BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00003587
         (479 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS55038.1| U-box domain-containing protein 4 [Triticum urartu]     68   1e-09
ref|XP_006466521.1| PREDICTED: U-box domain-containing protein 4...    67   2e-09
ref|XP_006466517.1| PREDICTED: U-box domain-containing protein 4...    67   2e-09
ref|XP_006426022.1| hypothetical protein CICLE_v10024899mg [Citr...    67   2e-09
gb|EOX91593.1| RING/U-box superfamily protein with ARM repeat do...    67   2e-09
dbj|BAK03073.1| predicted protein [Hordeum vulgare subsp. vulgare]     66   4e-09
dbj|BAJ93866.1| predicted protein [Hordeum vulgare subsp. vulgare]     66   4e-09
ref|XP_006404783.1| hypothetical protein EUTSA_v10000047mg [Eutr...    66   6e-09
ref|XP_006380667.1| hypothetical protein POPTR_0007s10280g [Popu...    66   6e-09
ref|XP_006293682.1| hypothetical protein CARUB_v10022640mg [Caps...    66   6e-09
ref|XP_002880484.1| armadillo/beta-catenin repeat family protein...    66   6e-09
ref|NP_179895.6| RING/U-box domain and ARM repeat-containing pro...    66   6e-09
ref|NP_001189583.1| RING/U-box domain and ARM repeat-containing ...    66   6e-09
ref|XP_002332232.1| predicted protein [Populus trichocarpa]            66   6e-09
ref|XP_006659047.1| PREDICTED: U-box domain-containing protein 4...    65   7e-09
ref|XP_002306495.2| hypothetical protein POPTR_0005s18820g [Popu...    65   7e-09
ref|XP_004972465.1| PREDICTED: U-box domain-containing protein 4...    65   7e-09
gb|EMT16948.1| U-box domain-containing protein 4 [Aegilops tausc...    65   7e-09
gb|EMS61710.1| U-box domain-containing protein 4 [Triticum urartu]     65   7e-09
ref|NP_001060820.1| Os08g0110500 [Oryza sativa Japonica Group] g...    65   7e-09

>gb|EMS55038.1| U-box domain-containing protein 4 [Triticum urartu]
          Length = 440

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 35/38 (92%), Positives = 37/38 (97%), Gaps = 1/38 (2%)
 Frame = +3

Query: 3   AVPPLVALSQSGTPRAKEKAQALLSYFRSQR-GNAGRR 113
           AVPPLVALSQSGTPRA+EKAQALLSYFRSQR GN+GRR
Sbjct: 403 AVPPLVALSQSGTPRAREKAQALLSYFRSQRHGNSGRR 440


>ref|XP_006466521.1| PREDICTED: U-box domain-containing protein 4-like isoform X5
           [Citrus sinensis] gi|568824264|ref|XP_006466522.1|
           PREDICTED: U-box domain-containing protein 4-like
           isoform X6 [Citrus sinensis]
          Length = 828

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/37 (94%), Positives = 36/37 (97%), Gaps = 1/37 (2%)
 Frame = +3

Query: 3   AVPPLVALSQSGTPRAKEKAQALLSYFRSQR-GNAGR 110
           AVPPLVALSQSGTPRAKEKAQALLSYFR+QR GNAGR
Sbjct: 791 AVPPLVALSQSGTPRAKEKAQALLSYFRNQRHGNAGR 827


>ref|XP_006466517.1| PREDICTED: U-box domain-containing protein 4-like isoform X1
           [Citrus sinensis] gi|568824256|ref|XP_006466518.1|
           PREDICTED: U-box domain-containing protein 4-like
           isoform X2 [Citrus sinensis]
           gi|568824258|ref|XP_006466519.1| PREDICTED: U-box
           domain-containing protein 4-like isoform X3 [Citrus
           sinensis] gi|568824260|ref|XP_006466520.1| PREDICTED:
           U-box domain-containing protein 4-like isoform X4
           [Citrus sinensis]
          Length = 834

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/37 (94%), Positives = 36/37 (97%), Gaps = 1/37 (2%)
 Frame = +3

