BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00009034
         (701 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s...   246   4e-63
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi...   246   4e-63
ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, ...   243   4e-62
gb|ABK26380.1| unknown [Picea sitchensis]                             237   3e-60
ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, I...   235   1e-59
ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, ...   234   2e-59
ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, ...   234   3e-59
ref|XP_003580476.1| PREDICTED: DNA-directed RNA polymerases I, I...   234   3e-59
ref|XP_003563485.1| PREDICTED: DNA-directed RNA polymerases I, I...   231   2e-58
ref|NP_001147399.1| LOC100281008 [Zea mays] gi|194699730|gb|ACF8...   228   2e-57
ref|XP_004152137.1| PREDICTED: DNA-directed RNA polymerases I, I...   226   4e-57
gb|ACG27451.1| DNA-directed RNA polymerases I, II, and III 17.1 ...   226   4e-57
ref|NP_001051880.1| Os03g0845700 [Oryza sativa Japonica Group] g...   226   7e-57
gb|EEC76521.1| hypothetical protein OsI_14307 [Oryza sativa Indi...   226   7e-57
gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subun...   224   2e-56
ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, I...   219   7e-55
ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [S...   218   1e-54
gb|EOY13785.1| RNA polymerase Rpb8 isoform 1 [Theobroma cacao]        216   6e-54
ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [S...   216   7e-54
ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III ...   216   7e-54

>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
           sativa Japonica Group]
          Length = 396

 Score =  246 bits (629), Expect = 4e-63
 Identities = 118/147 (80%), Positives = 135/147 (91%)
 Frame = +3

Query: 81  KMVELLFEDIFTLTKIDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEIYPLHVGDKFTMV 260
           KMVE LFEDIFT+T++DPDGKKFD+VSRIEARSEQFDM+M LDV TE+YP+  GD+FTMV
Sbjct: 250 KMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMV 309

Query: 261 LSPTLNLDGTPDTGYFLQGNRKSLADKFEYVMHGKLYKISEEASGGQNIKVEIYASFGGL 440
           L+PTLNLDGTPDTG++ Q  RK+LADKF+YVMHGKLYKISE++S GQ  KVEIYASFGGL
Sbjct: 310 LAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGL 369

Query: 441 LMMLKGDPSNAAQFELDQRVFLLIRKV 521
           LMMLKGDPS+AA FELDQR+FLLIRKV
Sbjct: 370 LMMLKGDPSSAASFELDQRLFLLIRKV 396


>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
           gi|125598367|gb|EAZ38147.1| hypothetical protein
           OsJ_22498 [Oryza sativa Japonica Group]
          Length = 191

 Score =  246 bits (629), Expect = 4e-63
 Identities = 118/147 (80%), Positives = 135/147 (91%)
 Frame = +3

Query: 81  KMVELLFEDIFTLTKIDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEIYPLHVGDKFTMV 260
           KMVE LFEDIFT+T++DPDGKKFD+VSRIEARSEQFDM+M LDV TE+YP+  GD+FTMV
Sbjct: 45  KMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMV 104

Query: 261 LSPTLNLDGTPDTGYFLQGNRKSLADKFEYVMHGKLYKISEEASGGQNIKVEIYASFGGL 440
           L+PTLNLDGTPDTG++ Q  RK+LADKF+YVMHGKLYKISE++S GQ  KVEIYASFGGL
Sbjct: 105 LAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGL 164

Query: 441 LMMLKGDPSNAAQFELDQRVFLLIRKV 521
           LMMLKGDPS+AA FELDQR+FLLIRKV
Sbjct: 165 LMMLKGDPSSAASFELDQRLFLLIRKV 191


>ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like isoform X1 [Oryza brachyantha]
           gi|573948243|ref|XP_006656428.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like isoform X2
           [Oryza brachyantha] gi|573948245|ref|XP_006656429.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 8B-like isoform X3 [Oryza brachyantha]
           gi|573948247|ref|XP_006656430.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like isoform X4
           [Oryza brachyantha] gi|573948249|ref|XP_006656431.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 8B-like isoform X5 [Oryza brachyantha]
          Length = 146

 Score =  243 bits (620), Expect = 4e-62
 Identities = 117/146 (80%), Positives = 132/146 (90%)
 Frame = +3

Query: 84  MVELLFEDIFTLTKIDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEIYPLHVGDKFTMVL 263
           MVE LFEDIFT+T++DPDGKKFD+VSRIEARSEQFDM+M LDV TE+YP+  GDKFTMVL
Sbjct: 1   MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRPGDKFTMVL 60

Query: 264 SPTLNLDGTPDTGYFLQGNRKSLADKFEYVMHGKLYKISEEASGGQNIKVEIYASFGGLL 443
           +PTLNLDGTPD G++ Q  RK+LADK++YVMHGKLYKISE+ SGGQ  KVEIYASFGGLL
Sbjct: 61  APTLNLDGTPDIGFYTQAGRKTLADKYDYVMHGKLYKISEDGSGGQATKVEIYASFGGLL 120

Query: 444 MMLKGDPSNAAQFELDQRVFLLIRKV 521
           MMLKGDPS AA FELDQR+FLLIRKV
Sbjct: 121 MMLKGDPSTAANFELDQRLFLLIRKV 146


>gb|ABK26380.1| unknown [Picea sitchensis]
          Length = 145

 Score =  237 bits (604), Expect = 3e-60
 Identities = 115/146 (78%), Positives = 132/146 (90%)
 Frame = +3

Query: 84  MVELLFEDIFTLTKIDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEIYPLHVGDKFTMVL 263
           MVELLFEDIFT+T+IDPDGKKFDKVSRIEARSEQFDM+M LDVN ++YP+ VG+KF + L
Sbjct: 1   MVELLFEDIFTVTRIDPDGKKFDKVSRIEARSEQFDMYMLLDVNIDVYPVSVGEKFAVAL 60

Query: 264 SPTLNLDGTPDTGYFLQGNRKSLADKFEYVMHGKLYKISEEASGGQNIKVEIYASFGGLL 443
           +PTLNLDGTPD GYF+QG RKSLADK+EYVM+GKLY +SEE SG  N+KVEI ASFGGLL
Sbjct: 61  APTLNLDGTPDNGYFIQGGRKSLADKYEYVMYGKLYNLSEEGSGA-NVKVEINASFGGLL 119

Query: 444 MMLKGDPSNAAQFELDQRVFLLIRKV 521
           M+LKGDPSNA  FELDQR+FLL+RKV
Sbjct: 120 MLLKGDPSNAGNFELDQRLFLLMRKV 145


>ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like isoform 1 [Solanum lycopersicum]
           gi|460377396|ref|XP_004234479.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit rpabc3-like
           isoform 2 [Solanum lycopersicum]
          Length = 145

 Score =  235 bits (599), Expect = 1e-59
 Identities = 115/146 (78%), Positives = 133/146 (91%)
 Frame = +3

Query: 84  MVELLFEDIFTLTKIDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEIYPLHVGDKFTMVL 263
           MVE LFEDIFT+T+ DPDGKKFD+V+RIEARSEQFDMFM LDVNTEIYP+ V DKF MVL
Sbjct: 1   MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDVNTEIYPMRVKDKFMMVL 60

Query: 264 SPTLNLDGTPDTGYFLQGNRKSLADKFEYVMHGKLYKISEEASGGQNIKVEIYASFGGLL 443
           + TLNLDGTPDTGYF+QGN+KSLADKFEYVMHGKLY+ISEE S G+++K +I+ SFGGLL
Sbjct: 61  ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGS-GKHVKADIFVSFGGLL 119

Query: 444 MMLKGDPSNAAQFELDQRVFLLIRKV 521
           M L+GDPS AA+FELDQ++FLLIRKV
Sbjct: 120 MQLRGDPSIAAKFELDQKIFLLIRKV 145


>ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Solanum tuberosum]
          Length = 145

 Score =  234 bits (598), Expect = 2e-59
 Identities = 114/146 (78%), Positives = 133/146 (91%)
 Frame = +3

Query: 84  MVELLFEDIFTLTKIDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEIYPLHVGDKFTMVL 263
           MVE LFEDIFT+T+ DPDGKKFD+V+RIEARSEQFDMFM LD+NTEIYP+ V DKF MVL
Sbjct: 1   MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDINTEIYPMRVKDKFMMVL 60

Query: 264 SPTLNLDGTPDTGYFLQGNRKSLADKFEYVMHGKLYKISEEASGGQNIKVEIYASFGGLL 443
           + TLNLDGTPDTGYF+QGN+KSLADKFEYVMHGKLY+ISEE S G+++K +I+ SFGGLL
Sbjct: 61  ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGS-GKHVKADIFVSFGGLL 119

Query: 444 MMLKGDPSNAAQFELDQRVFLLIRKV 521
           M L+GDPS AA+FELDQ++FLLIRKV
Sbjct: 120 MQLRGDPSIAAKFELDQKIFLLIRKV 145


>ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Oryza brachyantha]
          Length = 147

 Score =  234 bits (596), Expect = 3e-59
 Identities = 112/147 (76%), Positives = 132/147 (89%), Gaps = 1/147 (0%)
 Frame = +3

Query: 84  MVELLFEDIFTLTKIDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEIYPLHVGDKFTMVL 263
           M E LFEDIFT+T++DPDGKKFD+VSRIEAR+EQ +++M LDV T++YP+H GDKFTMVL
Sbjct: 1   MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARNEQLNVYMQLDVATDVYPMHPGDKFTMVL 60

Query: 264 SPTLNLDGTPDTGYFLQGNRKSLADKFEYVMHGKLYKISEE-ASGGQNIKVEIYASFGGL 440
            PTLNLDGTPDTG+F Q  RK+LADK+EYVMHGKLYKISE+  + GQN KVE+YASFGGL
Sbjct: 61  VPTLNLDGTPDTGFFTQAGRKTLADKYEYVMHGKLYKISEDKETSGQNAKVEMYASFGGL 120

Query: 441 LMMLKGDPSNAAQFELDQRVFLLIRKV 521
           LMMLKGDPS+AA FELDQR+FLL+RKV
Sbjct: 121 LMMLKGDPSSAANFELDQRLFLLMRKV 147


>ref|XP_003580476.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like [Brachypodium distachyon]
          Length = 146

 Score =  234 bits (596), Expect = 3e-59
 Identities = 111/146 (76%), Positives = 129/146 (88%)
 Frame = +3

Query: 84  MVELLFEDIFTLTKIDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEIYPLHVGDKFTMVL 263
           M E LFEDIF + +IDPDGKKFD+V+RIEARSEQF M+M LDV T +YP+H GDKFTMVL
Sbjct: 1   MAEHLFEDIFVVNRIDPDGKKFDRVNRIEARSEQFHMYMQLDVATYVYPMHAGDKFTMVL 60

Query: 264 SPTLNLDGTPDTGYFLQGNRKSLADKFEYVMHGKLYKISEEASGGQNIKVEIYASFGGLL 443
           +PTLNLDGTPDTGY+ Q  RK+LADK++YVMHGKLYKISE++SGGQ  KVE YASFGGLL
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDSSGGQAAKVETYASFGGLL 120

Query: 444 MMLKGDPSNAAQFELDQRVFLLIRKV 521
           M+LKGDPS+AA  ELDQR+FLL+RKV
Sbjct: 121 MLLKGDPSSAANLELDQRLFLLMRKV 146


>ref|XP_003563485.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like [Brachypodium distachyon]
          Length = 144

 Score =  231 bits (588), Expect = 2e-58
 Identities = 111/146 (76%), Positives = 131/146 (89%)
 Frame = +3

Query: 84  MVELLFEDIFTLTKIDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEIYPLHVGDKFTMVL 263
           M E LFEDIF +++IDPDGKKFD+V+RIEARSEQ  M+M LDV T++YP+H GDKFTMVL
Sbjct: 1   MAEHLFEDIFVVSRIDPDGKKFDRVNRIEARSEQ--MYMQLDVATDVYPMHAGDKFTMVL 58

Query: 264 SPTLNLDGTPDTGYFLQGNRKSLADKFEYVMHGKLYKISEEASGGQNIKVEIYASFGGLL 443
           +PTLNLDGTPDTGY+ Q  RK+LADK++YVMHGKLYKISE++SGGQ  KVEIYASFGGLL
Sbjct: 59  APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDSSGGQAAKVEIYASFGGLL 118

