVRGIEAAEKYFSDLPV 181
+YVKELR+Y+RHAHALELMEWMVN K M+Y NHA++L LI KVRGIEAAE+YF+ LP
Sbjct: 93 KYVKELRKYKRHAHALELMEWMVNTKGMNMSYTNHAIRLDLIYKVRGIEAAEQYFAGLPD 152
Query: 182 QAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKML 289
KN TYGALL+ YCS K + DKA +Y +M L
Sbjct: 153 PGKNHKTYGALLNCYCSAKME--DKATDIYRKMDEL 186
>gb|EAY73658.1| hypothetical protein OsI_01545 [Oryza sativa Indica Group]
Length = 522
Score = 121 bits (303), Expect = 1e-25
Identities = 61/96 (63%), Positives = 72/96 (75%)
Frame = +2
Query: 2 RYVKELRRYQRHAHALELMEWMVNNKNTKMTYINHAMQLGLIAKVRGIEAAEKYFSDLPV 181
+YVKELR+Y+RHAHALELMEWMVN K M+Y NHA++L LI KVRGIEAAE YF+ LP
Sbjct: 93 KYVKELRKYKRHAHALELMEWMVNTKGMNMSYTNHAIRLDLIYKVRGIEAAELYFAGLPD 152
Query: 182 QAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKML 289
KN TYGALL+ YCS K + DKA +Y +M L
Sbjct: 153 PGKNHKTYGALLNCYCSAKME--DKATDIYRKMDEL 186
>ref|XP_003567580.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like [Brachypodium distachyon]
Length = 545
Score = 119 bits (298), Expect = 4e-25
Identities = 58/93 (62%), Positives = 73/93 (78%)
Frame = +2
Query: 2 RYVKELRRYQRHAHALELMEWMVNNKNTKMTYINHAMQLGLIAKVRGIEAAEKYFSDLPV 181
RYVKELR+Y+RHA ALELM+WMV+ K M+Y NHA++L L+ KVRGIEAAEKYF+ LP
Sbjct: 116 RYVKELRKYKRHAQALELMDWMVHTKGMNMSYTNHAIRLDLVYKVRGIEAAEKYFNGLPD 175
Query: 182 QAKNKHTYGALLSSYCSEKNKNADKAFSLYNEM 280
AKN TYGALL+ YCS K + +KA L+++M
Sbjct: 176 PAKNHRTYGALLNCYCSSKKE--EKATDLFHKM 206
>dbj|BAK06496.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 118 bits (296), Expect = 7e-25
Identities = 59/96 (61%), Positives = 72/96 (75%)
Frame = +2
Query: 2 RYVKELRRYQRHAHALELMEWMVNNKNTKMTYINHAMQLGLIAKVRGIEAAEKYFSDLPV 181
RYVKELRRY+RH+ ALELM+WMV+ K M+Y NHA++L LI KVRG+EAAEKYF LP
Sbjct: 122 RYVKELRRYKRHSQALELMDWMVHTKGMNMSYTNHAIRLDLIYKVRGLEAAEKYFEGLPD 181
Query: 182 QAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKML 289
AKN T+GALL+ YCS K + +KA LY +M L
Sbjct: 182 PAKNHRTFGALLNCYCSSKEE--EKATDLYRKMDEL 215
>gb|ACN31600.1| unknown [Zea mays]
Length = 515
Score = 116 bits (291), Expect = 3e-24
Identities = 57/96 (59%), Positives = 75/96 (78%)
Frame = +2
Query: 2 RYVKELRRYQRHAHALELMEWMVNNKNTKMTYINHAMQLGLIAKVRGIEAAEKYFSDLPV 181
++VKELR+Y+RHAHALELM+WMVN + M++ NHA++L LI KVRG+EAAE YF++LP
Sbjct: 86 KHVKELRKYKRHAHALELMDWMVNARGMNMSHTNHAIRLELIYKVRGLEAAENYFANLPD 145
Query: 182 QAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKML 289
AKN TYG+LLS YCS K + +KA +LY +M L
Sbjct: 146 PAKNHRTYGSLLSCYCSAKME--EKATNLYRQMDEL 179
>ref|XP_004967563.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like isoform X1 [Setaria italica]
Length = 520
Score = 115 bits (288), Expect = 6e-24
Identities = 56/96 (58%), Positives = 73/96 (76%)
Frame = +2
Query: 2 RYVKELRRYQRHAHALELMEWMVNNKNTKMTYINHAMQLGLIAKVRGIEAAEKYFSDLPV 181
++VKELR+Y+RHAHALELM+WMVN + M++ NHA++L LI KVRG+EAAE YF+ LP
