BLASTX nr result
ID: Zingiber23_contig00003810
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00003810
(278 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 pr... 92 5e-17
ref|XP_003531552.1| PREDICTED: chlorophyll a-b binding protein C... 92 9e-17
gb|ACU15016.1| unknown [Glycine max] 92 9e-17
ref|NP_001236415.1| uncharacterized protein LOC100527463 [Glycin... 91 2e-16
gb|AGV54678.1| chlorophyll A/B binding protein CP24 10A chloropl... 91 2e-16
ref|XP_004485563.1| PREDICTED: chlorophyll a-b binding protein C... 86 5e-15
ref|XP_004140973.1| PREDICTED: chlorophyll a-b binding protein C... 85 9e-15
dbj|BAI52949.1| light-harvesting complex II protein [Citrullus l... 80 2e-13
ref|XP_006351799.1| PREDICTED: chlorophyll a-b binding protein C... 80 4e-13
emb|CBI20065.3| unnamed protein product [Vitis vinifera] 79 5e-13
ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein C... 79 5e-13
gb|EOX98842.1| Light harvesting complex photosystem II subunit 6... 79 8e-13
gb|AFK41475.1| unknown [Lotus japonicus] 77 2e-12
gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotia... 76 4e-12
ref|XP_003531041.1| PREDICTED: chlorophyll a-b binding protein C... 75 9e-12
gb|ACU23773.1| unknown [Glycine max] 75 9e-12
sp|P36494.1|CB4_SPIOL RecName: Full=Chlorophyll a-b binding prot... 74 2e-11
ref|XP_003593177.1| Chloroplast chlorophyll a/b-binding protein ... 74 2e-11
gb|EXB97263.1| Chlorophyll a-b binding protein CP24 10A [Morus n... 73 3e-11
ref|XP_006494019.1| PREDICTED: chlorophyll a-b binding protein C... 72 6e-11
>gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 precursor [Vigna radiata]
Length = 258
Score = 92.4 bits (228), Expect = 5e-17
Identities = 49/67 (73%), Positives = 55/67 (82%), Gaps = 4/67 (5%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRSS-AVSSRRLIVVAAAAPKKSWLPGVRGGGNLV 220
VL GL + F+SG S+TLL +IGG+ AVS RRLIVVAAAAPKKSW+PGVRGGGNLV
Sbjct: 9 VLNGLGSSFLSGGSRSQTLLATSIGGKVGVAVSPRRLIVVAAAAPKKSWIPGVRGGGNLV 68
Query: 221 DPEWLDG 241
DPEWLDG
Sbjct: 69 DPEWLDG 75
>ref|XP_003531552.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
[Glycine max]
Length = 261
Score = 91.7 bits (226), Expect = 9e-17
Identities = 50/70 (71%), Positives = 54/70 (77%), Gaps = 7/70 (10%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRSSA----VSSRRLIVVAAAAPKKSWLPGVRGGG 211
VL GL + F+SG S+TLL IGG+ A VS RRLIVVAAAAPKKSWLPGVRGGG
Sbjct: 9 VLNGLGSSFLSGGNRSQTLLATAIGGKVGAAAVTVSPRRLIVVAAAAPKKSWLPGVRGGG 68
Query: 212 NLVDPEWLDG 241
NLVDPEWLDG
Sbjct: 69 NLVDPEWLDG 78
>gb|ACU15016.1| unknown [Glycine max]
Length = 247
Score = 91.7 bits (226), Expect = 9e-17
