BLASTX nr result
ID: Zingiber23_contig00006368
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00006368
(411 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006474054.1| PREDICTED: 50S ribosomal protein L35, chloro... 94 2e-17
ref|XP_006453553.1| hypothetical protein CICLE_v10009792mg [Citr... 91 1e-16
ref|XP_006453552.1| hypothetical protein CICLE_v10009792mg [Citr... 91 1e-16
sp|P23326.1|RK35_SPIOL RecName: Full=50S ribosomal protein L35, ... 87 2e-15
ref|XP_002324518.2| ribosomal protein L35 [Populus trichocarpa] ... 84 2e-14
gb|ABK93832.1| unknown [Populus trichocarpa] 84 3e-14
gb|EMJ24866.1| hypothetical protein PRUPE_ppa012843mg [Prunus pe... 83 3e-14
ref|XP_004146668.1| PREDICTED: 50S ribosomal protein L35, chloro... 81 2e-13
emb|CAA60774.1| ribosomal protein L35 [Arabidopsis thaliana] 80 2e-13
gb|EOY31512.1| 50S ribosomal protein L35 isoform 3 [Theobroma ca... 80 2e-13
gb|EOY31511.1| 50S ribosomal protein L35 isoform 2 [Theobroma ca... 80 2e-13
gb|EOY31510.1| 50S ribosomal protein L35 isoform 1 [Theobroma ca... 80 2e-13
gb|AAC63677.1| putative chloroplast ribosomal protein L35 [Arabi... 80 2e-13
ref|NP_850047.1| ribosomal protein L35 [Arabidopsis thaliana] gi... 80 2e-13
ref|NP_001235661.1| uncharacterized protein LOC100306481 [Glycin... 79 5e-13
ref|XP_002264584.1| PREDICTED: 50S ribosomal protein L35, chloro... 79 8e-13
ref|XP_002267813.1| PREDICTED: 50S ribosomal protein L35, chloro... 79 8e-13
ref|XP_002878721.1| ribosomal protein L35 [Arabidopsis lyrata su... 78 1e-12
gb|ESW26853.1| hypothetical protein PHAVU_003G153700g [Phaseolus... 78 1e-12
ref|XP_006845405.1| hypothetical protein AMTR_s00019p00070230 [A... 78 1e-12
>ref|XP_006474054.1| PREDICTED: 50S ribosomal protein L35, chloroplastic-like [Citrus
sinensis]
Length = 158
Score = 93.6 bits (231), Expect = 2e-17
Identities = 48/72 (66%), Positives = 55/72 (76%)
Frame = +2
Query: 194 RLSSFAAVSGSPLLLQAGPFPATYASSSGRPAAFAVFAAKGYKMKTHKASAKRFRVTGRG 373
RL+S ++S SPLL + FP T + RP VFAAKGYKMKTHKASAKRFRVTG+G
Sbjct: 49 RLNSSYSISASPLLFRHNNFPTTVTQN--RPQTVTVFAAKGYKMKTHKASAKRFRVTGKG 106
Query: 374 KIVRRRAGKQHL 409
KI+RRRAGKQHL
Sbjct: 107 KILRRRAGKQHL 118
>ref|XP_006453553.1| hypothetical protein CICLE_v10009792mg [Citrus clementina]
gi|557556779|gb|ESR66793.1| hypothetical protein
CICLE_v10009792mg [Citrus clementina]
Length = 151
Score = 91.3 bits (225), Expect = 1e-16
Identities = 47/72 (65%), Positives = 54/72 (75%)
Frame = +2
Query: 194 RLSSFAAVSGSPLLLQAGPFPATYASSSGRPAAFAVFAAKGYKMKTHKASAKRFRVTGRG 373
