BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00003471
         (1102 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA99242.2| FLK, putative, expressed [Oryza sativa Japonica G...   402   e-109
ref|XP_004982386.1| PREDICTED: poly(rC)-binding protein 3-like [...   399   e-109
ref|XP_003562255.1| PREDICTED: poly(rC)-binding protein 1-like [...   399   e-109
ref|NP_001050707.2| Os03g0627500 [Oryza sativa Japonica Group] g...   390   e-106
gb|EEC75782.1| hypothetical protein OsI_12699 [Oryza sativa Indi...   390   e-106
gb|AAL31692.1|AC092390_13 putative RNA binding protein [Oryza sa...   390   e-106
ref|XP_002466785.1| hypothetical protein SORBIDRAFT_01g014200 [S...   388   e-105
gb|AFW68178.1| nucleic acid binding protein [Zea mays]                384   e-104
dbj|BAK02991.1| predicted protein [Hordeum vulgare subsp. vulgare]    382   e-103
ref|NP_001151605.1| nucleic acid binding protein [Zea mays] gi|1...   379   e-103
ref|XP_006487774.1| PREDICTED: poly(rC)-binding protein 3-like i...   377   e-102
gb|EXB93216.1| Poly(rC)-binding protein 1 [Morus notabilis]           376   e-102
ref|XP_006664168.1| PREDICTED: poly(rC)-binding protein 2-like [...   376   e-101
ref|XP_006487775.1| PREDICTED: poly(rC)-binding protein 3-like i...   376   e-101
ref|XP_002319087.2| hypothetical protein POPTR_0013s04030g [Popu...   376   e-101
gb|EOY11034.1| RNA-binding KH domain-containing protein [Theobro...   376   e-101
ref|XP_006423978.1| hypothetical protein CICLE_v10028209mg [Citr...   375   e-101
ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus ...   373   e-101
ref|XP_003577794.1| PREDICTED: KH domain-containing protein At4g...   372   e-100
gb|ABF97725.1| KH domain containing protein, expressed [Oryza sa...   372   e-100

>gb|ABA99242.2| FLK, putative, expressed [Oryza sativa Japonica Group]
            gi|222617409|gb|EEE53541.1| hypothetical protein
            OsJ_36750 [Oryza sativa Japonica Group]
          Length = 517

 Score =  402 bits (1033), Expect = e-109
 Identities = 205/332 (61%), Positives = 251/332 (75%), Gaps = 14/332 (4%)
 Frame = -2

Query: 954  EHTVEEETSGDVGNSHDMKQEQDMQIEAESGEKRWPGWPGESVFRILIPSNKVGSLIGRK 775
            +H  ++    + G+++  + + + Q  A + EK+WPGWPGESVFRIL+P+ KVG++IGRK
Sbjct: 74   QHEEDQAIPSEEGHAYGGEAQGEQQANAVTDEKKWPGWPGESVFRILVPAQKVGAVIGRK 133

Query: 774  GEFIKKMCEESKARIKILDGPPGAPERTVMISAKEEPDASVSPAMDGLLRVHKRIIDGLD 595
            GEFIKKMCEES+ARIK+LDGPPG P+R VMISAK+EPDA + PA+DGLLRVHKRI DGLD
Sbjct: 134  GEFIKKMCEESRARIKVLDGPPGVPDRAVMISAKDEPDAPLPPAVDGLLRVHKRITDGLD 193

Query: 594  GESGLAPSAAGNTLPTRLLVAATQAGSLIGKHGATIKSIQESCSSIVRVVDNLPPVALPD 415
            GES     AAG   PTRLLV A+QAGSLIGK GATIKSIQ++   ++R+++++PPVAL D
Sbjct: 194  GESDQPQRAAGTVGPTRLLVPASQAGSLIGKQGATIKSIQDASKCVLRILESVPPVALSD 253

