BLASTX nr result

ID: Zingiber23_contig00009191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00009191
         (1572 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004972798.1| PREDICTED: protein LHY-like isoform X1 [Seta...   194   1e-46
gb|AFW61192.1| putative MYB DNA-binding domain superfamily prote...   193   1e-46
ref|XP_002443890.1| hypothetical protein SORBIDRAFT_07g003870 [S...   193   1e-46
gb|ADU60099.1| circadian clock associated protein 1 [Zea mays]        191   7e-46
ref|NP_001147482.1| LHY protein [Zea mays] gi|195611664|gb|ACG27...   191   7e-46
gb|AFW57284.1| LHY protein [Zea mays]                                 191   1e-45
dbj|BAC99516.1| putative LHY protein [Oryza sativa Japonica Group]    189   2e-45
gb|ACF79969.1| unknown [Zea mays]                                     189   2e-45
ref|NP_001061032.1| Os08g0157600 [Oryza sativa Japonica Group] g...   189   2e-45
gb|EEC82927.1| hypothetical protein OsI_27882 [Oryza sativa Indi...   189   3e-45
ref|NP_001131529.2| LHY protein [Zea mays] gi|195609712|gb|ACG26...   188   5e-45
gb|EMS48518.1| hypothetical protein TRIUR3_13395 [Triticum urartu]    187   8e-45
ref|XP_002267720.1| PREDICTED: protein LHY-like [Vitis vinifera]      187   1e-44
ref|XP_006659144.1| PREDICTED: protein CCA1-like isoform X8 [Ory...   187   1e-44
ref|XP_006659137.1| PREDICTED: protein CCA1-like isoform X1 [Ory...   187   1e-44
emb|CAN81352.1| hypothetical protein VITISV_012722 [Vitis vinifera]   187   1e-44
gb|EMT23918.1| hypothetical protein F775_26023 [Aegilops tauschii]    186   3e-44
ref|XP_003573469.1| PREDICTED: protein LHY-like [Brachypodium di...   186   3e-44
gb|ACN25207.1| unknown [Zea mays]                                     185   4e-44
dbj|BAH09383.1| transcription factor LHY [Populus nigra] gi|2196...   178   7e-42

>ref|XP_004972798.1| PREDICTED: protein LHY-like isoform X1 [Setaria italica]
            gi|514793380|ref|XP_004972799.1| PREDICTED: protein
            LHY-like isoform X2 [Setaria italica]
          Length = 747

 Score =  194 bits (492), Expect = 1e-46
 Identities = 148/431 (34%), Positives = 202/431 (46%), Gaps = 16/431 (3%)
 Frame = +1

Query: 106  SSNPAVSAMQFQNPPSIGSVH-QPFP----VCSPLSYFHSNQDAYRXXXXXXXXXXXXXX 270
            S NP +  M   +P    S   QPFP      +P+   + NQD YR              
Sbjct: 331  SMNPCIHPMLSTDPKFDSSATPQPFPHNYAAFAPMMQCNCNQDTYRSFVNMSSTFSSMLV 390

Query: 271  XXXXQNPXXXXXXXXXXSLWPSSEAETPVQPTAEISTGEILEKREKSXXXXXXXXXXXXX 450
                 NP          S WP++E  TPV PT E     +  +   S             
Sbjct: 391  STLLSNPAIHAAARLAASYWPAAEGNTPVDPTQENPAEGVQGRNLGSPPSMASIVAATVA 450

Query: 451  XXXXXXXXXGXXXXXXXXXXXXXXXXXXXXMGPSADPTRTQV---FDGTERKPSEAGQQV 621
                     G                      PSA  T   V    D     P E  Q+ 
Sbjct: 451  AASAWWATQGLLPFFTPPMAFPFVP------APSAAFTTADVPRPLDKDRDSPVENAQKG 504

Query: 622  PSENQFDSLKPMHHSSKPLSPSDSDASGKGQNSDKQAARSNKIK-----PDSGLQDSEKA 786
              E Q         + +    S+SD + KG  S     + + ++     P +G   S+  
Sbjct: 505  CQEAQKQG---QSEALRVAVSSESDGTRKGDMSLHTELKISPVQNTDAAPTTGADISDAF 561

Query: 787  KDKKIQDRSSCGSNTPSSSEVETDTIEKTHDEKVNNESKESLFSNFSAWEINHRRLRNCG 966
            ++KK QDRSSCGSNTPSSS+VE   + +  D K N+++K++  SN SA + NHR+ R+ G
Sbjct: 562  RNKKKQDRSSCGSNTPSSSDVEAGNVPEKED-KANDKAKQASCSNSSAGDTNHRKFRSSG 620

Query: 967  SMNESWKEVSEEGRLAFQALFKREVLPQSFSPPLSDEAAAMLNK---GFTELPADVDKNM 1137
            S ++SWKEVSEEGR+AF ALF RE LPQSFSPP ++E+  +  +     T +  D++KN 
Sbjct: 621  STSDSWKEVSEEGRMAFDALFSREKLPQSFSPPQAEESKEVAKEEEDEVTTVTVDLNKN- 679

Query: 1138 CTTINLNSLCNNAENKSVVRNNDTTVSAKLKIRRTGFKPYKRCSIEAKDNRSSAVEENGN 1317
             TTI+ + L    E ++   N  + +  KLK R+TGFKPYKRCS+EAK+NR  A +E G 
Sbjct: 680  ATTID-HDLDMMDEPRTSFPNELSHL--KLKSRKTGFKPYKRCSVEAKENRVPASDEVGT 736

Query: 1318 KRIRLHEEAST 1350
            KRIRL  E ST
Sbjct: 737  KRIRLESEEST 747


>gb|AFW61192.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
          Length = 720

 Score =  193 bits (491), Expect = 1e-46
 Identities = 146/433 (33%), Positives = 199/433 (45%), Gaps = 18/433 (4%)
 Frame = +1

Query: 106  SSNPAVSAMQFQNPP-SIGSVHQPFP----VCSPLSYFHSNQDAYRXXXXXXXXXXXXXX 270
            S NP +  M   +P     +  Q FP      +P+   + NQD YR              
Sbjct: 304  SMNPCIHPMVSADPKFGSSATPQTFPHNYAAFAPMMQCNCNQDTYRSFTNMSSTFSSMLV 363

Query: 271  XXXXQNPXXXXXXXXXXSLWPSSEAETPVQPTAEISTGEILEKREKSXXXXXXXXXXXXX 450
                 NP          S WP++E  TP+ P  E     +  +   S             
Sbjct: 364  STLLSNPAIHAAARLAASYWPAAEGNTPIDPNQENPADGVQGRNIGSPPSMVSIVAATVA 423

Query: 451  XXXXXXXXXGXXXXXXXXXXXXXXXXXXXXMGPSADPTRTQVFDGTERKPSEAGQQVPSE 630
                     G                      P+ D  R          PSE  +  P+E
Sbjct: 424  AASAWWATQGLLPFFAPPVAFPFVPAPSAAF-PTVDVPR----------PSEKDRDCPAE 472

Query: 631  N-----QFDSLKPMHHSSKPLSPSDSDASGKGQNS-----DKQAARSNKIKPDSGLQDSE 780
            N     Q    +      +  + S+SD SGKG+ S         A++    P +G   ++
Sbjct: 473  NAQIECQEARKQVQFEGLRIAASSESDGSGKGEVSLHTELKLSPAQNADATPTTGAGTND 532

Query: 781  KAKDKKIQDRSSCGSNTPSSSEVETDTIEKTHDEKVNNESKESLFSNFSAWEINHRRLRN 960
              ++KK QDRSSCGSNTPSSS+V+   + +  ++  N ++K++  SN SA + NHRR R+
Sbjct: 533  AFRNKKKQDRSSCGSNTPSSSDVDAGNVPE--EDNANEKAKQASCSNSSAGDTNHRRFRS 590

Query: 961  CGSMNESWKEVSEEGRLAFQALFKREVLPQSFSPPL---SDEAAAMLNKGFTELPADVDK 1131
             GS ++SWKEVSEEGRLAF ALF RE LPQSFSPP    S E A       T +  D++K
Sbjct: 591  NGSTSDSWKEVSEEGRLAFDALFSREKLPQSFSPPQAVDSKEVAKEEEDEVTTVAVDLNK 650