Query: 3   AVPPLVALSQSGTPRAKEKAQALLSYFRSQR-GNAGR 110
           AVPPLVALSQSGTPRAKEKAQALLSYFR+QR GNAGR
Sbjct: 797 AVPPLVALSQSGTPRAKEKAQALLSYFRNQRHGNAGR 833


>ref|XP_006426022.1| hypothetical protein CICLE_v10024899mg [Citrus clementina]
           gi|567866801|ref|XP_006426023.1| hypothetical protein
           CICLE_v10024899mg [Citrus clementina]
           gi|567866803|ref|XP_006426024.1| hypothetical protein
           CICLE_v10024899mg [Citrus clementina]
           gi|557528012|gb|ESR39262.1| hypothetical protein
           CICLE_v10024899mg [Citrus clementina]
           gi|557528013|gb|ESR39263.1| hypothetical protein
           CICLE_v10024899mg [Citrus clementina]
           gi|557528014|gb|ESR39264.1| hypothetical protein
           CICLE_v10024899mg [Citrus clementina]
          Length = 828

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/37 (94%), Positives = 36/37 (97%), Gaps = 1/37 (2%)
 Frame = +3

Query: 3   AVPPLVALSQSGTPRAKEKAQALLSYFRSQR-GNAGR 110
           AVPPLVALSQSGTPRAKEKAQALLSYFR+QR GNAGR
Sbjct: 791 AVPPLVALSQSGTPRAKEKAQALLSYFRNQRHGNAGR 827


>gb|EOX91593.1| RING/U-box superfamily protein with ARM repeat domain isoform 1
           [Theobroma cacao] gi|508699698|gb|EOX91594.1| ATP
           synthase alpha/beta family protein isoform 1 [Theobroma
           cacao] gi|508699699|gb|EOX91595.1| RING/U-box
           superfamily protein with ARM repeat domain isoform 1
           [Theobroma cacao] gi|508699700|gb|EOX91596.1| RING/U-box
           superfamily protein with ARM repeat domain isoform 1
           [Theobroma cacao]
          Length = 834

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/37 (94%), Positives = 36/37 (97%), Gaps = 1/37 (2%)
 Frame = +3

Query: 3   AVPPLVALSQSGTPRAKEKAQALLSYFRSQR-GNAGR 110
           AVPPLVALSQSGTPRAKEKAQALLSYFR+QR GNAGR
Sbjct: 797 AVPPLVALSQSGTPRAKEKAQALLSYFRTQRHGNAGR 833


>dbj|BAK03073.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 443

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 34/38 (89%), Positives = 36/38 (94%), Gaps = 1/38 (2%)
 Frame = +3

Query: 3   AVPPLVALSQSGTPRAKEKAQALLSYFRSQR-GNAGRR 113
           AVPPLVALSQSGTPRA+EKAQ LLSYFRSQR GN+GRR
Sbjct: 406 AVPPLVALSQSGTPRAREKAQVLLSYFRSQRHGNSGRR 443


>dbj|BAJ93866.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 443

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 34/38 (89%), Positives = 36/38 (94%), Gaps = 1/38 (2%)
 Frame = +3

Query: 3   AVPPLVALSQSGTPRAKEKAQALLSYFRSQR-GNAGRR 113
           AVPPLVALSQSGTPRA+EKAQ LLSYFRSQR GN+GRR
Sbjct: 406 AVPPLVALSQSGTPRAREKAQVLLSYFRSQRHGNSGRR 443


>ref|XP_006404783.1| hypothetical protein EUTSA_v10000047mg [Eutrema salsugineum]
           gi|557105911|gb|ESQ46236.1| hypothetical protein
           EUTSA_v10000047mg [Eutrema salsugineum]
          Length = 826

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 34/37 (91%), Positives = 36/37 (97%), Gaps = 1/37 (2%)
 Frame = +3

