BLASTX nr result
ID: Zingiber23_contig00003630
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00003630
(220 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004966817.1| PREDICTED: uncharacterized protein LOC101757... 60 3e-07
gb|EMT10650.1| hypothetical protein F775_06631 [Aegilops tauschii] 60 4e-07
ref|XP_006649052.1| PREDICTED: uncharacterized protein LOC102706... 59 9e-07
ref|XP_006306049.1| hypothetical protein CARUB_v10011358mg [Caps... 59 9e-07
ref|XP_004308416.1| PREDICTED: uncharacterized protein LOC101308... 59 9e-07
ref|XP_003564059.1| PREDICTED: uncharacterized protein LOC100837... 59 9e-07
gb|EMS65314.1| hypothetical protein TRIUR3_00260 [Triticum urartu] 58 1e-06
gb|EMT22417.1| hypothetical protein F775_17076 [Aegilops tauschii] 57 2e-06
gb|EMS68404.1| hypothetical protein TRIUR3_31159 [Triticum urartu] 57 2e-06
ref|XP_002466862.1| hypothetical protein SORBIDRAFT_01g015390 [S... 57 2e-06
gb|EMT04797.1| hypothetical protein F775_20452 [Aegilops tauschii] 57 3e-06
dbj|BAJ92613.1| predicted protein [Hordeum vulgare subsp. vulgar... 57 3e-06
ref|XP_002271842.1| PREDICTED: uncharacterized protein LOC100252... 57 3e-06
ref|NP_568185.1| mitochondrial transcription termination factor ... 57 3e-06
gb|AAF80646.1|AC012190_2 Contains similarity to F28O16.19 a puta... 57 3e-06
ref|NP_173539.1| transcription termination factor family protein... 57 3e-06
ref|XP_002871294.1| mitochondrial transcription termination fact... 57 3e-06
gb|EMT12304.1| hypothetical protein F775_20065 [Aegilops tauschii] 56 4e-06
dbj|BAK03767.1| predicted protein [Hordeum vulgare subsp. vulgare] 56 4e-06
ref|XP_006289922.1| hypothetical protein CARUB_v10003538mg [Caps... 56 6e-06
>ref|XP_004966817.1| PREDICTED: uncharacterized protein LOC101757972 [Setaria italica]
Length = 390
Score = 60.1 bits (144), Expect = 3e-07
Identities = 28/72 (38%), Positives = 45/72 (62%)
Frame = +3
Query: 3 EKFEAHVKIMNSFGWSNSDFVTVVKKHPTFLCLSTEVLQRKMEFLVKDVGMAPLDIAKKA 182
EK + ++ + FGWS D + V+K P L +S E LQR +EFL +DVG+ IA++
Sbjct: 254 EKIDEKIRTLEMFGWSQDDVLMTVRKMPHLLNMSKERLQRNLEFLARDVGLEIPYIAQRP 313
Query: 183 VVLRLGLEKRLI 218
V++ L++RL+
Sbjct: 314 VLVMYSLDRRLV 325
>gb|EMT10650.1| hypothetical protein F775_06631 [Aegilops tauschii]
Length = 387
Score = 59.7 bits (143), Expect = 4e-07
Identities = 30/63 (47%), Positives = 42/63 (66%)
Frame = +3
Query: 27 IMNSFGWSNSDFVTVVKKHPTFLCLSTEVLQRKMEFLVKDVGMAPLDIAKKAVVLRLGLE 206
+ N+F WS+++ V+K+P L S E L+RK EFLV +VG+ P+ IA + VVL L LE
Sbjct: 258 LKNTFRWSDAEACIAVRKYPCVLKKSKESLKRKSEFLVSEVGLEPVSIAHRPVVLSLSLE 317
Query: 207 KRL 215
RL
Sbjct: 318 GRL 320
>ref|XP_006649052.1| PREDICTED: uncharacterized protein LOC102706540 [Oryza brachyantha]
Length = 396
Score = 58.5 bits (140), Expect = 9e-07
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +3
Query: 3 EKFEAHVKIMN-SFGWSNSDFVTVVKKHPTFLCLSTEVLQRKMEFLVKDVGMAPLDIAKK 179
EK +A V ++ S GWS + V K P L S E L+R EFLV +VG+ P IA++
Sbjct: 258 EKVDAKVAVLKESLGWSQEEVSLAVSKAPRILVASAERLRRNAEFLVNEVGLQPQYIARR 317