Query: 1132 NMCTTINLNSLCNNAENKSVVRNNDTTVSAKLKIRRTGFKPYKRCSIEAKDNRSSAVEEN 1311
            N  T+I+ + L    E ++   N  + +  KLK RRTGFKPYKRCS+EAK+NR  A +  
Sbjct: 651  N-ATSIDHDDLDTMDEPRASFPNELSHL--KLKSRRTGFKPYKRCSVEAKENRVPASDMV 707

Query: 1312 GNKRIRLHEEAST 1350
            G KRIRL  EAST
Sbjct: 708  GTKRIRLDSEAST 720


>ref|XP_002443890.1| hypothetical protein SORBIDRAFT_07g003870 [Sorghum bicolor]
            gi|241940240|gb|EES13385.1| hypothetical protein
            SORBIDRAFT_07g003870 [Sorghum bicolor]
          Length = 747

 Score =  193 bits (491), Expect = 1e-46
 Identities = 151/448 (33%), Positives = 204/448 (45%), Gaps = 16/448 (3%)
 Frame = +1

Query: 55   TEDPDAQNPAAVMNTKPSSNPAVSAMQFQNPPSIGSVH-QPFP----VCSPLSYFHSNQD 219
            TE   +   +  +    S NP +  M   +P    S   Q FP      +P+   + NQD
Sbjct: 314  TEGTHSDQTSDQVGINGSINPCIHPMLSSDPKFDSSATPQHFPHNYAAFAPMMQGNCNQD 373

Query: 220  AYRXXXXXXXXXXXXXXXXXXQNPXXXXXXXXXXSLWPSSEAETPVQPTAEISTGEILEK 399
             YR                   NP          S WP++E  T + P  E    ++  +
Sbjct: 374  TYRSFVNMSSTFSSMLVSTLLSNPAIHAAARLAASYWPAAEGNTLIDPNQENPADDVQGR 433

Query: 400  REKSXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXXXXXXXMGPSADPTRTQVF 579
               S                      G                      P+ D  R    
Sbjct: 434  NIGSPPSMASIVAATVAAASAWWATQGLLPFFTPPMAFPFVPAPSAAF-PTVDVPRPSEK 492

Query: 580  DG---TERKPSEAGQQVPSENQFDSLKPMHHSSKPLSPSDSDASGKGQNSDKQAARSNKI 750
            D     E    E  Q+   + QF+ L+         + S SD SGKG+ S     + + +
Sbjct: 493  DRDFPVENAQKEC-QEAQKQGQFEGLRVA-------ASSVSDGSGKGEVSLHTELKISPV 544

Query: 751  K-----PDSGLQDSEKAKDKKIQDRSSCGSNTPSSSEVETDTIEKTHDEKVNNESKESLF 915
            +     P +G   S+  ++KK QDRSSCGSNTPSSS+V+ D + +  D   N + K++  
Sbjct: 545  QNADATPTTGADTSDAFRNKKKQDRSSCGSNTPSSSDVDADNVPEKEDN-ANEKVKQASC 603

Query: 916  SNFSAWEINHRRLRNCGSMNESWKEVSEEGRLAFQALFKREVLPQSFSPPL---SDEAAA 1086
            SN SA + NHRR R+ GS ++SWKEVSEEGRLAF ALF RE LPQSFSPP    S E A 
Sbjct: 604  SNSSAGDTNHRRFRSSGSTSDSWKEVSEEGRLAFDALFSREKLPQSFSPPQAEDSKEVAK 663

Query: 1087 MLNKGFTELPADVDKNMCTTINLNSLCNNAENKSVVRNNDTTVSAKLKIRRTGFKPYKRC 1266
                  T +  D++KN  T+I+ + L    E ++   N  + +  KLK RRTGFKPYKRC
Sbjct: 664  EEENEVTTVAVDLNKN-ATSID-HDLDTMDEPRASFPNELSHL--KLKSRRTGFKPYKRC 719

Query: 1267 SIEAKDNRSSAVEENGNKRIRLHEEAST 1350
            S+EAK+NR  A +E G KRIRL  EAST
Sbjct: 720  SVEAKENRVPASDEVGTKRIRLESEAST 747


>gb|ADU60099.1| circadian clock associated protein 1 [Zea mays]
          Length = 720

 Score =  191 bits (485), Expect = 7e-46
 Identities = 144/433 (33%), Positives = 197/433 (45%), Gaps = 18/433 (4%)
 Frame = +1

Query: 106  SSNPAVSAMQFQNPP-SIGSVHQPFP----VCSPLSYFHSNQDAYRXXXXXXXXXXXXXX 270
            S NP +  M   +P     +  Q FP      +P+   + NQD YR              
Sbjct: 304  SMNPCIHPMVSADPKFGSSATPQTFPHNYAAFAPMMQCNCNQDTYRSFTNMSSTFSSMLV 363

Query: 271  XXXXQNPXXXXXXXXXXSLWPSSEAETPVQPTAEISTGEILEKREKSXXXXXXXXXXXXX 450
                 NP          S WP++E  TP+ P  E     +  +   S             
Sbjct: 364  STLLSNPAIHAAARLAASYWPAAEGNTPIDPNQENPADGVQGRNIGSPPSMASIVAATVA 423

Query: 451  XXXXXXXXXGXXXXXXXXXXXXXXXXXXXXMGPSADPTRTQVFDGTERKPSEAGQQVPSE 630
                     G                      P+ D  R          PSE  +  P E
Sbjct: 424  AASAWWATQGLLPLFAPPVAFPFVPAPSAAF-PTVDVPR----------PSEKDRDCPVE 472

Query: 631  NQFDSLKPMH-----HSSKPLSPSDSDASGKGQNS-----DKQAARSNKIKPDSGLQDSE 780
            N  +  +           +  + S+SD SGKG+ S         A++    P +G   ++
Sbjct: 473  NAQNECQEARKQVQFEGLRVAASSESDGSGKGEVSLHTELKLSPAQNADATPTTGAGTND 532

Query: 781  KAKDKKIQDRSSCGSNTPSSSEVETDTIEKTHDEKVNNESKESLFSNFSAWEINHRRLRN 960
              ++KK QDRSSCGSNTPSSS+V+   + +  ++  N ++K++  SN SA + NHRR R+
Sbjct: 533  AFRNKKKQDRSSCGSNTPSSSDVDAGNVPE--EDNANEKAKQASCSNSSAGDTNHRRFRS 590

Query: 961  CGSMNESWKEVSEEGRLAFQALFKREVLPQSFSPPL---SDEAAAMLNKGFTELPADVDK 1131
             GS ++SWKEVSEEGRLAF ALF RE LPQSFSPP    S E A       T +  D++K
Sbjct: 591  NGSTSDSWKEVSEEGRLAFDALFSREKLPQSFSPPQAVDSKEVAKEEEDEVTTVAVDLNK 650

Query: 1132 NMCTTINLNSLCNNAENKSVVRNNDTTVSAKLKIRRTGFKPYKRCSIEAKDNRSSAVEEN 1311
            N  T+I+ + L    E ++   N  + +  KLK RRTGFKPYKRCS+EAK+NR    +  
Sbjct: 651  N-ATSIDHDDLDTMDEPRASFPNELSHL--KLKSRRTGFKPYKRCSVEAKENRVPTSDMV 707

Query: 1312 GNKRIRLHEEAST 1350
            G KRIRL  EAST
Sbjct: 708  GTKRIRLDSEAST 720


>ref|NP_001147482.1| LHY protein [Zea mays] gi|195611664|gb|ACG27662.1| LHY protein [Zea
            mays]
          Length = 720

 Score =  191 bits (485), Expect = 7e-46
 Identities = 144/433 (33%), Positives = 197/433 (45%), Gaps = 18/433 (4%)
 Frame = +1

Query: 106  SSNPAVSAMQFQNPP-SIGSVHQPFP----VCSPLSYFHSNQDAYRXXXXXXXXXXXXXX 270
            S NP +  M   +P     +  Q FP      +P+   + NQD YR              
Sbjct: 304  SMNPCIHPMVSADPKFGSSATPQTFPHNYAAFAPMMQCNCNQDTYRSFTNMSSTFSSMLV 363

Query: 271  XXXXQNPXXXXXXXXXXSLWPSSEAETPVQPTAEISTGEILEKREKSXXXXXXXXXXXXX 450
                 NP          S WP++E  TP+ P  E     +  +   S             
Sbjct: 364  STLLSNPAIHAAARLAASYWPAAEGNTPIDPNQENPADGVQGRNIGSPPSMASIVAATVA 423

