BLASTX nr result
ID: Zingiber23_contig00006736
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00006736
(381 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002308344.2| hypothetical protein POPTR_0006s21160g [Popu... 111 9e-23
ref|XP_006429954.1| hypothetical protein CICLE_v10011020mg [Citr... 107 2e-21
ref|XP_002531586.1| spliceosomal protein sap, putative [Ricinus ... 107 2e-21
gb|EXB29323.1| DNA damage-binding protein 1b [Morus notabilis] 105 6e-21
ref|XP_006481687.1| PREDICTED: uncharacterized protein LOC102624... 105 8e-21
ref|XP_006481685.1| PREDICTED: uncharacterized protein LOC102624... 105 8e-21
gb|EMJ05498.1| hypothetical protein PRUPE_ppa000262mg [Prunus pe... 105 8e-21
ref|XP_004170344.1| PREDICTED: uncharacterized protein LOC101227... 103 2e-20
ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-lik... 103 2e-20
ref|XP_006838801.1| hypothetical protein AMTR_s00002p00260810 [A... 102 7e-20
emb|CBI29964.3| unnamed protein product [Vitis vinifera] 102 7e-20
ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-lik... 102 7e-20
gb|EOY09620.1| Cleavage and polyadenylation specificity factor (... 101 9e-20
gb|EOY09618.1| Cleavage and polyadenylation specificity factor (... 101 9e-20
ref|XP_004303372.1| PREDICTED: pre-mRNA-splicing factor rse-1-li... 101 1e-19
ref|XP_006604688.1| PREDICTED: uncharacterized protein LOC100799... 100 2e-19
ref|XP_006604687.1| PREDICTED: uncharacterized protein LOC100799... 100 2e-19
ref|XP_006604686.1| PREDICTED: uncharacterized protein LOC100799... 100 2e-19
ref|XP_006351359.1| PREDICTED: pre-mRNA-splicing factor prp12-li... 99 6e-19
ref|XP_006351358.1| PREDICTED: pre-mRNA-splicing factor prp12-li... 99 6e-19
>ref|XP_002308344.2| hypothetical protein POPTR_0006s21160g [Populus trichocarpa]
gi|550336774|gb|EEE91867.2| hypothetical protein
POPTR_0006s21160g [Populus trichocarpa]
Length = 1397
Score = 111 bits (278), Expect = 9e-23
Identities = 54/73 (73%), Positives = 63/73 (86%)
Frame = +3
Query: 156 GVHYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQSVFG 335
GVHYLAK VLRGSAVLHA+ GHFRS +S DIVFGKETS+ELA I EDGI+Q+I EQ +FG
Sbjct: 30 GVHYLAKSVLRGSAVLHAIYGHFRSSFSYDIVFGKETSIELAIIGEDGIVQAICEQPLFG 89
Query: 336 TIKDIAVLPLKDR 374
TIKD+AV+P D+
Sbjct: 90 TIKDMAVVPWNDK 102
>ref|XP_006429954.1| hypothetical protein CICLE_v10011020mg [Citrus clementina]
gi|557532011|gb|ESR43194.1| hypothetical protein
CICLE_v10011020mg [Citrus clementina]
Length = 926
Score = 107 bits (267), Expect = 2e-21
Identities = 49/74 (66%), Positives = 59/74 (79%)
Frame = +3
Query: 153 RGVHYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQSVF 332
R +HYLAKCVL+GS VL GH RSP S D+VFGKETS+EL I EDGI+QS+ EQ+VF
Sbjct: 28 RNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVF 87
Query: 333 GTIKDIAVLPLKDR 374
GTIKD+AV+P D+
Sbjct: 88 GTIKDLAVVPWNDK 101
>ref|XP_002531586.1| spliceosomal protein sap, putative [Ricinus communis]
