BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00008722
         (485 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS47149.1| DNA-directed RNA polymerase II subunit RPB1 [Trit...    55   1e-05

>gb|EMS47149.1| DNA-directed RNA polymerase II subunit RPB1 [Triticum urartu]
          Length = 1846

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 8/106 (7%)
 Frame = +2

Query: 8    PNFAIIQSDLSFIQSYVAGV*PNISRLQPYF-------SQLQSYISFLQSHIS*LQSF-S 163
            P F  +  D++ +Q Y   + P+++ LQPYF       ++LQ Y++ L   ++ LQ + +
Sbjct: 1721 PYFTKLLPDVTELQPYFTELLPDVTELQPYFTELLPDVTELQPYLTELLPEVTELQPYVT 1780

Query: 164  KIQSFTCILT*QPKVVSL*PIRSIVSKLQSNLTIVFTNISFILTCK 301
             +QSFTC+ + QPK     PI+S  SKLQ  L  +  +++ I T K
Sbjct: 1781 FVQSFTCLFSKQPKDDE--PIQSSSSKLQPCLADLLAHLTIICTTK 1824