Identities = 50/70 (71%), Positives = 54/70 (77%), Gaps = 7/70 (10%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRSSA----VSSRRLIVVAAAAPKKSWLPGVRGGG 211
VL GL + F+SG S+TLL IGG+ A VS RRLIVVAAAAPKKSWLPGVRGGG
Sbjct: 9 VLNGLGSSFLSGGNRSQTLLATAIGGKVGAAAVTVSPRRLIVVAAAAPKKSWLPGVRGGG 68
Query: 212 NLVDPEWLDG 241
NLVDPEWLDG
Sbjct: 69 NLVDPEWLDG 78
>ref|NP_001236415.1| uncharacterized protein LOC100527463 [Glycine max]
gi|255632410|gb|ACU16555.1| unknown [Glycine max]
Length = 259
Score = 90.9 bits (224), Expect = 2e-16
Identities = 49/69 (71%), Positives = 54/69 (78%), Gaps = 6/69 (8%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRSSA---VSSRRLIVVAAAAPKKSWLPGVRGGGN 214
VL GL + F+SG S+TLL IGG+ A V+ RRLIVVAAAAPKKSWLPGVRGGGN
Sbjct: 9 VLNGLGSSFLSGGNRSQTLLATAIGGKVGAAVTVNPRRLIVVAAAAPKKSWLPGVRGGGN 68
Query: 215 LVDPEWLDG 241
LVDPEWLDG
Sbjct: 69 LVDPEWLDG 77
>gb|AGV54678.1| chlorophyll A/B binding protein CP24 10A chloroplastic [Phaseolus
vulgaris] gi|561021646|gb|ESW20417.1| hypothetical
protein PHAVU_006G207300g [Phaseolus vulgaris]
Length = 258
Score = 90.5 bits (223), Expect = 2e-16
Identities = 49/67 (73%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRSS-AVSSRRLIVVAAAAPKKSWLPGVRGGGNLV 220
VL GL + F+SG S+TLL IGG+ AVS RRLIVVAAAAPKKSWLPGVR GGNLV
Sbjct: 9 VLNGLGSSFLSGGSRSQTLLATAIGGKLGVAVSPRRLIVVAAAAPKKSWLPGVRAGGNLV 68
Query: 221 DPEWLDG 241
DPEWLDG
Sbjct: 69 DPEWLDG 75
>ref|XP_004485563.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
chloroplastic-like [Cicer arietinum]
Length = 260
Score = 85.9 bits (211), Expect = 5e-15
Identities = 46/69 (66%), Positives = 55/69 (79%), Gaps = 6/69 (8%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNAT-IGGR--SSAVSSRRLIVVAAAAPKKSWLPGVRGGGN 214
VL GL + F+ G S+TLL AT IGG+ ++AVS RRL+V AAAAPKKSW+PGVRGGGN
Sbjct: 9 VLNGLGSSFLCGGKRSQTLLLATAIGGKVGAAAVSPRRLVVAAAAAPKKSWIPGVRGGGN 68
Query: 215 LVDPEWLDG 241
+DPEWLDG
Sbjct: 69 FIDPEWLDG 77
>ref|XP_004140973.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
chloroplastic-like [Cucumis sativus]
gi|449497079|ref|XP_004160305.1| PREDICTED: chlorophyll
a-b binding protein CP24 10A, chloroplastic-like
[Cucumis sativus]
Length = 255
Score = 85.1 bits (209), Expect = 9e-15
Identities = 45/66 (68%), Positives = 51/66 (77%), Gaps = 3/66 (4%)
Frame = +2
Query: 53 VLQGLSTPFVSGS---RTLLNATIGGRSSAVSSRRLIVVAAAAPKKSWLPGVRGGGNLVD 223
VL GL +PF+ GS RTLL A G + VSS +L++VAAA PKKSWLPGVRGGGNLVD
Sbjct: 8 VLTGLGSPFLRGSSRTRTLL-AGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVD 66
Query: 224 PEWLDG 241
PEWLDG
Sbjct: 67 PEWLDG 72
>dbj|BAI52949.1| light-harvesting complex II protein [Citrullus lanatus subsp.