RL+S ++S SPLL + P T + RP VFAAKGYKMKTHKASAKRFRVTG+G
Sbjct: 42 RLNSSYSISASPLLFRHNNLPTTVTQN--RPQTVTVFAAKGYKMKTHKASAKRFRVTGKG 99
Query: 374 KIVRRRAGKQHL 409
KI+RRRAGKQHL
Sbjct: 100 KILRRRAGKQHL 111
>ref|XP_006453552.1| hypothetical protein CICLE_v10009792mg [Citrus clementina]
gi|557556778|gb|ESR66792.1| hypothetical protein
CICLE_v10009792mg [Citrus clementina]
Length = 130
Score = 91.3 bits (225), Expect = 1e-16
Identities = 47/72 (65%), Positives = 54/72 (75%)
Frame = +2
Query: 194 RLSSFAAVSGSPLLLQAGPFPATYASSSGRPAAFAVFAAKGYKMKTHKASAKRFRVTGRG 373
RL+S ++S SPLL + P T + RP VFAAKGYKMKTHKASAKRFRVTG+G
Sbjct: 42 RLNSSYSISASPLLFRHNNLPTTVTQN--RPQTVTVFAAKGYKMKTHKASAKRFRVTGKG 99
Query: 374 KIVRRRAGKQHL 409
KI+RRRAGKQHL
Sbjct: 100 KILRRRAGKQHL 111
>sp|P23326.1|RK35_SPIOL RecName: Full=50S ribosomal protein L35, chloroplastic; AltName:
Full=CL35; Flags: Precursor gi|189096153|pdb|3BBO|5
Chain 5, Homology Model For The Spinach Chloroplast 50s
Subunit Fitted To 9.4a Cryo-Em Map Of The 70s
Chlororibosome gi|170139|gb|AAA34043.1| ribosomal
protein L35 [Spinacia oleracea]
Length = 159
Score = 87.4 bits (215), Expect = 2e-15
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Frame = +2
Query: 143 ANGFRLSQSTPAISLQRRLSSFAAVSGS---PLLLQAGPFPATYASSSGRPAAFAVFAAK 313
A G L+ + LSS +++S S P++L+ +S S +F VFAAK
Sbjct: 29 AQGISLTHFNKQLKSTLNLSSSSSISSSKVQPIVLKNKRISTVDSSVSTSSPSFTVFAAK 88
Query: 314 GYKMKTHKASAKRFRVTGRGKIVRRRAGKQHL 409
GYKMKTHKASAKRFRVTG+GKIVRRRAGKQHL
Sbjct: 89 GYKMKTHKASAKRFRVTGKGKIVRRRAGKQHL 120
>ref|XP_002324518.2| ribosomal protein L35 [Populus trichocarpa]
gi|550318499|gb|EEF03083.2| ribosomal protein L35
[Populus trichocarpa]
Length = 150
Score = 84.0 bits (206), Expect = 2e-14
Identities = 51/85 (60%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Frame = +2
Query: 161 SQSTPAISLQR--RLSSFAAVSGSPLLLQAGPFPATYASSSGRPAAFAVFAAKGYKMKTH 334
+Q P I + RLSS +SGS L P T S + R + VFAAKGYKMKTH
Sbjct: 28 AQLAPLIKVNSSLRLSSCRNISGSGSLSPLKPCSIT--SLTQRFQSLTVFAAKGYKMKTH 85
Query: 335 KASAKRFRVTGRGKIVRRRAGKQHL 409
KASAKRFRVTG+GKIVRRRAGKQHL
Sbjct: 86 KASAKRFRVTGKGKIVRRRAGKQHL 110
>gb|ABK93832.1| unknown [Populus trichocarpa]
Length = 150
Score = 83.6 bits (205), Expect = 3e-14
Identities = 48/72 (66%), Positives = 52/72 (72%)
Frame = +2
Query: 194 RLSSFAAVSGSPLLLQAGPFPATYASSSGRPAAFAVFAAKGYKMKTHKASAKRFRVTGRG 373
RLSS +SGS L P T S + R + VFAAKGYKMKTHKASAKRFRVTG+G
Sbjct: 41 RLSSCRNISGSRSLSPLKPCSIT--SLTQRFQSLTVFAAKGYKMKTHKASAKRFRVTGKG 98
Query: 374 KIVRRRAGKQHL 409
KIVRRRAGKQHL
Sbjct: 99 KIVRRRAGKQHL 110
>gb|EMJ24866.1| hypothetical protein PRUPE_ppa012843mg [Prunus persica]