gi|223528782|gb|EEF30789.1| spliceosomal protein sap,
putative [Ricinus communis]
Length = 1220
Score = 107 bits (267), Expect = 2e-21
Identities = 52/71 (73%), Positives = 58/71 (81%)
Frame = +3
Query: 162 HYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQSVFGTI 341
HYLAKCVLRGS VL V GHFRSP S DIVFGKETS+EL I EDGI+QSI EQ VFGTI
Sbjct: 26 HYLAKCVLRGSVVLQVVYGHFRSPSSNDIVFGKETSIELVIIGEDGILQSICEQPVFGTI 85
Query: 342 KDIAVLPLKDR 374
KD+AV+P ++
Sbjct: 86 KDLAVIPWNEK 96
>gb|EXB29323.1| DNA damage-binding protein 1b [Morus notabilis]
Length = 1388
Score = 105 bits (262), Expect = 6e-21
Identities = 49/71 (69%), Positives = 58/71 (81%)
Frame = +3
Query: 162 HYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQSVFGTI 341
HYLAKCVLRGS VLH V G RSP S D+VFGKETS+EL I EDGI+QS+ +Q VFGT+
Sbjct: 26 HYLAKCVLRGSVVLHVVYGRIRSPTSFDVVFGKETSIELVVIGEDGIVQSVSDQPVFGTL 85
Query: 342 KDIAVLPLKDR 374
KD+A+LP KD+
Sbjct: 86 KDLAILPWKDK 96
>ref|XP_006481687.1| PREDICTED: uncharacterized protein LOC102624787 isoform X3 [Citrus
sinensis]
Length = 1182
Score = 105 bits (261), Expect = 8e-21
Identities = 48/70 (68%), Positives = 57/70 (81%)
Frame = +3
Query: 153 RGVHYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQSVF 332
R +HYLAKCVL+GS VL GH RSP S D+VFGKETS+EL I EDGI+QS+ EQ+VF
Sbjct: 28 RNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVF 87
Query: 333 GTIKDIAVLP 362
GTIKD+AV+P
Sbjct: 88 GTIKDLAVVP 97
>ref|XP_006481685.1| PREDICTED: uncharacterized protein LOC102624787 isoform X1 [Citrus
sinensis]
Length = 1394
Score = 105 bits (261), Expect = 8e-21
Identities = 48/70 (68%), Positives = 57/70 (81%)
Frame = +3
Query: 153 RGVHYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQSVF 332
R +HYLAKCVL+GS VL GH RSP S D+VFGKETS+EL I EDGI+QS+ EQ+VF
Sbjct: 28 RNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVF 87
Query: 333 GTIKDIAVLP 362
GTIKD+AV+P
Sbjct: 88 GTIKDLAVVP 97
>gb|EMJ05498.1| hypothetical protein PRUPE_ppa000262mg [Prunus persica]
Length = 1378
Score = 105 bits (261), Expect = 8e-21
Identities = 51/73 (69%), Positives = 57/73 (78%)
Frame = +3
Query: 162 HYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQSVFGTI 341
HYLAKCVLRGS VL + GH R P S D+VFGKETS+EL I EDGI+QSI EQ VFGTI
Sbjct: 25 HYLAKCVLRGSVVLQVLYGHIRFPTSYDVVFGKETSIELVIIGEDGIVQSICEQPVFGTI 84
Query: 342 KDIAVLPLKDRHR 380
KDIA+LP D+ R
Sbjct: 85 KDIAILPSNDKFR 97
>ref|XP_004170344.1| PREDICTED: uncharacterized protein LOC101227016, partial [Cucumis
sativus]
Length = 997
Score = 103 bits (257), Expect = 2e-20
Identities = 48/73 (65%), Positives = 59/73 (80%)
Frame = +3
Query: 162 HYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQSVFGTI 341
+YLAKCVLRGS VL + GH RSP S D+VFGKETS+EL I EDG++QS+ EQ+VFGTI
Sbjct: 24 YYLAKCVLRGSVVLQVLYGHIRSPSSLDVVFGKETSIELVVIGEDGVVQSVCEQAVFGTI 83
Query: 342 KDIAVLPLKDRHR 380
KD+A+LP +R R
Sbjct: 84 KDMAILPWNERFR 96
>ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-like [Cucumis sativus]
