BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00003662
         (660 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chlor...   363   2e-98
ref|XP_002867828.1| pseudouridine synthase family protein [Arabi...   362   4e-98
ref|NP_193908.1| RNA pseudourine synthase 6 [Arabidopsis thalian...   362   7e-98
gb|EOY28643.1| Pseudouridine synthase family protein [Theobroma ...   360   2e-97
ref|XP_006284907.1| hypothetical protein CARUB_v10006203mg [Caps...   360   2e-97
ref|XP_006348096.1| PREDICTED: RNA pseudouridine synthase 6, chl...   358   6e-97
ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chl...   358   6e-97
ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chlor...   358   8e-97
ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chl...   357   1e-96
ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chlor...   357   2e-96
ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citr...   356   3e-96
ref|XP_006449063.1| hypothetical protein CICLE_v10015055mg [Citr...   356   3e-96
ref|XP_006858058.1| hypothetical protein AMTR_s00062p00043970 [A...   356   3e-96
ref|XP_006413737.1| hypothetical protein EUTSA_v10025093mg [Eutr...   353   2e-95
gb|EMJ14726.1| hypothetical protein PRUPE_ppa020640mg [Prunus pe...   352   4e-95
ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chlor...   351   1e-94
ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [...   351   1e-94
ref|XP_006594433.1| PREDICTED: RNA pseudouridine synthase 6, chl...   350   2e-94
ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chl...   350   2e-94
ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   350   3e-94

>ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic [Vitis
           vinifera] gi|302144082|emb|CBI23187.3| unnamed protein
           product [Vitis vinifera]
          Length = 472

 Score =  363 bits (933), Expect = 2e-98
 Identities = 167/219 (76%), Positives = 194/219 (88%)
 Frame = -3

Query: 658 TPEQFQIYKEVTEPSVLKKRSSIKGKTVREAQKTFRVTDANQFVEAGTYLRVHVHPKRFP 479
           TPEQ +++KEVT PSVL+KR SIKGKT+REAQKTFR+TD N+FVEAGTYLRVHVHPKRFP
Sbjct: 144 TPEQVRLFKEVTAPSVLRKRPSIKGKTIREAQKTFRITDVNEFVEAGTYLRVHVHPKRFP 203

Query: 478 RCYEIDWNSRIIAVTDTFVILDKPAATSVGGTADNIEECCATFASRALGFDAPLRTTHQI 299
           RCYEIDW SRIIAVT+++V+LDKPA TSVGGT DNIEE CATFA+RALG   PLRTTHQI
Sbjct: 204 RCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLTTPLRTTHQI 263

Query: 298 DNCTEGCVVFARTKDFCSEFHSMIREKQVRKLYRALAAAPVPIGIITHYMRPTNVAPRLV 119
           DNCTEGCVV ARTK++CS FH  IREK+V+KLYRALAAAP+PIGI+THYMRP N+APRL+
Sbjct: 264 DNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYRALAAAPMPIGIVTHYMRPVNIAPRLI 323

Query: 118 SEDPIGGWHLCQLEVLECKDVAWPAHEVFKNHKVEDCGW 2
           SED I GW+LCQLEVLECK+V WP+  + + + +ED GW
Sbjct: 324 SEDFIKGWYLCQLEVLECKEVPWPSTLIEEKYCIEDRGW 362


>ref|XP_002867828.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297313664|gb|EFH44087.1| pseudouridine
           synthase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 476

 Score =  362 bits (930), Expect = 4e-98
 Identities = 169/219 (77%), Positives = 189/219 (86%)
 Frame = -3

Query: 658 TPEQFQIYKEVTEPSVLKKRSSIKGKTVREAQKTFRVTDANQFVEAGTYLRVHVHPKRFP 479
           TPEQ ++++EVT PSVLKKRSSIKGKTVREAQKTFRVT  NQ+ EAGTYLRVHVHPKR P
Sbjct: 145 TPEQIELFEEVTCPSVLKKRSSIKGKTVREAQKTFRVTHTNQYAEAGTYLRVHVHPKRSP 204

Query: 478 RCYEIDWNSRIIAVTDTFVILDKPAATSVGGTADNIEECCATFASRALGFDAPLRTTHQI 299
           RCYEIDW SRI+AVTD++VILDKPA T+VGGT DNIEE CATFASRAL    PL+TTHQI
Sbjct: 205 RCYEIDWKSRIVAVTDSYVILDKPAGTTVGGTTDNIEESCATFASRALDLPEPLKTTHQI 264

Query: 298 DNCTEGCVVFARTKDFCSEFHSMIREKQVRKLYRALAAAPVPIGIITHYMRPTNVAPRLV 119
           DNCTEGCVVFARTK++CS FH+ IR K+V+KLYRALAAAP+P GII+HYMRP N+APRLV
Sbjct: 265 DNCTEGCVVFARTKEYCSVFHTKIRNKEVKKLYRALAAAPLPTGIISHYMRPKNMAPRLV 324