Sbjct: 91 KHVKELRKYKRHAHALELMDWMVNARGMHMSHTNHAIRLDLIYKVRGLEAAENYFASLPD 150
Query: 182 QAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKML 289
AKN TYGALL+ YCS K + +KA +Y +M L
Sbjct: 151 PAKNHRTYGALLNCYCSAKME--EKAIDIYRKMDEL 184
>ref|XP_002457728.1| hypothetical protein SORBIDRAFT_03g012450 [Sorghum bicolor]
gi|241929703|gb|EES02848.1| hypothetical protein
SORBIDRAFT_03g012450 [Sorghum bicolor]
Length = 530
Score = 114 bits (286), Expect = 1e-23
Identities = 57/96 (59%), Positives = 73/96 (76%)
Frame = +2
Query: 2 RYVKELRRYQRHAHALELMEWMVNNKNTKMTYINHAMQLGLIAKVRGIEAAEKYFSDLPV 181
++VKELR+Y+RHAHALE+M+WMVN + M+ NHA++L LI KVRG+EAAE YF++LP
Sbjct: 102 KHVKELRKYKRHAHALEVMDWMVNARGMNMSITNHAIRLDLIYKVRGLEAAENYFANLPD 161
Query: 182 QAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKML 289
AKN TYGALLS YCS K + +KA LY +M L
Sbjct: 162 PAKNHRTYGALLSCYCSAKME--EKATYLYRQMDEL 195
>gb|EOX95289.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao]
Length = 501
Score = 99.4 bits (246), Expect = 5e-19
Identities = 50/96 (52%), Positives = 71/96 (73%)
Frame = +2
Query: 2 RYVKELRRYQRHAHALELMEWMVNNKNTKMTYINHAMQLGLIAKVRGIEAAEKYFSDLPV 181
R VKELR+Y+R+ HAL++M+WM +N +++++HA++L LIAK +GI+AAE Y S LP
Sbjct: 76 RCVKELRKYRRYQHALDIMDWM-ERRNLHLSHVDHAIRLDLIAKTKGIDAAENYLSALPP 134
Query: 182 QAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKML 289
AKN+ TYGALL+ YC+ N DKA SL+ +M L
Sbjct: 135 SAKNQLTYGALLNCYCN--NLMKDKASSLFQKMDEL 168
>ref|XP_006840468.1| hypothetical protein AMTR_s00045p00181820 [Amborella trichopoda]
gi|548842186|gb|ERN02143.1| hypothetical protein
AMTR_s00045p00181820 [Amborella trichopoda]
Length = 479
Score = 95.5 bits (236), Expect = 7e-18
Identities = 46/97 (47%), Positives = 74/97 (76%)
Frame = +2
Query: 2 RYVKELRRYQRHAHALELMEWMVNNKNTKMTYINHAMQLGLIAKVRGIEAAEKYFSDLPV 181
R +KELR+++R HALEL EWM + + ++Y ++A+++ L++K RG+E+AE YF+ LP
Sbjct: 94 RIIKELRKFKRFHHALELSEWM-DKRGMNLSYGDYAIRVDLLSKTRGLESAESYFTGLPH 152
Query: 182 QAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKMLN 292
AKN+++YGALL+ YC K+K +KA +L+++MK LN
Sbjct: 153 SAKNQYSYGALLNCYC--KDKLTEKAEALFSKMKELN 187
>ref|XP_006349176.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Solanum tuberosum]
Length = 495
Score = 93.2 bits (230), Expect = 3e-17
Identities = 48/94 (51%), Positives = 65/94 (69%)
Frame = +2
Query: 8 VKELRRYQRHAHALELMEWMVNNKNTKMTYINHAMQLGLIAKVRGIEAAEKYFSDLPVQA 187
+KELR+Y+R+ HALE+MEWM + +Y ++ ++L LIAKV+GI AAEKYF L
Sbjct: 71 IKELRKYKRYQHALEIMEWM-EKRGINFSYGDYGVRLDLIAKVQGITAAEKYFGGLSPSM 129
Query: 188 KNKHTYGALLSSYCSEKNKNADKAFSLYNEMKML 289
+N+ TYGALL+ YC E K ADKA S + +M L
Sbjct: 130 QNQSTYGALLNCYCVE--KMADKALSFFEKMDQL 161
>ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
gi|449518825|ref|XP_004166436.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