Length = 1376
Score = 103 bits (257), Expect = 2e-20
Identities = 48/73 (65%), Positives = 59/73 (80%)
Frame = +3
Query: 162 HYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQSVFGTI 341
+YLAKCVLRGS VL + GH RSP S D+VFGKETS+EL I EDG++QS+ EQ+VFGTI
Sbjct: 24 YYLAKCVLRGSVVLQVLYGHIRSPSSLDVVFGKETSIELVVIGEDGVVQSVCEQAVFGTI 83
Query: 342 KDIAVLPLKDRHR 380
KD+A+LP +R R
Sbjct: 84 KDMAILPWNERFR 96
>ref|XP_006838801.1| hypothetical protein AMTR_s00002p00260810 [Amborella trichopoda]
gi|548841307|gb|ERN01370.1| hypothetical protein
AMTR_s00002p00260810 [Amborella trichopoda]
Length = 1396
Score = 102 bits (253), Expect = 7e-20
Identities = 46/67 (68%), Positives = 58/67 (86%)
Frame = +3
Query: 159 VHYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQSVFGT 338
+HYLAKCVL+GS VL AV GH RSP S D++FGKETS+EL ++EDG++QS+ EQ+VFGT
Sbjct: 20 LHYLAKCVLKGSVVLQAVHGHMRSPSSFDVIFGKETSIELVVVSEDGVVQSVCEQTVFGT 79
Query: 339 IKDIAVL 359
IKD+AVL
Sbjct: 80 IKDLAVL 86
>emb|CBI29964.3| unnamed protein product [Vitis vinifera]
Length = 1363
Score = 102 bits (253), Expect = 7e-20
Identities = 50/71 (70%), Positives = 56/71 (78%)
Frame = +3
Query: 162 HYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQSVFGTI 341
HYLAKCVL+GS VLH V G RSP DIVFGKETSLEL I EDGI+QS+ EQ+VFGTI
Sbjct: 22 HYLAKCVLKGSVVLHVVHGRIRSPSFSDIVFGKETSLELVIIGEDGIVQSVCEQAVFGTI 81
Query: 342 KDIAVLPLKDR 374
KD+AVL +R
Sbjct: 82 KDLAVLRWNER 92
>ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-like [Vitis vinifera]
Length = 1387
Score = 102 bits (253), Expect = 7e-20
Identities = 50/71 (70%), Positives = 56/71 (78%)
Frame = +3
Query: 162 HYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQSVFGTI 341
HYLAKCVL+GS VLH V G RSP DIVFGKETSLEL I EDGI+QS+ EQ+VFGTI
Sbjct: 22 HYLAKCVLKGSVVLHVVHGRIRSPSFSDIVFGKETSLELVIIGEDGIVQSVCEQAVFGTI 81
Query: 342 KDIAVLPLKDR 374
KD+AVL +R
Sbjct: 82 KDLAVLRWNER 92
>gb|EOY09620.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein isoform 3 [Theobroma cacao]
Length = 1254
Score = 101 bits (252), Expect = 9e-20
Identities = 48/74 (64%), Positives = 59/74 (79%)
Frame = +3
Query: 153 RGVHYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQSVF 332
+GV+YLAKCVLRGS VL GH RSP S D+VFGKETS+EL + EDGI+ SI EQ+VF
Sbjct: 28 QGVNYLAKCVLRGSVVLQVAYGHLRSPSSFDVVFGKETSIELVIMGEDGIVTSICEQTVF 87
Query: 333 GTIKDIAVLPLKDR 374
GTIKD+A+LP ++
Sbjct: 88 GTIKDLAILPWNEK 101
>gb|EOY09618.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein isoform 1 [Theobroma cacao]
Length = 1391
Score = 101 bits (252), Expect = 9e-20
Identities = 48/74 (64%), Positives = 59/74 (79%)
Frame = +3
Query: 153 RGVHYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQSVF 332
+GV+YLAKCVLRGS VL GH RSP S D+VFGKETS+EL + EDGI+ SI EQ+VF
Sbjct: 28 QGVNYLAKCVLRGSVVLQVAYGHLRSPSSFDVVFGKETSIELVIMGEDGIVTSICEQTVF 87
Query: 333 GTIKDIAVLPLKDR 374
GTIKD+A+LP ++
Sbjct: 88 GTIKDLAILPWNEK 101
>ref|XP_004303372.1| PREDICTED: pre-mRNA-splicing factor rse-1-like [Fragaria vesca