Query: 180 AVVLRLGLEKRLI 218
+V+L LE+RL+
Sbjct: 318 SVLLMYSLERRLV 330
>ref|XP_006306049.1| hypothetical protein CARUB_v10011358mg [Capsella rubella]
gi|482574760|gb|EOA38947.1| hypothetical protein
CARUB_v10011358mg [Capsella rubella]
Length = 398
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/68 (39%), Positives = 40/68 (58%)
Frame = +3
Query: 12 EAHVKIMNSFGWSNSDFVTVVKKHPTFLCLSTEVLQRKMEFLVKDVGMAPLDIAKKAVVL 191
E K+ FGWS DFV+ + + P +S E + ME+LV ++G+ DIA + VVL
Sbjct: 274 ERKYKLFQRFGWSKQDFVSAIMRFPNCATVSDEKIMYTMEYLVNNIGLQARDIAARPVVL 333
Query: 192 RLGLEKRL 215
L +EKR+
Sbjct: 334 GLSMEKRI 341
>ref|XP_004308416.1| PREDICTED: uncharacterized protein LOC101308915 [Fragaria vesca
subsp. vesca]
Length = 336
Score = 58.5 bits (140), Expect = 9e-07
Identities = 25/71 (35%), Positives = 44/71 (61%)
Frame = +3
Query: 6 KFEAHVKIMNSFGWSNSDFVTVVKKHPTFLCLSTEVLQRKMEFLVKDVGMAPLDIAKKAV 185
K+E ++ +GW+ D ++ +++P F+ LS +++ KM FLV +G P D+A+ +
Sbjct: 193 KWEQKMQFYKGWGWTEDDIISAFRQNPMFMKLSEKIVSPKMYFLVNKMGWQPTDVARNSY 252
Query: 186 VLRLGLEKRLI 218
VL LEKR+I
Sbjct: 253 VLGYSLEKRII 263
>ref|XP_003564059.1| PREDICTED: uncharacterized protein LOC100837461 [Brachypodium
distachyon]
Length = 391
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +3
Query: 3 EKFEAHVKIMNSFGWSNSDFVTVVKKHPTFLCLSTEVLQRKMEFLVKDVGMAPLDIAKKA 182
EK ++I+ GWS D + VKK P L +S E L + M FL KD G+ IA++
Sbjct: 248 EKLADKIRILEMHGWSQDDVLLAVKKMPGILTMSEERLPKNMHFLTKDAGLEISYIAQRP 307
Query: 183 VVLRLGLEKRLI 218
V+L+ LE+RL+
Sbjct: 308 VLLKYSLERRLL 319
>gb|EMS65314.1| hypothetical protein TRIUR3_00260 [Triticum urartu]
Length = 174
Score = 57.8 bits (138), Expect = 1e-06
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Frame = +3
Query: 3 EKFEAHVKIM-NSFGWSNSDFVTVVKKHPTFLCLSTEVLQRKMEFLVKDVGMAPLDIAKK 179
EK A V + N+F WS+++ V+K+P+ L S E L+ + EFLV +VG+ P+ IA +
Sbjct: 30 EKIAAKVDYLKNTFRWSDAEACVAVRKYPSVLRKSKESLKLRSEFLVSEVGLEPVSIAHQ 89
Query: 180 AVVLRLGLEKRL 215
VVL L LE RL
Sbjct: 90 PVVLSLSLEGRL 101
>gb|EMT22417.1| hypothetical protein F775_17076 [Aegilops tauschii]
Length = 398
Score = 57.4 bits (137), Expect = 2e-06
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = +3
Query: 3 EKFEAHVKIMN-SFGWSNSDFVTVVKKHPTFLCLSTEVLQRKMEFLVKDVGMAPLDIAKK 179
EK +A + ++ + GWS + + K P L S E L+R EFLVK+VG+ P IA++
Sbjct: 262 EKVDAKIAVLRETLGWSKEEVSLAISKAPRILVASEERLRRNAEFLVKEVGLEPQYIARR 321
Query: 180 AVVLRLGLEKRLI 218
+V+L LE+RL+
Sbjct: 322 SVLLMYSLERRLM 334
>gb|EMS68404.1| hypothetical protein TRIUR3_31159 [Triticum urartu]
Length = 398
Score = 57.4 bits (137), Expect = 2e-06
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = +3
Query: 3 EKFEAHVKIMN-SFGWSNSDFVTVVKKHPTFLCLSTEVLQRKMEFLVKDVGMAPLDIAKK 179
EK +A + ++ + GWS + + K P L S E L+R EFLVK+VG+ P IA++
Sbjct: 262 EKVDAKIAVLRETLGWSKEEVSLAISKAPRILVASEERLRRNAEFLVKEVGLEPQYIARR 321
Query: 180 AVVLRLGLEKRLI 218
+V+L LE+RL+
Sbjct: 322 SVLLMYSLERRLM 334
>ref|XP_002466862.1| hypothetical protein SORBIDRAFT_01g015390 [Sorghum bicolor]