Length = 474
Score = 93.2 bits (230), Expect = 3e-17
Identities = 46/94 (48%), Positives = 67/94 (71%)
Frame = +2
Query: 8 VKELRRYQRHAHALELMEWMVNNKNTKMTYINHAMQLGLIAKVRGIEAAEKYFSDLPVQA 187
+KELR+Y+R+ H L++MEWM K ++ ++A++L LI+KV G+ AAEKYF DLP A
Sbjct: 48 IKELRKYRRYHHCLQIMEWMETRK-INYSFTDYALRLDLISKVNGVTAAEKYFYDLPPSA 106
Query: 188 KNKHTYGALLSSYCSEKNKNADKAFSLYNEMKML 289
KN+ TYGALL+ YC E + +KA +L+ +M L
Sbjct: 107 KNRCTYGALLNCYCKEMME--EKALTLFKKMDEL 138
>ref|XP_006644106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Oryza brachyantha]
Length = 412
Score = 92.0 bits (227), Expect = 7e-17
Identities = 46/78 (58%), Positives = 56/78 (71%)
Frame = +2
Query: 56 MEWMVNNKNTKMTYINHAMQLGLIAKVRGIEAAEKYFSDLPVQAKNKHTYGALLSSYCSE 235
M+WMVN K M+Y NHA++L LI KV GIEAAEKYF+DLP AKN TYGALL+ YCS
Sbjct: 1 MDWMVNTKGMNMSYTNHAIRLDLIYKVHGIEAAEKYFADLPDPAKNHRTYGALLNCYCSA 60
Query: 236 KNKNADKAFSLYNEMKML 289
K + +KA +Y +M L
Sbjct: 61 KME--EKAMDVYRKMDEL 76
>gb|ACU24296.1| unknown [Glycine max]
Length = 484
Score = 91.3 bits (225), Expect = 1e-16
Identities = 46/96 (47%), Positives = 67/96 (69%)
Frame = +2
Query: 2 RYVKELRRYQRHAHALELMEWMVNNKNTKMTYINHAMQLGLIAKVRGIEAAEKYFSDLPV 181
R V++LR+Y+R HALE++EWM K ++ N+A+QL L++K +G++AAE +F LP
Sbjct: 65 RCVEQLRKYRRFQHALEIIEWMEIRK-VNFSWSNYAVQLDLVSKTKGVDAAENFFGGLPP 123
Query: 182 QAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKML 289
AKN++TYGALL+ YC E K DKA S ++ M L
Sbjct: 124 PAKNRYTYGALLNCYCKELMK--DKALSHFDTMDEL 157
>gb|ESW17131.1| hypothetical protein PHAVU_007G213200g [Phaseolus vulgaris]
Length = 476
Score = 90.5 bits (223), Expect = 2e-16
Identities = 47/96 (48%), Positives = 67/96 (69%)
Frame = +2
Query: 2 RYVKELRRYQRHAHALELMEWMVNNKNTKMTYINHAMQLGLIAKVRGIEAAEKYFSDLPV 181
R V++LRRY++ HALE++EWM K ++ N+A+QL L++K +G+ AE +FS LP
Sbjct: 65 RCVEQLRRYRKFQHALEIIEWMEMRK-INFSWNNYAVQLDLVSKTKGVVEAENFFSGLPD 123
Query: 182 QAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKML 289
AKNK+TYGALL+ YC E K DKA S +++M L
Sbjct: 124 PAKNKYTYGALLNCYCKELMK--DKALSHFHKMDEL 157
>ref|XP_004288536.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 446
Score = 90.5 bits (223), Expect = 2e-16
Identities = 50/97 (51%), Positives = 67/97 (69%)
Frame = +2
Query: 2 RYVKELRRYQRHAHALELMEWMVNNKNTKMTYINHAMQLGLIAKVRGIEAAEKYFSDLPV 181
R VKELR+Y++ ALE+MEWM K + ++A++L L AK +GIEAAE YFS+LP
Sbjct: 13 RCVKELRKYRQFQTALEIMEWMEFRK-INYSLPDYAVRLDLTAKAKGIEAAESYFSNLPQ 71
Query: 182 QAKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKMLN 292
AKNK TYG+LL+ YC E + +KA +LY +M LN
Sbjct: 72 SAKNKLTYGSLLNCYCKEVME--EKALALYKKMDELN 106
>ref|XP_004229380.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Solanum lycopersicum]
Length = 495
Score = 90.5 bits (223), Expect = 2e-16
Identities = 46/94 (48%), Positives = 63/94 (67%)
Frame = +2