Query: 118 SEDPIGGWHLCQLEVLECKDVAWPAHEVFKNHKVEDCGW 2
           SED I GWHLCQLEVLECK + WP     K H +EDCGW
Sbjct: 325 SEDSIKGWHLCQLEVLECKKIPWPDAATEKKHDIEDCGW 363


>ref|NP_193908.1| RNA pseudourine synthase 6 [Arabidopsis thaliana]
           gi|75212600|sp|Q9SVS0.1|PUS6_ARATH RecName: Full=RNA
           pseudouridine synthase 6, chloroplastic; AltName:
           Full=RNA pseudouridylate synthase 6; AltName:
           Full=RNA-uridine isomerase 6; Flags: Precursor
           gi|4455285|emb|CAB36821.1| hypothetical protein
           [Arabidopsis thaliana] gi|7268974|emb|CAB81284.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|23296381|gb|AAN13057.1| unknown protein [Arabidopsis
           thaliana] gi|110741616|dbj|BAE98756.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332659101|gb|AEE84501.1| RNA pseudourine synthase 6
           [Arabidopsis thaliana]
          Length = 472

 Score =  362 bits (928), Expect = 7e-98
 Identities = 168/219 (76%), Positives = 189/219 (86%)
 Frame = -3

Query: 658 TPEQFQIYKEVTEPSVLKKRSSIKGKTVREAQKTFRVTDANQFVEAGTYLRVHVHPKRFP 479
           TPE+  +++EVT PSVLKKRSSIKGKTVREAQKTFRVT  NQ+ EAGTYLRVHVHPKR P
Sbjct: 141 TPEEIILFEEVTSPSVLKKRSSIKGKTVREAQKTFRVTHTNQYAEAGTYLRVHVHPKRSP 200

Query: 478 RCYEIDWNSRIIAVTDTFVILDKPAATSVGGTADNIEECCATFASRALGFDAPLRTTHQI 299
           RCYEIDW SRI+AVTD++VILDKPA T+VGGT DNIEE CATFASRAL    PL+TTHQI
Sbjct: 201 RCYEIDWKSRIVAVTDSYVILDKPAGTTVGGTTDNIEESCATFASRALDLPEPLKTTHQI 260

Query: 298 DNCTEGCVVFARTKDFCSEFHSMIREKQVRKLYRALAAAPVPIGIITHYMRPTNVAPRLV 119
           DNCTEGCVVFARTK++CS FH+ IR K+V+KLYRALAAAP+PIGII+HYMRP N+APRLV
Sbjct: 261 DNCTEGCVVFARTKEYCSVFHTKIRNKEVKKLYRALAAAPLPIGIISHYMRPKNMAPRLV 320

Query: 118 SEDPIGGWHLCQLEVLECKDVAWPAHEVFKNHKVEDCGW 2
           +ED I GWHLCQLEVLECK + WP     K H +EDCGW
Sbjct: 321 AEDSIQGWHLCQLEVLECKKIPWPDAATEKKHDIEDCGW 359


>gb|EOY28643.1| Pseudouridine synthase family protein [Theobroma cacao]
          Length = 491

 Score =  360 bits (925), Expect = 2e-97
 Identities = 167/219 (76%), Positives = 192/219 (87%)
 Frame = -3

Query: 658 TPEQFQIYKEVTEPSVLKKRSSIKGKTVREAQKTFRVTDANQFVEAGTYLRVHVHPKRFP 479
           TPEQ +I+KEVT PSVL KR+SI+GKTVREAQKTFR+T  +QFVEAGTYLRVHVHPKRFP
Sbjct: 160 TPEQIRIFKEVTAPSVLSKRTSIRGKTVREAQKTFRITHVDQFVEAGTYLRVHVHPKRFP 219

Query: 478 RCYEIDWNSRIIAVTDTFVILDKPAATSVGGTADNIEECCATFASRALGFDAPLRTTHQI 299
           RCYEIDW SRIIAVTD++V+LDKPA TSVGGT DNIEE CATFA+RALGF  PL+TTHQI
Sbjct: 220 RCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTDNIEESCATFANRALGFSTPLKTTHQI 279

Query: 298 DNCTEGCVVFARTKDFCSEFHSMIREKQVRKLYRALAAAPVPIGIITHYMRPTNVAPRLV 119
           DNCTEGCVV ARTK++CS FH  IREK+V+KLY AL AAP+PIG+ITHYMRP N+APRLV
Sbjct: 280 DNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALTAAPLPIGVITHYMRPINMAPRLV 339

Query: 118 SEDPIGGWHLCQLEVLECKDVAWPAHEVFKNHKVEDCGW 2
           SED I GW+LCQLEV+ECK V WP + + +N+ +ED GW
Sbjct: 340 SEDFIKGWYLCQLEVMECKKVPWPDYVIQENYCIEDSGW 378


>ref|XP_006284907.1| hypothetical protein CARUB_v10006203mg [Capsella rubella]
           gi|482553612|gb|EOA17805.1| hypothetical protein
           CARUB_v10006203mg [Capsella rubella]
          Length = 479

