BLASTX nr result

ID: Zingiber23_contig00004334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00004334
         (544 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ07057.1| hypothetical protein PRUPE_ppa011157mg [Prunus pe...   124   1e-26
ref|XP_003635560.1| PREDICTED: polyadenylate-binding protein 2-l...   124   1e-26
emb|CBI33270.3| unnamed protein product [Vitis vinifera]              124   1e-26
ref|XP_006466250.1| PREDICTED: polyadenylate-binding protein 2-l...   123   2e-26
ref|XP_006426355.1| hypothetical protein CICLE_v100264481mg, par...   123   2e-26
ref|XP_006426354.1| hypothetical protein CICLE_v100264481mg, par...   123   2e-26
ref|XP_004288178.1| PREDICTED: polyadenylate-binding protein 2-l...   123   2e-26
ref|XP_004288177.1| PREDICTED: polyadenylate-binding protein 2-l...   123   3e-26
ref|XP_002531675.1| poly-A binding protein, putative [Ricinus co...   122   7e-26
gb|EPS60140.1| hypothetical protein M569_14665, partial [Genlise...   121   9e-26
ref|XP_002306300.1| hypothetical protein POPTR_0005s07440g [Popu...   121   1e-25
ref|NP_201329.1| RNA recognition motif-containing protein [Arabi...   120   2e-25
ref|XP_006279497.1| hypothetical protein CARUB_v10027046mg, part...   120   2e-25
ref|XP_002866661.1| polyadenylate-binding protein family protein...   120   2e-25
ref|XP_006828070.1| hypothetical protein AMTR_s00008p00267630 [A...   119   4e-25
ref|XP_006580259.1| PREDICTED: polyadenylate-binding protein 2 i...   119   5e-25
ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2 i...   119   5e-25
gb|ACU19123.1| unknown [Glycine max]                                  119   5e-25
gb|ACJ84516.1| unknown [Medicago truncatula] gi|388501418|gb|AFK...   119   5e-25
ref|XP_006394056.1| hypothetical protein EUTSA_v10004890mg [Eutr...   119   6e-25

>gb|EMJ07057.1| hypothetical protein PRUPE_ppa011157mg [Prunus persica]
          Length = 221

 Score =  124 bits (311), Expect = 1e-26
 Identities = 59/66 (89%), Positives = 61/66 (92%)
 Frame = -1

Query: 544 DKFGQPKGFAYVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYM 365
           DKFGQPKGFAYVEFLETEAVQEAL LNESELHGRQ+KV  KRTNVPGMKQ+RPRRFNPYM
Sbjct: 127 DKFGQPKGFAYVEFLETEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYM 186

Query: 364 GYSTRR 347
           GY  RR
Sbjct: 187 GYRFRR 192


>ref|XP_003635560.1| PREDICTED: polyadenylate-binding protein 2-like, partial [Vitis
           vinifera]
          Length = 130

 Score =  124 bits (311), Expect = 1e-26
 Identities = 59/66 (89%), Positives = 61/66 (92%)
 Frame = -1

Query: 544 DKFGQPKGFAYVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYM 365
           DK+GQPKGFAYVEFLE EAVQEAL LNESELHGRQ+KV AKRTNVPGMKQFRPRRFNPYM
Sbjct: 36  DKYGQPKGFAYVEFLEVEAVQEALLLNESELHGRQLKVLAKRTNVPGMKQFRPRRFNPYM 95

Query: 364 GYSTRR 347
           GY  RR
Sbjct: 96  GYRFRR 101


>emb|CBI33270.3| unnamed protein product [Vitis vinifera]
          Length = 145

 Score =  124 bits (311), Expect = 1e-26
 Identities = 59/66 (89%), Positives = 61/66 (92%)
 Frame = -1

Query: 544 DKFGQPKGFAYVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYM 365
           DK+GQPKGFAYVEFLE EAVQEAL LNESELHGRQ+KV AKRTNVPGMKQFRPRRFNPYM
Sbjct: 51  DKYGQPKGFAYVEFLEVEAVQEALLLNESELHGRQLKVLAKRTNVPGMKQFRPRRFNPYM 110

