BLASTX nr result
ID: Zingiber23_contig00003921
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00003921
(319 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB98286.1| Exosome complex component [Morus notabilis] 70 3e-10
gb|ESW23808.1| hypothetical protein PHAVU_004G077200g [Phaseolus... 69 6e-10
ref|XP_003548054.1| PREDICTED: exosome complex component RRP42-l... 67 3e-09
ref|XP_003518190.1| PREDICTED: exosome complex component RRP42-l... 67 3e-09
ref|XP_002882547.1| predicted protein [Arabidopsis lyrata subsp.... 67 3e-09
gb|EOY18763.1| 3'-5'-exoribonuclease family protein isoform 7 [T... 66 4e-09
gb|EOY18761.1| 3'-5'-exoribonuclease family protein isoform 5 [T... 66 4e-09
gb|EOY18758.1| 3'-5'-exoribonuclease family protein isoform 2 [T... 66 4e-09
gb|EOY18757.1| 3'-5'-exoribonuclease family protein isoform 1 [T... 66 4e-09
ref|XP_002285435.1| PREDICTED: exosome complex component RRP42 [... 66 4e-09
emb|CAN74168.1| hypothetical protein VITISV_005208 [Vitis vinifera] 66 4e-09
ref|XP_006407801.1| hypothetical protein EUTSA_v10021262mg [Eutr... 66 5e-09
gb|EPS58474.1| hypothetical protein M569_16340, partial [Genlise... 65 7e-09
ref|XP_006298255.1| hypothetical protein CARUB_v10014316mg [Caps... 65 7e-09
gb|AFK49136.1| unknown [Lotus japonicus] 65 7e-09
ref|XP_004498271.1| PREDICTED: exosome complex component RRP42-l... 65 9e-09
gb|ESW14525.1| hypothetical protein PHAVU_008G288600g [Phaseolus... 65 1e-08
ref|XP_006358364.1| PREDICTED: exosome complex exonuclease RRP42... 64 2e-08
ref|XP_004244581.1| PREDICTED: exosome complex exonuclease RRP42... 64 2e-08
ref|NP_566318.1| 3'-5'-exoribonuclease family protein [Arabidops... 64 2e-08
>gb|EXB98286.1| Exosome complex component [Morus notabilis]
Length = 256
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +1
Query: 205 MVGLSLGEKQFIHGGIAQDLRTDGRKRLHYRPISIETG 318
M+GLSLGEKQFI GGIAQDLR+DGRKRL YRPIS+ETG
Sbjct: 1 MLGLSLGEKQFIKGGIAQDLRSDGRKRLTYRPISVETG 38
>gb|ESW23808.1| hypothetical protein PHAVU_004G077200g [Phaseolus vulgaris]
Length = 286
Score = 68.9 bits (167), Expect = 6e-10
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +1
Query: 205 MVGLSLGEKQFIHGGIAQDLRTDGRKRLHYRPISIETG 318
MVGLSLGEK FI GGIAQDLR DGRKRL YRPIS+ETG
Sbjct: 1 MVGLSLGEKHFIQGGIAQDLRCDGRKRLAYRPISVETG 38
>ref|XP_003548054.1| PREDICTED: exosome complex component RRP42-like [Glycine max]
Length = 286
Score = 66.6 bits (161), Expect = 3e-09
Identities = 32/38 (84%), Positives = 33/38 (86%)
Frame = +1
Query: 205 MVGLSLGEKQFIHGGIAQDLRTDGRKRLHYRPISIETG 318
MVGLSLGE FI GGIAQDLR DGRKRL YRPIS+ETG
Sbjct: 1 MVGLSLGETHFIQGGIAQDLRCDGRKRLTYRPISVETG 38
>ref|XP_003518190.1| PREDICTED: exosome complex component RRP42-like [Glycine max]
Length = 286
Score = 66.6 bits (161), Expect = 3e-09
Identities = 32/38 (84%), Positives = 33/38 (86%)
Frame = +1
Query: 205 MVGLSLGEKQFIHGGIAQDLRTDGRKRLHYRPISIETG 318
MVGLSLGE FI GGIAQDLR DGRKRL YRPIS+ETG
Sbjct: 1 MVGLSLGETHFIQGGIAQDLRCDGRKRLTYRPISVETG 38