Query: 444 MMLKGDPSNAAQFELDQRVFLLIRKV 521
           M+LKGDPS+AA  ELDQR+FLL+RKV
Sbjct: 119 MLLKGDPSSAANLELDQRLFLLMRKV 144


>ref|NP_001147399.1| LOC100281008 [Zea mays] gi|194699730|gb|ACF83949.1| unknown [Zea
           mays] gi|195607894|gb|ACG25777.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|195608506|gb|ACG26083.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|195611040|gb|ACG27350.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|195649823|gb|ACG44379.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|195653495|gb|ACG46215.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|238014148|gb|ACR38109.1| unknown [Zea mays]
           gi|413932441|gb|AFW66992.1| DNA-directed RNA polymerase
           I, II, and III polypeptide isoform 1 [Zea mays]
           gi|413932442|gb|AFW66993.1| DNA-directed RNA polymerase
           I, II, and III polypeptide isoform 2 [Zea mays]
           gi|413932443|gb|AFW66994.1| DNA-directed RNA polymerase
           I, II, and III polypeptide isoform 3 [Zea mays]
           gi|413932444|gb|AFW66995.1| DNA-directed RNA polymerase
           I, II, and III polypeptide isoform 4 [Zea mays]
          Length = 146

 Score =  228 bits (580), Expect = 2e-57
 Identities = 106/146 (72%), Positives = 126/146 (86%)
 Frame = +3

Query: 84  MVELLFEDIFTLTKIDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEIYPLHVGDKFTMVL 263
           M E LFED F +T++DPDGKKFD+VSR+EARSEQ DM+M LDV T++YP+H G+KF MV+
Sbjct: 1   MSEHLFEDTFVVTRLDPDGKKFDRVSRVEARSEQLDMYMQLDVATDVYPMHAGEKFNMVI 60

Query: 264 SPTLNLDGTPDTGYFLQGNRKSLADKFEYVMHGKLYKISEEASGGQNIKVEIYASFGGLL 443
           +PTLNLDGTPDTGY+ Q  RK+LAD +EYVM GKLYKISE+ S  QN KVE+YASFGGLL
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSSQNAKVEMYASFGGLL 120

Query: 444 MMLKGDPSNAAQFELDQRVFLLIRKV 521
           M+L+GDPS AA FELDQR+FLLIRKV
Sbjct: 121 MLLRGDPSTAASFELDQRLFLLIRKV 146


>ref|XP_004152137.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like [Cucumis sativus]
           gi|449484745|ref|XP_004156968.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit rpabc3-like
           [Cucumis sativus]
          Length = 144

 Score =  226 bits (577), Expect = 4e-57
 Identities = 110/146 (75%), Positives = 131/146 (89%)
 Frame = +3

Query: 84  MVELLFEDIFTLTKIDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEIYPLHVGDKFTMVL 263
           MVELLF+DIF + +++PDGKKFDKV+RIEA+SE+FDMFMHLD+N+EIYPL  G+KF+M L
Sbjct: 1   MVELLFDDIFKIERLNPDGKKFDKVTRIEAKSEKFDMFMHLDINSEIYPLKEGEKFSMAL 60

Query: 264 SPTLNLDGTPDTGYFLQGNRKSLADKFEYVMHGKLYKISEEASGGQNIKVEIYASFGGLL 443
           +PTLNLDGTPDTGYFLQGNRKSLAD++EYVM GKL++ISE  S G   K EI ASFGGLL
Sbjct: 61  APTLNLDGTPDTGYFLQGNRKSLADRYEYVMQGKLFRISE--SSGHGGKAEIDASFGGLL 118

Query: 444 MMLKGDPSNAAQFELDQRVFLLIRKV 521
           MMLKGDPS+ ++FELDQR+FLLIRKV
Sbjct: 119 MMLKGDPSHCSKFELDQRLFLLIRKV 144


>gb|ACG27451.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide
           [Zea mays]
          Length = 146

 Score =  226 bits (577), Expect = 4e-57
 Identities = 105/146 (71%), Positives = 126/146 (86%)
 Frame = +3

Query: 84  MVELLFEDIFTLTKIDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEIYPLHVGDKFTMVL 263
           M + LFED F +T++DPDGKKFD+VSR+EARSEQ DM+M LDV T++YP+H G+KF MV+
Sbjct: 1   MSDHLFEDTFVVTRLDPDGKKFDRVSRVEARSEQLDMYMQLDVATDVYPMHAGEKFNMVI 60

Query: 264 SPTLNLDGTPDTGYFLQGNRKSLADKFEYVMHGKLYKISEEASGGQNIKVEIYASFGGLL 443
           +PTLNLDGTPDTGY+ Q  RK+LAD +EYVM GKLYKISE+ S  QN KVE+YASFGGLL
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSSQNAKVEMYASFGGLL 120

Query: 444 MMLKGDPSNAAQFELDQRVFLLIRKV 521
           M+L+GDPS AA FELDQR+FLLIRKV
Sbjct: 121 MLLRGDPSTAASFELDQRLFLLIRKV 146


>ref|NP_001051880.1| Os03g0845700 [Oryza sativa Japonica Group]
           gi|29244685|gb|AAO73277.1| putative RNA polymerase
           [Oryza sativa Japonica Group] gi|41469638|gb|AAS07361.1|
           putative RNA polymerase [Oryza sativa Japonica Group]
           gi|108712076|gb|ABF99871.1| RNA polymerase Rpb8 family
           protein, expressed [Oryza sativa Japonica Group]
           gi|108712077|gb|ABF99872.1| RNA polymerase Rpb8 family
           protein, expressed [Oryza sativa Japonica Group]
           gi|113550351|dbj|BAF13794.1| Os03g0845700 [Oryza sativa
           Japonica Group] gi|125588624|gb|EAZ29288.1| hypothetical
           protein OsJ_13351 [Oryza sativa Japonica Group]
           gi|215692970|dbj|BAG88390.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 148

 Score =  226 bits (575), Expect = 7e-57
 Identities = 110/148 (74%), Positives = 131/148 (88%), Gaps = 2/148 (1%)
 Frame = +3

Query: 84  MVELLFEDIFTLTKIDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEIYPLHVGDKFTMVL 263
           M E LFEDIFT+T++DPDGKKFD+VSRIEARS+QFDM+M LDV T++YP+H GD+FTMVL
Sbjct: 1   MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMVL 60

Query: 264 SPTLNLDGTPDTGYFLQGNRKSLADKFEYVMHGKLYKISEEA-SGGQNI-KVEIYASFGG 437
            PTLNLDGTPD+ +F Q  RK+LADK+EYVMHGKLYKISE+  +  QN  KVE+YASFGG
Sbjct: 61  VPTLNLDGTPDSAFFTQAGRKTLADKYEYVMHGKLYKISEDKDTSDQNAKKVEMYASFGG 120

Query: 438 LLMMLKGDPSNAAQFELDQRVFLLIRKV 521
           LL+MLKGDPS+AA FELDQR+FLL+RKV
Sbjct: 121 LLVMLKGDPSSAANFELDQRLFLLMRKV 148


>gb|EEC76521.1| hypothetical protein OsI_14307 [Oryza sativa Indica Group]
          Length = 215

 Score =  226 bits (575), Expect = 7e-57
 Identities = 110/148 (74%), Positives = 131/148 (88%), Gaps = 2/148 (1%)
 Frame = +3

Query: 84  MVELLFEDIFTLTKIDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEIYPLHVGDKFTMVL 263
           M E LFEDIFT+T++DPDGKKFD+VSRIEARS+QFDM+M LDV T++YP+H GD+FTMVL
Sbjct: 68  MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMVL 127

Query: 264 SPTLNLDGTPDTGYFLQGNRKSLADKFEYVMHGKLYKISEEA-SGGQNI-KVEIYASFGG 437
            PTLNLDGTPD+ +F Q  RK+LADK+EYVMHGKLYKISE+  +  QN  KVE+YASFGG
Sbjct: 128 VPTLNLDGTPDSAFFTQAGRKTLADKYEYVMHGKLYKISEDKDTSDQNAKKVEMYASFGG 187

Query: 438 LLMMLKGDPSNAAQFELDQRVFLLIRKV 521
           LL+MLKGDPS+AA FELDQR+FLL+RKV
Sbjct: 188 LLVMLKGDPSSAANFELDQRLFLLMRKV 215


>gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subunit rpabc3
           [Aegilops tauschii]
          Length = 220

 Score =  224 bits (572), Expect = 2e-56
 Identities = 108/148 (72%), Positives = 129/148 (87%), Gaps = 2/148 (1%)
 Frame = +3

Query: 84  MVELLFEDIFTLTKIDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEIYPLHVGDKFTMVL 263
           M E LFEDIF +T+IDPDGKKFD+V+RIEARSEQ +M+M LD+ T++YP+H+GDKFTMVL
Sbjct: 1   MAEHLFEDIFHVTRIDPDGKKFDRVNRIEARSEQLEMYMQLDIATDVYPMHMGDKFTMVL 60

Query: 264 SPTLNLDGTPDTGYFLQGNRKSLADKFEYVMHGKLYKISEEASGGQN--IKVEIYASFGG 437
           +PTLNLDGTPDTGY+ Q  RK+LADK++YVMHGKLYKISE+ S       KVEIYASFGG
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDNSSKDKGPTKVEIYASFGG 120

Query: 438 LLMMLKGDPSNAAQFELDQRVFLLIRKV 521
           LLM+LKGDPS+AA  ELDQ++FLLIRKV
Sbjct: 121 LLMLLKGDPSSAANLELDQKLFLLIRKV 148


>ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3 isoform 1 [Vitis vinifera]
           gi|359478220|ref|XP_003632088.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit rpabc3 isoform 2
           [Vitis vinifera] gi|296084252|emb|CBI24640.3| unnamed
           protein product [Vitis vinifera]
          Length = 145

 Score =  219 bits (558), Expect = 7e-55
 Identities = 109/146 (74%), Positives = 122/146 (83%)
 Frame = +3

Query: 84  MVELLFEDIFTLTKIDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEIYPLHVGDKFTMVL 263
           M   LF DIF + +IDPDGKKFDKVSRIEA+SEQ DM+M LDVNTEIYP+H G+KF M L
Sbjct: 1   MENTLFGDIFKVIQIDPDGKKFDKVSRIEAQSEQLDMYMQLDVNTEIYPMHAGEKFAMSL 60

Query: 264 SPTLNLDGTPDTGYFLQGNRKSLADKFEYVMHGKLYKISEEASGGQNIKVEIYASFGGLL 443
           + TL+LDGTPDTGY+ Q  RKSLADKFEYVMHGKLYKISEE S G N+K  IY SFGGLL
Sbjct: 61  ASTLDLDGTPDTGYYTQAGRKSLADKFEYVMHGKLYKISEEGS-GPNVKGVIYVSFGGLL 119

Query: 444 MMLKGDPSNAAQFELDQRVFLLIRKV 521
           MML GDP+N A+ +LDQRVFLLIRKV
Sbjct: 120 MMLSGDPANTAKLDLDQRVFLLIRKV 145


>ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [Sorghum bicolor]
           gi|241919960|gb|EER93104.1| hypothetical protein
           SORBIDRAFT_01g001330 [Sorghum bicolor]
          Length = 145

 Score =  218 bits (555), Expect = 1e-54
 Identities = 106/146 (72%), Positives = 124/146 (84%)
 Frame = +3

Query: 84  MVELLFEDIFTLTKIDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEIYPLHVGDKFTMVL 263
           M E LFED F ++++DPDGKKFDKVSR+EARSEQ  M+M LDV T++YPL  G+KF MVL
Sbjct: 1   MSEHLFEDTFIVSRLDPDGKKFDKVSRVEARSEQLGMYMQLDVATDVYPLRAGEKFNMVL 60

Query: 264 SPTLNLDGTPDTGYFLQGNRKSLADKFEYVMHGKLYKISEEASGGQNIKVEIYASFGGLL 443
           +PTLNLDGTPDTGY+ Q  RK+LAD +EYVM GKLYKISE+ S  QN KVEIYASFGGLL
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTS-SQNAKVEIYASFGGLL 119

Query: 444 MMLKGDPSNAAQFELDQRVFLLIRKV 521
           M+L+GDPS AA FELDQR+FLL+RKV
Sbjct: 120 MLLRGDPSTAASFELDQRLFLLMRKV 145