Query: 451  XXXXXXXXXGXXXXXXXXXXXXXXXXXXXXMGPSADPTRTQVFDGTERKPSEAGQQVPSE 630
                     G                      P+ D  R          PSE  +  P E
Sbjct: 424  AASAWWATQGLLPFFAPPVAFPFVPAPSAAF-PTVDVPR----------PSEKDRDCPVE 472

Query: 631  NQFDSLKPMH-----HSSKPLSPSDSDASGKGQNS-----DKQAARSNKIKPDSGLQDSE 780
            N  +  +           +  + S+SD SGKG+ S         A++    P +G   ++
Sbjct: 473  NAQNECQEARKQVQFEGLRVAASSESDGSGKGEVSLHTELKLSPAQNADATPTTGAGTND 532

Query: 781  KAKDKKIQDRSSCGSNTPSSSEVETDTIEKTHDEKVNNESKESLFSNFSAWEINHRRLRN 960
              ++KK QDRSSCGSNTPSSS+V+   + +  ++  N ++K++  SN SA + NHRR R+
Sbjct: 533  AFRNKKKQDRSSCGSNTPSSSDVDAGNVPE--EDNANEKAKQASCSNSSAGDTNHRRFRS 590

Query: 961  CGSMNESWKEVSEEGRLAFQALFKREVLPQSFSPPL---SDEAAAMLNKGFTELPADVDK 1131
             GS ++SWKEVSEEGRLAF ALF RE LPQSFSPP    S E A       T +  D++K
Sbjct: 591  NGSTSDSWKEVSEEGRLAFDALFSREKLPQSFSPPQAVDSKEVAKEEEDEVTTVAVDLNK 650

Query: 1132 NMCTTINLNSLCNNAENKSVVRNNDTTVSAKLKIRRTGFKPYKRCSIEAKDNRSSAVEEN 1311
            N  T+I+ + L    E ++   N  + +  KLK RRTGFKPYKRCS+EAK+NR    +  
Sbjct: 651  N-ATSIDHDDLDTMDEPRASFPNELSHL--KLKSRRTGFKPYKRCSVEAKENRVPTSDMV 707

Query: 1312 GNKRIRLHEEAST 1350
            G KRIRL  EAST
Sbjct: 708  GTKRIRLDSEAST 720


>gb|AFW57284.1| LHY protein [Zea mays]
          Length = 689

 Score =  191 bits (484), Expect = 1e-45
 Identities = 145/433 (33%), Positives = 201/433 (46%), Gaps = 18/433 (4%)
 Frame = +1

Query: 106  SSNPAVSAMQFQNPPSIGS--VHQPFP----VCSPLSYFHSNQDAYRXXXXXXXXXXXXX 267
            S NP++  M F   P   S    QPFP      +P+   + NQD +R             
Sbjct: 273  SMNPSIHPM-FPADPKFDSSATPQPFPHNYAAFAPMMQCNCNQDTHRSLVNMSSTFSSML 331

Query: 268  XXXXXQNPXXXXXXXXXXSLWPSSEAETPVQPTAEISTGEILEKREKSXXXXXXXXXXXX 447
                  NP          S WP++E  TP+ P  E     +  +   S            
Sbjct: 332  VSTLLSNPAIHAAARLAASYWPAAEGNTPIDPNQENLADGVQGRSIGSPPSMASIVAATV 391

Query: 448  XXXXXXXXXXGXXXXXXXXXXXXXXXXXXXXMGPSADPTRTQVFDGTE-RKPSEAGQQVP 624
                      G                    M  S  P  +  F   +  +PSE  +  P
Sbjct: 392  AAASAWWATQGLLPFFAPP------------MAFSFVPAPSAAFPTVDVPRPSEKDRDCP 439

Query: 625  SEN-----QFDSLKPMHHSSKPLSPSDSDASGKGQNSDKQAARSNKIK-----PDSGLQD 774
            +EN     Q    +      +  + S+ D SGKG+ S     + + ++       +G   
Sbjct: 440  AENAQKECQEARKQGQFEGFRVAASSEYDGSGKGEVSVHTELKISPVQNADATSAAGADT 499

Query: 775  SEKAKDKKIQDRSSCGSNTPSSSEVETDTIEKTHDEKVNNESKESLFSNFSAWEINHRRL 954
            ++   +KK QDRSSCGSNTPSSS+V+ D + +      N ++K++  SN SA + NHRR 
Sbjct: 500  TDAFMNKKKQDRSSCGSNTPSSSDVDVDNVPEKEGNG-NEKAKQASCSNSSAGDTNHRRF 558

Query: 955  RNCGSMNESWKEVSEEGRLAFQALFKREVLPQSFSPPLSDEAAAMLNKGFTEL-PADVDK 1131
            R+ GS ++SWKEVSEEGRLAF ALF RE LPQSFSPP ++ +  +  +   E+    VD 
Sbjct: 559  RSSGSTSDSWKEVSEEGRLAFHALFSREKLPQSFSPPQAEGSKEVGKEEEDEVTTVAVDL 618

Query: 1132 NMCTTINLNSLCNNAENKSVVRNNDTTVSAKLKIRRTGFKPYKRCSIEAKDNRSSAVEEN 1311
            N  TT   + L    E ++   N  + +  KLK+RRTGFKPYKRCS+EAK+NR  A +E 
Sbjct: 619  NKSTTSIDHDLDTIGEPRASFPNELSPL--KLKLRRTGFKPYKRCSVEAKENRVPASDEV 676

Query: 1312 GNKRIRLHEEAST 1350
            G KRIRL  EAST
Sbjct: 677  GTKRIRLDSEAST 689


>dbj|BAC99516.1| putative LHY protein [Oryza sativa Japonica Group]
          Length = 725

 Score =  189 bits (481), Expect = 2e-45
 Identities = 141/406 (34%), Positives = 196/406 (48%), Gaps = 12/406 (2%)
 Frame = +1

Query: 169  QPFP----VCSPLSYFHSNQDAYRXXXXXXXXXXXXXXXXXXQNPXXXXXXXXXXSLWPS 336
            QPFP      +P+   H NQDAYR                   NP          S WP+
Sbjct: 332  QPFPHNYAAFAPMMQCHCNQDAYRSFANMSSTFSSMLVSTLLSNPAIHAAARLAASYWPT 391

Query: 337  SEAETPVQPTAEISTGEILEKREKSXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXX 516
             +  TP  P  E  +         S                      G            
Sbjct: 392  VDGNTP-DPNQENLSESAQGSHAGSPPNMASIVTATVAAASAWWATQGLLPLFPPPIAFP 450

Query: 517  XXXXXXXXMGPSADPTRTQVFDGTERKPSEAGQQVPSENQFDSLKPMHHSSKPLSPSDSD 696
                       +AD  R Q  D  +     A +++    + D+ + M    K +  S++D
Sbjct: 451  FVPAPSAPFS-TADVQRAQEKD-IDCPMDNAQKELQETRKQDNFEAM----KVIVSSETD 504

Query: 697  ASGKGQ---NSDKQAARSNKI--KPDSGLQDSEKAKDKKIQDRSSCGSNTPSSSEVETDT 861
             SGKG+   +++ + + ++K   KP +G + S+   +KK QDRSSCGSNTPSSS++E D 
Sbjct: 505  ESGKGEVSLHTELKISPADKADTKPAAGAETSDVFGNKKKQDRSSCGSNTPSSSDIEADN 564

Query: 862  IEKTHDEKVNNESKESLFSNFSAWEINHRRLRNCGSMNESWKEVSEEGRLAFQALFKREV 1041
              + + EK N+++K++  SN SA + NHRR R+  S ++SWKEVSEEGRLAF ALF RE 
Sbjct: 565  APE-NQEKANDKAKQASCSNSSAGDNNHRRFRSSASTSDSWKEVSEEGRLAFDALFSRER 623

Query: 1042 LPQSFSPPL---SDEAAAMLNKGFTELPADVDKNMCTTINLNSLCNNAENKSVVRNNDTT 1212
            LPQSFSPP    S E +       T +  D++KN      ++   + A+       N+ +
Sbjct: 624  LPQSFSPPQVEGSKEISKEEEDEVTTVTVDLNKNAAI---IDQELDTADEPRASFPNELS 680

Query: 1213 VSAKLKIRRTGFKPYKRCSIEAKDNRSSAVEENGNKRIRLHEEAST 1350
             + KLK RRTGFKPYKRCS+EAK+NR  A +E G KRIRL  EAST
Sbjct: 681  -NLKLKSRRTGFKPYKRCSVEAKENRVPASDEVGTKRIRLESEAST 725


