BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00003708
         (345 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPB89856.1| 50S ribosomal protein L6e [Mucor circinelloides f...    53   2e-08
gb|EIE86660.1| hypothetical protein RO3G_11371 [Rhizopus delemar...    49   6e-08
gb|EIE76789.1| hypothetical protein RO3G_01493 [Rhizopus delemar...    48   1e-07
gb|EPB89554.1| 50S ribosomal protein L6e [Mucor circinelloides f...    48   3e-07
sp|P34091.1|RL6_MESCR RecName: Full=60S ribosomal protein L6; Al...    55   7e-06
gb|ELW48350.1| 60S ribosomal protein L6, partial [Tupaia chinensis]    39   7e-06
emb|CBI24846.3| unnamed protein product [Vitis vinifera]               55   1e-05
ref|XP_002265394.1| PREDICTED: 60S ribosomal protein L6 [Vitis v...    55   1e-05

>gb|EPB89856.1| 50S ribosomal protein L6e [Mucor circinelloides f. circinelloides
           1006PhL]
          Length = 234

 Score = 53.1 bits (126), Expect(2) = 2e-08
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = -1

Query: 345 NGVPLRRVNQAYVIATSTKVDISGVNV 265
           NGVPLRRVNQAYVIATSTKVDISGV V
Sbjct: 133 NGVPLRRVNQAYVIATSTKVDISGVKV 159



 Score = 31.2 bits (69), Expect(2) = 2e-08
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -2

Query: 149 AVDTPLIKAIEAVEYLRGYLGTKFTLRSGTKPHELQ 42
           AVD  L++ +    +LR YL + F L  G  PH ++
Sbjct: 198 AVDKALLEVVAKTPFLRQYLASSFGLNKGQFPHNMK 233


>gb|EIE86660.1| hypothetical protein RO3G_11371 [Rhizopus delemar RA 99-880]
          Length = 234

 Score = 48.9 bits (115), Expect(2) = 6e-08
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = -1

Query: 345 NGVPLRRVNQAYVIATSTKVDISGVNV 265
           NGVPLRRVNQAYVIATSTK+D+S V V
Sbjct: 133 NGVPLRRVNQAYVIATSTKLDLSNVKV 159



 Score = 33.5 bits (75), Expect(2) = 6e-08
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -2

Query: 149 AVDTPLIKAIEAVEYLRGYLGTKFTLRSGTKPHELQ 42
           A+D  L++ +    +LR YL + F LR G  PH+L+
Sbjct: 198 AIDKALLEVVVKTPFLRQYLSSTFGLRKGQFPHDLK 233


>gb|EIE76789.1| hypothetical protein RO3G_01493 [Rhizopus delemar RA 99-880]
          Length = 234

 Score = 47.8 bits (112), Expect(2) = 1e-07
 Identities = 22/27 (81%), Positives = 25/27 (92%)
 Frame = -1

Query: 345 NGVPLRRVNQAYVIATSTKVDISGVNV 265
           NGVPLRRVNQAYVIATSTK+D++ V V
Sbjct: 133 NGVPLRRVNQAYVIATSTKLDLASVKV 159



 Score = 33.5 bits (75), Expect(2) = 1e-07
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -2

Query: 149 AVDTPLIKAIEAVEYLRGYLGTKFTLRSGTKPHELQ 42
           A+D  L++ +    +LR YL + F LR G  PH+L+
Sbjct: 198 AIDKALLEVVVKTPFLRQYLSSTFGLRKGQFPHDLK 233


>gb|EPB89554.1| 50S ribosomal protein L6e [Mucor circinelloides f. circinelloides
           1006PhL]
          Length = 234

 Score = 47.8 bits (112), Expect(2) = 3e-07
 Identities = 21/27 (77%), Positives = 26/27 (96%)
 Frame = -1

Query: 345 NGVPLRRVNQAYVIATSTKVDISGVNV 265
           NGVPLRRVNQAYVIATSTK+D++ V++
Sbjct: 133 NGVPLRRVNQAYVIATSTKLDLASVSI 159



 Score = 32.0 bits (71), Expect(2) = 3e-07
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -2

Query: 149 AVDTPLIKAIEAVEYLRGYLGTKFTLRSGTKPHELQ 42
           AVD  L++ +    +LR YL + F L  G  PH+++
Sbjct: 198 AVDKALLEVVAKTPFLRQYLSSNFGLNKGQFPHDMK 233


>sp|P34091.1|RL6_MESCR RecName: Full=60S ribosomal protein L6; AltName: Full=YL16-like
           gi|19539|emb|CAA49175.1| ribosomal protein YL16
           [Mesembryanthemum crystallinum]
          Length = 234

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = -1

Query: 345 NGVPLRRVNQAYVIATSTKVDISGVNV 265
           NGVPLRRVNQAYVIATSTKVDISGVNV
Sbjct: 128 NGVPLRRVNQAYVIATSTKVDISGVNV 154


>gb|ELW48350.1| 60S ribosomal protein L6, partial [Tupaia chinensis]
          Length = 878

 Score = 39.3 bits (90), Expect(2) = 7e-06
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = -1

Query: 345 NGVPLRRVNQAYVIATSTKVDISGVNV 265
           N VPLRR +Q +VIATSTK+DIS V +
Sbjct: 318 NRVPLRRTHQKFVIATSTKIDISKVKI 344



 Score = 35.8 bits (81), Expect(2) = 7e-06
 Identities = 16/35 (45%), Positives = 24/35 (68%)
 Frame = -2

Query: 149 AVDTPLIKAIEAVEYLRGYLGTKFTLRSGTKPHEL 45
           AVD+ ++  I+AV  L+GYL + F L +G  PH+L
Sbjct: 383 AVDSQILPKIKAVPQLQGYLQSMFALTNGVYPHKL 417


>emb|CBI24846.3| unnamed protein product [Vitis vinifera]
          Length = 206

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = -1

Query: 345 NGVPLRRVNQAYVIATSTKVDISGVNV 265
           NGVPLRRVNQAY+IATSTKVDISGVNV
Sbjct: 100 NGVPLRRVNQAYIIATSTKVDISGVNV 126


>ref|XP_002265394.1| PREDICTED: 60S ribosomal protein L6 [Vitis vinifera]
          Length = 233

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = -1

Query: 345 NGVPLRRVNQAYVIATSTKVDISGVNV 265
           NGVPLRRVNQAY+IATSTKVDISGVNV
Sbjct: 127 NGVPLRRVNQAYIIATSTKVDISGVNV 153