 Score =  360 bits (925), Expect = 2e-97
 Identities = 168/219 (76%), Positives = 189/219 (86%)
 Frame = -3

Query: 658 TPEQFQIYKEVTEPSVLKKRSSIKGKTVREAQKTFRVTDANQFVEAGTYLRVHVHPKRFP 479
           TPE+ ++++EVT PSVLKKRSSIKGKTVREAQKTFRVT  +Q+ EAGTYLRVHVHPKR P
Sbjct: 148 TPEEIKLFEEVTSPSVLKKRSSIKGKTVREAQKTFRVTHTDQYAEAGTYLRVHVHPKRSP 207

Query: 478 RCYEIDWNSRIIAVTDTFVILDKPAATSVGGTADNIEECCATFASRALGFDAPLRTTHQI 299
           RCYEIDW SRIIAVTD++VILDKPA T+VGGT DNIEE CATFASRAL    PL+TTHQI
Sbjct: 208 RCYEIDWKSRIIAVTDSYVILDKPAGTTVGGTTDNIEESCATFASRALDLPEPLKTTHQI 267

Query: 298 DNCTEGCVVFARTKDFCSEFHSMIREKQVRKLYRALAAAPVPIGIITHYMRPTNVAPRLV 119
           DNCTEGCVVFARTK++CS FH  IR+K+V+KLYRALAAAP+P GII+HYMRP N+APRLV
Sbjct: 268 DNCTEGCVVFARTKEYCSVFHMKIRDKEVKKLYRALAAAPLPTGIISHYMRPKNMAPRLV 327

Query: 118 SEDPIGGWHLCQLEVLECKDVAWPAHEVFKNHKVEDCGW 2
           SED I GWHLCQLEVLECK + WP     K H +EDCGW
Sbjct: 328 SEDSIKGWHLCQLEVLECKKIPWPNAGTEKKHDIEDCGW 366


>ref|XP_006348096.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X3 [Solanum tuberosum]
          Length = 440

 Score =  358 bits (920), Expect = 6e-97
 Identities = 164/219 (74%), Positives = 194/219 (88%)
 Frame = -3

Query: 658 TPEQFQIYKEVTEPSVLKKRSSIKGKTVREAQKTFRVTDANQFVEAGTYLRVHVHPKRFP 479
           +PEQ ++Y+EVT+PS+L++R+SIKGKTVREAQKTF++T A++ VEAGTYLRVHVHPKRFP
Sbjct: 112 SPEQIKVYEEVTDPSILRQRTSIKGKTVREAQKTFKITRADEIVEAGTYLRVHVHPKRFP 171

Query: 478 RCYEIDWNSRIIAVTDTFVILDKPAATSVGGTADNIEECCATFASRALGFDAPLRTTHQI 299
           RCY+IDW SRIIAVTD +V+LDKPA TSVGGT DNIEE CATFA+RALGF APL TTHQI
Sbjct: 172 RCYDIDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFATRALGFSAPLLTTHQI 231

Query: 298 DNCTEGCVVFARTKDFCSEFHSMIREKQVRKLYRALAAAPVPIGIITHYMRPTNVAPRLV 119
           DNCTEGCVV AR+K++CS FH  IREK+V+KLY ALAAAPVPIGI+THYMRP N+APRLV
Sbjct: 232 DNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYLALAAAPVPIGILTHYMRPINMAPRLV 291

Query: 118 SEDPIGGWHLCQLEVLECKDVAWPAHEVFKNHKVEDCGW 2
           SED + GW LCQLEVLECK V WP+ E+ + + +EDCGW
Sbjct: 292 SEDFVKGWLLCQLEVLECKKVPWPSSEIQRTYNLEDCGW 330


>ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X1 [Solanum tuberosum] gi|565362724|ref|XP_006348095.1|
           PREDICTED: RNA pseudouridine synthase 6,
           chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 483

 Score =  358 bits (920), Expect = 6e-97
 Identities = 164/219 (74%), Positives = 194/219 (88%)
 Frame = -3

Query: 658 TPEQFQIYKEVTEPSVLKKRSSIKGKTVREAQKTFRVTDANQFVEAGTYLRVHVHPKRFP 479
           +PEQ ++Y+EVT+PS+L++R+SIKGKTVREAQKTF++T A++ VEAGTYLRVHVHPKRFP
Sbjct: 155 SPEQIKVYEEVTDPSILRQRTSIKGKTVREAQKTFKITRADEIVEAGTYLRVHVHPKRFP 214

Query: 478 RCYEIDWNSRIIAVTDTFVILDKPAATSVGGTADNIEECCATFASRALGFDAPLRTTHQI 299
           RCY+IDW SRIIAVTD +V+LDKPA TSVGGT DNIEE CATFA+RALGF APL TTHQI
Sbjct: 215 RCYDIDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFATRALGFSAPLLTTHQI 274

Query: 298 DNCTEGCVVFARTKDFCSEFHSMIREKQVRKLYRALAAAPVPIGIITHYMRPTNVAPRLV 119
           DNCTEGCVV AR+K++CS FH  IREK+V+KLY ALAAAPVPIGI+THYMRP N+APRLV
Sbjct: 275 DNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYLALAAAPVPIGILTHYMRPINMAPRLV 334

