BLASTX nr result
ID: Zingiber23_contig00008657
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00008657
(274 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266276.1| PREDICTED: serine hydroxymethyltransferase 1... 188 7e-46
gb|EOY05145.1| Serine hydroxymethyltransferase 4 isoform 2 [Theo... 187 1e-45
gb|EOY05144.1| Serine hydroxymethyltransferase 4 isoform 1 [Theo... 187 1e-45
ref|XP_004138967.1| PREDICTED: serine hydroxymethyltransferase 1... 187 1e-45
gb|EMJ24129.1| hypothetical protein PRUPE_ppa005242mg [Prunus pe... 186 2e-45
ref|XP_002522806.1| serine hydroxymethyltransferase, putative [R... 186 2e-45
ref|XP_004296982.1| PREDICTED: serine hydroxymethyltransferase 1... 186 3e-45
gb|ABO61376.1| serine hydroxymethyltransferase [Populus tremuloi... 186 4e-45
gb|ACJ11726.1| serine hydroxymethyltransferase [Gossypium hirsutum] 185 5e-45
ref|XP_006663976.1| PREDICTED: serine hydroxymethyltransferase 4... 184 8e-45
ref|XP_002298678.2| hypothetical protein POPTR_0001s32770g [Popu... 184 8e-45
ref|XP_002328910.1| serine hydroxymethyltransferase 6 [Populus t... 184 8e-45
gb|ABK92558.1| unknown [Populus trichocarpa] 184 8e-45
gb|ABK94226.1| unknown [Populus trichocarpa] 184 8e-45
ref|XP_006492539.1| PREDICTED: serine hydroxymethyltransferase 4... 184 1e-44
ref|XP_006421019.1| hypothetical protein CICLE_v10004902mg [Citr... 184 1e-44
emb|CCC55430.1| cytosolic serine hydroxymethyltransferase [Pinus... 184 1e-44
gb|ABR16576.1| unknown [Picea sitchensis] gi|224284647|gb|ACN400... 184 1e-44
ref|XP_004239849.1| PREDICTED: serine hydroxymethyltransferase 1... 183 2e-44
gb|ABO61381.1| serine hydroxymethyltransferase [Populus tremuloi... 183 2e-44
>ref|XP_002266276.1| PREDICTED: serine hydroxymethyltransferase 1 [Vitis vinifera]
Length = 471
Score = 188 bits (477), Expect = 7e-46
Identities = 87/90 (96%), Positives = 90/90 (100%)
Frame = +3
Query: 3 LEEKALDFRPKLIICGGSAYPRDWDYARFRSIADKCGALLLCDMAHISGLVAAQEAANPF 182
LEEKALDFRPKLIICGGSAYPRDWDYARFRSIADKCGALLLCDMAHISGLVAAQEAANPF
Sbjct: 173 LEEKALDFRPKLIICGGSAYPRDWDYARFRSIADKCGALLLCDMAHISGLVAAQEAANPF 232
Query: 183 EFCDVVTTTTHKSLRGPRSGMIFYRKGPKP 272
E+CD+VTTTTHKSLRGPR+GMIFYRKGPKP
Sbjct: 233 EYCDIVTTTTHKSLRGPRAGMIFYRKGPKP 262
>gb|EOY05145.1| Serine hydroxymethyltransferase 4 isoform 2 [Theobroma cacao]
Length = 412
Score = 187 bits (476), Expect = 1e-45
Identities = 86/90 (95%), Positives = 90/90 (100%)
Frame = +3
Query: 3 LEEKALDFRPKLIICGGSAYPRDWDYARFRSIADKCGALLLCDMAHISGLVAAQEAANPF 182
LEEKALDFRPKLIICGGSAYPRDWDYARFR++ADKCGALLLCDMAHISGLVAAQEAANPF