Query: 414  DRVVEIQGEPIGMHKAVELIAAHLRKFLVDRSVLPLFE-KRPLPNMHMEQNMPPPQ---- 250
            DRVVEIQGEP+ +HKAVELIA+HLRKFLVDRSVLPLFE +  + N H EQ MPPPQ    
Sbjct: 254  DRVVEIQGEPLDVHKAVELIASHLRKFLVDRSVLPLFEMQMKVHNAHREQPMPPPQTWGP 313

Query: 249  --PWGHSQGLPPGAGSAYGGNPQ-----XXDSFY-PPDLPPLEKQPHHGISMYGQNAPTA 94
              PWGH   +PPG G  YGGNPQ       D +Y PPD+PP+EKQPH+GIS YG++AP  
Sbjct: 314  PPPWGHPSNVPPG-GPGYGGNPQFMPPRPQDHYYPPPDVPPVEKQPHYGISSYGRDAPPT 372

Query: 93   GV-HSGANQQPQSMISQITQHMQILLSYADAV 1
            G   +  NQ P    SQIT  MQ+ LSYADAV
Sbjct: 373  GAPPASGNQHPPHGSSQITHSMQVPLSYADAV 404


>ref|XP_004982386.1| PREDICTED: poly(rC)-binding protein 3-like [Setaria italica]
          Length = 527

 Score =  399 bits (1026), Expect = e-109
 Identities = 210/318 (66%), Positives = 244/318 (76%), Gaps = 16/318 (5%)
 Frame = -2

Query: 906  DMKQEQDMQIEAESGEKRWPGWPGESVFRILIPSNKVGSLIGRKGEFIKKMCEESKARIK 727
            D  ++ + Q+  E  + RWPGWPGESVFRIL+P+ KVG++IGRKGEFIKKMCEESKARIK
Sbjct: 96   DTSRQDNSQVNVE--DNRWPGWPGESVFRILVPAQKVGAIIGRKGEFIKKMCEESKARIK 153

Query: 726  ILDGPPGAPERTVMISAKEEPDASVSPAMDGLLRVHKRIIDGLDGESGLAPSAAGNTLPT 547
            ILDGPPG PER VM+SAK+EPDA VSPAMDGLLRVHKRI D  DGESG    +AGN  PT
Sbjct: 154  ILDGPPGVPERAVMVSAKDEPDAPVSPAMDGLLRVHKRITDSSDGESGQPQRSAGNIGPT 213

Query: 546  RLLVAATQAGSLIGKHGATIKSIQESCSSIVRVVDNLPPVALPDDRVVEIQGEPIGMHKA 367
            RLLV A+QAGSLIGK GATIKSIQ+S  S+VR+V+N+PPVAL DDRVVEIQGEP+G+HKA
Sbjct: 214  RLLVPASQAGSLIGKQGATIKSIQDSSKSVVRIVENVPPVALNDDRVVEIQGEPLGVHKA 273

Query: 366  VELIAAHLRKFLVDRSVLPLFEKR-PLPNMHMEQNMP------PPQPWGHSQGLPPGAGS 208
            VELIA+HLRKFLVDRSVLPLFE    + +M  EQ MP      PPQPWG    LPPG G 
Sbjct: 274  VELIASHLRKFLVDRSVLPLFETHMKMHSMQREQPMPPPQHWGPPQPWGPPPNLPPG-GP 332

Query: 207  AYGGNPQ-----XXDSFY-PPDLP--PLEKQPHHGISMYGQNAPTAGVHSGANQQPQSMI 52
             +GGNPQ       D++Y PPD+P  P+EKQPH+GIS YG+  P +GV +  NQ P    
Sbjct: 333  GFGGNPQFMPPRPQDNYYPPPDVPPAPVEKQPHYGISAYGREVPPSGVSAAGNQPPSHAG 392