Query: 364 GYSTRR 347
           GY  RR
Sbjct: 111 GYRFRR 116


>ref|XP_006466250.1| PREDICTED: polyadenylate-binding protein 2-like [Citrus sinensis]
          Length = 218

 Score =  123 bits (309), Expect = 2e-26
 Identities = 58/66 (87%), Positives = 61/66 (92%)
 Frame = -1

Query: 544 DKFGQPKGFAYVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYM 365
           DKFGQPKGFAYVEFLE +AVQEALQLNESELHGRQ+KV  KRTNVPGMKQ+RPRRFNPYM
Sbjct: 124 DKFGQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYM 183

Query: 364 GYSTRR 347
           GY  RR
Sbjct: 184 GYRGRR 189


>ref|XP_006426355.1| hypothetical protein CICLE_v100264481mg, partial [Citrus
           clementina] gi|557528345|gb|ESR39595.1| hypothetical
           protein CICLE_v100264481mg, partial [Citrus clementina]
          Length = 122

 Score =  123 bits (309), Expect = 2e-26
 Identities = 58/66 (87%), Positives = 61/66 (92%)
 Frame = -1

Query: 544 DKFGQPKGFAYVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYM 365
           DKFGQPKGFAYVEFLE +AVQEALQLNESELHGRQ+KV  KRTNVPGMKQ+RPRRFNPYM
Sbjct: 28  DKFGQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYM 87

Query: 364 GYSTRR 347
           GY  RR
Sbjct: 88  GYRGRR 93


>ref|XP_006426354.1| hypothetical protein CICLE_v100264481mg, partial [Citrus
           clementina] gi|557528344|gb|ESR39594.1| hypothetical
           protein CICLE_v100264481mg, partial [Citrus clementina]
          Length = 114

 Score =  123 bits (309), Expect = 2e-26
 Identities = 58/66 (87%), Positives = 61/66 (92%)
 Frame = -1

Query: 544 DKFGQPKGFAYVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYM 365
           DKFGQPKGFAYVEFLE +AVQEALQLNESELHGRQ+KV  KRTNVPGMKQ+RPRRFNPYM
Sbjct: 28  DKFGQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYM 87

Query: 364 GYSTRR 347
           GY  RR
Sbjct: 88  GYRGRR 93


>ref|XP_004288178.1| PREDICTED: polyadenylate-binding protein 2-like [Fragaria vesca
           subsp. vesca]
          Length = 222

 Score =  123 bits (309), Expect = 2e-26
 Identities = 59/66 (89%), Positives = 61/66 (92%)
 Frame = -1

Query: 544 DKFGQPKGFAYVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYM 365
           DKFGQPKGFAYVEFLETEAVQEAL LNESELHGRQ+KV  KRTNVPGMKQFRPRRF+PYM
Sbjct: 128 DKFGQPKGFAYVEFLETEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQFRPRRFSPYM 187

Query: 364 GYSTRR 347
           GY  RR
Sbjct: 188 GYRFRR 193


>ref|XP_004288177.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Fragaria
           vesca subsp. vesca]
          Length = 226

 Score =  123 bits (308), Expect = 3e-26
 Identities = 58/66 (87%), Positives = 61/66 (92%)
 Frame = -1

Query: 544 DKFGQPKGFAYVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYM 365
           DKFGQPKG+AYVEFLE EAVQ+AL LNESELHGRQ+KV  KRTNVPGMKQFRPRRFNPYM
Sbjct: 132 DKFGQPKGYAYVEFLEAEAVQKALALNESELHGRQLKVLPKRTNVPGMKQFRPRRFNPYM 191

Query: 364 GYSTRR 347
           GYS RR
Sbjct: 192 GYSFRR 197


>ref|XP_002531675.1| poly-A binding protein, putative [Ricinus communis]
           gi|223528706|gb|EEF30719.1| poly-A binding protein,
           putative [Ricinus communis]
          Length = 218

 Score =  122 bits (305), Expect = 7e-26
 Identities = 57/66 (86%), Positives = 60/66 (90%)
 Frame = -1

Query: 544 DKFGQPKGFAYVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYM 365
           DKFGQPKGFAYVEFLE EA+QEAL LNESELHGRQ+KV  KRTNVPGMKQ+RPRRFNPYM
Sbjct: 124 DKFGQPKGFAYVEFLEVEAIQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYM 183