vulgaris]
Length = 255
Score = 80.5 bits (197), Expect = 2e-13
Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 3/66 (4%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRSSAVSSRRLIVVAAAAPKKSWLPGVRGGGNLVD 223
VL GL +PF+ G ++TLL GG + V SR+L+VVAAA PKKSW+P V+GGGNL+D
Sbjct: 8 VLNGLGSPFLRGGSRTQTLLAGARGG-VNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLID 66
Query: 224 PEWLDG 241
PEWLDG
Sbjct: 67 PEWLDG 72
>ref|XP_006351799.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
chloroplastic-like [Solanum tuberosum]
Length = 256
Score = 79.7 bits (195), Expect = 4e-13
Identities = 39/66 (59%), Positives = 48/66 (72%), Gaps = 3/66 (4%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRSSAVSSRRLIVVAAAAPKKSWLPGVRGGGNLVD 223
VL GLS+ F++G S+ LL A + R ++ + +V AAAPKKSWLPGVRGGGNLVD
Sbjct: 8 VLNGLSSSFLTGGKKSQALLAAPLAARVGGAATPKRFIVVAAAPKKSWLPGVRGGGNLVD 67
Query: 224 PEWLDG 241
PEWLDG
Sbjct: 68 PEWLDG 73
>emb|CBI20065.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 79.3 bits (194), Expect = 5e-13
Identities = 39/67 (58%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRS-SAVSSRRLIVVAAAAPKKSWLPGVRGGGNLV 220
VL GL +PF++G S++LL+A + ++ +AV + R ++V AAAPKKSWLPGV+ GGNLV
Sbjct: 8 VLNGLGSPFLTGGKRSQSLLSAGVAAKAGAAVPAPRRLIVVAAAPKKSWLPGVKAGGNLV 67
Query: 221 DPEWLDG 241
DPEWLDG
Sbjct: 68 DPEWLDG 74
>ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
[Vitis vinifera] gi|147804704|emb|CAN71620.1|
hypothetical protein VITISV_015544 [Vitis vinifera]
Length = 257
Score = 79.3 bits (194), Expect = 5e-13
Identities = 39/67 (58%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRS-SAVSSRRLIVVAAAAPKKSWLPGVRGGGNLV 220
VL GL +PF++G S++LL+A + ++ +AV + R ++V AAAPKKSWLPGV+ GGNLV
Sbjct: 8 VLNGLGSPFLTGGKRSQSLLSAGVAAKAGAAVPAPRRLIVVAAAPKKSWLPGVKAGGNLV 67
Query: 221 DPEWLDG 241
DPEWLDG
Sbjct: 68 DPEWLDG 74
>gb|EOX98842.1| Light harvesting complex photosystem II subunit 6 [Theobroma cacao]
Length = 254
Score = 78.6 bits (192), Expect = 8e-13
Identities = 38/66 (57%), Positives = 50/66 (75%), Gaps = 3/66 (4%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRSSAVSSRRLIVVAAAAPKKSWLPGVRGGGNLVD 223
V+ GL +PF+ G S+ LL A + + A +R+L+VVAAAAPKKSW+PGVRGGGN ++
Sbjct: 8 VINGLGSPFLCGGKRSQALLGARVA--TPASGTRKLVVVAAAAPKKSWIPGVRGGGNFIN 65
Query: 224 PEWLDG 241
PEWLDG
Sbjct: 66 PEWLDG 71
>gb|AFK41475.1| unknown [Lotus japonicus]
Length = 260
Score = 77.0 bits (188), Expect = 2e-12
Identities = 42/68 (61%), Positives = 52/68 (76%), Gaps = 5/68 (7%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRS-SAVSSRRLIVVAAAA-PKKSWLPGVRGGGNL 217
VL GL + F+ G S+TLL + G ++ +AVS +RLIV AAAA PKKSW+P V+GGGNL
Sbjct: 10 VLNGLGSSFLCGGNRSQTLLASAAGAKAGAAVSPKRLIVAAAAAAPKKSWIPAVKGGGNL 69
Query: 218 VDPEWLDG 241
VDPEWLDG
Sbjct: 70 VDPEWLDG 77
>gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotiana tabacum]
Length = 257
Score = 76.3 bits (186), Expect = 4e-12
Identities = 38/67 (56%), Positives = 50/67 (74%), Gaps = 4/67 (5%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRSSAVSS-RRLIVVAAAAPKKSWLPGVRGGGNLV 220
VL GLS+ F++G S+ LL A + R +++ +R IV AAAAPKKSW+P V+GGGNL+
Sbjct: 8 VLNGLSSSFLTGGKNSQALLGAPVAARIGGLATPKRCIVAAAAAPKKSWIPAVKGGGNLL 67