Length = 152
Score = 83.2 bits (204), Expect = 3e-14
Identities = 47/71 (66%), Positives = 52/71 (73%)
Frame = +2
Query: 197 LSSFAAVSGSPLLLQAGPFPATYASSSGRPAAFAVFAAKGYKMKTHKASAKRFRVTGRGK 376
LSS ++SG LL T ASS RP + + +AKGYKMKTHKASAKRFRVTGRGK
Sbjct: 44 LSSSHSISGLASLLPHRL--CTIASSPLRPRSLTIVSAKGYKMKTHKASAKRFRVTGRGK 101
Query: 377 IVRRRAGKQHL 409
IVRRRAGKQHL
Sbjct: 102 IVRRRAGKQHL 112
>ref|XP_004146668.1| PREDICTED: 50S ribosomal protein L35, chloroplastic-like [Cucumis
sativus] gi|449503151|ref|XP_004161859.1| PREDICTED: 50S
ribosomal protein L35, chloroplastic-like [Cucumis
sativus]
Length = 151
Score = 80.9 bits (198), Expect = 2e-13
Identities = 47/89 (52%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Frame = +2
Query: 152 FRLSQSTPAISLQRRLSSFAAVSG---SPLLLQAGPFPATYASSSGRPAAFAVFAAKGYK 322
FR+S ++ I+ +++S S S + P+ + +S F VFAAKGYK
Sbjct: 23 FRVSHTSVGIASVNKVNSLKLSSSHNISGFGFNSLQKPSHISPTSQIRTPFTVFAAKGYK 82
Query: 323 MKTHKASAKRFRVTGRGKIVRRRAGKQHL 409
MKTHKASAKRFRVTGRGKIVRRRAGKQHL
Sbjct: 83 MKTHKASAKRFRVTGRGKIVRRRAGKQHL 111
>emb|CAA60774.1| ribosomal protein L35 [Arabidopsis thaliana]
Length = 140
Score = 80.5 bits (197), Expect = 2e-13
Identities = 48/90 (53%), Positives = 59/90 (65%), Gaps = 6/90 (6%)
Frame = +2
Query: 158 LSQSTPAISLQRR------LSSFAAVSGSPLLLQAGPFPATYASSSGRPAAFAVFAAKGY 319
L S+P +SL+ LSS ++SG +L + +S + +F VFA KGY
Sbjct: 12 LRSSSPKVSLRSSVHFATSLSSSHSISGLRAVLPL-KISTVASPNSQKLHSFTVFAHKGY 70
Query: 320 KMKTHKASAKRFRVTGRGKIVRRRAGKQHL 409
KMKTHKASAKRFRVTGRGKIVRRR+GKQHL
Sbjct: 71 KMKTHKASAKRFRVTGRGKIVRRRSGKQHL 100
>gb|EOY31512.1| 50S ribosomal protein L35 isoform 3 [Theobroma cacao]
Length = 176
Score = 80.5 bits (197), Expect = 2e-13
Identities = 46/72 (63%), Positives = 50/72 (69%)
Frame = +2
Query: 194 RLSSFAAVSGSPLLLQAGPFPATYASSSGRPAAFAVFAAKGYKMKTHKASAKRFRVTGRG 373
+LSS +SG P + T A R + VFAAKGYKMKTHKASAKRFRVTGRG
Sbjct: 45 KLSSTQNISGFPSFVSYKLCTITPAPQ--RLQSLTVFAAKGYKMKTHKASAKRFRVTGRG 102
Query: 374 KIVRRRAGKQHL 409
KIVRRRAGKQHL
Sbjct: 103 KIVRRRAGKQHL 114
>gb|EOY31511.1| 50S ribosomal protein L35 isoform 2 [Theobroma cacao]
Length = 154
Score = 80.5 bits (197), Expect = 2e-13
Identities = 46/72 (63%), Positives = 50/72 (69%)
Frame = +2
Query: 194 RLSSFAAVSGSPLLLQAGPFPATYASSSGRPAAFAVFAAKGYKMKTHKASAKRFRVTGRG 373
+LSS +SG P + T A R + VFAAKGYKMKTHKASAKRFRVTGRG
Sbjct: 45 KLSSTQNISGFPSFVSYKLCTITPAPQ--RLQSLTVFAAKGYKMKTHKASAKRFRVTGRG 102
Query: 374 KIVRRRAGKQHL 409
KIVRRRAGKQHL
Sbjct: 103 KIVRRRAGKQHL 114
>gb|EOY31510.1| 50S ribosomal protein L35 isoform 1 [Theobroma cacao]