Query: 118 SEDPIGGWHLCQLEVLECKDVAWPAHEVFKNHKVEDCGW 2
           SED + GW LCQLEVLECK V WP+ E+ + + +EDCGW
Sbjct: 335 SEDFVKGWLLCQLEVLECKKVPWPSSEIQRTYNLEDCGW 373


>ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Solanum
           lycopersicum]
          Length = 448

 Score =  358 bits (919), Expect = 8e-97
 Identities = 165/219 (75%), Positives = 193/219 (88%)
 Frame = -3

Query: 658 TPEQFQIYKEVTEPSVLKKRSSIKGKTVREAQKTFRVTDANQFVEAGTYLRVHVHPKRFP 479
           +PEQ ++Y+EVT+PSVL+KR+SIKGKTVREAQKTF++T A++ VEAGTYLRVHVHPKRFP
Sbjct: 120 SPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFKITRADEIVEAGTYLRVHVHPKRFP 179

Query: 478 RCYEIDWNSRIIAVTDTFVILDKPAATSVGGTADNIEECCATFASRALGFDAPLRTTHQI 299
           RCY+IDW SRIIAVTD +V+LDKPA TSVGGT DNIEE CATFA+RALGF APL TTHQI
Sbjct: 180 RCYDIDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFATRALGFSAPLLTTHQI 239

Query: 298 DNCTEGCVVFARTKDFCSEFHSMIREKQVRKLYRALAAAPVPIGIITHYMRPTNVAPRLV 119
           DNCTEGCVV AR+K++CS FH  IREK+VRKLY ALAAAPVPIGI+THYMRP N+APRLV
Sbjct: 240 DNCTEGCVVLARSKEYCSVFHGKIREKKVRKLYLALAAAPVPIGILTHYMRPINMAPRLV 299

Query: 118 SEDPIGGWHLCQLEVLECKDVAWPAHEVFKNHKVEDCGW 2
           S D + GW LCQLEVLEC+ V WP+ E+ + + +EDCGW
Sbjct: 300 SRDFVKGWLLCQLEVLECQKVPWPSSEIQRTYNLEDCGW 338


>ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X1 [Citrus sinensis] gi|568827302|ref|XP_006468003.1|
           PREDICTED: RNA pseudouridine synthase 6,
           chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 487

 Score =  357 bits (917), Expect = 1e-96
 Identities = 166/219 (75%), Positives = 189/219 (86%)
 Frame = -3

Query: 658 TPEQFQIYKEVTEPSVLKKRSSIKGKTVREAQKTFRVTDANQFVEAGTYLRVHVHPKRFP 479
           TPEQ +++KEVT+PSVL KRSSIKGKTVREAQKTFR+T  +Q VEAGTYLRVHVHPKRFP
Sbjct: 150 TPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVDQIVEAGTYLRVHVHPKRFP 209

Query: 478 RCYEIDWNSRIIAVTDTFVILDKPAATSVGGTADNIEECCATFASRALGFDAPLRTTHQI 299
           RCY+IDWNSRIIAVT++ V+LDKPA TSVGGT DNIEE CATFASRALG   PLRTTHQI
Sbjct: 210 RCYDIDWNSRIIAVTESHVVLDKPAGTSVGGTTDNIEESCATFASRALGLTTPLRTTHQI 269

Query: 298 DNCTEGCVVFARTKDFCSEFHSMIREKQVRKLYRALAAAPVPIGIITHYMRPTNVAPRLV 119
           DNCTEGCVV ART+++CS FH  IREK+V+KLY AL  AP+P+GI+THYMRP N+APRLV
Sbjct: 270 DNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLALTTAPLPVGIMTHYMRPINIAPRLV 329

Query: 118 SEDPIGGWHLCQLEVLECKDVAWPAHEVFKNHKVEDCGW 2
           SED I GW+LCQLEV+ECK V WP   V K + +EDCGW
Sbjct: 330 SEDFITGWYLCQLEVMECKKVPWPDATVGKAYSIEDCGW 368


>ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 477

 Score =  357 bits (915), Expect = 2e-96
 Identities = 166/219 (75%), Positives = 186/219 (84%)
 Frame = -3

Query: 658 TPEQFQIYKEVTEPSVLKKRSSIKGKTVREAQKTFRVTDANQFVEAGTYLRVHVHPKRFP 479
           TPEQ ++YKEVT PSVLKKR SIKGKTVREAQKTFR+T A+Q+VE GTYLRVHVHPKRFP
Sbjct: 147 TPEQMRVYKEVTAPSVLKKRDSIKGKTVREAQKTFRITHADQYVEDGTYLRVHVHPKRFP 206

