BLASTX nr result
ID: Zingiber23_contig00008550
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00008550
(207 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003558846.1| PREDICTED: U-box domain-containing protein 7... 96 6e-18
ref|XP_002464506.1| hypothetical protein SORBIDRAFT_01g019790 [S... 94 2e-17
ref|NP_001150622.1| pre-mRNA-splicing factor 19 [Zea mays] gi|19... 93 3e-17
ref|XP_004982929.1| PREDICTED: U-box domain-containing protein 7... 93 4e-17
gb|EMT10525.1| DEAD-box ATP-dependent RNA helicase 29 [Aegilops ... 92 9e-17
gb|EMS55665.1| U-box domain-containing protein 72 [Triticum urartu] 92 9e-17
ref|NP_001130751.1| uncharacterized protein LOC100191855 [Zea ma... 91 1e-16
ref|XP_004296409.1| PREDICTED: U-box domain-containing protein 7... 91 2e-16
ref|XP_003574025.1| PREDICTED: U-box domain-containing protein 7... 91 2e-16
gb|EXB37496.1| U-box domain-containing protein 72 [Morus notabilis] 90 3e-16
ref|XP_006410473.1| hypothetical protein EUTSA_v10016510mg [Eutr... 90 4e-16
ref|XP_006410472.1| hypothetical protein EUTSA_v10016510mg [Eutr... 90 4e-16
ref|XP_006294009.1| hypothetical protein CARUB_v10022997mg [Caps... 89 5e-16
gb|EMS65878.1| U-box domain-containing protein 72 [Triticum urartu] 89 5e-16
ref|XP_006661845.1| PREDICTED: U-box domain-containing protein 7... 89 8e-16
gb|EMT29935.1| hypothetical protein F775_26662 [Aegilops tauschii] 89 8e-16
ref|NP_850206.4| U-box protein MAC3B [Arabidopsis thaliana] gi|2... 89 8e-16
gb|EEC67131.1| hypothetical protein OsI_33953 [Oryza sativa Indi... 88 1e-15
gb|ABR25746.1| pre-mRNA-splicing factor 19 [Oryza sativa Indica ... 88 1e-15
ref|XP_002285452.1| PREDICTED: U-box domain-containing protein 7... 87 2e-15
>ref|XP_003558846.1| PREDICTED: U-box domain-containing protein 72-like [Brachypodium
distachyon]
Length = 527
Score = 95.5 bits (236), Expect = 6e-18
Identities = 44/58 (75%), Positives = 52/58 (89%), Gaps = 1/58 (1%)
Frame = +3
Query: 3 VKQEWNLIKTFPDLSGAGKITSVKFGADARYMAVGSMDRNLRIFGIPGNER-EDPKSP 173
VK EWNL+KT PDLSG GK+TSVKFG DA+Y+AVGSMDRNLRIFG+PG+E+ E+ KSP
Sbjct: 467 VKMEWNLVKTLPDLSGTGKVTSVKFGTDAKYVAVGSMDRNLRIFGLPGDEQMEEAKSP 524
>ref|XP_002464506.1| hypothetical protein SORBIDRAFT_01g019790 [Sorghum bicolor]
gi|241918360|gb|EER91504.1| hypothetical protein
SORBIDRAFT_01g019790 [Sorghum bicolor]
Length = 535
Score = 93.6 bits (231), Expect = 2e-17
Identities = 42/58 (72%), Positives = 51/58 (87%)
Frame = +3
Query: 3 VKQEWNLIKTFPDLSGAGKITSVKFGADARYMAVGSMDRNLRIFGIPGNEREDPKSPA 176
VK EWNLIKT PDLSG GK+TSVKFGADA+Y+AVGSMDRNLRIFG+PG+++ + + A
Sbjct: 476 VKSEWNLIKTLPDLSGTGKVTSVKFGADAKYIAVGSMDRNLRIFGLPGDDQMEESNTA 533
>ref|NP_001150622.1| pre-mRNA-splicing factor 19 [Zea mays] gi|195640644|gb|ACG39790.1|
