BLASTX nr result
ID: Zingiber23_contig00004144
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00004144
(1925 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278451.1| PREDICTED: pentatricopeptide repeat-containi... 693 0.0
ref|XP_004300258.1| PREDICTED: pentatricopeptide repeat-containi... 681 0.0
gb|EMJ11528.1| hypothetical protein PRUPE_ppa002049mg [Prunus pe... 681 0.0
gb|EXB99769.1| hypothetical protein L484_023300 [Morus notabilis] 680 0.0
ref|XP_006485434.1| PREDICTED: pentatricopeptide repeat-containi... 673 0.0
ref|XP_006398352.1| hypothetical protein EUTSA_v10000815mg [Eutr... 671 0.0
ref|XP_004245879.1| PREDICTED: pentatricopeptide repeat-containi... 671 0.0
ref|XP_006352838.1| PREDICTED: pentatricopeptide repeat-containi... 669 0.0
gb|EOY24047.1| Pentatricopeptide (PPR) repeat-containing protein... 669 0.0
ref|XP_006281680.1| hypothetical protein CARUB_v10027819mg [Caps... 662 0.0
ref|XP_002863397.1| pentatricopeptide repeat-containing protein ... 661 0.0
ref|XP_006385629.1| hypothetical protein POPTR_0003s08800g [Popu... 661 0.0
ref|NP_199470.1| pentatricopeptide repeat-containing protein [Ar... 660 0.0
ref|XP_004148730.1| PREDICTED: pentatricopeptide repeat-containi... 659 0.0
ref|XP_006847699.1| hypothetical protein AMTR_s00149p00067630 [A... 653 0.0
ref|XP_003524052.1| PREDICTED: pentatricopeptide repeat-containi... 652 0.0
ref|XP_003608637.1| Pentatricopeptide repeat-containing protein ... 650 0.0
ref|XP_003559110.1| PREDICTED: pentatricopeptide repeat-containi... 648 0.0
ref|XP_004980989.1| PREDICTED: pentatricopeptide repeat-containi... 646 0.0
ref|NP_001051946.1| Os03g0856100 [Oryza sativa Japonica Group] g... 646 0.0
>ref|XP_002278451.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic [Vitis vinifera]
Length = 723
Score = 693 bits (1788), Expect = 0.0
Identities = 339/520 (65%), Positives = 422/520 (81%), Gaps = 2/520 (0%)
Frame = +3
Query: 3 TIFYNVVFKSLRAARRWTPVEELAQQMIDAEVPLDNITYSTIISAAKRCRRFDEAISWFE 182
TIFYNV KSLR R++ +EELA +MI V LDNITYSTII+ AKRC FD+A+ WFE
Sbjct: 199 TIFYNVTMKSLRFGRQFQLIEELANEMISTGVELDNITYSTIITCAKRCNLFDKAVKWFE 258
Query: 183 RMYRTGVVPDEVTYSVVLDVYAELGRREEVLALYDRARASGWRPDVVAFAVLGKMFGEAG 362
RMY+TG++PDEVTYS +LDVYA+LG+ EEVL+LY+R RASGW+PD +AFAVLGKMFGEAG
Sbjct: 259 RMYKTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFAVLGKMFGEAG 318
Query: 363 DYDGINYVLKEMKDLGVKANVVLYNTLIEATGKARRPGLARSLFEEMVAEGLSPNGKTLT 542
DYDGI YVL+EMK LGV+ N+V+YNTL+EA GKA +PGLARSLFEEMV G+ P+ KTLT
Sbjct: 319 DYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGLARSLFEEMVGSGVIPDAKTLT 378
Query: 543 SLIKIYGKARWSKDALGLWELMMANRWPMDFILYNTLLSMCADLGLEEEAEKLFEDMQRP 722
+L+KIYGKARW++DAL LWE M +N WPMDFILYNTLLSMCADLGLEEEAEKLFEDM++
Sbjct: 379 ALVKIYGKARWARDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAEKLFEDMKKS 438
Query: 723 ERYIRPDSWSYTGMVNIYANGGKPDKALQMFDEMLHKGVQPNVMTYTCLIPCLGKAGRIA 902
E + RPDSWSYT M+NIY +GG D+A+Q+FDEM GVQ NVM TCL CLG+A RI
Sbjct: 439 E-HCRPDSWSYTAMLNIYGSGGNVDRAMQLFDEMSELGVQINVMGCTCLSQCLGRARRID 497
Query: 903 EAVKVFETAMDRGIQPDDRLCGCLLSVVALCKEGE-FDMLLACLDKANPRLVGLVKMLSD 1079
+ VKVFE +++RG++PDDRLCGCLLSVV+ C+ E + +LACL +ANP+LV V +L +
Sbjct: 498 DLVKVFEVSLERGVKPDDRLCGCLLSVVSFCEGAEDANKVLACLQQANPKLVAFVNLL-E 556
Query: 1080 EQCTIDEIKTEFRRIMNESAVEVRRPFCNCLIDICMNQGFPSQRSNELLYLGTVFGLYQG 1259
E+ + + +K EFR I+ ++AVE RRPFCNCLIDIC N+ +R++ELLYLGT++GLY G
Sbjct: 557 EKISFEALKEEFRGILTDTAVEARRPFCNCLIDICRNRSL-HERAHELLYLGTLYGLYPG 615
Query: 1260 LHVRKPDEWLLDLRSLSIGAAKTAFEEWMKNLLNSVEQEEILPQSFSIQAGSGTHKFSQG 1439
LH R DEW LD+RSLS+GAA TA EEWM L V++EE LP++FS G+GTHKFSQG
Sbjct: 616 LHNRTADEWCLDVRSLSVGAAHTALEEWMGTLSKIVQREEALPEAFSANTGTGTHKFSQG 675
Query: 1440 LASSFYTYLKKLAAPFRQG-NNSGNFVASKDDLISWLPSR 1556
LAS+F +++KKLAAPF Q +G FVA+++DL+SW+ SR
Sbjct: 676 LASAFASHVKKLAAPFTQSEEKAGCFVATREDLVSWVQSR 715
>ref|XP_004300258.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 716
Score = 681 bits (1758), Expect = 0.0
Identities = 331/522 (63%), Positives = 425/522 (81%), Gaps = 2/522 (0%)
Frame = +3
Query: 3 TIFYNVVFKSLRAARRWTPVEELAQQMIDAEVPLDNITYSTIISAAKRCRRFDEAISWFE 182
TIFYNV KS+R R++ +EELA+ M+ V LDNITYSTII+ AKR + FD+A+ WFE
Sbjct: 193 TIFYNVTMKSMRFGRQFQLIEELAEDMVSNGVDLDNITYSTIITCAKRSKLFDKAVEWFE 252
Query: 183 RMYRTGVVPDEVTYSVVLDVYAELGRREEVLALYDRARASGWRPDVVAFAVLGKMFGEAG 362
RMY+TG++PDEVTYS +LDVYA+LG+ EEVL+LY+R RASGW PD +AF+VLGKMFGEAG
Sbjct: 253 RMYKTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWTPDPIAFSVLGKMFGEAG 312
Query: 363 DYDGINYVLKEMKDLGVKANVVLYNTLIEATGKARRPGLARSLFEEMVAEGLSPNGKTLT 542
DYDGI YVL+EM +GVK N+V+YNTL+EA GKA +PGLARSLFEEMVA GL+PN KTLT
Sbjct: 313 DYDGIRYVLQEMAAIGVKPNLVVYNTLLEAMGKAGKPGLARSLFEEMVASGLTPNEKTLT 372
Query: 543 SLIKIYGKARWSKDALGLWELMMANRWPMDFILYNTLLSMCADLGLEEEAEKLFEDMQRP 722
+L+KIYGKARW++DAL LWE M +N+WPMDFILYNTLL+MCADLGLE+EA++LFEDM++
Sbjct: 373 ALVKIYGKARWARDALDLWERMRSNKWPMDFILYNTLLNMCADLGLEDEAKRLFEDMKQS 432
Query: 723 ERYIRPDSWSYTGMVNIYANGGKPDKALQMFDEMLHKGVQPNVMTYTCLIPCLGKAGRIA 902
E + RPDS+SYT M+NI+ +GG D+A+++F+EM KGV NVM TCLI CLG+A R
Sbjct: 433 E-HCRPDSYSYTAMLNIFGSGGNADEAMELFEEMSKKGVHLNVMGCTCLIQCLGRAKRFG 491
Query: 903 EAVKVFETAMDRGIQPDDRLCGCLLSVVALCKEGE-FDMLLACLDKANPRLVGLVKMLSD 1079
+ V+VF A++RG++PDDRLCGCLLSVV+LC++ E DM+ +CL +AN +LV LVK+L D
Sbjct: 492 DMVRVFNVAVERGVKPDDRLCGCLLSVVSLCEKTEDEDMVFSCLQQANLKLVTLVKLLQD 551
Query: 1080 EQCTIDEIKTEFRRIMNESAVEVRRPFCNCLIDICMNQGFPSQRSNELLYLGTVFGLYQG 1259
E+ + IK EFR ++ +AVE RRPFCNCLIDIC N+ +R++ELLYLGT++GLY G
Sbjct: 552 EKVGFEAIKDEFRDVIGSTAVESRRPFCNCLIDICRNKN-KHERAHELLYLGTLYGLYPG 610
Query: 1260 LHVRKPDEWLLDLRSLSIGAAKTAFEEWMKNLLNSVEQEEILPQSFSIQAGSGTHKFSQG 1439
LH + +EW LD+RSLSIGAA TA EEWM L +++EE LP+ FS Q G+GTHKFSQG
Sbjct: 611 LHNKTANEWCLDVRSLSIGAAHTALEEWMGTLYKIIQREEALPKLFSAQTGAGTHKFSQG 670
Query: 1440 LASSFYTYLKKLAAPFRQG-NNSGNFVASKDDLISWLPSRAE 1562
LA SF +++KKLAAPFRQ +G FVA+++DL+SW+ S+A+
Sbjct: 671 LAHSFGSHVKKLAAPFRQSEEKAGCFVATREDLVSWVQSQAQ 712