>gb|EOY13785.1| RNA polymerase Rpb8 isoform 1 [Theobroma cacao]
          Length = 145

 Score =  216 bits (550), Expect = 6e-54
 Identities = 103/143 (72%), Positives = 126/143 (88%)
 Frame = +3

Query: 93  LLFEDIFTLTKIDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEIYPLHVGDKFTMVLSPT 272
           + FEDIF + K+DPDGKKFDKV+RIEARS+  DMFMHLDVN+EIYP+HVGDKFTM L+ T
Sbjct: 5   IFFEDIFVVDKLDPDGKKFDKVTRIEARSQNCDMFMHLDVNSEIYPMHVGDKFTMALAHT 64

Query: 273 LNLDGTPDTGYFLQGNRKSLADKFEYVMHGKLYKISEEASGGQNIKVEIYASFGGLLMML 452
           LNLDGTPDTGY+  G RKSLADK+EYVMHGKLYK+S++ S G+ +K EIY S+GGLLMML
Sbjct: 65  LNLDGTPDTGYYTPG-RKSLADKYEYVMHGKLYKVSDDGS-GKGLKAEIYVSYGGLLMML 122

Query: 453 KGDPSNAAQFELDQRVFLLIRKV 521
           +G+ S+ +QFELDQR+FLL+RK+
Sbjct: 123 RGEASHVSQFELDQRLFLLMRKL 145


>ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [Sorghum bicolor]
           gi|241917379|gb|EER90523.1| hypothetical protein
           SORBIDRAFT_01g001420 [Sorghum bicolor]
          Length = 145

 Score =  216 bits (549), Expect = 7e-54
 Identities = 104/146 (71%), Positives = 123/146 (84%)
 Frame = +3

Query: 84  MVELLFEDIFTLTKIDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEIYPLHVGDKFTMVL 263
           M E LFED F + ++DPDGKKFD+VSR+EARSEQ  M+M LDV T++YP+   +KF MVL
Sbjct: 1   MSEHLFEDTFVVNRLDPDGKKFDRVSRVEARSEQLAMYMQLDVATDVYPMQPNEKFNMVL 60

Query: 264 SPTLNLDGTPDTGYFLQGNRKSLADKFEYVMHGKLYKISEEASGGQNIKVEIYASFGGLL 443
           +PTLNLDGTPDTGY+ Q  RK+LAD +EYVMHGKLYKISE+ S  QN KVEIYASFGGLL
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADNYEYVMHGKLYKISEDTS-SQNAKVEIYASFGGLL 119

Query: 444 MMLKGDPSNAAQFELDQRVFLLIRKV 521
           M+L+GDPS AA FELDQR+FLL+RKV
Sbjct: 120 MLLRGDPSTAASFELDQRLFLLMRKV 145


>ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide,
           putative [Ricinus communis] gi|223530164|gb|EEF32075.1|
           DNA-directed RNA polymerases I, II, and III 17.1 kDa
           polypeptide, putative [Ricinus communis]
          Length = 146

 Score =  216 bits (549), Expect = 7e-54
 Identities = 103/143 (72%), Positives = 125/143 (87%)
 Frame = +3

Query: 93  LLFEDIFTLTKIDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEIYPLHVGDKFTMVLSPT 272
           +LFEDIF + K+DPDGKKFDKVSRIEA S+  DMFMHLDVNTEIYP+ VGDKFTM L+ T
Sbjct: 5   VLFEDIFVVDKLDPDGKKFDKVSRIEAHSQNCDMFMHLDVNTEIYPMAVGDKFTMALAHT 64

Query: 273 LNLDGTPDTGYFLQGNRKSLADKFEYVMHGKLYKISEEASGGQNIKVEIYASFGGLLMML 452
           LNLDGTPDTGY+ QG RK+LADK+EY+M+GKLYKISEE S G+ +K E+  S+GGLLM+L
Sbjct: 65  LNLDGTPDTGYYTQGARKTLADKYEYIMNGKLYKISEEGS-GKAVKAEMLVSYGGLLMLL 123

Query: 453 KGDPSNAAQFELDQRVFLLIRKV 521
           +GDPS+ + FELDQR+FLL+RK+
Sbjct: 124 RGDPSHVSHFELDQRLFLLMRKL 146