>gb|ACF79969.1| unknown [Zea mays]
          Length = 416

 Score =  189 bits (481), Expect = 2e-45
 Identities = 144/431 (33%), Positives = 200/431 (46%), Gaps = 18/431 (4%)
 Frame = +1

Query: 112  NPAVSAMQFQNPPSIGS--VHQPFP----VCSPLSYFHSNQDAYRXXXXXXXXXXXXXXX 273
            NP++  M F   P   S    QPFP      +P+   + NQD +R               
Sbjct: 2    NPSIHPM-FPADPKFDSSATPQPFPHNYAAFAPMMQCNCNQDTHRSLVNMSSTFSSMLVS 60

Query: 274  XXXQNPXXXXXXXXXXSLWPSSEAETPVQPTAEISTGEILEKREKSXXXXXXXXXXXXXX 453
                NP          S WP++E  TP+ P  E     +  +   S              
Sbjct: 61   TLLSNPAIHAAARLAASYWPAAEGNTPIDPNQENLADGVQGRSIGSPPSMASIVAATVAA 120

Query: 454  XXXXXXXXGXXXXXXXXXXXXXXXXXXXXMGPSADPTRTQVFDGTE-RKPSEAGQQVPSE 630
                    G                    M  S  P  +  F   +  +PSE  +  P+E
Sbjct: 121  ASAWWATQGLLPFFAPP------------MAFSFVPAPSAAFPTVDVPRPSEKDRDCPAE 168

Query: 631  N-----QFDSLKPMHHSSKPLSPSDSDASGKGQNSDKQAARSNKIK-----PDSGLQDSE 780
            N     Q    +      +  + S+ D SGKG+ S     + + ++       +G   ++
Sbjct: 169  NAQKECQEARKQGQFEGFRVAASSEYDGSGKGEVSVHTELKISPVQNADATSAAGADTTD 228

Query: 781  KAKDKKIQDRSSCGSNTPSSSEVETDTIEKTHDEKVNNESKESLFSNFSAWEINHRRLRN 960
               +KK QDRSSCGSNTPSSS+V+ D + +      N ++K++  SN SA + NHRR R+
Sbjct: 229  AFMNKKKQDRSSCGSNTPSSSDVDVDNVPEKEGNG-NEKAKQASCSNSSAGDTNHRRFRS 287

Query: 961  CGSMNESWKEVSEEGRLAFQALFKREVLPQSFSPPLSDEAAAMLNKGFTEL-PADVDKNM 1137
             GS ++SWKEVSEEGRLAF ALF RE LPQSFSPP ++ +  +  +   E+    VD N 
Sbjct: 288  SGSTSDSWKEVSEEGRLAFHALFSREKLPQSFSPPQAEGSKEVGKEEEDEVTTVAVDLNK 347

Query: 1138 CTTINLNSLCNNAENKSVVRNNDTTVSAKLKIRRTGFKPYKRCSIEAKDNRSSAVEENGN 1317
             TT   + L    E ++   N  + +  KLK+RRTGFKPYKRCS+EAK+NR  A +E G 
Sbjct: 348  STTSIDHDLDTIGEPRASFPNELSPL--KLKLRRTGFKPYKRCSVEAKENRVPASDEVGT 405

Query: 1318 KRIRLHEEAST 1350
            KRIRL  EAST
Sbjct: 406  KRIRLDSEAST 416


>ref|NP_001061032.1| Os08g0157600 [Oryza sativa Japonica Group]
            gi|113623001|dbj|BAF22946.1| Os08g0157600 [Oryza sativa
            Japonica Group] gi|222639944|gb|EEE68076.1| hypothetical
            protein OsJ_26106 [Oryza sativa Japonica Group]
          Length = 719

 Score =  189 bits (481), Expect = 2e-45
 Identities = 141/406 (34%), Positives = 196/406 (48%), Gaps = 12/406 (2%)
 Frame = +1

Query: 169  QPFP----VCSPLSYFHSNQDAYRXXXXXXXXXXXXXXXXXXQNPXXXXXXXXXXSLWPS 336
            QPFP      +P+   H NQDAYR                   NP          S WP+
Sbjct: 326  QPFPHNYAAFAPMMQCHCNQDAYRSFANMSSTFSSMLVSTLLSNPAIHAAARLAASYWPT 385

Query: 337  SEAETPVQPTAEISTGEILEKREKSXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXX 516
             +  TP  P  E  +         S                      G            
Sbjct: 386  VDGNTP-DPNQENLSESAQGSHAGSPPNMASIVTATVAAASAWWATQGLLPLFPPPIAFP 444

Query: 517  XXXXXXXXMGPSADPTRTQVFDGTERKPSEAGQQVPSENQFDSLKPMHHSSKPLSPSDSD 696
                       +AD  R Q  D  +     A +++    + D+ + M    K +  S++D
Sbjct: 445  FVPAPSAPFS-TADVQRAQEKD-IDCPMDNAQKELQETRKQDNFEAM----KVIVSSETD 498

Query: 697  ASGKGQ---NSDKQAARSNKI--KPDSGLQDSEKAKDKKIQDRSSCGSNTPSSSEVETDT 861
             SGKG+   +++ + + ++K   KP +G + S+   +KK QDRSSCGSNTPSSS++E D 
Sbjct: 499  ESGKGEVSLHTELKISPADKADTKPAAGAETSDVFGNKKKQDRSSCGSNTPSSSDIEADN 558

Query: 862  IEKTHDEKVNNESKESLFSNFSAWEINHRRLRNCGSMNESWKEVSEEGRLAFQALFKREV 1041
              + + EK N+++K++  SN SA + NHRR R+  S ++SWKEVSEEGRLAF ALF RE 
Sbjct: 559  APE-NQEKANDKAKQASCSNSSAGDNNHRRFRSSASTSDSWKEVSEEGRLAFDALFSRER 617

Query: 1042 LPQSFSPPL---SDEAAAMLNKGFTELPADVDKNMCTTINLNSLCNNAENKSVVRNNDTT 1212
            LPQSFSPP    S E +       T +  D++KN      ++   + A+       N+ +
Sbjct: 618  LPQSFSPPQVEGSKEISKEEEDEVTTVTVDLNKNAAI---IDQELDTADEPRASFPNELS 674

Query: 1213 VSAKLKIRRTGFKPYKRCSIEAKDNRSSAVEENGNKRIRLHEEAST 1350
             + KLK RRTGFKPYKRCS+EAK+NR  A +E G KRIRL  EAST
Sbjct: 675  -NLKLKSRRTGFKPYKRCSVEAKENRVPASDEVGTKRIRLESEAST 719


>gb|EEC82927.1| hypothetical protein OsI_27882 [Oryza sativa Indica Group]
          Length = 719

 Score =  189 bits (480), Expect = 3e-45
 Identities = 144/406 (35%), Positives = 196/406 (48%), Gaps = 12/406 (2%)
 Frame = +1

Query: 169  QPFP----VCSPLSYFHSNQDAYRXXXXXXXXXXXXXXXXXXQNPXXXXXXXXXXSLWPS 336
            QPFP      +P+   H NQDAYR                   NP          S WP+
Sbjct: 326  QPFPHNYAAFAPMMQCHCNQDAYRSFANMSSTFSSMLVSTLLSNPAIHAAARLAASYWPT 385

Query: 337  SEAETPVQPTAEISTGEILEKREKSXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXX 516
             +  TP  P  E  +         S                      G            
Sbjct: 386  VDGNTP-DPNQENLSESAQGSHAGSPPNMASIVAATVAAASAWWATQGLLPLFPPPIAFP 444

Query: 517  XXXXXXXXMGPSADPTRTQVFDGTERKPSEAGQQVPSENQFDSLKPMHHSSKPLSPSDSD 696
                       +AD  R Q  D  +     A +++    + D+ + M    K +  S++D
Sbjct: 445  FVPAPSAPFS-TADVQRAQEKD-IDCPMDNAQKELQETRKQDNSEAM----KVIVSSETD 498

Query: 697  ASGKGQ---NSDKQAARSNKI--KPDSGLQDSEKAKDKKIQDRSSCGSNTPSSSEVETDT 861
             SGKG+   +++ + + ++K   KP +G + S+   +KK QDRSSCGSNTPSSS++E D 
Sbjct: 499  ESGKGEVSLHTELKISPADKADTKPAAGAETSDVFGNKKKQDRSSCGSNTPSSSDIEADN 558