>gb|EMJ11528.1| hypothetical protein PRUPE_ppa002049mg [Prunus persica]
Length = 724
Score = 681 bits (1756), Expect = 0.0
Identities = 331/521 (63%), Positives = 424/521 (81%), Gaps = 2/521 (0%)
Frame = +3
Query: 3 TIFYNVVFKSLRAARRWTPVEELAQQMIDAEVPLDNITYSTIISAAKRCRRFDEAISWFE 182
TIFYNV KSLR R++ +EELA++M+ E+ LDNITYSTII+ AKR + FD+A+ WFE
Sbjct: 199 TIFYNVTMKSLRFGRQFQLIEELAEEMVSNEIELDNITYSTIITCAKRSKLFDKAVEWFE 258
Query: 183 RMYRTGVVPDEVTYSVVLDVYAELGRREEVLALYDRARASGWRPDVVAFAVLGKMFGEAG 362
RMY+TG++PDEVTYS +LDVYA+LG+ EEVL+LY+R RASGW+PD +AF+VLGKMFGEAG
Sbjct: 259 RMYKTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGEAG 318
Query: 363 DYDGINYVLKEMKDLGVKANVVLYNTLIEATGKARRPGLARSLFEEMVAEGLSPNGKTLT 542
DYDGI YVL+EM LGV+ N+V+YNTL+EA GKA +PGLARSLFEEMV GL PN KTLT
Sbjct: 319 DYDGIRYVLQEMAALGVQPNLVVYNTLLEAMGKAGKPGLARSLFEEMVGSGLKPNEKTLT 378
Query: 543 SLIKIYGKARWSKDALGLWELMMANRWPMDFILYNTLLSMCADLGLEEEAEKLFEDMQRP 722
+L+KIYGKARW++DAL LWE M +N WPMDFILYNTLL+MCADLGLEEEA+KLFEDM++
Sbjct: 379 ALVKIYGKARWARDALELWERMRSNEWPMDFILYNTLLNMCADLGLEEEAKKLFEDMKQS 438
Query: 723 ERYIRPDSWSYTGMVNIYANGGKPDKALQMFDEMLHKGVQPNVMTYTCLIPCLGKAGRIA 902
E + RPDSWSYT M+NI+ +GG D A+ +F+EM G++ NVM TCLI CLGKA R +
Sbjct: 439 E-HCRPDSWSYTAMLNIFGSGGNVDGAMGLFEEMSELGIELNVMGCTCLIQCLGKARRFS 497
Query: 903 EAVKVFETAMDRGIQPDDRLCGCLLSVVALCKEGE-FDMLLACLDKANPRLVGLVKMLSD 1079
+ V+VF A++RG++PDDRLCGCLLSVV+LC++ E D +L+CL +ANP+LV LVK+L D
Sbjct: 498 DMVRVFGVAVERGVKPDDRLCGCLLSVVSLCEKTEDEDKVLSCLQQANPKLVTLVKVLQD 557
Query: 1080 EQCTIDEIKTEFRRIMNESAVEVRRPFCNCLIDICMNQGFPSQRSNELLYLGTVFGLYQG 1259
++ + IK EFR +++ ++VE RRPFCNCLIDIC N+ +R++ELLYLGT++GLY G
Sbjct: 558 KKLGFETIKDEFRDVISGTSVESRRPFCNCLIDICRNKN-NHERAHELLYLGTLYGLYPG 616
Query: 1260 LHVRKPDEWLLDLRSLSIGAAKTAFEEWMKNLLNSVEQEEILPQSFSIQAGSGTHKFSQG 1439
LH + EW LD+RSLSIGAA TA EEWM L V++EE LP+ FS Q G+GTHKFSQG
Sbjct: 617 LHNKTSREWCLDVRSLSIGAAHTALEEWMGTLYKIVQREEALPELFSAQTGTGTHKFSQG 676
Query: 1440 LASSFYTYLKKLAAPFRQG-NNSGNFVASKDDLISWLPSRA 1559
LA SF ++++KLAAPFR+ +G FVA+++DL+SW+ S+A
Sbjct: 677 LAHSFASHVEKLAAPFRKSEEKAGRFVATREDLVSWVQSQA 717
Score = 73.9 bits (180), Expect = 2e-10
Identities = 48/188 (25%), Positives = 93/188 (49%)
Frame = +3
Query: 420 NVVLYNTLIEATGKARRPGLARSLFEEMVAEGLSPNGKTLTSLIKIYGKARWSKDALGLW 599
+ + YN +++ R+ L L EEMV+ + + T +++I +++ A+ +
Sbjct: 198 DTIFYNVTMKSLRFGRQFQLIEELAEEMVSNEIELDNITYSTIITCAKRSKLFDKAVEWF 257
Query: 600 ELMMANRWPMDFILYNTLLSMCADLGLEEEAEKLFEDMQRPERYIRPDSWSYTGMVNIYA 779
E M D + Y+ +L + A LG EE L+E R + +PD +++ + ++
Sbjct: 258 ERMYKTGLMPDEVTYSAILDVYAKLGKVEEVLSLYE-RGRASGW-KPDPIAFSVLGKMFG 315
Query: 780 NGGKPDKALQMFDEMLHKGVQPNVMTYTCLIPCLGKAGRIAEAVKVFETAMDRGIQPDDR 959
G D + EM GVQPN++ Y L+ +GKAG+ A +FE + G++P+++
Sbjct: 316 EAGDYDGIRYVLQEMAALGVQPNLVVYNTLLEAMGKAGKPGLARSLFEEMVGSGLKPNEK 375
Query: 960 LCGCLLSV 983
L+ +
Sbjct: 376 TLTALVKI 383
>gb|EXB99769.1| hypothetical protein L484_023300 [Morus notabilis]
Length = 710
Score = 680 bits (1755), Expect = 0.0
Identities = 324/521 (62%), Positives = 422/521 (80%), Gaps = 2/521 (0%)
Frame = +3
Query: 3 TIFYNVVFKSLRAARRWTPVEELAQQMIDAEVPLDNITYSTIISAAKRCRRFDEAISWFE 182
TIFYNV KSLR R++ +EELA +MI ++ LDNITYSTII+ AKRC+ FD+A+ WFE
Sbjct: 186 TIFYNVTMKSLRFGRQFQLIEELANEMIRNDIELDNITYSTIITCAKRCKDFDKAVEWFE 245
Query: 183 RMYRTGVVPDEVTYSVVLDVYAELGRREEVLALYDRARASGWRPDVVAFAVLGKMFGEAG 362
RMY+TG++PDEVTYS +LDVYA+L + EEVL+LY+R RASGW+PD + FAVLGKMFGEAG
Sbjct: 246 RMYKTGMMPDEVTYSAILDVYAQLRKVEEVLSLYERGRASGWKPDAITFAVLGKMFGEAG 305
Query: 363 DYDGINYVLKEMKDLGVKANVVLYNTLIEATGKARRPGLARSLFEEMVAEGLSPNGKTLT 542
D+DGI YVL+EM LGV+ N+++YNTL+EA GKA +PG+ARSLFEEM+ GL+PN KTLT
Sbjct: 306 DFDGIRYVLQEMGSLGVEPNLIVYNTLLEAMGKAGKPGMARSLFEEMIESGLTPNEKTLT 365
Query: 543 SLIKIYGKARWSKDALGLWELMMANRWPMDFILYNTLLSMCADLGLEEEAEKLFEDMQRP 722
+L+K+YGKARW +DAL LWE M +N WP+DFILYNTLL+MCADLGLEEEAE+LFEDM+R
Sbjct: 366 ALVKVYGKARWGRDALELWERMRSNSWPVDFILYNTLLNMCADLGLEEEAERLFEDMKRS 425
Query: 723 ERYIRPDSWSYTGMVNIYANGGKPDKALQMFDEMLHKGVQPNVMTYTCLIPCLGKAGRIA 902
E RPDSWSYT M+NIY +GGK +KA++MFDEM GV+ NVM TCL+ CLGKA R+
Sbjct: 426 ES-SRPDSWSYTAMLNIYGSGGKVEKAMEMFDEMSELGVELNVMGCTCLVQCLGKAKRVD 484
Query: 903 EAVKVFETAMDRGIQPDDRLCGCLLSVVALCKE-GEFDMLLACLDKANPRLVGLVKMLSD 1079
+ V+VF +++G++PDDRLCGCLLSVV++C + G+ + +LACL +ANP+LV V++L
Sbjct: 485 DMVRVFSFVVEKGVRPDDRLCGCLLSVVSMCDDVGDEEKVLACLQQANPKLVVFVRLLQG 544
Query: 1080 EQCTIDEIKTEFRRIMNESAVEVRRPFCNCLIDICMNQGFPSQRSNELLYLGTVFGLYQG 1259
E+ + +K EFR +++++++E RRPFCNCLID+C N+G +R++ELLYLGT++GLY G
Sbjct: 545 EETSFKTVKDEFRSVISDTSIEARRPFCNCLIDMCRNRGH-HERAHELLYLGTLYGLYPG 603
Query: 1260 LHVRKPDEWLLDLRSLSIGAAKTAFEEWMKNLLNSVEQEEILPQSFSIQAGSGTHKFSQG 1439
LH + EW LD+RSLSIGAA+TA EEWM L V+++E LP+ FS Q G GTHKFSQG
Sbjct: 604 LHNKTAKEWCLDVRSLSIGAAQTALEEWMGTLYRIVQRKEELPELFSAQTGVGTHKFSQG 663
Query: 1440 LASSFYTYLKKLAAPFRQG-NNSGNFVASKDDLISWLPSRA 1559
LA+SF ++ +KLAAPFRQ +G FVA+++DL+SW SRA
Sbjct: 664 LANSFASHAEKLAAPFRQSEEKAGCFVATREDLVSWAQSRA 704
>ref|XP_006485434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Citrus sinensis]
Length = 730
Score = 673 bits (1737), Expect = 0.0
Identities = 325/520 (62%), Positives = 416/520 (80%), Gaps = 2/520 (0%)
Frame = +3
Query: 3 TIFYNVVFKSLRAARRWTPVEELAQQMIDAEVPLDNITYSTIISAAKRCRRFDEAISWFE 182
TIFYNV KSLR R++ +E+LA +M+ E+ LDNITYSTII+ AKRC FDEAI WFE
Sbjct: 207 TIFYNVTMKSLRFGRQFQLIEQLANEMVSNEIELDNITYSTIITCAKRCNLFDEAIEWFE 266
Query: 183 RMYRTGVVPDEVTYSVVLDVYAELGRREEVLALYDRARASGWRPDVVAFAVLGKMFGEAG 362
RMY+TG++PDEVTYS +LDVYA+ G+ EEVL+LY+R ASGW+PD +AF+VLGKMFGE+G
Sbjct: 267 RMYKTGLMPDEVTYSAILDVYAKSGKVEEVLSLYERGVASGWKPDPIAFSVLGKMFGESG 326
Query: 363 DYDGINYVLKEMKDLGVKANVVLYNTLIEATGKARRPGLARSLFEEMVAEGLSPNGKTLT 542
DYDGI YVL+EMK LGV+ N+V+YNTL+EA GKA +PGLARSLF+EMV GL+P+ KTLT
Sbjct: 327 DYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGLARSLFDEMVESGLTPDEKTLT 386
Query: 543 SLIKIYGKARWSKDALGLWELMMANRWPMDFILYNTLLSMCADLGLEEEAEKLFEDMQRP 722
+LIKIYGKARW+KDAL LWE M N+WPMDFILYNTLL+MCAD+GL EEAE+LFEDM+
