BLASTX nr result
ID: Zingiber23_contig00003809
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00003809
(265 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI20065.3| unnamed protein product [Vitis vinifera] 77 2e-12
ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein C... 77 2e-12
gb|EXB97263.1| Chlorophyll a-b binding protein CP24 10A [Morus n... 76 4e-12
ref|XP_006351799.1| PREDICTED: chlorophyll a-b binding protein C... 76 5e-12
ref|XP_004140973.1| PREDICTED: chlorophyll a-b binding protein C... 75 7e-12
gb|AGV54678.1| chlorophyll A/B binding protein CP24 10A chloropl... 74 3e-11
ref|XP_006351797.1| PREDICTED: chlorophyll a-b binding protein C... 72 1e-10
dbj|BAI52949.1| light-harvesting complex II protein [Citrullus l... 72 1e-10
ref|XP_003531552.1| PREDICTED: chlorophyll a-b binding protein C... 71 2e-10
ref|NP_001236415.1| uncharacterized protein LOC100527463 [Glycin... 71 2e-10
gb|ACU15016.1| unknown [Glycine max] 71 2e-10
gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 pr... 70 3e-10
ref|XP_004230588.1| PREDICTED: chlorophyll a-b binding protein C... 70 4e-10
gb|EPS71396.1| hypothetical protein M569_03363 [Genlisea aurea] 70 4e-10
ref|XP_003593177.1| Chloroplast chlorophyll a/b-binding protein ... 69 5e-10
gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotia... 69 5e-10
gb|EMJ24688.1| hypothetical protein PRUPE_ppa010195mg [Prunus pe... 68 1e-09
ref|XP_004230586.1| PREDICTED: chlorophyll a-b binding protein C... 68 1e-09
gb|EOX98842.1| Light harvesting complex photosystem II subunit 6... 68 1e-09
ref|XP_004485563.1| PREDICTED: chlorophyll a-b binding protein C... 68 1e-09
>emb|CBI20065.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 77.4 bits (189), Expect = 2e-12
Identities = 42/74 (56%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Frame = +2
Query: 56 VLQGLSTPFLSG---SRTLLNA-TXXXXXXXXXXXXXXXXXXXXPKKSWLPGVKAGGNLV 223
VL GL +PFL+G S++LL+A PKKSWLPGVKAGGNLV
Sbjct: 8 VLNGLGSPFLTGGKRSQSLLSAGVAAKAGAAVPAPRRLIVVAAAPKKSWLPGVKAGGNLV 67
Query: 224 DPEWLDGSLPGDYG 265
DPEWLDGSLPGDYG
Sbjct: 68 DPEWLDGSLPGDYG 81
>ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
[Vitis vinifera] gi|147804704|emb|CAN71620.1|
hypothetical protein VITISV_015544 [Vitis vinifera]
Length = 257
Score = 77.4 bits (189), Expect = 2e-12
Identities = 42/74 (56%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Frame = +2
Query: 56 VLQGLSTPFLSG---SRTLLNA-TXXXXXXXXXXXXXXXXXXXXPKKSWLPGVKAGGNLV 223
VL GL +PFL+G S++LL+A PKKSWLPGVKAGGNLV
Sbjct: 8 VLNGLGSPFLTGGKRSQSLLSAGVAAKAGAAVPAPRRLIVVAAAPKKSWLPGVKAGGNLV 67
Query: 224 DPEWLDGSLPGDYG 265
DPEWLDGSLPGDYG
Sbjct: 68 DPEWLDGSLPGDYG 81
>gb|EXB97263.1| Chlorophyll a-b binding protein CP24 10A [Morus notabilis]
Length = 257
Score = 76.3 bits (186), Expect = 4e-12
Identities = 40/74 (54%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Frame = +2
Query: 56 VLQGLSTPFLSGS----RTLLNATXXXXXXXXXXXXXXXXXXXXPKKSWLPGVKAGGNLV 223
VL GL + FL GS R L +A PKKSWLPGV+AGGNLV
Sbjct: 8 VLNGLGSSFLRGSKRSSRALFSAAAKTTSGNNVSPKRFIVAAAAPKKSWLPGVRAGGNLV 67
Query: 224 DPEWLDGSLPGDYG 265
DPEWLDGSLPGDYG