Sbjct: 111 LEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF 170
Query: 183 EFCDVVTTTTHKSLRGPRSGMIFYRKGPKP 272
EFCD+VTTTTHKSLRGPR+GMIFYRKGPKP
Sbjct: 171 EFCDIVTTTTHKSLRGPRAGMIFYRKGPKP 200
>gb|EOY05144.1| Serine hydroxymethyltransferase 4 isoform 1 [Theobroma cacao]
Length = 471
Score = 187 bits (476), Expect = 1e-45
Identities = 86/90 (95%), Positives = 90/90 (100%)
Frame = +3
Query: 3 LEEKALDFRPKLIICGGSAYPRDWDYARFRSIADKCGALLLCDMAHISGLVAAQEAANPF 182
LEEKALDFRPKLIICGGSAYPRDWDYARFR++ADKCGALLLCDMAHISGLVAAQEAANPF
Sbjct: 173 LEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF 232
Query: 183 EFCDVVTTTTHKSLRGPRSGMIFYRKGPKP 272
EFCD+VTTTTHKSLRGPR+GMIFYRKGPKP
Sbjct: 233 EFCDIVTTTTHKSLRGPRAGMIFYRKGPKP 262
>ref|XP_004138967.1| PREDICTED: serine hydroxymethyltransferase 1-like [Cucumis sativus]
gi|449505277|ref|XP_004162423.1| PREDICTED: serine
hydroxymethyltransferase 1-like [Cucumis sativus]
Length = 471
Score = 187 bits (475), Expect = 1e-45
Identities = 87/90 (96%), Positives = 90/90 (100%)
Frame = +3
Query: 3 LEEKALDFRPKLIICGGSAYPRDWDYARFRSIADKCGALLLCDMAHISGLVAAQEAANPF 182
LEEKALDFRPKLIICGGSAYPRDWDYARFR+IADKCGALLLCDMAHISGLVAAQEAANPF
Sbjct: 173 LEEKALDFRPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPF 232
Query: 183 EFCDVVTTTTHKSLRGPRSGMIFYRKGPKP 272
E+CDVVTTTTHKSLRGPR+GMIFYRKGPKP
Sbjct: 233 EYCDVVTTTTHKSLRGPRAGMIFYRKGPKP 262
>gb|EMJ24129.1| hypothetical protein PRUPE_ppa005242mg [Prunus persica]
Length = 471
Score = 186 bits (473), Expect = 2e-45
Identities = 85/90 (94%), Positives = 90/90 (100%)
Frame = +3
Query: 3 LEEKALDFRPKLIICGGSAYPRDWDYARFRSIADKCGALLLCDMAHISGLVAAQEAANPF 182
LEEKALDFRP+LIICGGSAYPRDWDYARFRS+ADKCGALLLCDMAHISGLVAAQEAANPF
Sbjct: 173 LEEKALDFRPRLIICGGSAYPRDWDYARFRSVADKCGALLLCDMAHISGLVAAQEAANPF 232
Query: 183 EFCDVVTTTTHKSLRGPRSGMIFYRKGPKP 272
E+CD+VTTTTHKSLRGPR+GMIFYRKGPKP
Sbjct: 233 EYCDIVTTTTHKSLRGPRAGMIFYRKGPKP 262
>ref|XP_002522806.1| serine hydroxymethyltransferase, putative [Ricinus communis]
gi|223538044|gb|EEF39657.1| serine
hydroxymethyltransferase, putative [Ricinus communis]
Length = 471
Score = 186 bits (473), Expect = 2e-45
Identities = 85/90 (94%), Positives = 90/90 (100%)
Frame = +3
Query: 3 LEEKALDFRPKLIICGGSAYPRDWDYARFRSIADKCGALLLCDMAHISGLVAAQEAANPF 182
LEEKALDFRP+LIICGGSAYPRDWDYA+FRS+ADKCGALLLCDMAHISGLVAAQEAANPF
Sbjct: 173 LEEKALDFRPRLIICGGSAYPRDWDYAKFRSVADKCGALLLCDMAHISGLVAAQEAANPF 232
Query: 183 EFCDVVTTTTHKSLRGPRSGMIFYRKGPKP 272
EFCD+VTTTTHKSLRGPR+GMIFYRKGPKP
Sbjct: 233 EFCDIVTTTTHKSLRGPRAGMIFYRKGPKP 262
>ref|XP_004296982.1| PREDICTED: serine hydroxymethyltransferase 1-like [Fragaria vesca