Sbjct: 387 ALIKIYGKARWAKDALELWERMRENKWPMDFILYNTLLNMCADIGLVEEAERLFEDMKLS 446
Query: 723 ERYIRPDSWSYTGMVNIYANGGKPDKALQMFDEMLHKGVQPNVMTYTCLIPCLGKAGRIA 902
E Y +PDS+SYT M+NIY +GG DKA+++F+EM GV NVM TCLI CLGKA RI
Sbjct: 447 E-YCKPDSYSYTAMLNIYGSGGNVDKAIELFEEMSKLGVAVNVMGCTCLIQCLGKARRID 505
Query: 903 EAVKVFETAMDRGIQPDDRLCGCLLSVVALCKEGE-FDMLLACLDKANPRLVGLVKMLSD 1079
+ V+VF ++DRG++PDDRLCGCLLSVV+LC E D ++ CL +ANP+LV +K++ D
Sbjct: 506 DLVRVFGVSIDRGVKPDDRLCGCLLSVVSLCVTSEDVDKVITCLQQANPKLVAFLKLIED 565
Query: 1080 EQCTIDEIKTEFRRIMNESAVEVRRPFCNCLIDICMNQGFPSQRSNELLYLGTVFGLYQG 1259
+ IK EFR ++ ++ V+ RRPFCNCLIDIC N+ ++R++ELLYLGT++GLY G
Sbjct: 566 NCTGFENIKEEFRNVIKDTEVDARRPFCNCLIDICRNRNL-NERAHELLYLGTLYGLYPG 624
Query: 1260 LHVRKPDEWLLDLRSLSIGAAKTAFEEWMKNLLNSVEQEEILPQSFSIQAGSGTHKFSQG 1439
LH + DEW LD+RSLS+GAA+TA EEWM L V +EE+LPQ F + G+GTHKFSQG
Sbjct: 625 LHNKTLDEWSLDVRSLSVGAAQTALEEWMWTLAKIVRREEVLPQLFLAETGTGTHKFSQG 684
Query: 1440 LASSFYTYLKKLAAPFRQG-NNSGNFVASKDDLISWLPSR 1556
LA++F +++ KLAAPFRQ +G FVA+++DL+SW+ +R
Sbjct: 685 LATAFASHVNKLAAPFRQSEGKAGCFVATREDLVSWVQAR 724
>ref|XP_006398352.1| hypothetical protein EUTSA_v10000815mg [Eutrema salsugineum]
gi|557099441|gb|ESQ39805.1| hypothetical protein
EUTSA_v10000815mg [Eutrema salsugineum]
Length = 642
Score = 671 bits (1730), Expect = 0.0
Identities = 323/519 (62%), Positives = 419/519 (80%), Gaps = 1/519 (0%)
Frame = +3
Query: 3 TIFYNVVFKSLRAARRWTPVEELAQQMIDAEVPLDNITYSTIISAAKRCRRFDEAISWFE 182
TIFYNV KSLR R++ +EE+A +M+ V LDNITYSTII+ AKRC +D+AI WFE
Sbjct: 123 TIFYNVAMKSLRFGRQFQLIEEMALEMVKDGVVLDNITYSTIITCAKRCNLYDKAIEWFE 182
Query: 183 RMYRTGVVPDEVTYSVVLDVYAELGRREEVLALYDRARASGWRPDVVAFAVLGKMFGEAG 362
RMY+TG++PDEVTYS +LDVY++ GR EEVL+LY+RA A+GW+PD +AF+VLGKMFGEAG
Sbjct: 183 RMYKTGLMPDEVTYSAILDVYSKSGRVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAG 242
Query: 363 DYDGINYVLKEMKDLGVKANVVLYNTLIEATGKARRPGLARSLFEEMVAEGLSPNGKTLT 542
DYDGI YVL+EMK + VK NVV+YNTL+EA G+A +PGLARSLF EM+ GL+PN KTLT
Sbjct: 243 DYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLT 302
Query: 543 SLIKIYGKARWSKDALGLWELMMANRWPMDFILYNTLLSMCADLGLEEEAEKLFEDMQRP 722
+L+KIYGKARW+KDAL LWE M A +WPMDFILYNTLL+MCAD+GLEEEAE+LF+DM +
Sbjct: 303 ALVKIYGKARWAKDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFDDM-KV 361
Query: 723 ERYIRPDSWSYTGMVNIYANGGKPDKALQMFDEMLHKGVQPNVMTYTCLIPCLGKAGRIA 902
+PDS+SYT M+NIY +GGK +KA+++F+EML GVQ NVM TCL+ CLGKA RI
Sbjct: 362 SGQCKPDSFSYTAMLNIYGSGGKAEKAMKLFEEMLEAGVQVNVMGCTCLVQCLGKAKRID 421
Query: 903 EAVKVFETAMDRGIQPDDRLCGCLLSVVALCKEGE-FDMLLACLDKANPRLVGLVKMLSD 1079
+ V VF+ ++ RG++PDDRLCGCLLSV+ALC+ E + ++ACL++AN +LV VK+L D
Sbjct: 422 DLVNVFDLSIQRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANQKLVTFVKLLVD 481
Query: 1080 EQCTIDEIKTEFRRIMNESAVEVRRPFCNCLIDICMNQGFPSQRSNELLYLGTVFGLYQG 1259
E+ + +K EF+ ++NE+ VE RRPFCNCLIDIC + +R++ELLYLGT+FGLY G
Sbjct: 482 EKTEFETVKEEFKIVINETQVEARRPFCNCLIDICRGKK-RHERAHELLYLGTLFGLYPG 540
Query: 1260 LHVRKPDEWLLDLRSLSIGAAKTAFEEWMKNLLNSVEQEEILPQSFSIQAGSGTHKFSQG 1439
LH + EW LD+RSLS+GAA+TA EEWM+ L N V ++E LP+ F Q G+GTH+FSQG
Sbjct: 541 LHNKTVKEWSLDVRSLSVGAAETALEEWMRTLANIVRRQEDLPELFLAQTGTGTHRFSQG 600
Query: 1440 LASSFYTYLKKLAAPFRQGNNSGNFVASKDDLISWLPSR 1556
LA+SF ++L++LAAPFRQ + +G FVA+K+DL+ WL S+
Sbjct: 601 LANSFASHLQQLAAPFRQSDRAGIFVATKEDLVLWLESK 639
>ref|XP_004245879.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Solanum lycopersicum]
Length = 711
Score = 671 bits (1730), Expect = 0.0
Identities = 325/520 (62%), Positives = 414/520 (79%), Gaps = 1/520 (0%)
Frame = +3
Query: 3 TIFYNVVFKSLRAARRWTPVEELAQQMIDAEVPLDNITYSTIISAAKRCRRFDEAISWFE 182
TIFYNV KSLR R++ +EELA +MID+ V LDNITYSTII+ AKRC FD+A+ WFE
Sbjct: 190 TIFYNVAMKSLRFGRQFHQIEELAFEMIDSGVELDNITYSTIITCAKRCNLFDKAVEWFE 249
Query: 183 RMYRTGVVPDEVTYSVVLDVYAELGRREEVLALYDRARASGWRPDVVAFAVLGKMFGEAG 362
RMY+TG++PDEVTYS VLDVYA+LG+ EEV++LY+R RASGW PD VAFAVL K+FG AG
Sbjct: 250 RMYKTGLMPDEVTYSAVLDVYAQLGKVEEVMSLYERGRASGWTPDPVAFAVLAKVFGAAG 309
Query: 363 DYDGINYVLKEMKDLGVKANVVLYNTLIEATGKARRPGLARSLFEEMVAEGLSPNGKTLT 542
DYDGI +VL+EMK L V+ N+V+YNTL+EA GKA +PGLARSLFEEMV GL+P+ KTLT
Sbjct: 310 DYDGIRFVLQEMKALEVQPNLVVYNTLLEAMGKAGKPGLARSLFEEMVDSGLTPDAKTLT 369
Query: 543 SLIKIYGKARWSKDALGLWELMMANRWPMDFILYNTLLSMCADLGLEEEAEKLFEDMQRP 722
+LIKIYGKARW++DAL LWE M +N WPMDFILYNTLLSMCADLGLEEEAE LF DM+R
Sbjct: 370 ALIKIYGKARWARDALDLWERMKSNGWPMDFILYNTLLSMCADLGLEEEAETLFHDMRRS 429
Query: 723 ERYIRPDSWSYTGMVNIYANGGKPDKALQMFDEMLHKGVQPNVMTYTCLIPCLGKAGRIA 902
E R DSWSYT M+NIY + G +KA+ +F+EM G++ NVM TCL+ C G+A RI
Sbjct: 430 EN-CRLDSWSYTAMLNIYGSVGNAEKAMALFEEMSKVGIELNVMGCTCLVQCFGRAQRID 488
Query: 903 EAVKVFETAMDRGIQPDDRLCGCLLSVVALCKEGEFDMLLACLDKANPRLVGLVKMLSDE 1082
+ VKVFE ++ RG++PDDRLCGCLLSVV+ CK + D +LACL +ANPRLV VKML DE
Sbjct: 489 DLVKVFEVSVQRGVKPDDRLCGCLLSVVSYCKGDDADKVLACLQQANPRLVTFVKMLEDE 548
Query: 1083 QCTIDEIKTEFRRIMNESAVEVRRPFCNCLIDICMNQGFPSQRSNELLYLGTVFGLYQGL 1262
+ D +K EFR I+ ++ + RRPFCNCLIDIC + ++R++ELLYLGTV+GLY GL
Sbjct: 549 STSYDIVKEEFRSILTNTSDDARRPFCNCLIDICRKRN-RAERAHELLYLGTVYGLYPGL 607
Query: 1263 HVRKPDEWLLDLRSLSIGAAKTAFEEWMKNLLNSVEQEEILPQSFSIQAGSGTHKFSQGL 1442
H + P+EW L++R+LS+GAA+TAFEEWM+ L V+ EE LP+ S G+GTHKFSQGL
Sbjct: 608 HTKTPEEWRLNVRALSVGAAQTAFEEWMRTLAKIVQSEEPLPEVLSANTGAGTHKFSQGL 667
Query: 1443 ASSFYTYLKKLAAPFRQG-NNSGNFVASKDDLISWLPSRA 1559
A++F ++++K AAPF+Q +G F+A+++D++SW+ S+A
Sbjct: 668 ANAFASHVEKFAAPFKQSEEKAGFFIATREDVVSWVHSKA 707
>ref|XP_006352838.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Solanum tuberosum]
Length = 711
Score = 669 bits (1725), Expect = 0.0
Identities = 322/520 (61%), Positives = 414/520 (79%), Gaps = 1/520 (0%)
Frame = +3
Query: 3 TIFYNVVFKSLRAARRWTPVEELAQQMIDAEVPLDNITYSTIISAAKRCRRFDEAISWFE 182
TIFYNV KSLR R++ +EELA +MID+ + LDNITYSTII+ AKRC FD+A+ WFE
Sbjct: 190 TIFYNVAMKSLRFGRQFQQIEELAFEMIDSGIELDNITYSTIITCAKRCNLFDKAVEWFE 249
Query: 183 RMYRTGVVPDEVTYSVVLDVYAELGRREEVLALYDRARASGWRPDVVAFAVLGKMFGEAG 362
RMY+TG++PDEVTYS VLDVYA+LG+ EEV++LY+R RASGW PD VAFAVL K+FG AG