Query: 3   AVPPLVALSQSGTPRAKEKAQALLSYFRSQR-GNAGR 110
           AVPPLVALSQSGTPRA+EKAQALLSYFR+QR GNAGR
Sbjct: 789 AVPPLVALSQSGTPRAREKAQALLSYFRNQRHGNAGR 825


>ref|XP_006380667.1| hypothetical protein POPTR_0007s10280g [Populus trichocarpa]
           gi|550334557|gb|ERP58464.1| hypothetical protein
           POPTR_0007s10280g [Populus trichocarpa]
          Length = 840

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 34/37 (91%), Positives = 36/37 (97%), Gaps = 1/37 (2%)
 Frame = +3

Query: 3   AVPPLVALSQSGTPRAKEKAQALLSYFRSQR-GNAGR 110
           AVPPLVALSQSGTPRAKEKAQ+LLSYFR+QR GNAGR
Sbjct: 803 AVPPLVALSQSGTPRAKEKAQSLLSYFRNQRHGNAGR 839


>ref|XP_006293682.1| hypothetical protein CARUB_v10022640mg [Capsella rubella]
           gi|482562390|gb|EOA26580.1| hypothetical protein
           CARUB_v10022640mg [Capsella rubella]
          Length = 835

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 34/37 (91%), Positives = 36/37 (97%), Gaps = 1/37 (2%)
 Frame = +3

Query: 3   AVPPLVALSQSGTPRAKEKAQALLSYFRSQR-GNAGR 110
           AVPPLVALSQSGTPRA+EKAQALLSYFR+QR GNAGR
Sbjct: 798 AVPPLVALSQSGTPRAREKAQALLSYFRNQRHGNAGR 834


>ref|XP_002880484.1| armadillo/beta-catenin repeat family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297326323|gb|EFH56743.1|
           armadillo/beta-catenin repeat family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 829

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 34/37 (91%), Positives = 36/37 (97%), Gaps = 1/37 (2%)
 Frame = +3

Query: 3   AVPPLVALSQSGTPRAKEKAQALLSYFRSQR-GNAGR 110
           AVPPLVALSQSGTPRA+EKAQALLSYFR+QR GNAGR
Sbjct: 792 AVPPLVALSQSGTPRAREKAQALLSYFRNQRHGNAGR 828


>ref|NP_179895.6| RING/U-box domain and ARM repeat-containing protein [Arabidopsis
           thaliana] gi|330252323|gb|AEC07417.1| RING/U-box domain
           and ARM repeat-containing protein [Arabidopsis thaliana]
          Length = 829

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 34/37 (91%), Positives = 36/37 (97%), Gaps = 1/37 (2%)
 Frame = +3

Query: 3   AVPPLVALSQSGTPRAKEKAQALLSYFRSQR-GNAGR 110
           AVPPLVALSQSGTPRA+EKAQALLSYFR+QR GNAGR
Sbjct: 792 AVPPLVALSQSGTPRAREKAQALLSYFRNQRHGNAGR 828


>ref|NP_001189583.1| RING/U-box domain and ARM repeat-containing protein [Arabidopsis
           thaliana] gi|357529165|sp|O22193.3|PUB4_ARATH RecName:
           Full=U-box domain-containing protein 4; AltName:
           Full=Plant U-box protein 4 gi|330252324|gb|AEC07418.1|
           RING/U-box domain and ARM repeat-containing protein
           [Arabidopsis thaliana]
          Length = 826

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 34/37 (91%), Positives = 36/37 (97%), Gaps = 1/37 (2%)
 Frame = +3

Query: 3   AVPPLVALSQSGTPRAKEKAQALLSYFRSQR-GNAGR 110
           AVPPLVALSQSGTPRA+EKAQALLSYFR+QR GNAGR
Sbjct: 789 AVPPLVALSQSGTPRAREKAQALLSYFRNQRHGNAGR 825


>ref|XP_002332232.1| predicted protein [Populus trichocarpa]
          Length = 698

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 34/37 (91%), Positives = 36/37 (97%), Gaps = 1/37 (2%)
 Frame = +3