subsp. vesca]
Length = 471
Score = 186 bits (472), Expect = 3e-45
Identities = 85/90 (94%), Positives = 89/90 (98%)
Frame = +3
Query: 3 LEEKALDFRPKLIICGGSAYPRDWDYARFRSIADKCGALLLCDMAHISGLVAAQEAANPF 182
LEEKALDFRP+LIICGGSAYPRDWDYARFRS+ADKCGALLLCDMAHISGLV AQEAANPF
Sbjct: 173 LEEKALDFRPRLIICGGSAYPRDWDYARFRSVADKCGALLLCDMAHISGLVCAQEAANPF 232
Query: 183 EFCDVVTTTTHKSLRGPRSGMIFYRKGPKP 272
EFCD+VTTTTHKSLRGPR+GMIFYRKGPKP
Sbjct: 233 EFCDIVTTTTHKSLRGPRAGMIFYRKGPKP 262
>gb|ABO61376.1| serine hydroxymethyltransferase [Populus tremuloides]
Length = 471
Score = 186 bits (471), Expect = 4e-45
Identities = 85/90 (94%), Positives = 89/90 (98%)
Frame = +3
Query: 3 LEEKALDFRPKLIICGGSAYPRDWDYARFRSIADKCGALLLCDMAHISGLVAAQEAANPF 182
LEEKALDFRPKLIICGGSAYPRDWDY RFRS+ADKCGALLLCDMAHISGLVAAQEAANPF
Sbjct: 173 LEEKALDFRPKLIICGGSAYPRDWDYKRFRSVADKCGALLLCDMAHISGLVAAQEAANPF 232
Query: 183 EFCDVVTTTTHKSLRGPRSGMIFYRKGPKP 272
E+CD+VTTTTHKSLRGPR+GMIFYRKGPKP
Sbjct: 233 EYCDIVTTTTHKSLRGPRAGMIFYRKGPKP 262
>gb|ACJ11726.1| serine hydroxymethyltransferase [Gossypium hirsutum]
Length = 471
Score = 185 bits (470), Expect = 5e-45
Identities = 85/90 (94%), Positives = 89/90 (98%)
Frame = +3
Query: 3 LEEKALDFRPKLIICGGSAYPRDWDYARFRSIADKCGALLLCDMAHISGLVAAQEAANPF 182
LEEKALDFRPKLIICGGSAYPRDWDYARFR++ADKCGALLLCDMAHISGLVAAQEA NPF
Sbjct: 173 LEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEANNPF 232
Query: 183 EFCDVVTTTTHKSLRGPRSGMIFYRKGPKP 272
EFCD+VTTTTHKSLRGPR+GMIFYRKGPKP
Sbjct: 233 EFCDIVTTTTHKSLRGPRAGMIFYRKGPKP 262
>ref|XP_006663976.1| PREDICTED: serine hydroxymethyltransferase 4-like [Oryza
brachyantha]
Length = 424
Score = 184 bits (468), Expect = 8e-45
Identities = 85/90 (94%), Positives = 89/90 (98%)
Frame = +3
Query: 3 LEEKALDFRPKLIICGGSAYPRDWDYARFRSIADKCGALLLCDMAHISGLVAAQEAANPF 182
LEEKA+DFRPKLIICGGSAYPRDWDYA FR+IADKCGA+LLCDMAHISGLVAAQEAANPF
Sbjct: 126 LEEKAMDFRPKLIICGGSAYPRDWDYASFRAIADKCGAMLLCDMAHISGLVAAQEAANPF 185
Query: 183 EFCDVVTTTTHKSLRGPRSGMIFYRKGPKP 272
E+CDVVTTTTHKSLRGPRSGMIFYRKGPKP
Sbjct: 186 EYCDVVTTTTHKSLRGPRSGMIFYRKGPKP 215
>ref|XP_002298678.2| hypothetical protein POPTR_0001s32770g [Populus trichocarpa]
gi|550348730|gb|EEE83483.2| hypothetical protein
POPTR_0001s32770g [Populus trichocarpa]
Length = 409
Score = 184 bits (468), Expect = 8e-45
Identities = 84/90 (93%), Positives = 89/90 (98%)
Frame = +3
Query: 3 LEEKALDFRPKLIICGGSAYPRDWDYARFRSIADKCGALLLCDMAHISGLVAAQEAANPF 182
LEEKALDFRPKLIICGGSAYPRDWDY +FRS+ADKCGALLLCDMAHISGLVAAQEAANPF
Sbjct: 111 LEEKALDFRPKLIICGGSAYPRDWDYKKFRSVADKCGALLLCDMAHISGLVAAQEAANPF 170