subsp. vesca]
Length = 1396
Score = 101 bits (251), Expect = 1e-19
Identities = 48/73 (65%), Positives = 56/73 (76%)
Frame = +3
Query: 162 HYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQSVFGTI 341
H+L+KCVLRGS +LH + H RSP S DIVF KE S+EL I EDGI+QS+ EQ V+GTI
Sbjct: 27 HFLSKCVLRGSVLLHVLSAHLRSPSSNDIVFAKEKSIELVIIGEDGIVQSVCEQPVYGTI 86
Query: 342 KDIAVLPLKDRHR 380
KDIAVLP DR R
Sbjct: 87 KDIAVLPWNDRFR 99
>ref|XP_006604688.1| PREDICTED: uncharacterized protein LOC100799711 isoform X3 [Glycine
max]
Length = 1368
Score = 100 bits (249), Expect = 2e-19
Identities = 44/73 (60%), Positives = 58/73 (79%)
Frame = +3
Query: 162 HYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQSVFGTI 341
+YL+KCV RGS VLH + H RSP S D+VFGKETS+EL I+EDG +QS+F+Q VFGT+
Sbjct: 28 YYLSKCVFRGSVVLHVLHAHIRSPSSNDVVFGKETSIELVVIDEDGNVQSVFDQPVFGTL 87
Query: 342 KDIAVLPLKDRHR 380
KD+A+LP ++ R
Sbjct: 88 KDLAILPWNEKFR 100
>ref|XP_006604687.1| PREDICTED: uncharacterized protein LOC100799711 isoform X2 [Glycine
max]
Length = 1371
Score = 100 bits (249), Expect = 2e-19
Identities = 44/73 (60%), Positives = 58/73 (79%)
Frame = +3
Query: 162 HYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQSVFGTI 341
+YL+KCV RGS VLH + H RSP S D+VFGKETS+EL I+EDG +QS+F+Q VFGT+
Sbjct: 28 YYLSKCVFRGSVVLHVLHAHIRSPSSNDVVFGKETSIELVVIDEDGNVQSVFDQPVFGTL 87
Query: 342 KDIAVLPLKDRHR 380
KD+A+LP ++ R
Sbjct: 88 KDLAILPWNEKFR 100
>ref|XP_006604686.1| PREDICTED: uncharacterized protein LOC100799711 isoform X1 [Glycine
max]
Length = 1373
Score = 100 bits (249), Expect = 2e-19
Identities = 44/73 (60%), Positives = 58/73 (79%)
Frame = +3
Query: 162 HYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQSVFGTI 341
+YL+KCV RGS VLH + H RSP S D+VFGKETS+EL I+EDG +QS+F+Q VFGT+
Sbjct: 28 YYLSKCVFRGSVVLHVLHAHIRSPSSNDVVFGKETSIELVVIDEDGNVQSVFDQPVFGTL 87
Query: 342 KDIAVLPLKDRHR 380
KD+A+LP ++ R
Sbjct: 88 KDLAILPWNEKFR 100
>ref|XP_006351359.1| PREDICTED: pre-mRNA-splicing factor prp12-like isoform X2 [Solanum
tuberosum]
Length = 1321
Score = 99.0 bits (245), Expect = 6e-19
Identities = 50/76 (65%), Positives = 57/76 (75%)
Frame = +3
Query: 153 RGVHYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQSVF 332
RG YLAK VLRGS VL V G RSP S D+VFGKETS+EL I+EDG++QSI EQ VF
Sbjct: 25 RGASYLAKTVLRGSVVLQVVYGRIRSPTSYDVVFGKETSIELVIIDEDGVVQSICEQPVF 84
Query: 333 GTIKDIAVLPLKDRHR 380
G IKDIAVLP ++ R
Sbjct: 85 GIIKDIAVLPWNEKFR 100
>ref|XP_006351358.1| PREDICTED: pre-mRNA-splicing factor prp12-like isoform X1 [Solanum
tuberosum]
Length = 1393
Score = 99.0 bits (245), Expect = 6e-19
Identities = 50/76 (65%), Positives = 57/76 (75%)
Frame = +3
Query: 153 RGVHYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQSVF 332
RG YLAK VLRGS VL V G RSP S D+VFGKETS+EL I+EDG++QSI EQ VF
Sbjct: 25 RGASYLAKTVLRGSVVLQVVYGRIRSPTSYDVVFGKETSIELVIIDEDGVVQSICEQPVF 84
Query: 333 GTIKDIAVLPLKDRHR 380
G IKDIAVLP ++ R
Sbjct: 85 GIIKDIAVLPWNEKFR 100