Sbjct: 250 RMYKTGLMPDEVTYSAVLDVYAQLGKVEEVMSLYERGRASGWTPDPVAFAVLAKVFGAAG 309
Query: 363 DYDGINYVLKEMKDLGVKANVVLYNTLIEATGKARRPGLARSLFEEMVAEGLSPNGKTLT 542
DYDGI +VL+EMK L V+ N+V+YNTL+EA GKA +PGLARSLFEEMV GL+P+ KTLT
Sbjct: 310 DYDGIRFVLQEMKALEVQPNLVVYNTLLEAMGKAGKPGLARSLFEEMVDSGLTPDAKTLT 369
Query: 543 SLIKIYGKARWSKDALGLWELMMANRWPMDFILYNTLLSMCADLGLEEEAEKLFEDMQRP 722
+LIKIYGKARW++DAL LWE M +N WPMDFILYNTLLSMCADLGLEEEAE LF DM++
Sbjct: 370 ALIKIYGKARWARDALDLWERMKSNGWPMDFILYNTLLSMCADLGLEEEAETLFHDMRKS 429
Query: 723 ERYIRPDSWSYTGMVNIYANGGKPDKALQMFDEMLHKGVQPNVMTYTCLIPCLGKAGRIA 902
+ R DSWSYT M+NIY + G +KA+ +F+EM G++ NVM TCL+ C G+A RI
Sbjct: 430 DN-CRLDSWSYTAMLNIYGSVGNAEKAMALFEEMSRVGIELNVMGCTCLVQCFGRAQRID 488
Query: 903 EAVKVFETAMDRGIQPDDRLCGCLLSVVALCKEGEFDMLLACLDKANPRLVGLVKMLSDE 1082
+ VKVFE ++ RG++PDDRLCGCLLSVV+ CK + D +LACL +ANPRLV VKML DE
Sbjct: 489 DLVKVFEISVQRGVKPDDRLCGCLLSVVSYCKGDDADKVLACLQQANPRLVTFVKMLEDE 548
Query: 1083 QCTIDEIKTEFRRIMNESAVEVRRPFCNCLIDICMNQGFPSQRSNELLYLGTVFGLYQGL 1262
+ D +K EFR I+ ++ + RRPFCNCLIDIC + ++R++ELLYLGTV+GLY GL
Sbjct: 549 STSYDIVKEEFRSILTNTSDDARRPFCNCLIDICRKRNL-AERAHELLYLGTVYGLYPGL 607
Query: 1263 HVRKPDEWLLDLRSLSIGAAKTAFEEWMKNLLNSVEQEEILPQSFSIQAGSGTHKFSQGL 1442
H + P+EW L++R+LS+GAA+TAFEEWM+ L V+ EE LP+ S G+GTHKFSQGL
Sbjct: 608 HTKTPEEWRLNVRALSVGAAQTAFEEWMRTLAKIVQSEEPLPEVLSANTGAGTHKFSQGL 667
Query: 1443 ASSFYTYLKKLAAPFRQG-NNSGNFVASKDDLISWLPSRA 1559
A++F ++++KLAAPF+Q +G F+A+++D++ W+ S+A
Sbjct: 668 ANAFASHVEKLAAPFKQSEEKAGFFIATREDVVLWVQSKA 707
>gb|EOY24047.1| Pentatricopeptide (PPR) repeat-containing protein [Theobroma cacao]
Length = 711
Score = 669 bits (1725), Expect = 0.0
Identities = 322/520 (61%), Positives = 418/520 (80%), Gaps = 2/520 (0%)
Frame = +3
Query: 3 TIFYNVVFKSLRAARRWTPVEELAQQMIDAEVPLDNITYSTIISAAKRCRRFDEAISWFE 182
TIFYNV KSLR R++ +EELA +M+ E+PLDNITYSTII+ AKRC FD+A+ WFE
Sbjct: 186 TIFYNVTMKSLRFGRQFELIEELANEMVSNEIPLDNITYSTIITCAKRCYLFDKAVEWFE 245
Query: 183 RMYRTGVVPDEVTYSVVLDVYAELGRREEVLALYDRARASGWRPDVVAFAVLGKMFGEAG 362
RMY+TG++PDEVTYS +LDVYA+LG+ EEVL LY+R ASGW+PD +AF+VL KMFGEAG
Sbjct: 246 RMYKTGLMPDEVTYSAILDVYAKLGKVEEVLNLYERGVASGWKPDPIAFSVLAKMFGEAG 305
Query: 363 DYDGINYVLKEMKDLGVKANVVLYNTLIEATGKARRPGLARSLFEEMVAEGLSPNGKTLT 542
DYDGI YVL+EMK GV+ N+V+YNTL+EA GKA +PGLAR+LFEE++ GL+PN KTLT
Sbjct: 306 DYDGIRYVLQEMKSFGVQPNLVVYNTLLEAMGKAGKPGLARNLFEELLESGLTPNEKTLT 365
Query: 543 SLIKIYGKARWSKDALGLWELMMANRWPMDFILYNTLLSMCADLGLEEEAEKLFEDMQRP 722
+L KIYGKARW+KDAL LWE M + +WPMDFILYNTLL+MCAD+GL EEAEKLF DM++
Sbjct: 366 ALAKIYGKARWAKDALELWEEMKSKKWPMDFILYNTLLNMCADVGLVEEAEKLFADMKQS 425
Query: 723 ERYIRPDSWSYTGMVNIYANGGKPDKALQMFDEMLHKGVQPNVMTYTCLIPCLGKAGRIA 902
E + PDSWSYT M+NIY +GG KA+++F+EM GV+ NVM TCLI CLGKA R+
Sbjct: 426 E-HCGPDSWSYTAMLNIYGSGGNVGKAMELFEEMSKVGVELNVMGSTCLIQCLGKARRMD 484
Query: 903 EAVKVFETAMDRGIQPDDRLCGCLLSVVALC-KEGEFDMLLACLDKANPRLVGLVKMLSD 1079
E V+VF ++++GI+PDDRLCGCLLSVV+LC K + D +LACL +ANPRLV VK++ +
Sbjct: 485 ELVRVFSVSVEQGIKPDDRLCGCLLSVVSLCEKREDMDKVLACLQQANPRLVAFVKLIEE 544
Query: 1080 EQCTIDEIKTEFRRIMNESAVEVRRPFCNCLIDICMNQGFPSQRSNELLYLGTVFGLYQG 1259
E+ ++D +K EF+ I++++ + RRPFCNCLIDIC ++ +R+++LLYLGTV+GLY G
Sbjct: 545 EKSSLDTVKEEFKGIISDTTDDARRPFCNCLIDICRSKNL-HERAHDLLYLGTVYGLYPG 603
Query: 1260 LHVRKPDEWLLDLRSLSIGAAKTAFEEWMKNLLNSVEQEEILPQSFSIQAGSGTHKFSQG 1439
LH + +EW LD+RSLS+GAA+TA EEWM L V++EE LP+ FS Q G+GTH+FSQG
Sbjct: 604 LHNKTVNEWSLDVRSLSVGAAQTALEEWMGTLAKIVKREEALPELFSAQTGTGTHRFSQG 663
Query: 1440 LASSFYTYLKKLAAPFRQG-NNSGNFVASKDDLISWLPSR 1556
L+++F ++LKKLA PFRQ +G FVA+++DL+ WL SR
Sbjct: 664 LSNAFASHLKKLAVPFRQSEEKAGCFVATREDLVLWLQSR 703
>ref|XP_006281680.1| hypothetical protein CARUB_v10027819mg [Capsella rubella]
gi|482550384|gb|EOA14578.1| hypothetical protein
CARUB_v10027819mg [Capsella rubella]
Length = 715
Score = 662 bits (1709), Expect = 0.0
Identities = 320/519 (61%), Positives = 414/519 (79%), Gaps = 1/519 (0%)
Frame = +3
Query: 3 TIFYNVVFKSLRAARRWTPVEELAQQMIDAEVPLDNITYSTIISAAKRCRRFDEAISWFE 182
TIFYNV KSLR R++ +EE+A +M+ V LDNITYSTII+ AKRC +++AI WFE
Sbjct: 191 TIFYNVTMKSLRFGRQFHLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFE 250
Query: 183 RMYRTGVVPDEVTYSVVLDVYAELGRREEVLALYDRARASGWRPDVVAFAVLGKMFGEAG 362
RMY+TG++PDEVTYS VLDVY++LG+ EEVL+LY+RA A+GW+PD VAF+VLGKMFGEAG
Sbjct: 251 RMYKTGLMPDEVTYSAVLDVYSKLGKVEEVLSLYERAVATGWKPDAVAFSVLGKMFGEAG 310
Query: 363 DYDGINYVLKEMKDLGVKANVVLYNTLIEATGKARRPGLARSLFEEMVAEGLSPNGKTLT 542
DYDGI YVL+EMK + VK NVV+YNTL+EA G+ARRPGLARSLF EM+ GL+PN KTLT
Sbjct: 311 DYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRARRPGLARSLFNEMLEAGLTPNEKTLT 370
Query: 543 SLIKIYGKARWSKDALGLWELMMANRWPMDFILYNTLLSMCADLGLEEEAEKLFEDMQRP 722
+L+KIYGKARW+KDAL LWE M WPMDFILYNTLL+MCAD+GLEEEAE+LF DM+
Sbjct: 371 ALVKIYGKARWAKDALQLWEEMKEKNWPMDFILYNTLLNMCADIGLEEEAERLFNDMKES 430
Query: 723 ERYIRPDSWSYTGMVNIYANGGKPDKALQMFDEMLHKGVQPNVMTYTCLIPCLGKAGRIA 902
+ +PD++SYT M+NIY +GGK +KA+Q+F+EML GV NVM TCL+ CLGKA RI
Sbjct: 431 AQ-SKPDNFSYTAMLNIYGSGGKAEKAMQLFEEMLEAGVPVNVMGCTCLVQCLGKAKRID 489
Query: 903 EAVKVFETAMDRGIQPDDRLCGCLLSVVALCKEGE-FDMLLACLDKANPRLVGLVKMLSD 1079
+ V VF+ ++ RG++PDDRLCGCLLSV+ALC+ E + ++ACL+KAN +LV V ++ D
Sbjct: 490 DLVYVFDLSIQRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLEKANQKLVTFVNLIVD 549
Query: 1080 EQCTIDEIKTEFRRIMNESAVEVRRPFCNCLIDICMNQGFPSQRSNELLYLGTVFGLYQG 1259
E + +K EF+ ++N + VE RRPFCNCLIDIC + +R++ELLYLGT+FGLY G
Sbjct: 550 ENTEFETVKEEFKLVINATQVEARRPFCNCLIDICRGKK-RHERAHELLYLGTLFGLYPG 608
Query: 1260 LHVRKPDEWLLDLRSLSIGAAKTAFEEWMKNLLNSVEQEEILPQSFSIQAGSGTHKFSQG 1439
LH + EW LD+RSLS+GAA+TA EEWM+ L + + ++E LP F Q G+GTH+FSQG
Sbjct: 609 LHNKTMKEWSLDVRSLSVGAAETALEEWMRTLASIIRRQEDLPDLFFAQTGTGTHRFSQG 668
Query: 1440 LASSFYTYLKKLAAPFRQGNNSGNFVASKDDLISWLPSR 1556
LA+SF +L++L+APFRQ + +G FVA+K+DL+SWL S+
Sbjct: 669 LANSFALHLQQLSAPFRQSDRAGIFVATKEDLVSWLESK 707
>ref|XP_002863397.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297309232|gb|EFH39656.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 711