Query: 478 RCYEIDWNSRIIAVTDTFVILDKPAATSVGGTADNIEECCATFASRALGFDAPLRTTHQI 299
           RCY+IDW SR+IAVT+ FV+LDKPA T+VGGT DNIEE CATF SRALG   PL TTHQI
Sbjct: 207 RCYDIDWKSRVIAVTEDFVVLDKPAGTTVGGTTDNIEESCATFTSRALGLSTPLMTTHQI 266

Query: 298 DNCTEGCVVFARTKDFCSEFHSMIREKQVRKLYRALAAAPVPIGIITHYMRPTNVAPRLV 119
           DNCTEGCVV ARTKD+CS FH  IREK+V+KLY ALAAAPVP+G ITHYMRP NVAPRL+
Sbjct: 267 DNCTEGCVVLARTKDYCSVFHGKIREKKVKKLYLALAAAPVPLGTITHYMRPINVAPRLI 326

Query: 118 SEDPIGGWHLCQLEVLECKDVAWPAHEVFKNHKVEDCGW 2
           SED I  W LCQLEV+ECK V WP+  + + + VEDCGW
Sbjct: 327 SEDSIERWSLCQLEVMECKKVPWPSSVIEEEYGVEDCGW 365


>ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
           gi|557551677|gb|ESR62306.1| hypothetical protein
           CICLE_v10015055mg [Citrus clementina]
          Length = 487

 Score =  356 bits (914), Expect = 3e-96
 Identities = 165/219 (75%), Positives = 189/219 (86%)
 Frame = -3

Query: 658 TPEQFQIYKEVTEPSVLKKRSSIKGKTVREAQKTFRVTDANQFVEAGTYLRVHVHPKRFP 479
           TPEQ +++KEVT+PSVL KRSSIKGKTVREAQKTFR+T  +Q VEAGTYLRVHVHPKRFP
Sbjct: 150 TPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVDQIVEAGTYLRVHVHPKRFP 209

Query: 478 RCYEIDWNSRIIAVTDTFVILDKPAATSVGGTADNIEECCATFASRALGFDAPLRTTHQI 299
           RCY+IDW SRIIAVT++ V+LDKPA TSVGGT DNIEE CATFASRALG   PLRTTHQI
Sbjct: 210 RCYDIDWKSRIIAVTESHVVLDKPAGTSVGGTTDNIEESCATFASRALGLTTPLRTTHQI 269

Query: 298 DNCTEGCVVFARTKDFCSEFHSMIREKQVRKLYRALAAAPVPIGIITHYMRPTNVAPRLV 119
           DNCTEGCVV ART+++CS FH  IREK+V+KLY AL AAP+P+GI+THYMRP N+APRL+
Sbjct: 270 DNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLALTAAPLPVGIMTHYMRPINIAPRLI 329

Query: 118 SEDPIGGWHLCQLEVLECKDVAWPAHEVFKNHKVEDCGW 2
           SED I GW+LCQLEV+ECK V WP   V K + +EDCGW
Sbjct: 330 SEDFIKGWYLCQLEVMECKKVPWPDATVGKAYSIEDCGW 368


>ref|XP_006449063.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
           gi|557551674|gb|ESR62303.1| hypothetical protein
           CICLE_v10015055mg [Citrus clementina]
          Length = 392

 Score =  356 bits (914), Expect = 3e-96
 Identities = 165/219 (75%), Positives = 189/219 (86%)
 Frame = -3

Query: 658 TPEQFQIYKEVTEPSVLKKRSSIKGKTVREAQKTFRVTDANQFVEAGTYLRVHVHPKRFP 479
           TPEQ +++KEVT+PSVL KRSSIKGKTVREAQKTFR+T  +Q VEAGTYLRVHVHPKRFP
Sbjct: 55  TPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVDQIVEAGTYLRVHVHPKRFP 114

Query: 478 RCYEIDWNSRIIAVTDTFVILDKPAATSVGGTADNIEECCATFASRALGFDAPLRTTHQI 299
           RCY+IDW SRIIAVT++ V+LDKPA TSVGGT DNIEE CATFASRALG   PLRTTHQI
Sbjct: 115 RCYDIDWKSRIIAVTESHVVLDKPAGTSVGGTTDNIEESCATFASRALGLTTPLRTTHQI 174

Query: 298 DNCTEGCVVFARTKDFCSEFHSMIREKQVRKLYRALAAAPVPIGIITHYMRPTNVAPRLV 119
           DNCTEGCVV ART+++CS FH  IREK+V+KLY AL AAP+P+GI+THYMRP N+APRL+
Sbjct: 175 DNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLALTAAPLPVGIMTHYMRPINIAPRLI 234

Query: 118 SEDPIGGWHLCQLEVLECKDVAWPAHEVFKNHKVEDCGW 2
           SED I GW+LCQLEV+ECK V WP   V K + +EDCGW
Sbjct: 235 SEDFIKGWYLCQLEVMECKKVPWPDATVGKAYSIEDCGW 273


>ref|XP_006858058.1| hypothetical protein AMTR_s00062p00043970 [Amborella trichopoda]
           gi|548862161|gb|ERN19525.1| hypothetical protein
           AMTR_s00062p00043970 [Amborella trichopoda]
          Length = 477