pre-mRNA-splicing factor 19 [Zea mays]
gi|224030373|gb|ACN34262.1| unknown [Zea mays]
gi|414871140|tpg|DAA49697.1| TPA: pre-mRNA-splicing
factor 19 isoform 1 [Zea mays]
gi|414871141|tpg|DAA49698.1| TPA: pre-mRNA-splicing
factor 19 isoform 2 [Zea mays]
Length = 526
Score = 93.2 bits (230), Expect = 3e-17
Identities = 42/58 (72%), Positives = 51/58 (87%)
Frame = +3
Query: 3 VKQEWNLIKTFPDLSGAGKITSVKFGADARYMAVGSMDRNLRIFGIPGNEREDPKSPA 176
VK EWNLIKT PDLSG GK+TSVKFGADA+Y+AVGSMDRNLRIFG+PG+++ + + A
Sbjct: 467 VKAEWNLIKTLPDLSGTGKVTSVKFGADAKYIAVGSMDRNLRIFGLPGDDQMEESTTA 524
>ref|XP_004982929.1| PREDICTED: U-box domain-containing protein 72-like [Setaria
italica]
Length = 526
Score = 92.8 bits (229), Expect = 4e-17
Identities = 42/58 (72%), Positives = 51/58 (87%)
Frame = +3
Query: 3 VKQEWNLIKTFPDLSGAGKITSVKFGADARYMAVGSMDRNLRIFGIPGNEREDPKSPA 176
VK EWNLIKT PDLSG GK+TSVKFGADA+Y+AVGSMDRNLRIFG+PG+++ + + A
Sbjct: 467 VKVEWNLIKTLPDLSGTGKVTSVKFGADAKYIAVGSMDRNLRIFGLPGDDQMEESNTA 524
>gb|EMT10525.1| DEAD-box ATP-dependent RNA helicase 29 [Aegilops tauschii]
Length = 1295
Score = 91.7 bits (226), Expect = 9e-17
Identities = 42/57 (73%), Positives = 51/57 (89%), Gaps = 1/57 (1%)
Frame = +3
Query: 3 VKQEWNLIKTFPDLSGAGKITSVKFGADARYMAVGSMDRNLRIFGIPGNER-EDPKS 170
VK EWNL+KT PDLSG GK+TSVKFGADA+Y+AVGSMD NLR+FG+PG+E+ E+ KS
Sbjct: 1234 VKTEWNLVKTLPDLSGTGKVTSVKFGADAKYVAVGSMDHNLRVFGLPGDEQMEEAKS 1290
>gb|EMS55665.1| U-box domain-containing protein 72 [Triticum urartu]
Length = 588
Score = 91.7 bits (226), Expect = 9e-17
Identities = 42/57 (73%), Positives = 51/57 (89%), Gaps = 1/57 (1%)
Frame = +3
Query: 3 VKQEWNLIKTFPDLSGAGKITSVKFGADARYMAVGSMDRNLRIFGIPGNER-EDPKS 170
VK EWNL+KT PDLSG GK+TSVKFGADA+Y+AVGSMD NLR+FG+PG+E+ E+ KS
Sbjct: 527 VKTEWNLVKTLPDLSGTGKVTSVKFGADAKYVAVGSMDHNLRVFGLPGDEQMEEAKS 583
>ref|NP_001130751.1| uncharacterized protein LOC100191855 [Zea mays]
gi|194690018|gb|ACF79093.1| unknown [Zea mays]
gi|413934082|gb|AFW68633.1| hypothetical protein
ZEAMMB73_254634 [Zea mays]
Length = 526
Score = 91.3 bits (225), Expect = 1e-16
Identities = 40/58 (68%), Positives = 50/58 (86%)
Frame = +3
Query: 3 VKQEWNLIKTFPDLSGAGKITSVKFGADARYMAVGSMDRNLRIFGIPGNEREDPKSPA 176
VK EWNLIKT PDLSG GK+TSVKFG DA+Y+A+GSMDRNLRIFG+PG+++ + + A
Sbjct: 467 VKAEWNLIKTLPDLSGTGKVTSVKFGVDAKYIAIGSMDRNLRIFGLPGDDQMEESNTA 524
>ref|XP_004296409.1| PREDICTED: U-box domain-containing protein 72-like [Fragaria vesca
subsp. vesca]
Length = 523
Score = 90.5 bits (223), Expect = 2e-16
Identities = 41/52 (78%), Positives = 46/52 (88%)
Frame = +3
Query: 3 VKQEWNLIKTFPDLSGAGKITSVKFGADARYMAVGSMDRNLRIFGIPGNERE 158
VKQEWN IKTFPD+SG GK TSVKFG DA+Y+AVGSMDRNLRIFG+PG + E
Sbjct: 469 VKQEWNTIKTFPDMSGTGKATSVKFGPDAKYIAVGSMDRNLRIFGLPGKDVE 520