Sbjct: 68 DPEWLDGSLPGDYG 81
>ref|XP_006351799.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
chloroplastic-like [Solanum tuberosum]
Length = 256
Score = 75.9 bits (185), Expect = 5e-12
Identities = 40/73 (54%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +2
Query: 56 VLQGLSTPFLSG---SRTLLNATXXXXXXXXXXXXXXXXXXXXPKKSWLPGVKAGGNLVD 226
VL GLS+ FL+G S+ LL A PKKSWLPGV+ GGNLVD
Sbjct: 8 VLNGLSSSFLTGGKKSQALLAAPLAARVGGAATPKRFIVVAAAPKKSWLPGVRGGGNLVD 67
Query: 227 PEWLDGSLPGDYG 265
PEWLDGSLPGDYG
Sbjct: 68 PEWLDGSLPGDYG 80
>ref|XP_004140973.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
chloroplastic-like [Cucumis sativus]
gi|449497079|ref|XP_004160305.1| PREDICTED: chlorophyll
a-b binding protein CP24 10A, chloroplastic-like
[Cucumis sativus]
Length = 255
Score = 75.5 bits (184), Expect = 7e-12
Identities = 42/73 (57%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +2
Query: 56 VLQGLSTPFLSGS---RTLLNATXXXXXXXXXXXXXXXXXXXXPKKSWLPGVKAGGNLVD 226
VL GL +PFL GS RTLL A PKKSWLPGV+ GGNLVD
Sbjct: 8 VLTGLGSPFLRGSSRTRTLL-AGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVD 66
Query: 227 PEWLDGSLPGDYG 265
PEWLDGSLPGDYG
Sbjct: 67 PEWLDGSLPGDYG 79
>gb|AGV54678.1| chlorophyll A/B binding protein CP24 10A chloroplastic [Phaseolus
vulgaris] gi|561021646|gb|ESW20417.1| hypothetical
protein PHAVU_006G207300g [Phaseolus vulgaris]
Length = 258
Score = 73.6 bits (179), Expect = 3e-11
Identities = 41/74 (55%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Frame = +2
Query: 56 VLQGLSTPFLSG---SRTLL-NATXXXXXXXXXXXXXXXXXXXXPKKSWLPGVKAGGNLV 223
VL GL + FLSG S+TLL A PKKSWLPGV+AGGNLV
Sbjct: 9 VLNGLGSSFLSGGSRSQTLLATAIGGKLGVAVSPRRLIVVAAAAPKKSWLPGVRAGGNLV 68
Query: 224 DPEWLDGSLPGDYG 265
DPEWLDGSLPGD+G
Sbjct: 69 DPEWLDGSLPGDFG 82
>ref|XP_006351797.1| PREDICTED: chlorophyll a-b binding protein CP24 10B,
chloroplastic-like [Solanum tuberosum]
Length = 256
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/72 (51%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +2
Query: 56 VLQGLSTPFLSGSRTL--LNATXXXXXXXXXXXXXXXXXXXXPKKSWLPGVKAGGNLVDP 229
VL GLS+ FL+G + L PKKSW+PGVKAGGNLVDP
Sbjct: 9 VLNGLSSSFLTGGKKTQALLGAPVTARVATPKRFIVAAAAVAPKKSWIPGVKAGGNLVDP 68
Query: 230 EWLDGSLPGDYG 265
EWLDGSLPGD+G
Sbjct: 69 EWLDGSLPGDFG 80
>dbj|BAI52949.1| light-harvesting complex II protein [Citrullus lanatus subsp.
vulgaris]
Length = 255
Score = 71.6 bits (174), Expect = 1e-10
Identities = 39/72 (54%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +2
Query: 56 VLQGLSTPFL-SGSRT-LLNATXXXXXXXXXXXXXXXXXXXXPKKSWLPGVKAGGNLVDP 229
VL GL +PFL GSRT L A PKKSW+P VK GGNL+DP
Sbjct: 8 VLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDP 67
Query: 230 EWLDGSLPGDYG 265
EWLDGSLPGDYG
Sbjct: 68 EWLDGSLPGDYG 79
>ref|XP_003531552.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
[Glycine max]
Length = 261
Score = 70.9 bits (172), Expect = 2e-10
Identities = 40/77 (51%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Frame = +2
Query: 56 VLQGLSTPFLSG---SRTLL----NATXXXXXXXXXXXXXXXXXXXXPKKSWLPGVKAGG 214
VL GL + FLSG S+TLL PKKSWLPGV+ GG