>ref|XP_002882547.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328387|gb|EFH58806.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 287
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = +1
Query: 205 MVGLSLGEKQFIHGGIAQDLRTDGRKRLHYRPISIETG 318
MVGLSLGE+ F+ GGIAQDLRTDGRKRL YRPI +ETG
Sbjct: 1 MVGLSLGEQHFVKGGIAQDLRTDGRKRLTYRPIYVETG 38
>gb|EOY18763.1| 3'-5'-exoribonuclease family protein isoform 7 [Theobroma cacao]
Length = 288
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = +1
Query: 205 MVGLSLGEKQFIHGGIAQDLRTDGRKRLHYRPISIETG 318
MVGLS+GEK FI GGIAQDLR+DGRKRL YRPI +ETG
Sbjct: 1 MVGLSVGEKHFIQGGIAQDLRSDGRKRLTYRPIYVETG 38
>gb|EOY18761.1| 3'-5'-exoribonuclease family protein isoform 5 [Theobroma cacao]
Length = 281
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = +1
Query: 205 MVGLSLGEKQFIHGGIAQDLRTDGRKRLHYRPISIETG 318
MVGLS+GEK FI GGIAQDLR+DGRKRL YRPI +ETG
Sbjct: 1 MVGLSVGEKHFIQGGIAQDLRSDGRKRLTYRPIYVETG 38
>gb|EOY18758.1| 3'-5'-exoribonuclease family protein isoform 2 [Theobroma cacao]
gi|508726862|gb|EOY18759.1| 3'-5'-exoribonuclease family
protein isoform 2 [Theobroma cacao]
Length = 287
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = +1
Query: 205 MVGLSLGEKQFIHGGIAQDLRTDGRKRLHYRPISIETG 318
MVGLS+GEK FI GGIAQDLR+DGRKRL YRPI +ETG
Sbjct: 1 MVGLSVGEKHFIQGGIAQDLRSDGRKRLTYRPIYVETG 38
>gb|EOY18757.1| 3'-5'-exoribonuclease family protein isoform 1 [Theobroma cacao]
Length = 283
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = +1
Query: 205 MVGLSLGEKQFIHGGIAQDLRTDGRKRLHYRPISIETG 318
MVGLS+GEK FI GGIAQDLR+DGRKRL YRPI +ETG
Sbjct: 1 MVGLSVGEKHFIQGGIAQDLRSDGRKRLTYRPIYVETG 38
>ref|XP_002285435.1| PREDICTED: exosome complex component RRP42 [Vitis vinifera]
gi|296082105|emb|CBI21110.3| unnamed protein product
[Vitis vinifera]
Length = 287
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = +1
Query: 205 MVGLSLGEKQFIHGGIAQDLRTDGRKRLHYRPISIETG 318
MVGLS+GEK FI GGIAQDLRTDGR+RL YRP ++ETG
Sbjct: 1 MVGLSVGEKHFIQGGIAQDLRTDGRRRLTYRPFNVETG 38
>emb|CAN74168.1| hypothetical protein VITISV_005208 [Vitis vinifera]
Length = 305
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = +1
Query: 205 MVGLSLGEKQFIHGGIAQDLRTDGRKRLHYRPISIETG 318
MVGLS+GEK FI GGIAQDLRTDGR+RL YRP ++ETG
Sbjct: 1 MVGLSVGEKHFIQGGIAQDLRTDGRRRLTYRPFNVETG 38
>ref|XP_006407801.1| hypothetical protein EUTSA_v10021262mg [Eutrema salsugineum]
gi|557108947|gb|ESQ49254.1| hypothetical protein
EUTSA_v10021262mg [Eutrema salsugineum]
Length = 287
Score = 65.9 bits (159), Expect = 5e-09
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = +1
Query: 205 MVGLSLGEKQFIHGGIAQDLRTDGRKRLHYRPISIETG 318
MVGLS+GE+ F+ GGIAQDLRTDGRKRL YRPI +ETG
Sbjct: 1 MVGLSIGEQHFVKGGIAQDLRTDGRKRLTYRPIYVETG 38
>gb|EPS58474.1| hypothetical protein M569_16340, partial [Genlisea aurea]
Length = 160
Score = 65.5 bits (158), Expect = 7e-09
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +1
Query: 205 MVGLSLGEKQFIHGGIAQDLRTDGRKRLHYRPISIETG 318
MVGLSLGE+ FI GGIAQDLR DGRKRL YRPI +ETG