>ref|XP_003574025.1| PREDICTED: U-box domain-containing protein 72-like [Brachypodium
distachyon]
Length = 527
Score = 90.5 bits (223), Expect = 2e-16
Identities = 40/53 (75%), Positives = 47/53 (88%)
Frame = +3
Query: 3 VKQEWNLIKTFPDLSGAGKITSVKFGADARYMAVGSMDRNLRIFGIPGNERED 161
VK EWNLIKT PDLSG GK+TS KFGAD++Y+AVGSMDRNLRIFG+PG ++ D
Sbjct: 467 VKTEWNLIKTLPDLSGTGKVTSAKFGADSKYIAVGSMDRNLRIFGLPGEDQMD 519
>gb|EXB37496.1| U-box domain-containing protein 72 [Morus notabilis]
Length = 572
Score = 90.1 bits (222), Expect = 3e-16
Identities = 40/49 (81%), Positives = 45/49 (91%)
Frame = +3
Query: 3 VKQEWNLIKTFPDLSGAGKITSVKFGADARYMAVGSMDRNLRIFGIPGN 149
VK EWN IKTFPDLSG GK+TSVKFG DA+Y+AVGSMDRNLRIFG+PG+
Sbjct: 518 VKSEWNCIKTFPDLSGTGKVTSVKFGPDAKYLAVGSMDRNLRIFGLPGD 566
>ref|XP_006410473.1| hypothetical protein EUTSA_v10016510mg [Eutrema salsugineum]
gi|557111642|gb|ESQ51926.1| hypothetical protein
EUTSA_v10016510mg [Eutrema salsugineum]
Length = 525
Score = 89.7 bits (221), Expect = 4e-16
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = +3
Query: 3 VKQEWNLIKTFPDLSGAGKITSVKFGADARYMAVGSMDRNLRIFGIPGNERED 161
VK EWNLIKT PDLSG GK T VKFG DA+Y+AVGSMDRNLRIFG+PG+E+ D
Sbjct: 464 VKAEWNLIKTLPDLSGTGKATCVKFGPDAQYVAVGSMDRNLRIFGLPGDEKAD 516
>ref|XP_006410472.1| hypothetical protein EUTSA_v10016510mg [Eutrema salsugineum]
gi|557111641|gb|ESQ51925.1| hypothetical protein
EUTSA_v10016510mg [Eutrema salsugineum]
Length = 522
Score = 89.7 bits (221), Expect = 4e-16
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = +3
Query: 3 VKQEWNLIKTFPDLSGAGKITSVKFGADARYMAVGSMDRNLRIFGIPGNERED 161
VK EWNLIKT PDLSG GK T VKFG DA+Y+AVGSMDRNLRIFG+PG+E+ D
Sbjct: 461 VKAEWNLIKTLPDLSGTGKATCVKFGPDAQYVAVGSMDRNLRIFGLPGDEKAD 513
>ref|XP_006294009.1| hypothetical protein CARUB_v10022997mg [Capsella rubella]
gi|482562717|gb|EOA26907.1| hypothetical protein
CARUB_v10022997mg [Capsella rubella]
Length = 525
Score = 89.4 bits (220), Expect = 5e-16
Identities = 40/51 (78%), Positives = 45/51 (88%)
Frame = +3
Query: 3 VKQEWNLIKTFPDLSGAGKITSVKFGADARYMAVGSMDRNLRIFGIPGNER 155
VK EWNL+KT PDLSG GK T VKFG DA+Y+AVGSMDRNLRIFG+PGNE+
Sbjct: 464 VKAEWNLVKTLPDLSGTGKATCVKFGQDAQYVAVGSMDRNLRIFGLPGNEK 514
>gb|EMS65878.1| U-box domain-containing protein 72 [Triticum urartu]
Length = 619
Score = 89.4 bits (220), Expect = 5e-16
Identities = 39/53 (73%), Positives = 47/53 (88%)
Frame = +3
Query: 3 VKQEWNLIKTFPDLSGAGKITSVKFGADARYMAVGSMDRNLRIFGIPGNERED 161
VK EWNLIKT PDLSG GK+TS KFG D++Y+AVGSMDRNLRIFG+PG+++ D
Sbjct: 559 VKTEWNLIKTLPDLSGTGKVTSAKFGTDSKYIAVGSMDRNLRIFGLPGDDQMD 611
>ref|XP_006661845.1| PREDICTED: U-box domain-containing protein 72-like [Oryza
brachyantha]
Length = 481
Score = 88.6 bits (218), Expect = 8e-16