Query: 51   SQITQH-MQILLSYADAV 1
            SQ+T H M I L+YADAV
Sbjct: 393  SQVTTHNMHIPLAYADAV 410


>ref|XP_003562255.1| PREDICTED: poly(rC)-binding protein 1-like [Brachypodium distachyon]
          Length = 518

 Score =  399 bits (1026), Expect = e-109
 Identities = 210/341 (61%), Positives = 255/341 (74%), Gaps = 17/341 (4%)
 Frame = -2

Query: 972  LMDELVEHTVEEETSGDVGNSH----DMKQEQDMQIEAESGEKRWPGWPGESVFRILIPS 805
            L+ E  E+   EE +G     +    ++KQ+ ++Q+EA   +KRWPGWPG+SVFRIL+P 
Sbjct: 65   LLSEEPENQYNEEPAGPYQEENAFNGEVKQQDNLQVEAN--DKRWPGWPGDSVFRILVPV 122

Query: 804  NKVGSLIGRKGEFIKKMCEESKARIKILDGPPGAPERTVMISAKEEPDASVSPAMDGLLR 625
            +KVG++IGRKGEFIK+MCEESKARIKILDGPPG PER VMISAK+EPD  +SPAMDGLLR
Sbjct: 123  HKVGAIIGRKGEFIKRMCEESKARIKILDGPPGVPERAVMISAKDEPDEQISPAMDGLLR 182

Query: 624  VHKRIIDGLDGESGLAPSAAGNTLPTRLLVAATQAGSLIGKHGATIKSIQESCSSIVRVV 445
            +HKRI DG DGE G      G   PTRLLV A+QAGSLIGK GATIKSIQ+S  ++VR+V
Sbjct: 183  IHKRIADGSDGEFGQTQRGTGTMGPTRLLVPASQAGSLIGKQGATIKSIQDSSKAVVRIV 242

Query: 444  DNLPPVALPDDRVVEIQGEPIGMHKAVELIAAHLRKFLVDRSVLPLFEKR-PLPNMHMEQ 268
            +N+PPVAL DDRVVEIQGEP+ + KAVELIA+HLRKFLVD SVLPLFE++  + +M  EQ
Sbjct: 243  ENVPPVALNDDRVVEIQGEPLSVQKAVELIASHLRKFLVDHSVLPLFEQQMKMHSMPREQ 302

Query: 267  NMP------PPQPWGHSQGLPPGAGSAYGGNPQ-----XXDSFY-PPDLPPLEKQPHHGI 124
             MP      PPQPWG     PPG G  Y GNPQ       D++Y PPD+PP+EKQPH+GI
Sbjct: 303  PMPAPQQWGPPQPWGPPPNHPPG-GPGYAGNPQFMPPRPQDNYYPPPDVPPMEKQPHYGI 361

Query: 123  SMYGQNAPTAGVHSGANQQPQSMISQITQHMQILLSYADAV 1
            S YG+ AP +GV +  NQ P  + SQ+T +MQI LSYADAV
Sbjct: 362  SAYGREAP-SGVSASGNQPPSHVASQVTHNMQIPLSYADAV 401


>ref|NP_001050707.2| Os03g0627500 [Oryza sativa Japonica Group]
            gi|255674723|dbj|BAF12621.2| Os03g0627500, partial [Oryza
            sativa Japonica Group]
          Length = 512

 Score =  390 bits (1003), Expect = e-106
 Identities = 214/344 (62%), Positives = 251/344 (72%), Gaps = 20/344 (5%)
 Frame = -2

Query: 972  LMDELVEHTVEEETSG------DVGNSHDMKQEQDMQIEAESGEKRWPGWPGESVFRILI 811
            L  E  E+   EE S       D   + ++KQ+  + +EA+   K+WPGWPGESVFRILI
Sbjct: 60   LYSEEPENQYNEEPSNPYQEESDNAYNGEVKQQDSLPVEAD---KKWPGWPGESVFRILI 116