Query: 862  IEKTHDEKVNNESKESLFSNFSAWEINHRRLRNCGSMNESWKEVSEEGRLAFQALFKREV 1041
              + + EK N+++K++  SN SA + NHRR R+  S ++SWKEVSEEGRLAF ALF RE 
Sbjct: 559  APE-NQEKANDKAKQASCSNSSAGDNNHRRFRSSASTSDSWKEVSEEGRLAFDALFSRER 617

Query: 1042 LPQSFSPPL---SDEAAAMLNKGFTELPADVDKNMCTTINLNSLCNNAENKSVVRNNDTT 1212
            LPQSFSPP    S E +       T +  D++KN   TI    L    E ++   N  + 
Sbjct: 618  LPQSFSPPQVEGSKEISKEEEDEVTTVTVDLNKN--ATIIDQELDTADEPRASFPNELSN 675

Query: 1213 VSAKLKIRRTGFKPYKRCSIEAKDNRSSAVEENGNKRIRLHEEAST 1350
            +  KLK RRTGFKPYKRCS+EAK+NR  A +E G KRIRL  EAST
Sbjct: 676  L--KLKSRRTGFKPYKRCSVEAKENRVPASDEVGTKRIRLESEAST 719


>ref|NP_001131529.2| LHY protein [Zea mays] gi|195609712|gb|ACG26686.1| LHY protein [Zea
            mays]
          Length = 718

 Score =  188 bits (478), Expect = 5e-45
 Identities = 143/433 (33%), Positives = 199/433 (45%), Gaps = 18/433 (4%)
 Frame = +1

Query: 106  SSNPAVSAMQFQNPPSIGS--VHQPFP----VCSPLSYFHSNQDAYRXXXXXXXXXXXXX 267
            S NP++  M F   P   S    QPFP      +P+   + NQD +R             
Sbjct: 302  SMNPSIHPM-FPADPKFDSSATPQPFPHNYAAFAPMMQCNCNQDTHRSLVNMSSTFSSML 360

Query: 268  XXXXXQNPXXXXXXXXXXSLWPSSEAETPVQPTAEISTGEILEKREKSXXXXXXXXXXXX 447
                  NP          S WP++E  TP+ P  E     +  +   S            
Sbjct: 361  VSTLLSNPAIHAAARLAASYWPAAEGNTPIDPNQENLADGVQGRSIGSPPSMASIVAATV 420

Query: 448  XXXXXXXXXXGXXXXXXXXXXXXXXXXXXXXMGPSADPTRTQVFDGTE-RKPSEAGQQVP 624
                      G                    M  S  P  +  F   +  +PSE  +  P
Sbjct: 421  AAASAWWATQGLLPFFAPP------------MAFSFVPAPSAAFPTVDVPRPSEKDRDCP 468

Query: 625  SENQFDSLKPMHHSS-----KPLSPSDSDASGKGQNSDKQAARSNKIK-----PDSGLQD 774
            +EN     +           +  + S+ D SGKG+ S     + + ++       +G   
Sbjct: 469  AENAQKECQEARKQGQLEGFRVTASSEYDGSGKGEVSVHTELKISPVQNADATSAAGADT 528

Query: 775  SEKAKDKKIQDRSSCGSNTPSSSEVETDTIEKTHDEKVNNESKESLFSNFSAWEINHRRL 954
            ++   +KK QDRSSCGSNTPSSS+V+ D + +  +   N ++K++  SN SA + NHRR 
Sbjct: 529  TDAFMNKKKQDRSSCGSNTPSSSDVDVDNVPEK-EGNANEKAKQASCSNSSAGDTNHRRF 587

Query: 955  RNCGSMNESWKEVSEEGRLAFQALFKREVLPQSFSPPLSDEAAAMLNKGFTEL-PADVDK 1131
            R+ GS ++SWKEVSEEGRL F ALF RE LPQSFSPP ++ +  +  K   E+    VD 
Sbjct: 588  RSSGSTSDSWKEVSEEGRLVFHALFSREKLPQSFSPPQAEGSKEVGKKEEDEVTTVAVDL 647

Query: 1132 NMCTTINLNSLCNNAENKSVVRNNDTTVSAKLKIRRTGFKPYKRCSIEAKDNRSSAVEEN 1311
            N  TT   + L    E ++   N  + +  KLK R+TGFKPYKRCS+EAK+NR  A +E 
Sbjct: 648  NKSTTSIDHDLDTIGEPRASFPNELSPL--KLKSRQTGFKPYKRCSVEAKENRVPASDEV 705

Query: 1312 GNKRIRLHEEAST 1350
            G KRIRL  EAST
Sbjct: 706  GTKRIRLDSEAST 718


>gb|EMS48518.1| hypothetical protein TRIUR3_13395 [Triticum urartu]
          Length = 585

 Score =  187 bits (476), Expect = 8e-45
 Identities = 141/424 (33%), Positives = 196/424 (46%), Gaps = 23/424 (5%)
 Frame = +1

Query: 148  PSIGS--VHQPFPV----CSPLSYFHSNQDAYRXXXXXXXXXXXXXXXXXXQNPXXXXXX 309
            P IGS    Q FP      +P    H NQDAYR                   NP      
Sbjct: 185  PKIGSSSTAQSFPHNYAGFAPTMQCHCNQDAYRSSLNMSSTFSNMLVSTLLSNPTVHAAA 244

Query: 310  XXXXSLWPSSEAETPVQPTAEISTGEILEKREKSXXXXXXXXXXXXXXXXXXXXXXGXXX 489
                S WP++++  PV P  E+       +   S                      G   
Sbjct: 245  RLAASYWPAADSNIPVGPNQEVFAENAQGRHIGSPPSMASVVAATVAAASAWWATQGLLP 304

Query: 490  XXXXXXXXXXXXXXXXXMGPSADPTRTQVFDGTERKPSEAGQQVPSENQFDSLKPMHHSS 669
                               P+A    T V   TE  P +     P E Q    +    + 
Sbjct: 305  LFAPPMAFPFVPV------PTASFPTTDVQRATENCPVD---NAPKECQVAQEQGQPEAM 355

Query: 670  KPLSPSDSDASGKGQ---NSDKQAARSNKIK--PDSGLQDSEKAKDKKIQDRSSCGSNTP 834
              ++ S SD SGKG+   +++   + ++K++  P +G + S+   +KK QDRSSCGSNTP
Sbjct: 356  IVVASSGSDKSGKGEVSPHTELNISPADKVETTPPTGAETSDAFGNKKKQDRSSCGSNTP 415

Query: 835  SSSEVETDTIEKTHDEKVNNESKESLFSNFSAWEINHRRLRNCGSMNESWKEVSEEGRLA 1014
            SSS+VE + + +  D+  N++++++  SN SA ++NHRR RN  S N+SWKEVSEEGR+A
Sbjct: 416  SSSDVEAEHVPENQDQ-ANDKTQQACCSNSSAGDMNHRRFRNISSTNDSWKEVSEEGRMA 474

Query: 1015 FQALFKREVLPQSFSPPLSDEAAAMLNKGFTELP-ADVDKNMCTTINLNSLCNNAENKSV 1191
            F  LF R  LPQSFSPP ++        G   LP  + D+    T++LN      +++  
Sbjct: 475  FDKLFSRGKLPQSFSPPQAE--------GLKVLPRGEQDEATTVTVDLNKSAAVMDHEL- 525

Query: 1192 VRNNDTTVSAK-----------LKIRRTGFKPYKRCSIEAKDNRSSAVEENGNKRIRLHE 1338
                DT V  +           +K RRTGFKPYKRCS+EAK+NR  A +E G KRIRL  
Sbjct: 526  ----DTLVGPRATFPIELSHLNMKSRRTGFKPYKRCSVEAKENRVPAADEVGTKRIRLDS 581

Query: 1339 EAST 1350
            E ST
Sbjct: 582  EPST 585


>ref|XP_002267720.1| PREDICTED: protein LHY-like [Vitis vinifera]
          Length = 771

 Score =  187 bits (475), Expect = 1e-44
 Identities = 156/445 (35%), Positives = 199/445 (44%), Gaps = 32/445 (7%)
 Frame = +1

Query: 112  NPAVSAM-QFQNPPSIGSVHQPFPVC-SPLSYFHSNQDAYRXXXXXXXXXXXXXXXXXXQ 285
            NPA SA  + QN  S  S+HQ FP   +P     SNQD YR                  Q
Sbjct: 337  NPAASAATEHQNNGSRSSIHQSFPTFHTPFGPIRSNQDDYRSFLQISSTFSSLIVSTLLQ 396