Sbjct: 1 MVGLSLGEQNFIKGGIAQDLRNDGRKRLSYRPIFVETG 38
>ref|XP_006298255.1| hypothetical protein CARUB_v10014316mg [Capsella rubella]
gi|482566964|gb|EOA31153.1| hypothetical protein
CARUB_v10014316mg [Capsella rubella]
Length = 287
Score = 65.5 bits (158), Expect = 7e-09
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = +1
Query: 205 MVGLSLGEKQFIHGGIAQDLRTDGRKRLHYRPISIETG 318
MVGLS+GE+ F+ GGIAQDLRTDGRKRL YRPI +ETG
Sbjct: 1 MVGLSVGEQHFVKGGIAQDLRTDGRKRLAYRPIYVETG 38
>gb|AFK49136.1| unknown [Lotus japonicus]
Length = 286
Score = 65.5 bits (158), Expect = 7e-09
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +1
Query: 205 MVGLSLGEKQFIHGGIAQDLRTDGRKRLHYRPISIETG 318
MVGLSLGE+ FI GGIAQDLR DGRKRL YRPI +ETG
Sbjct: 1 MVGLSLGERHFIQGGIAQDLRCDGRKRLTYRPIYVETG 38
>ref|XP_004498271.1| PREDICTED: exosome complex component RRP42-like [Cicer arietinum]
Length = 286
Score = 65.1 bits (157), Expect = 9e-09
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +1
Query: 205 MVGLSLGEKQFIHGGIAQDLRTDGRKRLHYRPISIETG 318
MVGLSLGE+ FI GGIAQDLR DGRKRL YRPI +ETG
Sbjct: 1 MVGLSLGEQHFIQGGIAQDLRCDGRKRLTYRPIYVETG 38
>gb|ESW14525.1| hypothetical protein PHAVU_008G288600g [Phaseolus vulgaris]
gi|561015665|gb|ESW14526.1| hypothetical protein
PHAVU_008G288600g [Phaseolus vulgaris]
Length = 286
Score = 64.7 bits (156), Expect = 1e-08
Identities = 31/38 (81%), Positives = 32/38 (84%)
Frame = +1
Query: 205 MVGLSLGEKQFIHGGIAQDLRTDGRKRLHYRPISIETG 318
MVGLSLGEK FI GGIA DLR DGRKRL YRPI +ETG
Sbjct: 1 MVGLSLGEKHFIQGGIAHDLRCDGRKRLAYRPILVETG 38
>ref|XP_006358364.1| PREDICTED: exosome complex exonuclease RRP42-like [Solanum
tuberosum]
Length = 288
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/38 (78%), Positives = 33/38 (86%)
Frame = +1
Query: 205 MVGLSLGEKQFIHGGIAQDLRTDGRKRLHYRPISIETG 318
MVGLS+GE+ FI GGIAQDLR DGRKRL YRPI +ETG
Sbjct: 1 MVGLSVGERNFIKGGIAQDLRNDGRKRLTYRPIYVETG 38
>ref|XP_004244581.1| PREDICTED: exosome complex exonuclease RRP42-like [Solanum
lycopersicum]
Length = 314
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/38 (78%), Positives = 33/38 (86%)
Frame = +1
Query: 205 MVGLSLGEKQFIHGGIAQDLRTDGRKRLHYRPISIETG 318
MVGLS+GE+ FI GGIAQDLR DGRKRL YRPI +ETG
Sbjct: 27 MVGLSVGERNFIKGGIAQDLRNDGRKRLTYRPIYVETG 64
>ref|NP_566318.1| 3'-5'-exoribonuclease family protein [Arabidopsis thaliana]
gi|30680427|ref|NP_850537.1| 3'-5'-exoribonuclease
family protein [Arabidopsis thaliana]
gi|11762184|gb|AAG40370.1|AF325018_1 AT3g07750
[Arabidopsis thaliana] gi|26453010|dbj|BAC43581.1|
putative 3' exoribonuclease [Arabidopsis thaliana]
gi|56744222|gb|AAW28551.1| At3g07750 [Arabidopsis
thaliana] gi|332641077|gb|AEE74598.1|
3'-5'-exoribonuclease family protein [Arabidopsis
thaliana] gi|332641078|gb|AEE74599.1|
3'-5'-exoribonuclease family protein [Arabidopsis
thaliana]
Length = 286
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +1
Query: 208 VGLSLGEKQFIHGGIAQDLRTDGRKRLHYRPISIETG 318
+GLSLGE+ FI GGIAQDLRTDGRKRL YRPI +ETG
Sbjct: 1 MGLSLGEQHFIKGGIAQDLRTDGRKRLTYRPIYVETG 37