 Score =  356 bits (914), Expect = 3e-96
 Identities = 163/219 (74%), Positives = 190/219 (86%)
 Frame = -3

Query: 658 TPEQFQIYKEVTEPSVLKKRSSIKGKTVREAQKTFRVTDANQFVEAGTYLRVHVHPKRFP 479
           TPEQ +++KE T  SVL+KR+S+KGKTVREAQKTFR+T AN+FVE GTYLRV+VHPKRFP
Sbjct: 147 TPEQVKLFKEATARSVLRKRASLKGKTVREAQKTFRITHANEFVEEGTYLRVYVHPKRFP 206

Query: 478 RCYEIDWNSRIIAVTDTFVILDKPAATSVGGTADNIEECCATFASRALGFDAPLRTTHQI 299
           RCYEIDW SR+IA T+++V+LDKPAAT+VGGT  NIEECCATF SRALG D PLRTTHQI
Sbjct: 207 RCYEIDWRSRVIAETESYVVLDKPAATTVGGTPCNIEECCATFVSRALGLDFPLRTTHQI 266

Query: 298 DNCTEGCVVFARTKDFCSEFHSMIREKQVRKLYRALAAAPVPIGIITHYMRPTNVAPRLV 119
           DNCTEGCVVF++TK+FCS FH  IREKQV+KLY ALA APVP+G+I+HYMRP N APR++
Sbjct: 267 DNCTEGCVVFSKTKEFCSIFHGKIREKQVKKLYLALATAPVPVGVISHYMRPVNRAPRII 326

Query: 118 SEDPIGGWHLCQLEVLECKDVAWPAHEVFKNHKVEDCGW 2
           S+D IGGWHLCQLEVLECK+V WP   V   + VEDCGW
Sbjct: 327 SKDHIGGWHLCQLEVLECKEVPWPRAAVEAQNGVEDCGW 365


>ref|XP_006413737.1| hypothetical protein EUTSA_v10025093mg [Eutrema salsugineum]
           gi|557114907|gb|ESQ55190.1| hypothetical protein
           EUTSA_v10025093mg [Eutrema salsugineum]
          Length = 475

 Score =  353 bits (907), Expect = 2e-95
 Identities = 162/219 (73%), Positives = 186/219 (84%)
 Frame = -3

Query: 658 TPEQFQIYKEVTEPSVLKKRSSIKGKTVREAQKTFRVTDANQFVEAGTYLRVHVHPKRFP 479
           TPEQ ++++EVT PSVL KRSSIKGKTVREAQKTFRVT  NQ+VEAGTYLRVHVHPKR P
Sbjct: 144 TPEQIKLFEEVTSPSVLSKRSSIKGKTVREAQKTFRVTHTNQYVEAGTYLRVHVHPKRSP 203

Query: 478 RCYEIDWNSRIIAVTDTFVILDKPAATSVGGTADNIEECCATFASRALGFDAPLRTTHQI 299
           RCYEIDW SRIIAVTD++V+LDKPA T+VGGT DNIEE CATFASRAL    PL+TTHQ+
Sbjct: 204 RCYEIDWKSRIIAVTDSYVVLDKPAGTTVGGTMDNIEETCATFASRALDLPEPLKTTHQV 263

Query: 298 DNCTEGCVVFARTKDFCSEFHSMIREKQVRKLYRALAAAPVPIGIITHYMRPTNVAPRLV 119
           DNCTEGCVVFARTK++C  FH+ I+ K+V+KLYRALAAAP+P G+I+HYMRP N APRLV
Sbjct: 264 DNCTEGCVVFARTKEYCPVFHTKIKNKEVKKLYRALAAAPLPSGVISHYMRPVNRAPRLV 323

Query: 118 SEDPIGGWHLCQLEVLECKDVAWPAHEVFKNHKVEDCGW 2
           SEDPI GWHLCQLE+LECK + WP         ++DCGW
Sbjct: 324 SEDPIKGWHLCQLEILECKKIPWPDAATEAKQDIDDCGW 362


>gb|EMJ14726.1| hypothetical protein PRUPE_ppa020640mg [Prunus persica]
          Length = 477

 Score =  352 bits (904), Expect = 4e-95
 Identities = 165/219 (75%), Positives = 188/219 (85%)
 Frame = -3

Query: 658 TPEQFQIYKEVTEPSVLKKRSSIKGKTVREAQKTFRVTDANQFVEAGTYLRVHVHPKRFP 479
           TPEQ +++KEVT PSVLK R+SIKGKTVREAQKTFR+T A++FVEAGTYLRVHVHPKRFP
Sbjct: 147 TPEQMRVFKEVTAPSVLKNRASIKGKTVREAQKTFRITHADEFVEAGTYLRVHVHPKRFP 206

Query: 478 RCYEIDWNSRIIAVTDTFVILDKPAATSVGGTADNIEECCATFASRALGFDAPLRTTHQI 299
           RCY+IDW SRIIAV++ FV+LDKPA T+VGGT DNIEE CATFA+RALG   PL TTHQI
Sbjct: 207 RCYDIDWKSRIIAVSEEFVVLDKPAGTTVGGTTDNIEESCATFATRALGLTTPLNTTHQI 266