Sbjct: 9 VLNGLGSSFLSGGNRSQTLLATAIGGKVGAAAVTVSPRRLIVVAAAAPKKSWLPGVRGGG 68
Query: 215 NLVDPEWLDGSLPGDYG 265
NLVDPEWLDGSLPGDYG
Sbjct: 69 NLVDPEWLDGSLPGDYG 85
>ref|NP_001236415.1| uncharacterized protein LOC100527463 [Glycine max]
gi|255632410|gb|ACU16555.1| unknown [Glycine max]
Length = 259
Score = 70.9 bits (172), Expect = 2e-10
Identities = 40/76 (52%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Frame = +2
Query: 56 VLQGLSTPFLSG---SRTLLNATXXXXXXXXXXXXXXXXXXXX---PKKSWLPGVKAGGN 217
VL GL + FLSG S+TLL PKKSWLPGV+ GGN
Sbjct: 9 VLNGLGSSFLSGGNRSQTLLATAIGGKVGAAVTVNPRRLIVVAAAAPKKSWLPGVRGGGN 68
Query: 218 LVDPEWLDGSLPGDYG 265
LVDPEWLDGSLPGDYG
Sbjct: 69 LVDPEWLDGSLPGDYG 84
>gb|ACU15016.1| unknown [Glycine max]
Length = 247
Score = 70.9 bits (172), Expect = 2e-10
Identities = 40/77 (51%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Frame = +2
Query: 56 VLQGLSTPFLSG---SRTLL----NATXXXXXXXXXXXXXXXXXXXXPKKSWLPGVKAGG 214
VL GL + FLSG S+TLL PKKSWLPGV+ GG
Sbjct: 9 VLNGLGSSFLSGGNRSQTLLATAIGGKVGAAAVTVSPRRLIVVAAAAPKKSWLPGVRGGG 68
Query: 215 NLVDPEWLDGSLPGDYG 265
NLVDPEWLDGSLPGDYG
Sbjct: 69 NLVDPEWLDGSLPGDYG 85
>gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 precursor [Vigna radiata]
Length = 258
Score = 70.1 bits (170), Expect = 3e-10
Identities = 38/74 (51%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Frame = +2
Query: 56 VLQGLSTPFLSG---SRTLL-NATXXXXXXXXXXXXXXXXXXXXPKKSWLPGVKAGGNLV 223
VL GL + FLSG S+TLL + PKKSW+PGV+ GGNLV
Sbjct: 9 VLNGLGSSFLSGGSRSQTLLATSIGGKVGVAVSPRRLIVVAAAAPKKSWIPGVRGGGNLV 68
Query: 224 DPEWLDGSLPGDYG 265
DPEWLDGSLPGD+G
Sbjct: 69 DPEWLDGSLPGDFG 82
>ref|XP_004230588.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
chloroplastic-like [Solanum lycopersicum]
gi|115833|sp|P27524.1|CB4A_SOLLC RecName:
Full=Chlorophyll a-b binding protein CP24 10A,
chloroplastic; Short=CAB-10A; Short=LHCP; Flags:
Precursor gi|170394|gb|AAA34143.1| a-binding protein
[Solanum lycopersicum]
Length = 256
Score = 69.7 bits (169), Expect = 4e-10
Identities = 37/73 (50%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Frame = +2
Query: 56 VLQGLSTPFLSG---SRTLLNATXXXXXXXXXXXXXXXXXXXXPKKSWLPGVKAGGNLVD 226
VL GLS+ FL+G S+ LL A KKSW+P V+ GGNLVD
Sbjct: 8 VLNGLSSSFLTGGNKSQALLAAPLAARVGGAATPKRFTVLAAAAKKSWIPAVRGGGNLVD 67
Query: 227 PEWLDGSLPGDYG 265
PEWLDGSLPGDYG
Sbjct: 68 PEWLDGSLPGDYG 80
>gb|EPS71396.1| hypothetical protein M569_03363 [Genlisea aurea]
Length = 256
Score = 69.7 bits (169), Expect = 4e-10
Identities = 35/73 (47%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +2
Query: 56 VLQGLSTPFLSGSR---TLLNATXXXXXXXXXXXXXXXXXXXXPKKSWLPGVKAGGNLVD 226
++ GL + FL+G+R L ++ PK+SWLPGVK+GGNLVD
Sbjct: 8 LVNGLGSTFLTGARKSHAALLSSPATLRSAGGKRAVVISAAAFPKQSWLPGVKSGGNLVD 67
Query: 227 PEWLDGSLPGDYG 265
PEWLDGSLPGDYG
Sbjct: 68 PEWLDGSLPGDYG 80
>ref|XP_003593177.1| Chloroplast chlorophyll a/b-binding protein CP24 [Medicago
truncatula] gi|355482225|gb|AES63428.1| Chloroplast
chlorophyll a/b-binding protein CP24 [Medicago
truncatula]
Length = 261
Score = 69.3 bits (168), Expect = 5e-10
Identities = 39/77 (50%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Frame = +2