gi|241920716|gb|EER93860.1| hypothetical protein
SORBIDRAFT_01g015390 [Sorghum bicolor]
Length = 389
Score = 57.4 bits (137), Expect = 2e-06
Identities = 25/72 (34%), Positives = 45/72 (62%)
Frame = +3
Query: 3 EKFEAHVKIMNSFGWSNSDFVTVVKKHPTFLCLSTEVLQRKMEFLVKDVGMAPLDIAKKA 182
EK E+++++ GWS D + V+K P L L+ E +++ ++FL+ DVG+ DI +
Sbjct: 244 EKLESNIQLFEKLGWSRDDIASAVRKAPNILNLAPERVRKSLDFLMGDVGLQMPDIVYRP 303
Query: 183 VVLRLGLEKRLI 218
V+L +E+RL+
Sbjct: 304 VLLLYSVERRLL 315
>gb|EMT04797.1| hypothetical protein F775_20452 [Aegilops tauschii]
Length = 386
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/63 (42%), Positives = 43/63 (68%)
Frame = +3
Query: 27 IMNSFGWSNSDFVTVVKKHPTFLCLSTEVLQRKMEFLVKDVGMAPLDIAKKAVVLRLGLE 206
+ N+F WS ++ V + K P L +S ++LQRK EFL+ +VG+ P+ IA ++V+L L LE
Sbjct: 257 LKNTFRWSAAEVVIALSKAPMLLKISKDMLQRKSEFLLSEVGLEPVYIAHRSVILCLSLE 316
Query: 207 KRL 215
R+
Sbjct: 317 GRV 319
>dbj|BAJ92613.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531974|dbj|BAK01363.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 398
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = +3
Query: 3 EKFEAHVKIMN-SFGWSNSDFVTVVKKHPTFLCLSTEVLQRKMEFLVKDVGMAPLDIAKK 179
EK +A + ++ + GWS + + K P L S E L+R EFL+K+VG+ P IA++
Sbjct: 262 EKVDAKIAVLRQTLGWSKEEVSLAISKAPRILVASEERLRRNAEFLIKEVGLEPQYIARR 321
Query: 180 AVVLRLGLEKRLI 218
+V+L LE+RL+
Sbjct: 322 SVLLMYSLERRLM 334
>ref|XP_002271842.1| PREDICTED: uncharacterized protein LOC100252260 [Vitis vinifera]
Length = 365
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/71 (35%), Positives = 43/71 (60%)
Frame = +3
Query: 6 KFEAHVKIMNSFGWSNSDFVTVVKKHPTFLCLSTEVLQRKMEFLVKDVGMAPLDIAKKAV 185
K+E+ V + SFGW +F+ + K P F+ S +++ ++FL+ ++ P DI K +
Sbjct: 236 KWESKVSVFRSFGWGEEEFIALFVKQPQFMSNSETRIRKCLDFLINELNWMPEDIFKYPM 295
Query: 186 VLRLGLEKRLI 218
VL L LEKR++
Sbjct: 296 VLLLSLEKRVV 306
>ref|NP_568185.1| mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
gi|13878065|gb|AAK44110.1|AF370295_1 unknown protein
[Arabidopsis thaliana] gi|6562304|emb|CAB62602.1|
putative protein [Arabidopsis thaliana]
gi|10176724|dbj|BAB09954.1| unnamed protein product
[Arabidopsis thaliana] gi|17104655|gb|AAL34216.1|
unknown protein [Arabidopsis thaliana]
gi|21592327|gb|AAM64278.1| unknown [Arabidopsis
thaliana] gi|332003836|gb|AED91219.1| mitochondrial
transcription termination factor family protein
[Arabidopsis thaliana]
Length = 405
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/65 (41%), Positives = 38/65 (58%)
Frame = +3
Query: 24 KIMNSFGWSNSDFVTVVKKHPTFLCLSTEVLQRKMEFLVKDVGMAPLDIAKKAVVLRLGL 203
++ +GWS D + KKHP + LS + R ME+ V ++ MAP IA+ VVL L
Sbjct: 284 EVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSL 343
Query: 204 EKRLI 218
EKR+I
Sbjct: 344 EKRII 348
>gb|AAF80646.1|AC012190_2 Contains similarity to F28O16.19 a putative translation initiation
factor IF-2 gi|6143896 from Arabidopsis thaliana
gb|AC010718. It is a member of Elongation factor Tu
family. ESTs gb|AI994592 and gb|T20793 come from thias