Length = 172
Score = 80.5 bits (197), Expect = 2e-13
Identities = 46/72 (63%), Positives = 50/72 (69%)
Frame = +2
Query: 194 RLSSFAAVSGSPLLLQAGPFPATYASSSGRPAAFAVFAAKGYKMKTHKASAKRFRVTGRG 373
+LSS +SG P + T A R + VFAAKGYKMKTHKASAKRFRVTGRG
Sbjct: 45 KLSSTQNISGFPSFVSYKLCTITPAPQ--RLQSLTVFAAKGYKMKTHKASAKRFRVTGRG 102
Query: 374 KIVRRRAGKQHL 409
KIVRRRAGKQHL
Sbjct: 103 KIVRRRAGKQHL 114
>gb|AAC63677.1| putative chloroplast ribosomal protein L35 [Arabidopsis thaliana]
gi|20197496|gb|AAM15097.1| putative chloroplast
ribosomal protein L35 [Arabidopsis thaliana]
Length = 129
Score = 80.5 bits (197), Expect = 2e-13
Identities = 48/90 (53%), Positives = 59/90 (65%), Gaps = 6/90 (6%)
Frame = +2
Query: 158 LSQSTPAISLQRR------LSSFAAVSGSPLLLQAGPFPATYASSSGRPAAFAVFAAKGY 319
L S+P +SL+ LSS ++SG +L + +S + +F VFA KGY
Sbjct: 17 LRSSSPKVSLRSSVHFATSLSSSHSISGLRAVLPL-KISTVASPNSQKLHSFTVFAHKGY 75
Query: 320 KMKTHKASAKRFRVTGRGKIVRRRAGKQHL 409
KMKTHKASAKRFRVTGRGKIVRRR+GKQHL
Sbjct: 76 KMKTHKASAKRFRVTGRGKIVRRRSGKQHL 105
>ref|NP_850047.1| ribosomal protein L35 [Arabidopsis thaliana]
gi|17529002|gb|AAL38711.1| putative chloroplast
ribosomal protein L35 [Arabidopsis thaliana]
gi|20465445|gb|AAM20182.1| putative chloroplast
ribosomal protein L35 [Arabidopsis thaliana]
gi|330252434|gb|AEC07528.1| ribosomal protein L35
[Arabidopsis thaliana]
Length = 145
Score = 80.5 bits (197), Expect = 2e-13
Identities = 48/90 (53%), Positives = 59/90 (65%), Gaps = 6/90 (6%)
Frame = +2
Query: 158 LSQSTPAISLQRR------LSSFAAVSGSPLLLQAGPFPATYASSSGRPAAFAVFAAKGY 319
L S+P +SL+ LSS ++SG +L + +S + +F VFA KGY
Sbjct: 17 LRSSSPKVSLRSSVHFATSLSSSHSISGLRAVLPL-KISTVASPNSQKLHSFTVFAHKGY 75
Query: 320 KMKTHKASAKRFRVTGRGKIVRRRAGKQHL 409
KMKTHKASAKRFRVTGRGKIVRRR+GKQHL
Sbjct: 76 KMKTHKASAKRFRVTGRGKIVRRRSGKQHL 105
>ref|NP_001235661.1| uncharacterized protein LOC100306481 [Glycine max]
gi|255628681|gb|ACU14685.1| unknown [Glycine max]
Length = 138
Score = 79.3 bits (194), Expect = 5e-13
Identities = 44/72 (61%), Positives = 53/72 (73%)
Frame = +2
Query: 194 RLSSFAAVSGSPLLLQAGPFPATYASSSGRPAAFAVFAAKGYKMKTHKASAKRFRVTGRG 373
+LSS A++S +P+L Q + S RP + +AKGYKMKTHKASAKRFRVTG+G
Sbjct: 28 KLSSSASIS-TPILQQKLCSLLSPLPLSPRPRPLTIVSAKGYKMKTHKASAKRFRVTGQG 86
Query: 374 KIVRRRAGKQHL 409
KIVRRRAGKQHL
Sbjct: 87 KIVRRRAGKQHL 98
>ref|XP_002264584.1| PREDICTED: 50S ribosomal protein L35, chloroplastic [Vitis
vinifera]
Length = 153
Score = 78.6 bits (192), Expect = 8e-13
Identities = 44/72 (61%), Positives = 51/72 (70%)
Frame = +2
Query: 194 RLSSFAAVSGSPLLLQAGPFPATYASSSGRPAAFAVFAAKGYKMKTHKASAKRFRVTGRG 373