Query: 298 DNCTEGCVVFARTKDFCSEFHSMIREKQVRKLYRALAAAPVPIGIITHYMRPTNVAPRLV 119
           DNCTEGCVV ARTK++CS FH  IREK+V+KLY ALAAAPVP GIITHYMRP NVAPRL+
Sbjct: 267 DNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALAAAPVPTGIITHYMRPINVAPRLI 326

Query: 118 SEDPIGGWHLCQLEVLECKDVAWPAHEVFKNHKVEDCGW 2
           SED I  W LCQLEV+ECK++ WP   V + + VEDCGW
Sbjct: 327 SEDFIERWSLCQLEVMECKEIPWPNAVVEEKYCVEDCGW 365


>ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis
           sativus]
          Length = 475

 Score =  351 bits (901), Expect = 1e-94
 Identities = 161/219 (73%), Positives = 190/219 (86%)
 Frame = -3

Query: 658 TPEQFQIYKEVTEPSVLKKRSSIKGKTVREAQKTFRVTDANQFVEAGTYLRVHVHPKRFP 479
           TPEQ +++K+ TEPS LK R SIKGKTVREAQKTFR+T  ++FVE GTYLRVHVHPKRFP
Sbjct: 143 TPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKTFRITHVDEFVEVGTYLRVHVHPKRFP 202

Query: 478 RCYEIDWNSRIIAVTDTFVILDKPAATSVGGTADNIEECCATFASRALGFDAPLRTTHQI 299
           RCYEIDW SRIIAVT+++V+LDKPA TSVGGT DNIEE CATFA+RALG  +PL TTHQI
Sbjct: 203 RCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLTSPLWTTHQI 262

Query: 298 DNCTEGCVVFARTKDFCSEFHSMIREKQVRKLYRALAAAPVPIGIITHYMRPTNVAPRLV 119
           DNCTEGCV+FARTK++CS FH  IREK+V KLY AL+AAPVP+GIITHYMRP N+APRLV
Sbjct: 263 DNCTEGCVIFARTKEYCSIFHGKIREKKVMKLYLALSAAPVPMGIITHYMRPINIAPRLV 322

Query: 118 SEDPIGGWHLCQLEVLECKDVAWPAHEVFKNHKVEDCGW 2
           S+D I GW +CQLEVLEC++V+WP  ++   ++VEDCGW
Sbjct: 323 SKDCIDGWIICQLEVLECREVSWPDADIEAKYRVEDCGW 361


>ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223542360|gb|EEF43902.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 476

 Score =  351 bits (900), Expect = 1e-94
 Identities = 159/219 (72%), Positives = 190/219 (86%)
 Frame = -3

Query: 658 TPEQFQIYKEVTEPSVLKKRSSIKGKTVREAQKTFRVTDANQFVEAGTYLRVHVHPKRFP 479
           TPEQ +++++ T PSVLKKRSSIKGKTVREAQKTFR+T  +Q++EAGTYLRVHVHPKRFP
Sbjct: 144 TPEQIRLFEKFTAPSVLKKRSSIKGKTVREAQKTFRITHVDQYLEAGTYLRVHVHPKRFP 203

Query: 478 RCYEIDWNSRIIAVTDTFVILDKPAATSVGGTADNIEECCATFASRALGFDAPLRTTHQI 299
           RCY+IDW SRIIAVTD +V+LDKPA TSVGGTADNIEE CATFA+RALG   PL+TTHQI
Sbjct: 204 RCYDIDWKSRIIAVTDCYVVLDKPAGTSVGGTADNIEESCATFATRALGLTTPLKTTHQI 263

Query: 298 DNCTEGCVVFARTKDFCSEFHSMIREKQVRKLYRALAAAPVPIGIITHYMRPTNVAPRLV 119
           DNCTEGCVV AR+K++CS FH  IREK+V+KLY ALAA+PVP+G+I +YMRP N+APRL+
Sbjct: 264 DNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYLALAASPVPVGVIKNYMRPVNIAPRLL 323

Query: 118 SEDPIGGWHLCQLEVLECKDVAWPAHEVFKNHKVEDCGW 2
           SE+ + GWHLCQLEVLEC+ V WP   + + + VEDCGW
Sbjct: 324 SEEFVNGWHLCQLEVLECRKVPWPDAAIEEKYSVEDCGW 362


>ref|XP_006594433.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X2 [Glycine max]
          Length = 390

 Score =  350 bits (899), Expect = 2e-94
 Identities = 164/219 (74%), Positives = 186/219 (84%)
 Frame = -3

Query: 658 TPEQFQIYKEVTEPSVLKKRSSIKGKTVREAQKTFRVTDANQFVEAGTYLRVHVHPKRFP 479
           T EQ +++KEVTEPSVL+KR+SIKGKTVREAQKTFRVT  +QFVE GTYLRVHVHPKRFP
Sbjct: 149 TEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTHVDQFVEPGTYLRVHVHPKRFP 208