Score = 661 bits (1706), Expect = 0.0
Identities = 317/519 (61%), Positives = 418/519 (80%), Gaps = 1/519 (0%)
Frame = +3
Query: 3 TIFYNVVFKSLRAARRWTPVEELAQQMIDAEVPLDNITYSTIISAAKRCRRFDEAISWFE 182
TIFYNV KSLR R++ +EE+A +M+ V LDNITYSTII+ AKRC +D+AI WFE
Sbjct: 186 TIFYNVTMKSLRFGRQFYLIEEMALEMVKDGVELDNITYSTIITCAKRCNFYDKAIEWFE 245
Query: 183 RMYRTGVVPDEVTYSVVLDVYAELGRREEVLALYDRARASGWRPDVVAFAVLGKMFGEAG 362
RMY+TG++PDEVTYS +LDVY++L + EEVL+LY+RA A+GW+PD +AF+VLGKMFGEAG
Sbjct: 246 RMYKTGLMPDEVTYSAILDVYSKLRKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAG 305
Query: 363 DYDGINYVLKEMKDLGVKANVVLYNTLIEATGKARRPGLARSLFEEMVAEGLSPNGKTLT 542
DYDGI YVL+EMK + VK NVV+YNTL+EA G+A +PGLARSLF EM+ GL+PN KTLT
Sbjct: 306 DYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLT 365
Query: 543 SLIKIYGKARWSKDALGLWELMMANRWPMDFILYNTLLSMCADLGLEEEAEKLFEDMQRP 722
+L+KIYGKARW+KDAL LWE M A +WPMDFILYNTLL+MCAD+GLEEEAE+LF DM+
Sbjct: 366 ALVKIYGKARWAKDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKES 425
Query: 723 ERYIRPDSWSYTGMVNIYANGGKPDKALQMFDEMLHKGVQPNVMTYTCLIPCLGKAGRIA 902
+ +PD++SYT M+NIY +GGK +KA+++F+EML GVQ NVM TCL+ CLGKA RI
Sbjct: 426 VQ-CKPDNFSYTAMLNIYGSGGKAEKAMKLFEEMLEAGVQVNVMGCTCLVQCLGKAKRID 484
Query: 903 EAVKVFETAMDRGIQPDDRLCGCLLSVVALCKEGE-FDMLLACLDKANPRLVGLVKMLSD 1079
+ V VF+ ++ RG++PDDRLCGCLLSV+ALC+ E + ++ACL++AN +LV V ++ D
Sbjct: 485 DLVYVFDLSIQRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANRKLVTFVNLIVD 544
Query: 1080 EQCTIDEIKTEFRRIMNESAVEVRRPFCNCLIDICMNQGFPSQRSNELLYLGTVFGLYQG 1259
E+ + +K EF+ ++N + VE RRPFCNCLIDIC + +R++ELLYLGT+FGLY G
Sbjct: 545 EKTEFETVKEEFKLVINATQVEARRPFCNCLIDICRGKK-RHERAHELLYLGTLFGLYPG 603
Query: 1260 LHVRKPDEWLLDLRSLSIGAAKTAFEEWMKNLLNSVEQEEILPQSFSIQAGSGTHKFSQG 1439
LH + EW LD+RSLS+GAA+TA EEWM+ L N ++++E LP+ F Q G+GTH+FSQG
Sbjct: 604 LHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEDLPELFLAQTGTGTHRFSQG 663
Query: 1440 LASSFYTYLKKLAAPFRQGNNSGNFVASKDDLISWLPSR 1556
LA+SF +L++L+APFRQ + +G FVA+K+DL+SWL S+
Sbjct: 664 LANSFALHLQQLSAPFRQSDRAGIFVATKEDLVSWLESK 702
>ref|XP_006385629.1| hypothetical protein POPTR_0003s08800g [Populus trichocarpa]
gi|550342759|gb|ERP63426.1| hypothetical protein
POPTR_0003s08800g [Populus trichocarpa]
Length = 721
Score = 661 bits (1705), Expect = 0.0
Identities = 320/520 (61%), Positives = 410/520 (78%), Gaps = 2/520 (0%)
Frame = +3
Query: 3 TIFYNVVFKSLRAARRWTPVEELAQQMIDAEVPLDNITYSTIISAAKRCRRFDEAISWFE 182
TIFYNV KSLR ++ +EELA +M+ E+ LDNITYSTII+ AK+C RFD+A+ WFE
Sbjct: 193 TIFYNVTMKSLRYGLQFDIIEELANEMVSNEIQLDNITYSTIITCAKKCSRFDKAVEWFE 252
Query: 183 RMYRTGVVPDEVTYSVVLDVYAELGRREEVLALYDRARASGWRPDVVAFAVLGKMFGEAG 362
RMY+TG++PDEVTYS +LDVYA+LG+ EEVL+LY+R ASGW+PD + F+VL KMFGEAG
Sbjct: 253 RMYKTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGVASGWKPDPITFSVLAKMFGEAG 312
Query: 363 DYDGINYVLKEMKDLGVKANVVLYNTLIEATGKARRPGLARSLFEEMVAEGLSPNGKTLT 542
DYDGI YVL+EMK LGV+ N+V+YNTL+EA GKA +PGLARSLFEEMV GL+P+ KTLT
Sbjct: 313 DYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGLARSLFEEMVDSGLTPSEKTLT 372
Query: 543 SLIKIYGKARWSKDALGLWELMMANRWPMDFILYNTLLSMCADLGLEEEAEKLFEDMQRP 722
+L KIYGKARW+KDA+ LWE M +N WPMDFILYNTLL+MCADLGL EEAE LFEDM+R
Sbjct: 373 ALAKIYGKARWAKDAMDLWERMRSNNWPMDFILYNTLLNMCADLGLVEEAEMLFEDMKRS 432
Query: 723 ERYIRPDSWSYTGMVNIYANGGKPDKALQMFDEMLHKGVQPNVMTYTCLIPCLGKAGRIA 902
E+ RPDSW++T M+NIY +GG DK++++F+EM G+ N+M TCL+ CLGKA RI
Sbjct: 433 EK-CRPDSWTFTAMLNIYGSGGNADKSMELFEEMSKLGIGLNIMGCTCLVQCLGKARRID 491
Query: 903 EAVKVFETAMDRGIQPDDRLCGCLLSVVALCKEGE-FDMLLACLDKANPRLVGLVKMLSD 1079
+ VKVF A+D G++ DDR CGCLLSV +LC E E +LACL +ANPRLV LV+++ +
Sbjct: 492 DLVKVFNVAIDGGVKLDDRFCGCLLSVASLCDESEDVAKVLACLKQANPRLVALVRLIEE 551
Query: 1080 EQCTIDEIKTEFRRIMNESAVEVRRPFCNCLIDICMNQGFPSQRSNELLYLGTVFGLYQG 1259
E+ + + +K EFR +++ + VE RRPFCNCLIDIC + R++ELLYLGT++GLY
Sbjct: 552 EETSFETLKEEFRAVVSGAVVETRRPFCNCLIDICRKRDLHG-RAHELLYLGTLYGLYPD 610
Query: 1260 LHVRKPDEWLLDLRSLSIGAAKTAFEEWMKNLLNSVEQEEILPQSFSIQAGSGTHKFSQG 1439
LH + EW LD+RSLS+GAA TA EEWM L V++ E LP+ FS GSGTHKFSQG
Sbjct: 611 LHHKTVKEWSLDVRSLSVGAAHTALEEWMGTLTKFVQRNEELPELFSAHTGSGTHKFSQG 670
Query: 1440 LASSFYTYLKKLAAPFRQG-NNSGNFVASKDDLISWLPSR 1556
LA+SF +++KKLAAPFRQ +G+FVA+++DL++W+ SR
Sbjct: 671 LANSFDSHVKKLAAPFRQSEERAGHFVATREDLVTWVQSR 710
>ref|NP_199470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180372|sp|Q9LS25.1|PP420_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g46580, chloroplastic; Flags: Precursor
gi|8885599|dbj|BAA97529.1| unnamed protein product
[Arabidopsis thaliana] gi|332008017|gb|AED95400.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 711
Score = 660 bits (1704), Expect = 0.0
Identities = 316/519 (60%), Positives = 416/519 (80%), Gaps = 1/519 (0%)
Frame = +3
Query: 3 TIFYNVVFKSLRAARRWTPVEELAQQMIDAEVPLDNITYSTIISAAKRCRRFDEAISWFE 182
TIFYNV KSLR R++ +EE+A +M+ V LDNITYSTII+ AKRC +++AI WFE
Sbjct: 186 TIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFE 245
Query: 183 RMYRTGVVPDEVTYSVVLDVYAELGRREEVLALYDRARASGWRPDVVAFAVLGKMFGEAG 362
RMY+TG++PDEVTYS +LDVY++ G+ EEVL+LY+RA A+GW+PD +AF+VLGKMFGEAG
Sbjct: 246 RMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAG 305
Query: 363 DYDGINYVLKEMKDLGVKANVVLYNTLIEATGKARRPGLARSLFEEMVAEGLSPNGKTLT 542
DYDGI YVL+EMK + VK NVV+YNTL+EA G+A +PGLARSLF EM+ GL+PN KTLT
Sbjct: 306 DYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLT 365
Query: 543 SLIKIYGKARWSKDALGLWELMMANRWPMDFILYNTLLSMCADLGLEEEAEKLFEDMQRP 722
+L+KIYGKARW++DAL LWE M A +WPMDFILYNTLL+MCAD+GLEEEAE+LF DM+
Sbjct: 366 ALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKES 425
Query: 723 ERYIRPDSWSYTGMVNIYANGGKPDKALQMFDEMLHKGVQPNVMTYTCLIPCLGKAGRIA 902
+ RPD++SYT M+NIY +GGK +KA+++F+EML GVQ NVM TCL+ CLGKA RI
Sbjct: 426 VQ-CRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRID 484
Query: 903 EAVKVFETAMDRGIQPDDRLCGCLLSVVALCKEGE-FDMLLACLDKANPRLVGLVKMLSD 1079