Query: 286  NPXXXXXXXXXXSLWPSSEAETPVQPTAEISTGEILEKREKSXXXXXXXXXXXXXXXXXX 465
            NP          + WP S  E     +A+  +G I     +                   
Sbjct: 397  NPAAHAAASFAATFWPCSNMEA----SADSPSGTIGGFPARQINPAPSMAAIAAATVAAA 452

Query: 466  XXXXGXXXXXXXXXXXXXXXXXXXXMGPSADPTRTQVFDGTERKPSEAGQQVPSENQFD- 642
                                        S  PT T          +E  +  P + Q D 
Sbjct: 453  TAWWAAHGVLPLCAPLHTGFTCAPASATSVPPTNTGQAPAAN---TERRENTPQDQQLDL 509

Query: 643  ----SLKPMHHSSKP--LSPSDSDASGKGQNSDKQAARSNKIKPDS--GLQDSEKAKDKK 798
                +L+  H +SK   +S SDS+ SG  + + +  A  N+    +   L D  K K +K
Sbjct: 510  ECSEALQAQHSASKSPAMSSSDSEESGGAKPNTESTAPDNEKNTTAVTELNDPTKMKSRK 569

Query: 799  IQDRSSCGSNTPSSSEVETDTIEKTHDEKVNNESKESLFSNFSAWEINHRRLRNCGSMNE 978
              DRSSCGSNTPSSSEVETD +EK   E    E KE+   N +A E N+RR R+   +NE
Sbjct: 570  QVDRSSCGSNTPSSSEVETDALEK--HENGEEECKEADV-NQAAGEANNRRCRSTSILNE 626

Query: 979  SWKEVSEEGRLAFQALFKREVLPQSFSPPLSDEAAAMLNKGF--TELPADVDKNMCTTIN 1152
            SWKEVSEEGRLAF+ALF REVLPQSFSPP   +   + NK F   E   D        ++
Sbjct: 627  SWKEVSEEGRLAFRALFSREVLPQSFSPPHDLKNKGLQNKDFIENEQGGDEKHENALQLD 686

Query: 1153 LNSL----CNNAEN--KSVVRNNDTTVS---------AKLKIRRTGFKPYKRCSIEAKDN 1287
            LNS     C++ ++  K+ +  ND              K+K RRTGFKPYKRCS+EA D+
Sbjct: 687  LNSKAWGPCSSHQDVEKNGLMENDNREEGLLTIGLGYGKIKGRRTGFKPYKRCSVEAIDS 746

Query: 1288 R----SSAVEENGNKRIRLHEEAST 1350
            R     S  EE G KRIRL  + ST
Sbjct: 747  RVTNCCSQGEEKGPKRIRLEGDVST 771


>ref|XP_006659144.1| PREDICTED: protein CCA1-like isoform X8 [Oryza brachyantha]
            gi|573953750|ref|XP_006659145.1| PREDICTED: protein
            CCA1-like isoform X9 [Oryza brachyantha]
          Length = 718

 Score =  187 bits (474), Expect = 1e-44
 Identities = 141/410 (34%), Positives = 194/410 (47%), Gaps = 16/410 (3%)
 Frame = +1

Query: 169  QPFP----VCSPLSYFHSNQDAYRXXXXXXXXXXXXXXXXXXQNPXXXXXXXXXXSLWPS 336
            QPFP      +P+   H +QDAYR                   NP          S WP+
Sbjct: 325  QPFPHNYTAFAPIMQCHCDQDAYRSFVNMSSTFSSMLVSTLLSNPAIHAAARLAASYWPA 384

Query: 337  SEAETPVQPTAEISTGEILEKREKSXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXX 516
             ++ +P  P  E  +         S                      G            
Sbjct: 385  IDSNSP-DPNQENISESAQGSHAGSPPNMASIVAATIAAASAWWATQGLLPLFPPPIAFP 443

Query: 517  XXXXXXXXMGPSADPTRTQV------FDGTERKPSEAGQQVPSENQFDSLKPMHHSSKPL 678
                      P+AD  R          D  +++  E  +Q  SE           + K +
Sbjct: 444  FVPAPSAPF-PTADVQRAPEKDIDCPIDNAQKELQETRKQDKSE-----------AMKVI 491

Query: 679  SPSDSDASGKGQ---NSDKQAARSNK--IKPDSGLQDSEKAKDKKIQDRSSCGSNTPSSS 843
              S+SD SG+G+   +++ + + ++K   K  +G   SE   +KK QDRSSCGSNTPSSS
Sbjct: 492  VSSESDESGQGEVLLHTELKISPADKDDTKTATGANTSEVFGNKKKQDRSSCGSNTPSSS 551

Query: 844  EVETDTIEKTHDEKVNNESKESLFSNFSAWEINHRRLRNCGSMNESWKEVSEEGRLAFQA 1023
            ++E D   +   EK N+++K++  SN SA + NHRR R+ GS ++SWKEVSEEGRLAF A
Sbjct: 552  DIEADNAPEKQ-EKANDKAKQASCSNSSAGDTNHRRFRSSGSTSDSWKEVSEEGRLAFDA 610

Query: 1024 LFKREVLPQSFSPPLSDEAAAMLNKGFTEL-PADVDKNMCTTINLNSLCNNAENKSVVRN 1200
            LF RE LPQSFSPP ++ +  +  +   E+    VD N   TI  + L    E ++   N
Sbjct: 611  LFSRERLPQSFSPPQAEGSKEVTKEDEDEVTTVTVDLNKNVTIIDHELDTTDEPRASFPN 670

Query: 1201 NDTTVSAKLKIRRTGFKPYKRCSIEAKDNRSSAVEENGNKRIRLHEEAST 1350
              + +  KLK RRTGFKPYKRCS+EAK+NR  A +E G KRIRL  E ST
Sbjct: 671  ELSNL--KLKSRRTGFKPYKRCSVEAKENRVPASDEVGTKRIRLESETST 718


>ref|XP_006659137.1| PREDICTED: protein CCA1-like isoform X1 [Oryza brachyantha]
            gi|573953736|ref|XP_006659138.1| PREDICTED: protein
            CCA1-like isoform X2 [Oryza brachyantha]
            gi|573953738|ref|XP_006659139.1| PREDICTED: protein
            CCA1-like isoform X3 [Oryza brachyantha]
            gi|573953740|ref|XP_006659140.1| PREDICTED: protein
            CCA1-like isoform X4 [Oryza brachyantha]
            gi|573953742|ref|XP_006659141.1| PREDICTED: protein
            CCA1-like isoform X5 [Oryza brachyantha]
            gi|573953744|ref|XP_006659142.1| PREDICTED: protein
            CCA1-like isoform X6 [Oryza brachyantha]
            gi|573953746|ref|XP_006659143.1| PREDICTED: protein
            CCA1-like isoform X7 [Oryza brachyantha]
          Length = 724

 Score =  187 bits (474), Expect = 1e-44
 Identities = 141/410 (34%), Positives = 194/410 (47%), Gaps = 16/410 (3%)
 Frame = +1

Query: 169  QPFP----VCSPLSYFHSNQDAYRXXXXXXXXXXXXXXXXXXQNPXXXXXXXXXXSLWPS 336
            QPFP      +P+   H +QDAYR                   NP          S WP+
Sbjct: 331  QPFPHNYTAFAPIMQCHCDQDAYRSFVNMSSTFSSMLVSTLLSNPAIHAAARLAASYWPA 390

Query: 337  SEAETPVQPTAEISTGEILEKREKSXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXX 516
             ++ +P  P  E  +         S                      G            
Sbjct: 391  IDSNSP-DPNQENISESAQGSHAGSPPNMASIVAATIAAASAWWATQGLLPLFPPPIAFP 449

Query: 517  XXXXXXXXMGPSADPTRTQV------FDGTERKPSEAGQQVPSENQFDSLKPMHHSSKPL 678
                      P+AD  R          D  +++  E  +Q  SE           + K +
Sbjct: 450  FVPAPSAPF-PTADVQRAPEKDIDCPIDNAQKELQETRKQDKSE-----------AMKVI 497

Query: 679  SPSDSDASGKGQ---NSDKQAARSNK--IKPDSGLQDSEKAKDKKIQDRSSCGSNTPSSS 843
              S+SD SG+G+   +++ + + ++K   K  +G   SE   +KK QDRSSCGSNTPSSS
Sbjct: 498  VSSESDESGQGEVLLHTELKISPADKDDTKTATGANTSEVFGNKKKQDRSSCGSNTPSSS 557