Query: 478 RCYEIDWNSRIIAVTDTFVILDKPAATSVGGTADNIEECCATFASRALGFDAPLRTTHQI 299
           R YEIDW SRIIAV +++V+LDKPA TSVGGT DNIEE CATFA+RALG   PL TTHQI
Sbjct: 209 RSYEIDWRSRIIAVAESYVVLDKPAGTSVGGTTDNIEESCATFATRALGMTTPLMTTHQI 268

Query: 298 DNCTEGCVVFARTKDFCSEFHSMIREKQVRKLYRALAAAPVPIGIITHYMRPTNVAPRLV 119
           DNCTEGCVV ARTKD+CS FH  IREK+V+KLY ALAA+P+P GIITHYMRP N+APRL+
Sbjct: 269 DNCTEGCVVLARTKDYCSIFHGKIREKKVKKLYLALAASPLPTGIITHYMRPINMAPRLI 328

Query: 118 SEDPIGGWHLCQLEVLECKDVAWPAHEVFKNHKVEDCGW 2
           SED I GWHLCQLEVLEC+ + WP   +   + VEDCGW
Sbjct: 329 SEDFIKGWHLCQLEVLECRKIPWPTTAIQDKYCVEDCGW 367


>ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X1 [Glycine max]
          Length = 478

 Score =  350 bits (899), Expect = 2e-94
 Identities = 164/219 (74%), Positives = 186/219 (84%)
 Frame = -3

Query: 658 TPEQFQIYKEVTEPSVLKKRSSIKGKTVREAQKTFRVTDANQFVEAGTYLRVHVHPKRFP 479
           T EQ +++KEVTEPSVL+KR+SIKGKTVREAQKTFRVT  +QFVE GTYLRVHVHPKRFP
Sbjct: 149 TEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTHVDQFVEPGTYLRVHVHPKRFP 208

Query: 478 RCYEIDWNSRIIAVTDTFVILDKPAATSVGGTADNIEECCATFASRALGFDAPLRTTHQI 299
           R YEIDW SRIIAV +++V+LDKPA TSVGGT DNIEE CATFA+RALG   PL TTHQI
Sbjct: 209 RSYEIDWRSRIIAVAESYVVLDKPAGTSVGGTTDNIEESCATFATRALGMTTPLMTTHQI 268

Query: 298 DNCTEGCVVFARTKDFCSEFHSMIREKQVRKLYRALAAAPVPIGIITHYMRPTNVAPRLV 119
           DNCTEGCVV ARTKD+CS FH  IREK+V+KLY ALAA+P+P GIITHYMRP N+APRL+
Sbjct: 269 DNCTEGCVVLARTKDYCSIFHGKIREKKVKKLYLALAASPLPTGIITHYMRPINMAPRLI 328

Query: 118 SEDPIGGWHLCQLEVLECKDVAWPAHEVFKNHKVEDCGW 2
           SED I GWHLCQLEVLEC+ + WP   +   + VEDCGW
Sbjct: 329 SEDFIKGWHLCQLEVLECRKIPWPTTAIQDKYCVEDCGW 367


>ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 6,
           chloroplastic-like [Cucumis sativus]
          Length = 475

 Score =  350 bits (897), Expect = 3e-94
 Identities = 161/219 (73%), Positives = 188/219 (85%)
 Frame = -3

Query: 658 TPEQFQIYKEVTEPSVLKKRSSIKGKTVREAQKTFRVTDANQFVEAGTYLRVHVHPKRFP 479
           TPEQ +++K  TEPS LK R SIKGKTVREAQKTFR+T  ++FVE GTYLRVHVHPKRFP
Sbjct: 143 TPEQIRLFKNXTEPSFLKGRKSIKGKTVREAQKTFRITHVDEFVEVGTYLRVHVHPKRFP 202

Query: 478 RCYEIDWNSRIIAVTDTFVILDKPAATSVGGTADNIEECCATFASRALGFDAPLRTTHQI 299
           RCYEIDW SRIIAVT+++V+LDKPA TSVGGT DNIEE CATFA+RALG  +PL TTHQI
Sbjct: 203 RCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLTSPLWTTHQI 262

Query: 298 DNCTEGCVVFARTKDFCSEFHSMIREKQVRKLYRALAAAPVPIGIITHYMRPTNVAPRLV 119
           DNCTEGCV+FARTK++CS FH  IREK+V KLY AL+AAPVP+GIITHYMRP N+APRLV
Sbjct: 263 DNCTEGCVIFARTKEYCSIFHGKIREKKVMKLYLALSAAPVPMGIITHYMRPINIAPRLV 322

Query: 118 SEDPIGGWHLCQLEVLECKDVAWPAHEVFKNHKVEDCGW 2
           S+D I GW +CQLEVLEC++V+WP  +    ++VEDCGW
Sbjct: 323 SKDCIDGWIICQLEVLECREVSWPDADTEAKYRVEDCGW 361