Query: 221 DPEWLDG 241
DPEWLDG
Sbjct: 68 DPEWLDG 74
>ref|XP_003531041.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
chloroplastic-like isoform 1 [Glycine max]
Length = 258
Score = 75.1 bits (183), Expect = 9e-12
Identities = 38/67 (56%), Positives = 48/67 (71%), Gaps = 4/67 (5%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRSSA-VSSRRLIVVAAAAPKKSWLPGVRGGGNLV 220
VL G + F+ G S LL A+IGG+ A VS +R+IV AAAPKKSW+P V+GGG+ +
Sbjct: 9 VLNGFGSHFLCGGKRSHALLAASIGGKVGASVSPKRVIVAVAAAPKKSWIPAVKGGGSFI 68
Query: 221 DPEWLDG 241
DPEWLDG
Sbjct: 69 DPEWLDG 75
>gb|ACU23773.1| unknown [Glycine max]
Length = 258
Score = 75.1 bits (183), Expect = 9e-12
Identities = 38/67 (56%), Positives = 48/67 (71%), Gaps = 4/67 (5%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRSSA-VSSRRLIVVAAAAPKKSWLPGVRGGGNLV 220
VL G + F+ G S LL A+IGG+ A VS +R+IV AAAPKKSW+P V+GGG+ +
Sbjct: 9 VLNGFGSHFLCGGKRSHALLAASIGGKVGASVSPKRVIVAVAAAPKKSWIPAVKGGGSFI 68
Query: 221 DPEWLDG 241
DPEWLDG
Sbjct: 69 DPEWLDG 75
>sp|P36494.1|CB4_SPIOL RecName: Full=Chlorophyll a-b binding protein CP24, chloroplastic;
Flags: Precursor gi|437991|emb|CAA81105.1| 20 kDa
protein of CP24 precursor protein [Spinacia oleracea]
Length = 261
Score = 74.3 bits (181), Expect = 2e-11
Identities = 35/69 (50%), Positives = 50/69 (72%), Gaps = 6/69 (8%)
Frame = +2
Query: 53 VLQGLSTPFVSG----SRTLL--NATIGGRSSAVSSRRLIVVAAAAPKKSWLPGVRGGGN 214
++ G ++PF+SG S++LL N+ +G S S + ++V AAAAPKKSW+P V+GGGN
Sbjct: 10 IVNGFTSPFLSGGKKSSQSLLFVNSKVGAGVSTTSRKLVVVAAAAAPKKSWIPAVKGGGN 69
Query: 215 LVDPEWLDG 241
+DPEWLDG
Sbjct: 70 FLDPEWLDG 78
>ref|XP_003593177.1| Chloroplast chlorophyll a/b-binding protein CP24 [Medicago
truncatula] gi|355482225|gb|AES63428.1| Chloroplast
chlorophyll a/b-binding protein CP24 [Medicago
truncatula]
Length = 261
Score = 73.9 bits (180), Expect = 2e-11
Identities = 44/70 (62%), Positives = 49/70 (70%), Gaps = 7/70 (10%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRSSAV---SSRRLIVVAAA-APKKSWLPGVRGGG 211
VL GL + F+SG S+TLL T G V S +RLIV AAA APKKSW+PGVR GG
Sbjct: 9 VLNGLGSSFLSGGKRSQTLLATTAIGAKVGVAAGSPKRLIVAAAASAPKKSWIPGVRFGG 68
Query: 212 NLVDPEWLDG 241
NLVDPEWLDG
Sbjct: 69 NLVDPEWLDG 78
>gb|EXB97263.1| Chlorophyll a-b binding protein CP24 10A [Morus notabilis]
Length = 257
Score = 73.2 bits (178), Expect = 3e-11
Identities = 39/67 (58%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Frame = +2
Query: 53 VLQGLSTPFVSGS----RTLLNATIGGRSSAVSSRRLIVVAAAAPKKSWLPGVRGGGNLV 220
VL GL + F+ GS R L +A S S + +VAAAAPKKSWLPGVR GGNLV
Sbjct: 8 VLNGLGSSFLRGSKRSSRALFSAAAKTTSGNNVSPKRFIVAAAAPKKSWLPGVRAGGNLV 67
Query: 221 DPEWLDG 241
DPEWLDG
Sbjct: 68 DPEWLDG 74
>ref|XP_006494019.1| PREDICTED: chlorophyll a-b binding protein CP24 10B,
chloroplastic-like [Citrus sinensis]
Length = 253
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/63 (50%), Positives = 45/63 (71%)
Frame = +2
Query: 53 VLQGLSTPFVSGSRTLLNATIGGRSSAVSSRRLIVVAAAAPKKSWLPGVRGGGNLVDPEW 232
VL GL + F++G + A + G + SS++ +VVAA PKKSW+P V+GGGNL++PEW
Sbjct: 9 VLNGLGSSFINGGKKS-QALLAGTNRVTSSKKSVVVAALPPKKSWIPAVKGGGNLINPEW 67
Query: 233 LDG 241
LDG
Sbjct: 68 LDG 70