Identities = 38/50 (76%), Positives = 47/50 (94%)
Frame = +3
Query: 3 VKQEWNLIKTFPDLSGAGKITSVKFGADARYMAVGSMDRNLRIFGIPGNE 152
VK EWNL+KT PDLSG G++T+VKFGADA+Y+AVGSMDRNLRIFG+PG++
Sbjct: 421 VKLEWNLVKTLPDLSGTGRVTNVKFGADAKYIAVGSMDRNLRIFGLPGDD 470
>gb|EMT29935.1| hypothetical protein F775_26662 [Aegilops tauschii]
Length = 245
Score = 88.6 bits (218), Expect = 8e-16
Identities = 40/53 (75%), Positives = 46/53 (86%)
Frame = +3
Query: 3 VKQEWNLIKTFPDLSGAGKITSVKFGADARYMAVGSMDRNLRIFGIPGNERED 161
VK EWNLIKT PDLSG GK+TS KFG DA+Y+AVGSMDRNLRIFG PG+++ D
Sbjct: 185 VKTEWNLIKTLPDLSGTGKVTSAKFGTDAKYIAVGSMDRNLRIFGPPGDDQMD 237
>ref|NP_850206.4| U-box protein MAC3B [Arabidopsis thaliana]
gi|240254574|ref|NP_850207.4| U-box protein MAC3B
[Arabidopsis thaliana]
gi|288558844|sp|O22785.3|PR19B_ARATH RecName:
Full=Pre-mRNA-processing factor 19 homolog 2; AltName:
Full=MOS4-associated complex protein 3B; Short=MAC
protein 3B; AltName: Full=Plant U-box protein 60;
AltName: Full=U-box domain-containing protein 60
gi|226222620|gb|ACO38702.1| truncated MOS4-associated
complex protein 3B [Arabidopsis thaliana]
gi|330253723|gb|AEC08817.1| U-box protein MAC3B
[Arabidopsis thaliana] gi|330253724|gb|AEC08818.1| U-box
protein MAC3B [Arabidopsis thaliana]
Length = 525
Score = 88.6 bits (218), Expect = 8e-16
Identities = 40/51 (78%), Positives = 46/51 (90%)
Frame = +3
Query: 3 VKQEWNLIKTFPDLSGAGKITSVKFGADARYMAVGSMDRNLRIFGIPGNER 155
VK EWNLIKT PDLSG GK T VKFG+DA+Y+AVGSMDRNLRIFG+PG+E+
Sbjct: 464 VKAEWNLIKTLPDLSGTGKATCVKFGSDAQYVAVGSMDRNLRIFGLPGDEK 514
>gb|EEC67131.1| hypothetical protein OsI_33953 [Oryza sativa Indica Group]
Length = 502
Score = 87.8 bits (216), Expect = 1e-15
Identities = 38/50 (76%), Positives = 45/50 (90%)
Frame = +3
Query: 3 VKQEWNLIKTFPDLSGAGKITSVKFGADARYMAVGSMDRNLRIFGIPGNE 152
VK EWNL+KT PDLSG GK+T+VKFG DA+Y+AVGSMDRNLRIFG+PG +
Sbjct: 442 VKLEWNLVKTLPDLSGTGKVTNVKFGTDAKYIAVGSMDRNLRIFGLPGED 491
>gb|ABR25746.1| pre-mRNA-splicing factor 19 [Oryza sativa Indica Group]
Length = 85
Score = 87.8 bits (216), Expect = 1e-15
Identities = 38/50 (76%), Positives = 45/50 (90%)
Frame = +3
Query: 3 VKQEWNLIKTFPDLSGAGKITSVKFGADARYMAVGSMDRNLRIFGIPGNE 152
VK EWNL+KT PDLSG GK+T+VKFG DA+Y+AVGSMDRNLRIFG+PG +
Sbjct: 25 VKLEWNLVKTLPDLSGTGKVTNVKFGTDAKYIAVGSMDRNLRIFGLPGED 74
>ref|XP_002285452.1| PREDICTED: U-box domain-containing protein 72 [Vitis vinifera]
gi|296083725|emb|CBI23714.3| unnamed protein product
[Vitis vinifera]
Length = 524
Score = 87.4 bits (215), Expect = 2e-15
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = +3
Query: 3 VKQEWNLIKTFPDLSGAGKITSVKFGADARYMAVGSMDRNLRIFGIPGNE 152
VK EWN IKTFPDLSG GK T VKFG DA+Y+AVGSMDRNLRIFG+PG++
Sbjct: 470 VKSEWNCIKTFPDLSGTGKATCVKFGPDAKYLAVGSMDRNLRIFGLPGDD 519