Query: 844  EVETDTIEKTHDEKVNNESKESLFSNFSAWEINHRRLRNCGSMNESWKEVSEEGRLAFQA 1023
            ++E D   +   EK N+++K++  SN SA + NHRR R+ GS ++SWKEVSEEGRLAF A
Sbjct: 558  DIEADNAPEKQ-EKANDKAKQASCSNSSAGDTNHRRFRSSGSTSDSWKEVSEEGRLAFDA 616

Query: 1024 LFKREVLPQSFSPPLSDEAAAMLNKGFTEL-PADVDKNMCTTINLNSLCNNAENKSVVRN 1200
            LF RE LPQSFSPP ++ +  +  +   E+    VD N   TI  + L    E ++   N
Sbjct: 617  LFSRERLPQSFSPPQAEGSKEVTKEDEDEVTTVTVDLNKNVTIIDHELDTTDEPRASFPN 676

Query: 1201 NDTTVSAKLKIRRTGFKPYKRCSIEAKDNRSSAVEENGNKRIRLHEEAST 1350
              + +  KLK RRTGFKPYKRCS+EAK+NR  A +E G KRIRL  E ST
Sbjct: 677  ELSNL--KLKSRRTGFKPYKRCSVEAKENRVPASDEVGTKRIRLESETST 724


>emb|CAN81352.1| hypothetical protein VITISV_012722 [Vitis vinifera]
          Length = 857

 Score =  187 bits (474), Expect = 1e-44
 Identities = 156/445 (35%), Positives = 199/445 (44%), Gaps = 32/445 (7%)
 Frame = +1

Query: 112  NPAVSAM-QFQNPPSIGSVHQPFPVC-SPLSYFHSNQDAYRXXXXXXXXXXXXXXXXXXQ 285
            NPA SA  + QN  S  S+HQ FP   +P     SNQD YR                  Q
Sbjct: 423  NPAASAATEHQNNGSRSSIHQSFPTFHTPFGPIRSNQDDYRSFLQISSTFSSLIVSTLLQ 482

Query: 286  NPXXXXXXXXXXSLWPSSEAETPVQPTAEISTGEILEKREKSXXXXXXXXXXXXXXXXXX 465
            NP          + WP S  E     +A+  +G I     +                   
Sbjct: 483  NPAAHAAASFAATFWPCSNMEA----SADSPSGTIGGFPARQINPAPSMAAIAAATVAAA 538

Query: 466  XXXXGXXXXXXXXXXXXXXXXXXXXMGPSADPTRTQVFDGTERKPSEAGQQVPSENQFD- 642
                                        S  PT T          +E  +  P + Q D 
Sbjct: 539  TAWWAAHGVLPLCAPLHTGFTCAPASATSVPPTNTGQAPAAN---TERRENTPQDQQLDL 595

Query: 643  ----SLKPMHHSSKP--LSPSDSDASGKGQNSDKQAARSNKIKPDS--GLQDSEKAKDKK 798
                +L+  H +SK   +S SDS+ SG  + + +  A  N+    +   L D  K K +K
Sbjct: 596  ECSEALQAQHSASKSPAMSSSDSEESGGAKPNTESTAPDNEKNTTAVTELNDPTKMKSRK 655

Query: 799  IQDRSSCGSNTPSSSEVETDTIEKTHDEKVNNESKESLFSNFSAWEINHRRLRNCGSMNE 978
              DRSSCGSNTPSSSEVETD +EK   E    E KE+   N +A E N+RR R+   +NE
Sbjct: 656  QVDRSSCGSNTPSSSEVETDALEK--HENGEEECKEADV-NQAAGEANNRRCRSTSILNE 712

Query: 979  SWKEVSEEGRLAFQALFKREVLPQSFSPPLSDEAAAMLNKGF--TELPADVDKNMCTTIN 1152
            SWKEVSEEGRLAF+ALF REVLPQSFSPP   +   + NK F   E   D        ++
Sbjct: 713  SWKEVSEEGRLAFRALFSREVLPQSFSPPHDLKNKGLQNKDFIENEQGGDEKHENALQLD 772

Query: 1153 LNSL----CNNAEN--KSVVRNNDTTVS---------AKLKIRRTGFKPYKRCSIEAKDN 1287
            LNS     C++ ++  K+ +  ND              K+K RRTGFKPYKRCS+EA D+
Sbjct: 773  LNSKAWGPCSSHQDVEKNGLMENDNREEGLLTIGLGYGKIKGRRTGFKPYKRCSVEAIDS 832

Query: 1288 R----SSAVEENGNKRIRLHEEAST 1350
            R     S  EE G KRIRL  + ST
Sbjct: 833  RVTNCCSQGEEKGPKRIRLEGDXST 857


>gb|EMT23918.1| hypothetical protein F775_26023 [Aegilops tauschii]
          Length = 586

 Score =  186 bits (471), Expect = 3e-44
 Identities = 141/420 (33%), Positives = 198/420 (47%), Gaps = 19/420 (4%)
 Frame = +1

Query: 148  PSIGS--VHQPFPV----CSPLSYFHSNQDAYRXXXXXXXXXXXXXXXXXXQNPXXXXXX 309
            P +GS    QPFP      +P    H NQDAYR                   NP      
Sbjct: 185  PKMGSSSTAQPFPHNYAGFAPTMQCHCNQDAYRSSLNMSSTFSNMLVSTLLSNPTVHAAA 244

Query: 310  XXXXSLWPSSEAETPVQPTAEISTGEILEKREKSXXXXXXXXXXXXXXXXXXXXXXGXXX 489
                S WP++++  PV P  E+       +   S                      G   
Sbjct: 245  RLAASYWPAADSNIPVGPNQEVFAENAQGRHIGSPPSMASVVAATVAAASAWWATQGLLP 304

Query: 490  XXXXXXXXXXXXXXXXXMGPSADPTRTQVFDGTERKPSEAGQQVPSENQFDSLKPMHHSS 669
                               P+AD  R      TE  P +     P E Q    +    + 
Sbjct: 305  LFAPPMAFPFVPVPTASF-PTADVQRA-----TENFPVD---NAPKECQVAQEQGQPEAM 355

Query: 670  KPLSPSDSDASGKGQ---NSDKQAARSNKIK--PDSGLQDSEKAKDKKIQDRSSCGSNTP 834
              ++ S SD SGKG+   +++   + ++K++  P +G + S+   +KK QDRSSCGSNTP
Sbjct: 356  IVVASSVSDESGKGEVSPHTELNISPADKVETTPPTGAETSDAFGNKKKQDRSSCGSNTP 415

Query: 835  SSSEVETDTIEKTHDEKVNNESKESLFSNFSAWEINHRRLRNCGSMNESWKEVSEEGRLA 1014
            SSS+VE + + +  D+  N++++++  SN SA ++NHRR RN  S N+SWKEVSEEGR+A
Sbjct: 416  SSSDVEAEHVPENQDQ-ANDKTQQACCSNSSAGDMNHRRFRNISSTNDSWKEVSEEGRMA 474

Query: 1015 FQALFKREVLPQSFSPPLSDEAAAMLNKGFTELP-ADVDKNMCTTINLN--SLCNNAENK 1185
            F  LF R  LPQSFSPP ++        G   +P  + D+    T++LN  +   + E  
Sbjct: 475  FDKLFSRGKLPQSFSPPQAE--------GLKVVPRGEQDEATTVTVDLNKSAAVMDHELD 526

Query: 1186 SVVRNNDTTVSAKL-----KIRRTGFKPYKRCSIEAKDNRSSAVEENGNKRIRLHEEAST 1350
            ++V     T   +L     K RRTGFKPYKRCS+EAK+NR  A +E G KRIRL  E ST
Sbjct: 527  TLVGPRAATFPIELSHLNMKSRRTGFKPYKRCSVEAKENRVPASDEVGTKRIRLDSEPST 586


>ref|XP_003573469.1| PREDICTED: protein LHY-like [Brachypodium distachyon]
          Length = 716

 Score =  186 bits (471), Expect = 3e-44
 Identities = 150/480 (31%), Positives = 217/480 (45%), Gaps = 34/480 (7%)
 Frame = +1

Query: 13   THIKQHPSCTNGIETEDPDA---------QNPAAVMN-----TKPSSN---PAVSA-MQF 138
            TH  QHP+  +  + +   A         ++PA   N      K + N   P +S   +F
Sbjct: 257  THTDQHPTRASHYQMDRTGASGIPVIGTEKSPADQTNDQVGVAKGNMNCLHPTLSVDPKF 316