Query: 56 VLQGLSTPFLSG---SRTLLNATXXXXXXXXXXXXXXXXXXXX----PKKSWLPGVKAGG 214
VL GL + FLSG S+TLL T PKKSW+PGV+ GG
Sbjct: 9 VLNGLGSSFLSGGKRSQTLLATTAIGAKVGVAAGSPKRLIVAAAASAPKKSWIPGVRFGG 68
Query: 215 NLVDPEWLDGSLPGDYG 265
NLVDPEWLDGSLPGD+G
Sbjct: 69 NLVDPEWLDGSLPGDFG 85
>gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotiana tabacum]
Length = 257
Score = 69.3 bits (168), Expect = 5e-10
Identities = 38/74 (51%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Frame = +2
Query: 56 VLQGLSTPFLSG---SRTLLNA-TXXXXXXXXXXXXXXXXXXXXPKKSWLPGVKAGGNLV 223
VL GLS+ FL+G S+ LL A PKKSW+P VK GGNL+
Sbjct: 8 VLNGLSSSFLTGGKNSQALLGAPVAARIGGLATPKRCIVAAAAAPKKSWIPAVKGGGNLL 67
Query: 224 DPEWLDGSLPGDYG 265
DPEWLDGSLPGDYG
Sbjct: 68 DPEWLDGSLPGDYG 81
>gb|EMJ24688.1| hypothetical protein PRUPE_ppa010195mg [Prunus persica]
Length = 259
Score = 68.2 bits (165), Expect = 1e-09
Identities = 37/76 (48%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Frame = +2
Query: 56 VLQGLSTPFLSG---SRTLLNA---TXXXXXXXXXXXXXXXXXXXXPKKSWLPGVKAGGN 217
VL GL++PFL G S+ LL+A T PKKSW+P VKA N
Sbjct: 8 VLNGLNSPFLCGGKRSQALLSAGFGTTRVGGGPAAPKRFIVVAAAAPKKSWIPAVKASNN 67
Query: 218 LVDPEWLDGSLPGDYG 265
+DPEWLDGSLPGDYG
Sbjct: 68 FIDPEWLDGSLPGDYG 83
>ref|XP_004230586.1| PREDICTED: chlorophyll a-b binding protein CP24 10B,
chloroplastic-like isoform 1 [Solanum lycopersicum]
gi|460369474|ref|XP_004230587.1| PREDICTED: chlorophyll
a-b binding protein CP24 10B, chloroplastic-like isoform
2 [Solanum lycopersicum]
gi|115834|sp|P27525.1|CB4B_SOLLC RecName:
Full=Chlorophyll a-b binding protein CP24 10B,
chloroplastic; Short=CAB-10B; Short=LHCP; Flags:
Precursor gi|170400|gb|AAA34146.1| chlorophyll b-binding
protein [Solanum lycopersicum]
Length = 256
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/72 (48%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 56 VLQGLSTPFLSGSRTL--LNATXXXXXXXXXXXXXXXXXXXXPKKSWLPGVKAGGNLVDP 229
VL GLS+ FL+G + L PKKSW+P VK+GGNLVDP
Sbjct: 9 VLNGLSSSFLTGGKKTQALLGAHVTARVTTPKRFVVAAAAVAPKKSWIPAVKSGGNLVDP 68
Query: 230 EWLDGSLPGDYG 265
EWLDGSLPGD+G
Sbjct: 69 EWLDGSLPGDFG 80
>gb|EOX98842.1| Light harvesting complex photosystem II subunit 6 [Theobroma cacao]
Length = 254
Score = 67.8 bits (164), Expect = 1e-09
Identities = 35/73 (47%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Frame = +2
Query: 56 VLQGLSTPFLSG---SRTLLNATXXXXXXXXXXXXXXXXXXXXPKKSWLPGVKAGGNLVD 226
V+ GL +PFL G S+ LL A PKKSW+PGV+ GGN ++
Sbjct: 8 VINGLGSPFLCGGKRSQALLGARVATPASGTRKLVVVAAAA--PKKSWIPGVRGGGNFIN 65
Query: 227 PEWLDGSLPGDYG 265
PEWLDGSLPGDYG
Sbjct: 66 PEWLDGSLPGDYG 78
>ref|XP_004485563.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
chloroplastic-like [Cicer arietinum]
Length = 260
Score = 67.8 bits (164), Expect = 1e-09
Identities = 37/76 (48%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Frame = +2
Query: 56 VLQGLSTPFLSG---SRTLLNATXXXXXXXXXXXXXXXXXXXX---PKKSWLPGVKAGGN 217
VL GL + FL G S+TLL AT PKKSW+PGV+ GGN
Sbjct: 9 VLNGLGSSFLCGGKRSQTLLLATAIGGKVGAAAVSPRRLVVAAAAAPKKSWIPGVRGGGN 68
Query: 218 LVDPEWLDGSLPGDYG 265
+DPEWLDGSLPGD+G
Sbjct: 69 FIDPEWLDGSLPGDFG 84