Query: 3   AVPPLVALSQSGTPRAKEKAQALLSYFRSQR-GNAGR 110
           AVPPLVALSQSGTPRAKEKAQ+LLSYFR+QR GNAGR
Sbjct: 662 AVPPLVALSQSGTPRAKEKAQSLLSYFRNQRHGNAGR 698


>ref|XP_006659047.1| PREDICTED: U-box domain-containing protein 4-like [Oryza
           brachyantha]
          Length = 826

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 34/38 (89%), Positives = 36/38 (94%), Gaps = 1/38 (2%)
 Frame = +3

Query: 3   AVPPLVALSQSGTPRAKEKAQALLSYFRSQR-GNAGRR 113
           AVPPLVALSQSGTPRA+EKAQALLSYFRSQR GN+ RR
Sbjct: 789 AVPPLVALSQSGTPRAREKAQALLSYFRSQRHGNSARR 826


>ref|XP_002306495.2| hypothetical protein POPTR_0005s18820g [Populus trichocarpa]
           gi|550339266|gb|EEE93491.2| hypothetical protein
           POPTR_0005s18820g [Populus trichocarpa]
          Length = 840

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 34/37 (91%), Positives = 36/37 (97%), Gaps = 1/37 (2%)
 Frame = +3

Query: 3   AVPPLVALSQSGTPRAKEKAQALLSYFRSQR-GNAGR 110
           AVPPLVALSQSGTPRAKEKAQALLS+FR+QR GNAGR
Sbjct: 803 AVPPLVALSQSGTPRAKEKAQALLSFFRNQRHGNAGR 839


>ref|XP_004972465.1| PREDICTED: U-box domain-containing protein 4-like [Setaria italica]
          Length = 829

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 34/38 (89%), Positives = 36/38 (94%), Gaps = 1/38 (2%)
 Frame = +3

Query: 3   AVPPLVALSQSGTPRAKEKAQALLSYFRSQR-GNAGRR 113
           AVPPLVALSQSGTPRA+EKAQALLSYFRSQR GN+ RR
Sbjct: 792 AVPPLVALSQSGTPRAREKAQALLSYFRSQRHGNSARR 829


>gb|EMT16948.1| U-box domain-containing protein 4 [Aegilops tauschii]
          Length = 855

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 34/38 (89%), Positives = 36/38 (94%), Gaps = 1/38 (2%)
 Frame = +3

Query: 3   AVPPLVALSQSGTPRAKEKAQALLSYFRSQR-GNAGRR 113
           AVPPLVALSQSGTPRA+EKAQALLSYFRSQR GN+ RR
Sbjct: 818 AVPPLVALSQSGTPRAREKAQALLSYFRSQRHGNSARR 855


>gb|EMS61710.1| U-box domain-containing protein 4 [Triticum urartu]
          Length = 865

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 34/38 (89%), Positives = 36/38 (94%), Gaps = 1/38 (2%)
 Frame = +3

Query: 3   AVPPLVALSQSGTPRAKEKAQALLSYFRSQR-GNAGRR 113
           AVPPLVALSQSGTPRA+EKAQALLSYFRSQR GN+ RR
Sbjct: 828 AVPPLVALSQSGTPRAREKAQALLSYFRSQRHGNSARR 865


>ref|NP_001060820.1| Os08g0110500 [Oryza sativa Japonica Group]
           gi|42408388|dbj|BAD09539.1| putative arm
           repeat-containing protein [Oryza sativa Japonica Group]
           gi|113622789|dbj|BAF22734.1| Os08g0110500 [Oryza sativa
           Japonica Group] gi|222639787|gb|EEE67919.1| hypothetical
           protein OsJ_25785 [Oryza sativa Japonica Group]
          Length = 824

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 34/38 (89%), Positives = 36/38 (94%), Gaps = 1/38 (2%)
 Frame = +3

Query: 3   AVPPLVALSQSGTPRAKEKAQALLSYFRSQR-GNAGRR 113
           AVPPLVALSQSGTPRA+EKAQALLSYFRSQR GN+ RR
Sbjct: 787 AVPPLVALSQSGTPRAREKAQALLSYFRSQRHGNSARR 824