Query: 183 EFCDVVTTTTHKSLRGPRSGMIFYRKGPKP 272
E+CD+VTTTTHKSLRGPR+GMIFYRKGPKP
Sbjct: 171 EYCDIVTTTTHKSLRGPRAGMIFYRKGPKP 200
>ref|XP_002328910.1| serine hydroxymethyltransferase 6 [Populus trichocarpa]
gi|566212213|ref|XP_006373089.1| SERINE
HYDROXYMETHYLTRANSFERASE 4 family protein [Populus
trichocarpa] gi|550319795|gb|ERP50886.1| SERINE
HYDROXYMETHYLTRANSFERASE 4 family protein [Populus
trichocarpa]
Length = 471
Score = 184 bits (468), Expect = 8e-45
Identities = 84/90 (93%), Positives = 89/90 (98%)
Frame = +3
Query: 3 LEEKALDFRPKLIICGGSAYPRDWDYARFRSIADKCGALLLCDMAHISGLVAAQEAANPF 182
LEEKALDFRPKLIICGGSAYPRDWDY +FRS+ADKCGALLLCDMAHISGLVAAQEAANPF
Sbjct: 173 LEEKALDFRPKLIICGGSAYPRDWDYKKFRSVADKCGALLLCDMAHISGLVAAQEAANPF 232
Query: 183 EFCDVVTTTTHKSLRGPRSGMIFYRKGPKP 272
E+CD+VTTTTHKSLRGPR+GMIFYRKGPKP
Sbjct: 233 EYCDIVTTTTHKSLRGPRAGMIFYRKGPKP 262
>gb|ABK92558.1| unknown [Populus trichocarpa]
Length = 471
Score = 184 bits (468), Expect = 8e-45
Identities = 84/90 (93%), Positives = 89/90 (98%)
Frame = +3
Query: 3 LEEKALDFRPKLIICGGSAYPRDWDYARFRSIADKCGALLLCDMAHISGLVAAQEAANPF 182
LEEKALDFRPKLIICGGSAYPRDWDY +FRS+ADKCGALLLCDMAHISGLVAAQEAANPF
Sbjct: 173 LEEKALDFRPKLIICGGSAYPRDWDYKKFRSVADKCGALLLCDMAHISGLVAAQEAANPF 232
Query: 183 EFCDVVTTTTHKSLRGPRSGMIFYRKGPKP 272
E+CD+VTTTTHKSLRGPR+GMIFYRKGPKP
Sbjct: 233 EYCDIVTTTTHKSLRGPRAGMIFYRKGPKP 262
>gb|ABK94226.1| unknown [Populus trichocarpa]
Length = 471
Score = 184 bits (468), Expect = 8e-45
Identities = 84/90 (93%), Positives = 89/90 (98%)
Frame = +3
Query: 3 LEEKALDFRPKLIICGGSAYPRDWDYARFRSIADKCGALLLCDMAHISGLVAAQEAANPF 182
LEEKALDFRPKLIICGGSAYPRDWDY +FRS+ADKCGALLLCDMAHISGLVAAQEAANPF
Sbjct: 173 LEEKALDFRPKLIICGGSAYPRDWDYKKFRSVADKCGALLLCDMAHISGLVAAQEAANPF 232
Query: 183 EFCDVVTTTTHKSLRGPRSGMIFYRKGPKP 272
E+CD+VTTTTHKSLRGPR+GMIFYRKGPKP
Sbjct: 233 EYCDIVTTTTHKSLRGPRAGMIFYRKGPKP 262
>ref|XP_006492539.1| PREDICTED: serine hydroxymethyltransferase 4-like [Citrus sinensis]
Length = 471
Score = 184 bits (466), Expect = 1e-44
Identities = 84/90 (93%), Positives = 89/90 (98%)
Frame = +3
Query: 3 LEEKALDFRPKLIICGGSAYPRDWDYARFRSIADKCGALLLCDMAHISGLVAAQEAANPF 182
LEEKALDFRPKLIICGGSAYPRDWDYARFR++ADKCGALLLCDMAHISGLVAAQEAANPF
Sbjct: 173 LEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF 232
Query: 183 EFCDVVTTTTHKSLRGPRSGMIFYRKGPKP 272
E+C +VTTTTHKSLRGPR+GMIFYRKGPKP
Sbjct: 233 EYCHIVTTTTHKSLRGPRAGMIFYRKGPKP 262
>ref|XP_006421019.1| hypothetical protein CICLE_v10004902mg [Citrus clementina]
gi|557522892|gb|ESR34259.1| hypothetical protein
CICLE_v10004902mg [Citrus clementina]
Length = 471