+ V VF+ ++ RG++PDDRLCGCLLSV+ALC+ E + ++ACL++AN +LV V ++ D
Sbjct: 485 DVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKKLVTFVNLIVD 544
Query: 1080 EQCTIDEIKTEFRRIMNESAVEVRRPFCNCLIDICMNQGFPSQRSNELLYLGTVFGLYQG 1259
E+ + +K EF+ ++N + VE RRPFCNCLIDIC +R++ELLYLGT+FGLY G
Sbjct: 545 EKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNN-RHERAHELLYLGTLFGLYPG 603
Query: 1260 LHVRKPDEWLLDLRSLSIGAAKTAFEEWMKNLLNSVEQEEILPQSFSIQAGSGTHKFSQG 1439
LH + EW LD+RSLS+GAA+TA EEWM+ L N ++++E LP+ F Q G+GTH+FSQG
Sbjct: 604 LHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQTGTGTHRFSQG 663
Query: 1440 LASSFYTYLKKLAAPFRQGNNSGNFVASKDDLISWLPSR 1556
LA+SF +L++L+APFRQ + G FVA+K+DL+SWL S+
Sbjct: 664 LANSFALHLQQLSAPFRQSDRPGIFVATKEDLVSWLESK 702
>ref|XP_004148730.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Cucumis sativus]
gi|449521148|ref|XP_004167592.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Cucumis sativus]
Length = 710
Score = 659 bits (1699), Expect = 0.0
Identities = 314/520 (60%), Positives = 412/520 (79%), Gaps = 2/520 (0%)
Frame = +3
Query: 3 TIFYNVVFKSLRAARRWTPVEELAQQMIDAEVPLDNITYSTIISAAKRCRRFDEAISWFE 182
TIFYNV KSLR R++ +E+LA +MI A + LDNITYSTII+ AK+C RFD+A+ WFE
Sbjct: 185 TIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCAKKCSRFDKAMEWFE 244
Query: 183 RMYRTGVVPDEVTYSVVLDVYAELGRREEVLALYDRARASGWRPDVVAFAVLGKMFGEAG 362
RMY+TG++PDEVTYS +LDVYA LG+ EEVL+LY+R RASGW PD F+VLGKMFGEAG
Sbjct: 245 RMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWTPDPYTFSVLGKMFGEAG 304
Query: 363 DYDGINYVLKEMKDLGVKANVVLYNTLIEATGKARRPGLARSLFEEMVAEGLSPNGKTLT 542
DYDGI YVL+EMK + ++ N+V+YNTL++A GKA +PG ARSLF+EMV G++PN KTLT
Sbjct: 305 DYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNEKTLT 364
Query: 543 SLIKIYGKARWSKDALGLWELMMANRWPMDFILYNTLLSMCADLGLEEEAEKLFEDMQRP 722
+L+KIYGKARW++DAL LWE M +N WPMDFILYNTLL+MCADLGLEEEAE LFE+M++
Sbjct: 365 ALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAETLFEEMKK- 423
Query: 723 ERYIRPDSWSYTGMVNIYANGGKPDKALQMFDEMLHKGVQPNVMTYTCLIPCLGKAGRIA 902
++ RPDSWSYT M+NIY +GG +++++F+EML GV+ NVM TCLI CLGK+GRI
Sbjct: 424 SKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKSGRID 483
Query: 903 EAVKVFETAMDRGIQPDDRLCGCLLSVVALCKEGE-FDMLLACLDKANPRLVGLVKMLSD 1079
+ V+VF ++ +GI+PDDRLCGCLLSV++LC E + + CL +ANP+LV + +L
Sbjct: 484 DLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNSEDINKVFTCLQQANPKLVSFINLLQQ 543
Query: 1080 EQCTIDEIKTEFRRIMNESAVEVRRPFCNCLIDICMNQGFPSQRSNELLYLGTVFGLYQG 1259
T + +K EFR I+ E+A E RRPFCNCLIDIC NQ +R++ELLYLG+++GLY G
Sbjct: 544 NDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNL-RERAHELLYLGSLYGLYPG 602
Query: 1260 LHVRKPDEWLLDLRSLSIGAAKTAFEEWMKNLLNSVEQEEILPQSFSIQAGSGTHKFSQG 1439
LH + EW LD+RSLS+GAA+TA EEWM L V++EE LP+ S Q G+GTH+FSQG
Sbjct: 603 LHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFSQG 662
Query: 1440 LASSFYTYLKKLAAPFR-QGNNSGNFVASKDDLISWLPSR 1556
LA+SF +++ KLAAPF+ + + +G FVA+++DL++W+ SR
Sbjct: 663 LANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSR 702
>ref|XP_006847699.1| hypothetical protein AMTR_s00149p00067630 [Amborella trichopoda]
gi|548850968|gb|ERN09280.1| hypothetical protein
AMTR_s00149p00067630 [Amborella trichopoda]
Length = 528
Score = 653 bits (1685), Expect = 0.0
Identities = 311/518 (60%), Positives = 404/518 (77%), Gaps = 1/518 (0%)
Frame = +3
Query: 3 TIFYNVVFKSLRAARRWTPVEELAQQMIDAEVPLDNITYSTIISAAKRCRRFDEAISWFE 182
TIFYNV+ KSLR ++W +EELA +MI+ + LDN++YSTII+ AKRC FD+AI WFE
Sbjct: 3 TIFYNVMMKSLRNGKQWEVLEELAMEMIEKGIQLDNVSYSTIITCAKRCNFFDKAIEWFE 62
Query: 183 RMYRTGVVPDEVTYSVVLDVYAELGRREEVLALYDRARASGWRPDVVAFAVLGKMFGEAG 362
RMYRTG++PDEVTYS +LDVYA+LG+ EEVL+LYDRARA GW PD V F+VLGKM+GE G
Sbjct: 63 RMYRTGLMPDEVTYSAILDVYAKLGKTEEVLSLYDRARADGWEPDAVTFSVLGKMYGEIG 122
Query: 363 DYDGINYVLKEMKDLGVKANVVLYNTLIEATGKARRPGLARSLFEEMVAEGLSPNGKTLT 542
DYDGI YVL+EM+ +G+K N+++YNTL+EA GKA +PGLARSLF+EM+ GL PN TLT
Sbjct: 123 DYDGIQYVLQEMRGIGIKPNLIVYNTLLEAMGKAGKPGLARSLFDEMIRSGLQPNVITLT 182
Query: 543 SLIKIYGKARWSKDALGLWELMMANRWPMDFILYNTLLSMCADLGLEEEAEKLFEDMQRP 722
+LIKIYGKARW++DA LWE + +N WP+DFILYNTLLSMCADLG EEEAEKLF+DM++
Sbjct: 183 ALIKIYGKARWARDAFELWEEIKSNNWPVDFILYNTLLSMCADLGREEEAEKLFDDMKKS 242
Query: 723 ERYIRPDSWSYTGMVNIYANGGKPDKALQMFDEMLHKGVQPNVMTYTCLIPCLGKAGRIA 902
E +PDSWSYT M+NIY NGG+ +KA ++F EML G + NVM++TCLI C G+A R
Sbjct: 243 E-LCKPDSWSYTAMLNIYCNGGEVEKAHELFREMLGSGNKLNVMSFTCLIQCYGRAKRFD 301
Query: 903 EAVKVFETAMDRGIQPDDRLCGCLLSVVALCKEGEFDMLLACLDKANPRLVGLVKMLSDE 1082
+ V+VF ++RG++PDDRLCGCLLSV+ K GEF +L CL+KAN RLV + +L E
Sbjct: 302 DVVEVFNIMVERGVRPDDRLCGCLLSVLTFSKNGEFGSVLICLEKANRRLVHFIDILDKE 361
Query: 1083 QCTIDEIKTEFRRIMNESAVEVRRPFCNCLIDICMNQGFPSQRSNELLYLGTVFGLYQGL 1262
+ T+D +K +FR I+NES VEVRRP+CNCLIDIC N+G ++R++ELLYLG +FGLY L
Sbjct: 362 EATLDMVKEKFREILNESVVEVRRPYCNCLIDICCNRGL-TKRAHELLYLGNLFGLYSNL 420
Query: 1263 HVRKPDEWLLDLRSLSIGAAKTAFEEWMKNLLNSVEQEEILPQSFSIQAGSGTHKFSQGL 1442
+ + EW L+LRSLS+GAA TAFEEW++ L+ +E E LP F+I G G K SQGL
Sbjct: 421 NTKTEMEWSLNLRSLSVGAAFTAFEEWLRALIEGIEHNERLPTCFAIHTGVGGRKLSQGL 480
Query: 1443 ASSFYTYLKKLAAPFRQG-NNSGNFVASKDDLISWLPS 1553
A S +LKK+ +PF+Q +G FVA++++++ W+ S
Sbjct: 481 ADSLSLHLKKMGSPFQQSEERAGWFVAAREEVVLWVRS 518
Score = 74.3 bits (181), Expect = 2e-10
Identities = 57/243 (23%), Positives = 106/243 (43%), Gaps = 36/243 (14%)
Frame = +3
Query: 420 NVVLYNTLIEATGKARRPGLARSL-----------------------------------F 494
+ + YN ++++ ++ + L F
Sbjct: 2 DTIFYNVMMKSLRNGKQWEVLEELAMEMIEKGIQLDNVSYSTIITCAKRCNFFDKAIEWF 61
Query: 495 EEMVAEGLSPNGKTLTSLIKIYGKARWSKDALGLWELMMANRWPMDFILYNTLLSMCADL 674
E M GL P+ T ++++ +Y K +++ L L++ A+ W D + ++ L M ++
Sbjct: 62 ERMYRTGLMPDEVTYSAILDVYAKLGKTEEVLSLYDRARADGWEPDAVTFSVLGKMYGEI 121
Query: 675 GLEEEAEKLFEDMQRPERYIRPDSWSYTGMVNIYANGGKPDKALQMFDEMLHKGVQPNVM 854
G + + + ++M+ I+P+ Y ++ GKP A +FDEM+ G+QPNV+
Sbjct: 122 GDYDGIQYVLQEMRGIG--IKPNLIVYNTLLEAMGKAGKPGLARSLFDEMIRSGLQPNVI 179
Query: 855 TYTCLIPCLGKAGRIAEAVKVFETAMDRGIQPDDRLCGCLLSVVA-LCKEGEFDMLLACL 1031