Query: 8 VKELRRYQRHAHALELMEWMVNNKNTKMTYINHAMQLGLIAKVRGIEAAEKYFSDLPVQA 187
+KELR+Y+R+ HALE+MEWM + +Y ++ ++L LIAKV+GI AAEKYF L
Sbjct: 71 IKELRKYKRYQHALEIMEWM-EKRGINFSYGDYGVRLDLIAKVQGITAAEKYFGSLSPSM 129
Query: 188 KNKHTYGALLSSYCSEKNKNADKAFSLYNEMKML 289
+N+ TYGALL+ YC E K DKA + + M L
Sbjct: 130 QNQSTYGALLNCYCVE--KMTDKALTFFERMDQL 161
>gb|EEC70480.1| hypothetical protein OsI_01546 [Oryza sativa Indica Group]
Length = 484
Score = 90.5 bits (223), Expect = 2e-16
Identities = 47/95 (49%), Positives = 64/95 (67%), Gaps = 2/95 (2%)
Frame = +2
Query: 11 KELRRYQRHAHALELMEWMVNNKNTKMTYINHAMQLGLIAKVRGIEAAEKYFSDLP--VQ 184
++L + +R AHALELM+WMVN K MTY +A+ L L+ V GIEAAE+YFS +P +
Sbjct: 88 RDLHKVKRDAHALELMDWMVNTKGMSMTYARYALHLELLYSVYGIEAAEEYFSGIPSFTR 147
Query: 185 AKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKML 289
+N TYGALL+ YCS K + +KA ++Y M L
Sbjct: 148 DQNHRTYGALLNCYCSAKME--EKATNIYRRMDEL 180
>ref|NP_001042823.1| Os01g0301500 [Oryza sativa Japonica Group]
gi|57899055|dbj|BAD87829.1| putative DNA-binding protein
[Oryza sativa Japonica Group]
gi|113532354|dbj|BAF04737.1| Os01g0301500 [Oryza sativa
Japonica Group] gi|222618277|gb|EEE54409.1| hypothetical
protein OsJ_01440 [Oryza sativa Japonica Group]
Length = 484
Score = 90.5 bits (223), Expect = 2e-16
Identities = 47/95 (49%), Positives = 64/95 (67%), Gaps = 2/95 (2%)
Frame = +2
Query: 11 KELRRYQRHAHALELMEWMVNNKNTKMTYINHAMQLGLIAKVRGIEAAEKYFSDLP--VQ 184
++L + +R AHALELM+WMVN K MTY +A+ L L+ V GIEAAE+YFS +P +
Sbjct: 88 RDLHKVKRDAHALELMDWMVNTKGMSMTYARYALHLELLYSVYGIEAAEEYFSGIPSFTR 147
Query: 185 AKNKHTYGALLSSYCSEKNKNADKAFSLYNEMKML 289
+N TYGALL+ YCS K + +KA ++Y M L
Sbjct: 148 DQNHRTYGALLNCYCSAKME--EKATNIYRRMDEL 180
>ref|XP_004495896.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cicer arietinum]
Length = 481
Score = 88.2 bits (217), Expect = 1e-15
Identities = 46/94 (48%), Positives = 64/94 (68%)
Frame = +2
Query: 8 VKELRRYQRHAHALELMEWMVNNKNTKMTYINHAMQLGLIAKVRGIEAAEKYFSDLPVQA 187
V+ELR+Y+R HA E+MEWMV K ++ N+A+QL L++KV+G+ AE YF+ L A
Sbjct: 70 VQELRKYRRFQHAFEIMEWMVMRK-INFSWNNYAVQLDLVSKVKGLIEAENYFNSLSSPA 128
Query: 188 KNKHTYGALLSSYCSEKNKNADKAFSLYNEMKML 289
KNK+TYG+LL+ YC K DKA + +N M L
Sbjct: 129 KNKYTYGSLLNCYC--KELMLDKALAHFNTMDEL 160
>ref|XP_002515265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545745|gb|EEF47249.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 504
Score = 88.2 bits (217), Expect = 1e-15
Identities = 48/94 (51%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
Frame = +2
Query: 2 RYVKELRRYQRHAHALELMEWMVNNKNTKMTYINHAMQLGLIAKVRGIEAAEKYFSDLPV 181
R ++ELR+Y+R HA E+MEWM K +Y + A++L LI K RGI AAE YF+ L
Sbjct: 75 RCIRELRKYRRFDHAFEIMEWMEKRK-MNFSYADRAIRLDLIGKARGIAAAEDYFNGLSP 133
Query: 182 QAKNKHT-YGALLSSYCSEKNKNADKAFSLYNEM 280
AKN HT YGALL+ YC K +DKA +L+ EM
Sbjct: 134 SAKNHHTSYGALLNCYC--KELMSDKALALFQEM 165