Query: 139  QNPPSIGSVHQPFPVCSPLSYFHSNQDAYRXXXXXXXXXXXXXXXXXXQNPXXXXXXXXX 318
             N  +   +   +   +P+   H NQDAY+                   NP         
Sbjct: 317  DNSSTAQPITHNYAAFAPMMQCHCNQDAYKSSVNMSSAFSSMLVSTLLSNPAVHAAARLA 376

Query: 319  XSLWPSSEAETPVQPTAEISTGEILEKREKSXXXXXXXXXXXXXXXXXXXXXXGXXXXXX 498
             S WPS  A++PV P  E  +     +   S                      G      
Sbjct: 377  ASYWPS--ADSPVDPNQESPSDNAQGRHIGSPPSMASIVAATVAAASAWWATQGLLPLFA 434

Query: 499  XXXXXXXXXXXXXXMGPSADPTRTQVFDGTERKPSEAGQQVPSENQFDSLKPMHHSSKPL 678
                            PSA      V   +E  P +     P E Q    +    +   +
Sbjct: 435  PPMAFPFVPV------PSASFPTADVQRASENFPVDC---TPKECQVAQKQGQPEAVMVV 485

Query: 679  SPSDSDASGKGQ---NSDKQAARSNK--IKPDSGLQDSEKAKDKKIQDRSSCGSNTPSSS 843
            + S SD SG G+   +++ + + ++K  I P +G   S+   +KK QDRSSCGSNTPSSS
Sbjct: 486  ASSQSDESGNGEVSLHTEIKISPTDKAEITPATGADTSDAFGNKKKQDRSSCGSNTPSSS 545

Query: 844  EVETDTIEKTHDEKVNNESKESLFSNFSAWEINHRRLRNCGSMNESWKEVSEEGRLAFQA 1023
            +VE + + +  D+ VN++ +++  +N SA + NHRR R+  S +ESWKEVSEEGR+AF A
Sbjct: 546  DVEAEHVPEKQDQ-VNDKEQQASCNNLSAGDTNHRRFRSIASTSESWKEVSEEGRMAFDA 604

Query: 1024 LFKREVLPQSFSPPLSDEAAAMLNKGFTELPADVDKNMCTTINLNSLCNNAENKSVVRNN 1203
            LF R  LPQSFSPP ++ + A+  +   E   D  + +  T++LN   +      + R  
Sbjct: 605  LFSRGKLPQSFSPPQAEGSKAVSKEVSKE---DQGEAITVTVDLNECAS-----IIDREL 656

Query: 1204 DTTVS-----------AKLKIRRTGFKPYKRCSIEAKDNRSSAVEENGNKRIRLHEEAST 1350
            DT+V              +K RRTGFKPYKRCS+EAK+NR  A +E G KRIRL  EAST
Sbjct: 657  DTSVGPIASLPIELSHLNMKSRRTGFKPYKRCSVEAKENRVPASDEVGTKRIRLDSEAST 716


>gb|ACN25207.1| unknown [Zea mays]
          Length = 307

 Score =  185 bits (470), Expect = 4e-44
 Identities = 117/265 (44%), Positives = 159/265 (60%), Gaps = 13/265 (4%)
 Frame = +1

Query: 595  KPSEAGQQVPSEN-----QFDSLKPMHHSSKPLSPSDSDASGKGQNS-----DKQAARSN 744
            +PSE  +  P+EN     Q    +      +  + S+SD SGKG+ S         A++ 
Sbjct: 48   RPSEKDRDCPAENAQIECQEARKQVQFEGLRIAASSESDGSGKGEVSLHTELKLSPAQNA 107

Query: 745  KIKPDSGLQDSEKAKDKKIQDRSSCGSNTPSSSEVETDTIEKTHDEKVNNESKESLFSNF 924
               P +G   ++  ++KK QDRSSCGSNTPSSS+V+   + +  ++  N ++K++  SN 
Sbjct: 108  DATPTTGAGTNDAFRNKKKQDRSSCGSNTPSSSDVDAGNVPE--EDNANEKAKQASCSNS 165

Query: 925  SAWEINHRRLRNCGSMNESWKEVSEEGRLAFQALFKREVLPQSFSPPL---SDEAAAMLN 1095
            SA + NHRR R+ GS ++SWKEVSEEGRLAF ALF RE LPQSFSPP    S E A    
Sbjct: 166  SAGDTNHRRFRSNGSTSDSWKEVSEEGRLAFDALFSREKLPQSFSPPQAVDSKEVAKEEE 225

Query: 1096 KGFTELPADVDKNMCTTINLNSLCNNAENKSVVRNNDTTVSAKLKIRRTGFKPYKRCSIE 1275
               T +  D++KN  T+I+ + L    E ++   N  + +  KLK RRTGFKPYKRCS+E
Sbjct: 226  DEVTTVAVDLNKN-ATSIDHDDLDTMDEPRASFPNELSHL--KLKSRRTGFKPYKRCSVE 282

Query: 1276 AKDNRSSAVEENGNKRIRLHEEAST 1350
            AK+NR  A +  G KRIRL  EAST
Sbjct: 283  AKENRVPASDMVGTKRIRLDSEAST 307


>dbj|BAH09383.1| transcription factor LHY [Populus nigra] gi|219687749|dbj|BAH09385.1|
            PnLHY2 [Populus nigra]
          Length = 764

 Score =  178 bits (451), Expect = 7e-42
 Identities = 154/447 (34%), Positives = 199/447 (44%), Gaps = 34/447 (7%)
 Frame = +1

Query: 109  SNPAVS-AMQFQNPPSIGSVHQPFPVCSP-LSYFHSNQDAYRXXXXXXXXXXXXXXXXXX 282
            S+PA S      N     S+HQ FP   P  +  H NQD YR                  
Sbjct: 326  SHPAASKTTDHPNISPRSSMHQSFPSFPPPFTPTHHNQDDYRSFLHMSSTFSSLVVSSLL 385

Query: 283  QNPXXXXXXXXXXSLWPSSEAETPVQPTAEISTGEILEKREKSXXXXXXXXXXXXXXXXX 462
            QNP          + WP    E+     A  + G    ++  S                 
Sbjct: 386  QNPAAHAAASFASTFWPYGNVESSADSPA-CAQGGFQSRQLNSAPSMAAIVAATVAAATA 444

Query: 463  XXXXXGXXXXXXXXXXXXXXXXXXXXMGPSADPTRTQVFDGTERK-----PSEAGQQVPS 627
                 G                       S D  +      TERK     PS  GQ +  
Sbjct: 445  WWTAHGLLPMCAPLHTSFACPPASATAIQSVDTGQVSATK-TERKETAENPSLQGQ-IQD 502

Query: 628  ENQFDSLKPMHHSSKP--LSPSDSDASGKGQNSDKQAARSNKI--KPDSGLQDSEKAKDK 795
            +   ++L+  + +SK   ++ SDS+ SG  Q + +     +++  KP   +QDS K K +
Sbjct: 503  QEHTEALQAQNSASKSPKITSSDSEESGGPQLNTRPEVIDHELTTKPHE-VQDSSKTKSR 561

Query: 796  KIQDRSSCGSNTPSSSEVETDTIEKTHDEKVNNESKESLFSNFSAWEINHRRLRNCGSMN 975
            K+ DRSSCGSNTPSSSE+ETD +EK   EK   E KE   +N  A E + R  R+  SMN
Sbjct: 562  KLIDRSSCGSNTPSSSEIETDALEKA--EKGTEEPKED-DANHPASESSSRHSRSSSSMN 618

Query: 976  ESWKEVSEEGRLAFQALFKREVLPQSFSPPLSDEAAAMLNKGFTE-LPADVDKNMCTTIN 1152
            +SWKEVSEEGRLAFQ LF REVLPQSFSPP   ++    N+   E   AD      + IN
Sbjct: 619  DSWKEVSEEGRLAFQTLFAREVLPQSFSPPHDLKSKMHQNEDAGEKKDADEKDGDASLIN 678

Query: 1153 LN------------------SLCNNAENKSVVRNNDTTVSAKLKIRRTGFKPYKRCSIEA 1278
            LN                  S C N   + ++         KLK+RRTGFKPYKRCS+EA
Sbjct: 679  LNTKTWECCSGHQEGEKNALSRCENYGEEGLLTIG--LGHGKLKVRRTGFKPYKRCSLEA 736

Query: 1279 KDNR----SSAVEENGNKRIRLHEEAS 1347
            K++R    S   EE G KR+RL  EAS
Sbjct: 737  KESRTGTGSGQGEEKGPKRLRLEGEAS 763


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