T T LI GKA +A +++E D L LLS+ A L +E E + L +
Sbjct: 180 TLTALIKIYGKARWARDAFELWEEIKSNNWPVDFILYNTLLSMCADLGREEEAEKLFDDM 239
Query: 1032 DKA 1040
K+
Sbjct: 240 KKS 242
>ref|XP_003524052.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Glycine max]
Length = 712
Score = 652 bits (1682), Expect = 0.0
Identities = 312/521 (59%), Positives = 411/521 (78%), Gaps = 2/521 (0%)
Frame = +3
Query: 3 TIFYNVVFKSLRAARRWTPVEELAQQMIDAEVPLDNITYSTIISAAKRCRRFDEAISWFE 182
TIFYNV KSLR +++ +E+LA QMID VPLDNITYSTIIS AK+C +D+A+ WFE
Sbjct: 189 TIFYNVTMKSLRFGKQFGLIEDLAHQMIDNGVPLDNITYSTIISCAKKCNLYDKAVHWFE 248
Query: 183 RMYRTGVVPDEVTYSVVLDVYAELGRREEVLALYDRARASGWRPDVVAFAVLGKMFGEAG 362
RMY+TG++PDEVTYS +LDVYA LG+ EEV++LY+R RA+GW+PD + F+VLGKMFGEAG
Sbjct: 249 RMYKTGLMPDEVTYSAILDVYARLGKVEEVISLYERGRATGWKPDPITFSVLGKMFGEAG 308
Query: 363 DYDGINYVLKEMKDLGVKANVVLYNTLIEATGKARRPGLARSLFEEMVAEGLSPNGKTLT 542
DYDGI YV +EM+ +GV+ N+V+YNTL+EA GKA +PG AR LFEEM+ G+ PN KTLT
Sbjct: 309 DYDGIRYVFQEMESVGVQPNLVVYNTLLEAMGKAGKPGFARGLFEEMIESGIVPNEKTLT 368
Query: 543 SLIKIYGKARWSKDALGLWELMMANRWPMDFILYNTLLSMCADLGLEEEAEKLFEDMQRP 722
++IKIYGKARWS+DAL LW+ M N WPMDFILYNTLL+MCAD+GL EEAE LF DM++
Sbjct: 369 AVIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ- 427
Query: 723 ERYIRPDSWSYTGMVNIYANGGKPDKALQMFDEMLHKGVQPNVMTYTCLIPCLGKAGRIA 902
+ +PDSWSYT M+NIY + G DKA+++FDEM GV+ NVM +TCLI CLG+A
Sbjct: 428 SVHCKPDSWSYTAMLNIYGSQGDVDKAMKLFDEMCKLGVELNVMGFTCLIQCLGRAMEFD 487
Query: 903 EAVKVFETAMDRGIQPDDRLCGCLLSVVALCK-EGEFDMLLACLDKANPRLVGLVKMLSD 1079
+ V+VF+ +++RGI+PDDRLCGCLLSVV+L + + + +LACL +ANP+LV + ++ D
Sbjct: 488 DLVRVFDISVERGIKPDDRLCGCLLSVVSLSQGSNDEEKVLACLQQANPKLVAFIHLIED 547
Query: 1080 EQCTIDEIKTEFRRIMNESAVEVRRPFCNCLIDICMNQGFPSQRSNELLYLGTVFGLYQG 1259
E+ + + +K EF+ IM+ +AVEVRRPFCNCLIDIC N+ +R++ELLYLGT++GLY G
Sbjct: 548 EKTSFETVKEEFKGIMSNAAVEVRRPFCNCLIDICRNKDL-LERAHELLYLGTLYGLYPG 606
Query: 1260 LHVRKPDEWLLDLRSLSIGAAKTAFEEWMKNLLNSVEQEEILPQSFSIQAGSGTHKFSQG 1439
LH + +EW LD+RSLS+GAA TA EEWM L V++EE LP+ F Q G+G HKF+QG
Sbjct: 607 LHNKTVEEWCLDVRSLSVGAALTALEEWMWTLTKIVKREETLPELFLAQTGTGAHKFAQG 666
Query: 1440 LASSFYTYLKKLAAPFRQGNNS-GNFVASKDDLISWLPSRA 1559
L SF ++L+KLAAPF+Q G F+AS++DL+SW+ S++
Sbjct: 667 LNISFASHLRKLAAPFKQSEEKVGCFIASREDLVSWVQSKS 707
>ref|XP_003608637.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509692|gb|AES90834.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 715
Score = 650 bits (1677), Expect = 0.0
Identities = 316/521 (60%), Positives = 409/521 (78%), Gaps = 2/521 (0%)
Frame = +3
Query: 3 TIFYNVVFKSLRAARRWTPVEELAQQMIDAEVPLDNITYSTIISAAKRCRRFDEAISWFE 182
TIFYNV KSLR R++ +EELA QMID V LDNITYSTIIS AK+C FD+A+ WFE
Sbjct: 190 TIFYNVTMKSLRFGRQFGIIEELAHQMIDGGVELDNITYSTIISCAKKCNLFDKAVYWFE 249
Query: 183 RMYRTGVVPDEVTYSVVLDVYAELGRREEVLALYDRARASGWRPDVVAFAVLGKMFGEAG 362
RMY+TG++PDEVT+S +LDVYA LG+ EEV+ L++R RA+GW+PD + F+VLGKMFGEAG
Sbjct: 250 RMYKTGLMPDEVTFSAILDVYARLGKVEEVVNLFERGRATGWKPDPITFSVLGKMFGEAG 309
Query: 363 DYDGINYVLKEMKDLGVKANVVLYNTLIEATGKARRPGLARSLFEEMVAEGLSPNGKTLT 542
DYDGI YVL+EMK LGV+ N+V+YNTL+EA GKA +PG ARSLFEEM+ G++PN KTLT
Sbjct: 310 DYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLT 369
Query: 543 SLIKIYGKARWSKDALGLWELMMANRWPMDFILYNTLLSMCADLGLEEEAEKLFEDMQRP 722
++IKIYGKARWSKDAL LW+ M N WPMDFILYNTLL+MCAD+GL EEAE LF DM++
Sbjct: 370 AVIKIYGKARWSKDALELWKRMKENGWPMDFILYNTLLNMCADVGLIEEAETLFRDMKQS 429
Query: 723 ERYIRPDSWSYTGMVNIYANGGKPDKALQMFDEMLHKGVQPNVMTYTCLIPCLGKAGRIA 902
E + +PDSWSYT M+NIY + G DKA+++F+EM G++ NVM TCLI CLGKA I
Sbjct: 430 E-HCKPDSWSYTAMLNIYGSEGAVDKAMKLFEEMSKFGIELNVMGCTCLIQCLGKAMEID 488
Query: 903 EAVKVFETAMDRGIQPDDRLCGCLLSVVALCK-EGEFDMLLACLDKANPRLVGLVKMLSD 1079
+ VKVF+ +++RG++PDDRLCGCLLSVV+L + + + +LACL +ANP+LV ++++ D
Sbjct: 489 DLVKVFDISVERGVKPDDRLCGCLLSVVSLSQGSKDQEKVLACLQRANPKLVAFIQLIVD 548
Query: 1080 EQCTIDEIKTEFRRIMNESAVEVRRPFCNCLIDICMNQGFPSQRSNELLYLGTVFGLYQG 1259
E+ + + +K EF+ IM+ + VEVRRPFCNCLIDIC N+ +R++ELLYLGT++G Y
Sbjct: 549 EETSFETVKEEFKAIMSNAVVEVRRPFCNCLIDICRNKDL-VERAHELLYLGTLYGFYPS 607
Query: 1260 LHVRKPDEWLLDLRSLSIGAAKTAFEEWMKNLLNSVEQEEILPQSFSIQAGSGTHKFSQG 1439
LH + EW LD+R+LS+GAA TA EEWM L V++EE LP F Q G+G HKF+QG
Sbjct: 608 LHNKTQYEWCLDVRTLSVGAALTALEEWMTTLTKIVKREEALPDLFLAQTGTGAHKFAQG 667
Query: 1440 LASSFYTYLKKLAAPFRQGNNS-GNFVASKDDLISWLPSRA 1559
L SF ++L+KLAAPFRQ + G F+A+K+DLISW+ S +
Sbjct: 668 LNISFASHLRKLAAPFRQSEDKVGCFIATKEDLISWVQSNS 708
>ref|XP_003559110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Brachypodium distachyon]
Length = 875
Score = 648 bits (1671), Expect = 0.0
Identities = 311/529 (58%), Positives = 402/529 (75%), Gaps = 6/529 (1%)
Frame = +3
Query: 3 TIFYNVVFKSLRAARRWTPVEELAQQMIDAEVPLDNITYSTIISAAKRCRRFDEAISWFE 182
TIF+NV KSLRAARRW E LA M+ + VPLDNITYST+I+AA+RCR+F +A+ WFE
Sbjct: 171 TIFFNVALKSLRAARRWAECERLALDMVASGVPLDNITYSTLITAARRCRQFAKAVEWFE 230
Query: 183 RMYRTG---VVPDEVTYSVVLDVYAELGRREEVLALYDRARASGWRPDVVAFAVLGKMFG 353
RMY G V+PDEVTYS VLDVYA+L +EEVLAL+DRAR SGW+PD VAFAVL KMFG
Sbjct: 231 RMYSPGGGGVLPDEVTYSAVLDVYAQLRMKEEVLALFDRARGSGWKPDHVAFAVLAKMFG 290
Query: 354 EAGDYDGINYVLKEMKDLGVKANVVLYNTLIEATGKARRPGLARSLFEEMVAEGLSPNGK 533
EAGDYDGI +V +EM+++G+K N+ +YN L+EA GK +PGLARSLFEEM AEG+ PN +
Sbjct: 291 EAGDYDGIQFVFREMREVGIKPNIFVYNALLEALGKTGKPGLARSLFEEMTAEGVEPNAR 350
Query: 534 TLTSLIKIYGKARWSKDALGLWELMMANRWPMDFILYNTLLSMCADLGLEEEAEKLFEDM 713
TLT++ KIYG+ARW +DAL LWE M + P D IL NTLLSMCAD+GL EAE+LFE+M
Sbjct: 351 TLTAVAKIYGRARWGRDALQLWEQMRQKKIPADSILCNTLLSMCADVGLVAEAEQLFEEM 410
Query: 714 QRPER--YIRPDSWSYTGMVNIYANGGKPDKALQMFDEMLHKGVQPNVMTYTCLIPCLGK 887
+ PE +PD WSYT M+NIY + D+ALQ+F EML +G++PN+M+YT +I CLGK
Sbjct: 411 KDPELSDVPKPDKWSYTAMINIYGSIKDADRALQLFAEMLAEGIEPNIMSYTIVIQCLGK 470
Query: 888 AGRIAEAVKVFETAMDRGIQPDDRLCGCLLSVVALCKEGEFDMLLACLDKANPRLVGLVK 1067
RI +A +V E ++RG++PDDRLCGCLLSVVAL E +++LACL+K N LV L++
Sbjct: 471 TNRIQDAAEVLEAGLERGLKPDDRLCGCLLSVVALSSGDETELMLACLEKVNRNLVKLIR 530