Query: 364 GYSTRR 347
           GY  RR
Sbjct: 184 GYRFRR 189


>gb|EPS60140.1| hypothetical protein M569_14665, partial [Genlisea aurea]
          Length = 109

 Score =  121 bits (304), Expect = 9e-26
 Identities = 57/66 (86%), Positives = 60/66 (90%)
 Frame = -1

Query: 544 DKFGQPKGFAYVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYM 365
           DKFGQPKGFAYVEFLE EA+QEALQLNESELHGRQ+KV AKRTNVPGMK FRPRRFNPY+
Sbjct: 28  DKFGQPKGFAYVEFLEAEAIQEALQLNESELHGRQLKVMAKRTNVPGMKLFRPRRFNPYI 87

Query: 364 GYSTRR 347
            Y  RR
Sbjct: 88  AYGFRR 93


>ref|XP_002306300.1| hypothetical protein POPTR_0005s07440g [Populus trichocarpa]
           gi|222855749|gb|EEE93296.1| hypothetical protein
           POPTR_0005s07440g [Populus trichocarpa]
          Length = 218

 Score =  121 bits (303), Expect = 1e-25
 Identities = 57/66 (86%), Positives = 60/66 (90%)
 Frame = -1

Query: 544 DKFGQPKGFAYVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYM 365
           DKFGQPKGFAYVEFLE EAVQEAL LNESELHGRQ+KV+ KRTNVPGMKQ+RPRR NPYM
Sbjct: 124 DKFGQPKGFAYVEFLEVEAVQEALALNESELHGRQLKVSPKRTNVPGMKQYRPRRINPYM 183

Query: 364 GYSTRR 347
           GY  RR
Sbjct: 184 GYRFRR 189


>ref|NP_201329.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|14423494|gb|AAK62429.1|AF386984_1 poly(A)-binding
           protein II-like [Arabidopsis thaliana]
           gi|10178188|dbj|BAB11662.1| poly(A)-binding protein
           II-like [Arabidopsis thaliana]
           gi|23197620|gb|AAN15337.1| poly(A)-binding protein
           II-like [Arabidopsis thaliana]
           gi|332010647|gb|AED98030.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 220

 Score =  120 bits (301), Expect = 2e-25
 Identities = 57/66 (86%), Positives = 60/66 (90%)
 Frame = -1

Query: 544 DKFGQPKGFAYVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYM 365
           DKFGQPKGFAYVEF+E EAVQEALQLNESELHGRQ+KV  KRTNVPG+KQFR RRFNPYM
Sbjct: 126 DKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNVPGLKQFRGRRFNPYM 185

Query: 364 GYSTRR 347
           GY  RR
Sbjct: 186 GYRFRR 191


>ref|XP_006279497.1| hypothetical protein CARUB_v10027046mg, partial [Capsella rubella]
           gi|482548201|gb|EOA12395.1| hypothetical protein
           CARUB_v10027046mg, partial [Capsella rubella]
          Length = 233

 Score =  120 bits (301), Expect = 2e-25
 Identities = 57/66 (86%), Positives = 60/66 (90%)
 Frame = -1

Query: 544 DKFGQPKGFAYVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYM 365
           DKFGQPKGFAYVEF+E EAVQEALQLNESELHGRQ+KV  KRTNVPG+KQFR RRFNPYM
Sbjct: 139 DKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVMQKRTNVPGLKQFRGRRFNPYM 198

Query: 364 GYSTRR 347
           GY  RR
Sbjct: 199 GYRFRR 204


>ref|XP_002866661.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297312496|gb|EFH42920.1|
           polyadenylate-binding protein family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 220

 Score =  120 bits (301), Expect = 2e-25
 Identities = 57/66 (86%), Positives = 60/66 (90%)
 Frame = -1

Query: 544 DKFGQPKGFAYVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYM 365
           DKFGQPKGFAYVEF+E EAVQEALQLNESELHGRQ+KV  KRTNVPG+KQFR RRFNPYM
Sbjct: 126 DKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNVPGLKQFRGRRFNPYM 185

Query: 364 GYSTRR 347
           GY  RR
Sbjct: 186 GYRFRR 191


>ref|XP_006828070.1| hypothetical protein AMTR_s00008p00267630 [Amborella trichopoda]
           gi|548832705|gb|ERM95486.1| hypothetical protein
           AMTR_s00008p00267630 [Amborella trichopoda]
          Length = 220

 Score =  119 bits (299), Expect = 4e-25
 Identities = 56/66 (84%), Positives = 60/66 (90%)
 Frame = -1

Query: 544 DKFGQPKGFAYVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYM 365
           DKFGQPKGFAYVEF+E EAVQ AL LNESELHGRQ+KV AKRTNVPGMKQFRPRRFNPY+
Sbjct: 126 DKFGQPKGFAYVEFVELEAVQNALLLNESELHGRQLKVLAKRTNVPGMKQFRPRRFNPYL 185

Query: 364 GYSTRR 347
            Y +RR
Sbjct: 186 AYRSRR 191


>ref|XP_006580259.1| PREDICTED: polyadenylate-binding protein 2 isoform X2 [Glycine max]
          Length = 141

 Score =  119 bits (298), Expect = 5e-25
 Identities = 56/66 (84%), Positives = 59/66 (89%)
 Frame = -1

Query: 544 DKFGQPKGFAYVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYM 365
           DKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQ+KV  KRTNVPGMKQ+RPRRFNPYM
Sbjct: 47  DKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYM 106

Query: 364 GYSTRR 347
            Y  RR
Sbjct: 107 AYGFRR 112


>ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2 isoform X1 [Glycine max]
          Length = 215

 Score =  119 bits (298), Expect = 5e-25
 Identities = 56/66 (84%), Positives = 59/66 (89%)
 Frame = -1

Query: 544 DKFGQPKGFAYVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYM 365
           DKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQ+KV  KRTNVPGMKQ+RPRRFNPYM
Sbjct: 121 DKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYM 180

Query: 364 GYSTRR 347
            Y  RR
Sbjct: 181 AYGFRR 186


>gb|ACU19123.1| unknown [Glycine max]
          Length = 205

 Score =  119 bits (298), Expect = 5e-25
 Identities = 56/66 (84%), Positives = 59/66 (89%)
 Frame = -1

Query: 544 DKFGQPKGFAYVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYM 365
           DKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQ+KV  KRTNVPGMKQ+RPRRFNPYM
Sbjct: 121 DKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYM 180

Query: 364 GYSTRR 347
            Y  RR
Sbjct: 181 AYGFRR 186


>gb|ACJ84516.1| unknown [Medicago truncatula] gi|388501418|gb|AFK38775.1| unknown
           [Medicago truncatula]
          Length = 216

 Score =  119 bits (298), Expect = 5e-25
 Identities = 56/66 (84%), Positives = 60/66 (90%)
 Frame = -1

Query: 544 DKFGQPKGFAYVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYM 365
           DKFGQPKGFAYVEF+ETEAVQEAL L+ESELHGRQ+KV  KRTNVPGMKQ+RPRRFNPYM
Sbjct: 122 DKFGQPKGFAYVEFVETEAVQEALLLSESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYM 181

Query: 364 GYSTRR 347
            Y  RR
Sbjct: 182 AYGFRR 187


>ref|XP_006394056.1| hypothetical protein EUTSA_v10004890mg [Eutrema salsugineum]
           gi|557090695|gb|ESQ31342.1| hypothetical protein
           EUTSA_v10004890mg [Eutrema salsugineum]
          Length = 220

 Score =  119 bits (297), Expect = 6e-25
 Identities = 55/66 (83%), Positives = 60/66 (90%)
 Frame = -1

Query: 544 DKFGQPKGFAYVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYM 365
           DKFGQPKGFAYVEF+E EA+QEALQLNESELHGRQ+KV  KRTNVPG+KQ+R RRFNPYM
Sbjct: 126 DKFGQPKGFAYVEFVEVEAIQEALQLNESELHGRQLKVLPKRTNVPGLKQYRGRRFNPYM 185

Query: 364 GYSTRR 347
           GY  RR
Sbjct: 186 GYRFRR 191


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