BLASTX nr result

ID: Zingiber23_contig00007360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00007360
         (772 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006437308.1| hypothetical protein CICLE_v10031118mg [Citr...    65   3e-08
gb|EMS51711.1| hypothetical protein TRIUR3_24202 [Triticum urartu]     57   9e-06

>ref|XP_006437308.1| hypothetical protein CICLE_v10031118mg [Citrus clementina]
           gi|568862608|ref|XP_006484771.1| PREDICTED: regulation
           of nuclear pre-mRNA domain-containing protein 1B-like
           [Citrus sinensis] gi|557539504|gb|ESR50548.1|
           hypothetical protein CICLE_v10031118mg [Citrus
           clementina]
          Length = 560

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
 Frame = -3

Query: 671 SLNSQVLSDGQAAFPLEKKPRLEKL-----ISTPDMGIHSYFSQAQPQQHQSIPFASQS- 510
           SLNS   + G + FP EK+P+LEK      +ST D+   +YFS  Q QQ  ++P    + 
Sbjct: 385 SLNSGGFTAGLSIFPPEKRPKLEKSTTASDVSTSDVANTTYFSPLQQQQVTNMPVVQSTS 444

Query: 509 ---------IQAXXXXXXXXXXXXXXXXPSLQQCAQTNGVTNMGPFPFP-GSSVLPPPLS 360
                    IQ+                P   Q  Q+ G+  +G  P+  G++ LPPP  
Sbjct: 445 MQPMSQVSQIQSQFAPAPPPPPPLSPATPPSSQYVQSTGMM-VGVMPYGFGANTLPPPPP 503

Query: 359 ---HASLGFTRXXXXXXXXXXXXPQQHQQSTSMGFYQSPGVGFYG 234
              H ++G  R             QQ Q + + G+Y+ PG+GFYG
Sbjct: 504 LPPHMAMGLARPSQSLQQPQPQQLQQQQPAATGGYYRPPGIGFYG 548


>gb|EMS51711.1| hypothetical protein TRIUR3_24202 [Triticum urartu]
          Length = 568

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 51/162 (31%), Positives = 68/162 (41%), Gaps = 23/162 (14%)
 Frame = -3

Query: 653 LSDGQAAFPLEKKPRLEKLISTPDMGIHSYFSQ-AQPQQHQSIP-------FASQSIQAX 498
           LS+G   F + K+PR+E    T DMG   +F Q  Q QQ+ + P        + Q+ QA 
Sbjct: 393 LSEGPPGFQIPKRPRIENPTQTGDMGAPPFFGQLLQAQQNGAAPTSLGGMQSSMQANQAL 452

Query: 497 XXXXXXXXXXXXXXXPSLQQCAQT-NGVTNMGPFPFPGSSVLPPPLSHASLGFTR----- 336
                          P LQQ +Q   G+  MGPF    SS+ PP  +    GF R     
Sbjct: 453 GAFAPLPPPLPPMLPPLLQQFSQNGGGMFGMGPFGMLASSMPPPLPNMLPPGFPRPSGPP 512

Query: 335 -XXXXXXXXXXXXPQQHQQS--------TSMGFYQSPGVGFY 237
                         QQ QQS        TS GF+ +PG+GF+
Sbjct: 513 PPPPLSPAQNQSQTQQQQQSPQAPQQSPTSTGFFPTPGIGFF 554


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