+LSS +SG +L S S +P++ V +AKGYKMKTHKASAKRFRVTGRG
Sbjct: 43 KLSSSRNISGFAPILPLRHSTLNSPSPS-QPSSLTVVSAKGYKMKTHKASAKRFRVTGRG 101
Query: 374 KIVRRRAGKQHL 409
KIVRRRAGKQHL
Sbjct: 102 KIVRRRAGKQHL 113
>ref|XP_002267813.1| PREDICTED: 50S ribosomal protein L35, chloroplastic [Vitis
vinifera] gi|147785813|emb|CAN77631.1| hypothetical
protein VITISV_001803 [Vitis vinifera]
gi|147799145|emb|CAN63703.1| hypothetical protein
VITISV_039205 [Vitis vinifera]
Length = 153
Score = 78.6 bits (192), Expect = 8e-13
Identities = 44/72 (61%), Positives = 51/72 (70%)
Frame = +2
Query: 194 RLSSFAAVSGSPLLLQAGPFPATYASSSGRPAAFAVFAAKGYKMKTHKASAKRFRVTGRG 373
+LSS +SG +L S S +P++ V +AKGYKMKTHKASAKRFRVTGRG
Sbjct: 43 KLSSSRNISGFAPILPLRHSTLNSPSPS-QPSSLTVVSAKGYKMKTHKASAKRFRVTGRG 101
Query: 374 KIVRRRAGKQHL 409
KIVRRRAGKQHL
Sbjct: 102 KIVRRRAGKQHL 113
>ref|XP_002878721.1| ribosomal protein L35 [Arabidopsis lyrata subsp. lyrata]
gi|297324560|gb|EFH54980.1| ribosomal protein L35
[Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 78.2 bits (191), Expect = 1e-12
Identities = 49/90 (54%), Positives = 64/90 (71%), Gaps = 6/90 (6%)
Frame = +2
Query: 158 LSQSTPAISLQRRLSSFAAVSGSPLL--LQAGPFP---ATYAS-SSGRPAAFAVFAAKGY 319
L S+P +SL+ + +++ S + L+A FP +T AS +S + +F VFA KGY
Sbjct: 12 LRSSSPKVSLRSSVQFATSLASSHSISGLRA-VFPQKISTVASPNSQKFQSFTVFAHKGY 70
Query: 320 KMKTHKASAKRFRVTGRGKIVRRRAGKQHL 409
K+KTHKASAKRFRVTGRGKIVRRR+GKQHL
Sbjct: 71 KLKTHKASAKRFRVTGRGKIVRRRSGKQHL 100
>gb|ESW26853.1| hypothetical protein PHAVU_003G153700g [Phaseolus vulgaris]
Length = 143
Score = 77.8 bits (190), Expect = 1e-12
Identities = 46/71 (64%), Positives = 53/71 (74%)
Frame = +2
Query: 197 LSSFAAVSGSPLLLQAGPFPATYASSSGRPAAFAVFAAKGYKMKTHKASAKRFRVTGRGK 376
LSS A++S +PLL Q + S + RP + +AKGYKMKTHKASAKRFRVTGRGK
Sbjct: 36 LSSSASIS-APLLRQKLCTAPSPLSPTLRP--LTIVSAKGYKMKTHKASAKRFRVTGRGK 92
Query: 377 IVRRRAGKQHL 409
IVRRRAGKQHL
Sbjct: 93 IVRRRAGKQHL 103
>ref|XP_006845405.1| hypothetical protein AMTR_s00019p00070230 [Amborella trichopoda]
gi|548847977|gb|ERN07080.1| hypothetical protein
AMTR_s00019p00070230 [Amborella trichopoda]
Length = 140
Score = 77.8 bits (190), Expect = 1e-12
Identities = 45/88 (51%), Positives = 53/88 (60%)
Frame = +2
Query: 146 NGFRLSQSTPAISLQRRLSSFAAVSGSPLLLQAGPFPATYASSSGRPAAFAVFAAKGYKM 325
N +LS S + L SSF S +P + + +P + + AAKGYKM
Sbjct: 35 NSLKLSSSRSSFGL----SSFPLKSVTP-----------FCNPPQKPGSLTIVAAKGYKM 79
Query: 326 KTHKASAKRFRVTGRGKIVRRRAGKQHL 409
KTHKASAKRFRVTG GKIVRRRAGKQHL
Sbjct: 80 KTHKASAKRFRVTGNGKIVRRRAGKQHL 107