gene [Arabidopsis thaliana]
Length = 1552
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/68 (36%), Positives = 39/68 (57%)
Frame = +3
Query: 12 EAHVKIMNSFGWSNSDFVTVVKKHPTFLCLSTEVLQRKMEFLVKDVGMAPLDIAKKAVVL 191
E K+ FGWS DFV + + P + +S E + +E+LV ++G+ DI + VVL
Sbjct: 1428 ERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVL 1487
Query: 192 RLGLEKRL 215
L +EKR+
Sbjct: 1488 SLSMEKRI 1495
>ref|NP_173539.1| transcription termination factor family protein [Arabidopsis
thaliana] gi|332191949|gb|AEE30070.1| transcription
termination factor family protein [Arabidopsis thaliana]
Length = 390
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/68 (36%), Positives = 39/68 (57%)
Frame = +3
Query: 12 EAHVKIMNSFGWSNSDFVTVVKKHPTFLCLSTEVLQRKMEFLVKDVGMAPLDIAKKAVVL 191
E K+ FGWS DFV + + P + +S E + +E+LV ++G+ DI + VVL
Sbjct: 266 ERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVL 325
Query: 192 RLGLEKRL 215
L +EKR+
Sbjct: 326 SLSMEKRI 333
>ref|XP_002871294.1| mitochondrial transcription termination factor family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297317131|gb|EFH47553.1| mitochondrial transcription
termination factor family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 404
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/65 (41%), Positives = 38/65 (58%)
Frame = +3
Query: 24 KIMNSFGWSNSDFVTVVKKHPTFLCLSTEVLQRKMEFLVKDVGMAPLDIAKKAVVLRLGL 203
++ +GWS D + KKHP + LS + R MEF V ++ +AP IA+ VVL L
Sbjct: 283 EVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEFFVNEMNLAPRSIAECPVVLFFSL 342
Query: 204 EKRLI 218
EKR+I
Sbjct: 343 EKRII 347
>gb|EMT12304.1| hypothetical protein F775_20065 [Aegilops tauschii]
Length = 456
Score = 56.2 bits (134), Expect = 4e-06
Identities = 26/63 (41%), Positives = 40/63 (63%)
Frame = +3
Query: 27 IMNSFGWSNSDFVTVVKKHPTFLCLSTEVLQRKMEFLVKDVGMAPLDIAKKAVVLRLGLE 206
+ +FGWS+++ V K+P L S +LQ K EFL+ +VG+ P IA + V++ L LE
Sbjct: 257 LKKTFGWSDAEVGVAVSKYPMLLTKSHHMLQSKSEFLISEVGLEPAFIAHRPVIICLSLE 316
Query: 207 KRL 215
+RL
Sbjct: 317 RRL 319
>dbj|BAK03767.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 389
Score = 56.2 bits (134), Expect = 4e-06
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +3
Query: 3 EKFEAHVK-IMNSFGWSNSDFVTVVKKHPTFLCLSTEVLQRKMEFLVKDVGMAPLDIAKK 179
EK A V+ + + WS++D V K PT L ST+VLQ K EFL+ VG+ P IA +
Sbjct: 251 EKIAAKVEQLKKALRWSDADVGIAVCKWPTVLWWSTDVLQHKSEFLISKVGLEPAHIAHR 310
Query: 180 AVVLRLGLEKRL 215
V+L L LE RL
Sbjct: 311 PVMLGLSLEGRL 322
>ref|XP_006289922.1| hypothetical protein CARUB_v10003538mg [Capsella rubella]
gi|482558628|gb|EOA22820.1| hypothetical protein
CARUB_v10003538mg [Capsella rubella]
Length = 407
Score = 55.8 bits (133), Expect = 6e-06
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +3
Query: 24 KIMNSFGWSNSDFVTVVKKHPTFLCLSTEVLQRKMEFLVKDVGMAPLDIAKKAVVLRLGL 203
++ +GWS +D + KKHP + LS + R ME+ V ++ +AP IA+ VVL L
Sbjct: 286 EVYQRWGWSEADIMCAFKKHPHCMMLSERKINRTMEYFVNEMNLAPRSIAQCPVVLFFSL 345
Query: 204 EKRLI 218
EKR+I
Sbjct: 346 EKRII 350