Query: 1068 MLSDEQCTIDEIKTEFRRIMNESAVEVRRPFCNCLIDICMNQGFPSQRSNELLYLGTVFG 1247
+L D Q +DE+K E + ++N + EVRRP+CNCLIDIC N GFP+ RS EL +L +G
Sbjct: 531 LLGDAQVGVDELKEELKAVLNAADSEVRRPYCNCLIDICQNHGFPAHRSGELFHLAQHYG 590
Query: 1248 LYQGLHVRKPDEWLLDLRSLSIGAAKTAFEEWMKNLLNSVEQEEILPQSFSIQAGSGTHK 1427
LY LH+RK +EWLLDLRSLS+GAAKTAF++WMK + Q + LP+ F++ GS THK
Sbjct: 591 LYSKLHIRKDEEWLLDLRSLSVGAAKTAFDDWMKTISERSAQGKPLPEFFNVFTGSSTHK 650
Query: 1428 FSQGLASSFYTYLKKLAAPFRQGNNS-GNFVASKDDLISWLPSRAEGGG 1571
F+QGLAS+F +L++ A PFR + G+FV+S+DDL+SWL + + G
Sbjct: 651 FAQGLASAFAVHLEETAVPFRPSESQVGSFVSSRDDLVSWLQTSSSSSG 699
Score = 72.4 bits (176), Expect = 7e-10
Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 38/228 (16%)
Frame = +3
Query: 420 NVVLYNTLIEATGKARRPGLARSLFEEMVAEGL--------------------------- 518
+ + +N +++ ARR L +MVA G+
Sbjct: 170 DTIFFNVALKSLRAARRWAECERLALDMVASGVPLDNITYSTLITAARRCRQFAKAVEWF 229
Query: 519 ----SPNG-------KTLTSLIKIYGKARWSKDALGLWELMMANRWPMDFILYNTLLSMC 665
SP G T ++++ +Y + R ++ L L++ + W D + + L M
Sbjct: 230 ERMYSPGGGGVLPDEVTYSAVLDVYAQLRMKEEVLALFDRARGSGWKPDHVAFAVLAKMF 289
Query: 666 ADLGLEEEAEKLFEDMQRPERYIRPDSWSYTGMVNIYANGGKPDKALQMFDEMLHKGVQP 845
+ G + + +F +M+ E I+P+ + Y ++ GKP A +F+EM +GV+P
Sbjct: 290 GEAGDYDGIQFVFREMR--EVGIKPNIFVYNALLEALGKTGKPGLARSLFEEMTAEGVEP 347
Query: 846 NVMTYTCLIPCLGKAGRIAEAVKVFETAMDRGIQPDDRLCGCLLSVVA 989
N T T + G+A +A++++E + I D LC LLS+ A
Sbjct: 348 NARTLTAVAKIYGRARWGRDALQLWEQMRQKKIPADSILCNTLLSMCA 395
>ref|XP_004980989.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Setaria italica]
Length = 780
Score = 646 bits (1667), Expect = 0.0
Identities = 308/519 (59%), Positives = 404/519 (77%), Gaps = 4/519 (0%)
Frame = +3
Query: 3 TIFYNVVFKSLRAARRWTPVEELAQQMIDAEVPLDNITYSTIISAAKRCRRFDEAISWFE 182
TIF+NV KSLRAAR+W E LA M+DA VPLDNITYST+I+AA+RCR F +A+ WFE
Sbjct: 251 TIFFNVALKSLRAARQWPHAERLALDMLDAGVPLDNITYSTLITAARRCRHFAKAVEWFE 310
Query: 183 RMYRT-GVVPDEVTYSVVLDVYAELGRREEVLALYDRARASGWRPDVVAFAVLGKMFGEA 359
RMY GV+PDEVTYS VLDVYA+LG +EEVLAL+DRAR SGW+PD VAFAVL KMFGEA
Sbjct: 311 RMYAADGVLPDEVTYSAVLDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEA 370
Query: 360 GDYDGINYVLKEMKDLGVKANVVLYNTLIEATGKARRPGLARSLFEEMVAEGLSPNGKTL 539
GDY+GI +V KEM+++G+K N+ +YN L+EA GK +PGLAR+LF+EM A+G+ PN +TL
Sbjct: 371 GDYEGIQFVFKEMQEVGIKPNIFVYNALLEALGKTGKPGLARNLFDEMTAQGVEPNARTL 430
Query: 540 TSLIKIYGKARWSKDALGLWELMMANRWPMDFILYNTLLSMCADLGLEEEAEKLFEDMQR 719
T+L KIYG+ARW +DAL LWE M + P D IL NTLLSMCAD+GL EAE+LF +M+
Sbjct: 431 TALAKIYGRARWGRDALQLWEQMREMKLPADNILCNTLLSMCADVGLVAEAEQLFNEMKD 490
Query: 720 PE--RYIRPDSWSYTGMVNIYANGGKPDKALQMFDEMLHKGVQPNVMTYTCLIPCLGKAG 893
PE +PD WSYT M+NIY + G D+ALQ+F EML G++PN+M+YT +I CLGKA
Sbjct: 491 PECRDVPKPDKWSYTAMINIYGSNGDTDQALQLFTEMLKGGIEPNIMSYTIVIQCLGKAQ 550
Query: 894 RIAEAVKVFETAMDRGIQPDDRLCGCLLSVVALCKEGEFDMLLACLDKANPRLVGLVKML 1073
RI +AV+V E +++G++PDDRLCGCLLSVVAL E +++L+ L+K N LV L++ML
Sbjct: 551 RIRQAVEVLEAGLEKGLKPDDRLCGCLLSVVALSSGEETEVVLSSLEKVNQNLVKLIRML 610
Query: 1074 SDEQCTIDEIKTEFRRIMNESAVEVRRPFCNCLIDICMNQGFPSQRSNELLYLGTVFGLY 1253
++Q +D++ E + ++N +A EVRRP+CNCLIDIC N GFP QR+ E+ L +GLY
Sbjct: 611 GEDQVGVDDLTKELKGVLNAAAPEVRRPYCNCLIDICQNHGFPPQRAREVFQLAHTYGLY 670
Query: 1254 QGLHVRKPDEWLLDLRSLSIGAAKTAFEEWMKNLLNSVEQEEILPQSFSIQAGSGTHKFS 1433
LH RK EW LDLRSLS+GAAKTAF++WM+ + + Q++ LP+SFS+ GS THKF+
Sbjct: 671 SKLHSRKDGEWSLDLRSLSVGAAKTAFDDWMQTISELLVQQKALPESFSVYTGSSTHKFA 730
Query: 1434 QGLASSFYTYLKKLAAPFRQG-NNSGNFVASKDDLISWL 1547
QGLAS+F T+L+++AAPFR ++ G+F++S+DDL+SWL
Sbjct: 731 QGLASAFATHLEQMAAPFRPSESHVGSFISSRDDLVSWL 769
>ref|NP_001051946.1| Os03g0856100 [Oryza sativa Japonica Group] gi|41393252|gb|AAS01975.1|
putative chloroplastic RNA-binding protein, with
alternative splicing isoforms [Oryza sativa Japonica
Group] gi|113550417|dbj|BAF13860.1| Os03g0856100 [Oryza
sativa Japonica Group] gi|222626198|gb|EEE60330.1|
hypothetical protein OsJ_13428 [Oryza sativa Japonica
Group]
Length = 640
Score = 646 bits (1667), Expect = 0.0
Identities = 308/519 (59%), Positives = 404/519 (77%), Gaps = 4/519 (0%)
Frame = +3
Query: 3 TIFYNVVFKSLRAARRWTPVEELAQQMIDAEVPLDNITYSTIISAAKRCRRFDEAISWFE 182
TI +NV KSLRAAR+W E LA M+ + VPLDNITYST+I+AA+RCR+FD+A+ WFE
Sbjct: 112 TIVFNVALKSLRAARQWPQAERLALDMLASGVPLDNITYSTLITAARRCRQFDKAVEWFE 171
Query: 183 RMYRT-GVVPDEVTYSVVLDVYAELGRREEVLALYDRARASGWRPDVVAFAVLGKMFGEA 359
RMY + GV+PDEVTYS +LDVYA+LG +EEVLAL+DRAR SGW+PD VAFAVL KMFGEA
Sbjct: 172 RMYASDGVLPDEVTYSAILDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEA 231
Query: 360 GDYDGINYVLKEMKDLGVKANVVLYNTLIEATGKARRPGLARSLFEEMVAEGLSPNGKTL 539
GDYDGI +V KEM+++G+K N+ +YN L+EA GK +PGLAR+LFEEM AEG+ PN +TL
Sbjct: 232 GDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKPGLARNLFEEMTAEGVEPNARTL 291
Query: 540 TSLIKIYGKARWSKDALGLWELMMANRWPMDFILYNTLLSMCADLGLEEEAEKLFEDMQR 719
T+L KIYG+ARW +DAL LWE M + P D IL NTLLSMCAD+GL EAE+LF +M+
Sbjct: 292 TALAKIYGRARWGRDALQLWEQMREKKLPADNILCNTLLSMCADVGLVGEAEQLFSEMKD 351
Query: 720 PER--YIRPDSWSYTGMVNIYANGGKPDKALQMFDEMLHKGVQPNVMTYTCLIPCLGKAG 893
P+ +PD WSYT M+NIY + G D+ALQ+F EM+ G++PN+M+YT +I CLGKAG
Sbjct: 352 PDLGDVPKPDKWSYTAMINIYGSSGDADRALQLFAEMVESGIEPNIMSYTIVIQCLGKAG 411
Query: 894 RIAEAVKVFETAMDRGIQPDDRLCGCLLSVVALCKEGEFDMLLACLDKANPRLVGLVKML 1073
RI EAV V E M +G++PDDRLCGCLLSVVAL E +++LACL+K LV L++ML
Sbjct: 412 RIQEAVDVLEAGMAKGLKPDDRLCGCLLSVVALSSGDETEVILACLEKVRSNLVKLIRML 471
Query: 1074 SDEQCTIDEIKTEFRRIMNESAVEVRRPFCNCLIDICMNQGFPSQRSNELLYLGTVFGLY 1253
D + +++++ E + I+N +A EVRRP+CNCLIDIC N G+PS+R+ EL L +GLY
Sbjct: 472 GDARVGVEDLRVELKGILNSAAPEVRRPYCNCLIDICRNHGYPSERAVELFRLARHYGLY 531
Query: 1254 QGLHVRKPDEWLLDLRSLSIGAAKTAFEEWMKNLLNSVEQEEILPQSFSIQAGSGTHKFS 1433
+H RK +EW LDLRSLS+GAAKTAF++WMK + E+EE LPQ+FS+ GS THKF+
Sbjct: 532 SKIHTRKEEEWSLDLRSLSVGAAKTAFDDWMKT-IREHEEEEALPQTFSVYTGSSTHKFA 590
Query: 1434 QGLASSFYTYLKKLAAPFRQGNNS-GNFVASKDDLISWL 1547
QGLA++ ++L+++ APFR ++ G+F++S+DDL+SWL
Sbjct: 591 QGLATAVASHLEQVGAPFRASDSQLGSFISSRDDLLSWL 629