Score = 184 bits (466), Expect = 1e-44
Identities = 84/90 (93%), Positives = 89/90 (98%)
Frame = +3
Query: 3 LEEKALDFRPKLIICGGSAYPRDWDYARFRSIADKCGALLLCDMAHISGLVAAQEAANPF 182
LEEKALDFRPKLIICGGSAYPRDWDYARFR++ADKCGALLLCDMAHISGLVAAQEAANPF
Sbjct: 173 LEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF 232
Query: 183 EFCDVVTTTTHKSLRGPRSGMIFYRKGPKP 272
E+C +VTTTTHKSLRGPR+GMIFYRKGPKP
Sbjct: 233 EYCHIVTTTTHKSLRGPRAGMIFYRKGPKP 262
>emb|CCC55430.1| cytosolic serine hydroxymethyltransferase [Pinus pinaster]
Length = 470
Score = 184 bits (466), Expect = 1e-44
Identities = 84/90 (93%), Positives = 89/90 (98%)
Frame = +3
Query: 3 LEEKALDFRPKLIICGGSAYPRDWDYARFRSIADKCGALLLCDMAHISGLVAAQEAANPF 182
LEEKALDFRPKLIICGGSAYPRDWDYARFRSIADKCGA+LLCDMAHISGLVAAQEA NPF
Sbjct: 173 LEEKALDFRPKLIICGGSAYPRDWDYARFRSIADKCGAMLLCDMAHISGLVAAQEAGNPF 232
Query: 183 EFCDVVTTTTHKSLRGPRSGMIFYRKGPKP 272
++CD+VTTTTHKSLRGPR+GMIFYRKGPKP
Sbjct: 233 DYCDLVTTTTHKSLRGPRAGMIFYRKGPKP 262
>gb|ABR16576.1| unknown [Picea sitchensis] gi|224284647|gb|ACN40056.1| unknown
[Picea sitchensis]
Length = 470
Score = 184 bits (466), Expect = 1e-44
Identities = 84/90 (93%), Positives = 89/90 (98%)
Frame = +3
Query: 3 LEEKALDFRPKLIICGGSAYPRDWDYARFRSIADKCGALLLCDMAHISGLVAAQEAANPF 182
LEEKALDFRPKLIICGGSAYPRDWDYARFRSIADKCGA+LLCDMAHISGLVAAQEA NPF
Sbjct: 173 LEEKALDFRPKLIICGGSAYPRDWDYARFRSIADKCGAMLLCDMAHISGLVAAQEAGNPF 232
Query: 183 EFCDVVTTTTHKSLRGPRSGMIFYRKGPKP 272
++CD+VTTTTHKSLRGPR+GMIFYRKGPKP
Sbjct: 233 DYCDLVTTTTHKSLRGPRAGMIFYRKGPKP 262
>ref|XP_004239849.1| PREDICTED: serine hydroxymethyltransferase 1-like [Solanum
lycopersicum]
Length = 471
Score = 183 bits (465), Expect = 2e-44
Identities = 84/90 (93%), Positives = 88/90 (97%)
Frame = +3
Query: 3 LEEKALDFRPKLIICGGSAYPRDWDYARFRSIADKCGALLLCDMAHISGLVAAQEAANPF 182
LEEKALDFRPKLIICGGSAYPRDWDY RFR +ADKCGALLLCDMAHISGLVAAQEAANPF
Sbjct: 173 LEEKALDFRPKLIICGGSAYPRDWDYKRFREVADKCGALLLCDMAHISGLVAAQEAANPF 232
Query: 183 EFCDVVTTTTHKSLRGPRSGMIFYRKGPKP 272
E+CD+VTTTTHKSLRGPR+GMIFYRKGPKP
Sbjct: 233 EYCDLVTTTTHKSLRGPRAGMIFYRKGPKP 262
>gb|ABO61381.1| serine hydroxymethyltransferase [Populus tremuloides]
Length = 471
Score = 183 bits (464), Expect = 2e-44
Identities = 83/89 (93%), Positives = 88/89 (98%)
Frame = +3
Query: 6 EEKALDFRPKLIICGGSAYPRDWDYARFRSIADKCGALLLCDMAHISGLVAAQEAANPFE 185
EEKALDFRPKLIICGGSAYPRDWDY +FRS+ADKCGALLLCDMAHISGLVAAQEAANPFE
Sbjct: 174 EEKALDFRPKLIICGGSAYPRDWDYKKFRSVADKCGALLLCDMAHISGLVAAQEAANPFE 233
Query: 186 FCDVVTTTTHKSLRGPRSGMIFYRKGPKP 272
+CD+VTTTTHKSLRGPR+GMIFYRKGPKP
Sbjct: 234 YCDIVTTTTHKSLRGPRAGMIFYRKGPKP 262