Query: 810  PSNKVGSLIGRKGEFIKKMCEESKARIKILDGPPGAPERTVMISAKEEPDASVSPAMDGL 631
            P+ KVG++IGRKGEFIKKMCEESKARIKILDGPPG PERTVMISAK+EPDA +SPAMDGL
Sbjct: 117  PAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAPISPAMDGL 176

Query: 630  LRVHKRIIDGLDGESGLAPSAAGNTLPTRLLVAATQAGSLIGKHGATIKSIQESCSSIVR 451
             RV+KRI DG DG+SG       N  PTRLLV A+QAGSLIGK GATIKSIQ+S  SIVR
Sbjct: 177  FRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQDSSKSIVR 236

Query: 450  VVDNLPPVALPDDRVVEIQGEPIGMHKAVELIAAHLRKFLVDRSVLPLFE-KRPLPNMHM 274
            +V+ LP VAL DDRVVEIQGEP+G+ KA+E IA+HLRKFLVDRSVLPLFE +  + N   
Sbjct: 237  IVETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKFLVDRSVLPLFEGQMKMHNAQR 296

Query: 273  EQNMPPPQPWGHSQ-------GLPPGAGSAYGGNPQ-----XXDSFY-PPDLPPLEKQPH 133
            EQ M  PQPWG  Q        LPPG G  YGG+PQ       D++Y PPD+P +EKQPH
Sbjct: 297  EQAMAAPQPWGPPQPWGPPPSHLPPG-GPGYGGHPQFMPPRPQDNYYPPPDVPSMEKQPH 355

Query: 132  HGISMYGQNAPTAGVHSGANQQPQSMISQITQHMQILLSYADAV 1
            +GIS YG+ APT GV +  NQ P  + SQ+T +MQI LSYADAV
Sbjct: 356  YGISAYGREAPT-GVSASGNQPPSHVASQVTHNMQIPLSYADAV 398


>gb|EEC75782.1| hypothetical protein OsI_12699 [Oryza sativa Indica Group]
          Length = 510

 Score =  390 bits (1003), Expect = e-106
 Identities = 214/344 (62%), Positives = 251/344 (72%), Gaps = 20/344 (5%)
 Frame = -2

Query: 972  LMDELVEHTVEEETSG------DVGNSHDMKQEQDMQIEAESGEKRWPGWPGESVFRILI 811
            L  E  E+   EE S       D   + ++KQ+  + +EA+   K+WPGWPGESVFRILI
Sbjct: 58   LYSEEPENQYNEEPSNPYQEELDNAYNGEVKQQDSLPVEAD---KKWPGWPGESVFRILI 114

Query: 810  PSNKVGSLIGRKGEFIKKMCEESKARIKILDGPPGAPERTVMISAKEEPDASVSPAMDGL 631
            P+ KVG++IGRKGEFIKKMCEESKARIKILDGPPG PERTVMISAK+EPDA +SPAMDGL
Sbjct: 115  PAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAPISPAMDGL 174

Query: 630  LRVHKRIIDGLDGESGLAPSAAGNTLPTRLLVAATQAGSLIGKHGATIKSIQESCSSIVR 451
             RV+KRI DG DG+SG       N  PTRLLV A+QAGSLIGK GATIKSIQ+S  SIVR
Sbjct: 175  FRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQDSSKSIVR 234

Query: 450  VVDNLPPVALPDDRVVEIQGEPIGMHKAVELIAAHLRKFLVDRSVLPLFE-KRPLPNMHM 274
            +V+ LP VAL DDRVVEIQGEP+G+ KA+E IA+HLRKFLVDRSVLPLFE +  + N   
Sbjct: 235  IVETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKFLVDRSVLPLFEGQMKMHNAQR 294

Query: 273  EQNMPPPQPWGHSQ-------GLPPGAGSAYGGNPQ-----XXDSFY-PPDLPPLEKQPH 133
            EQ M  PQPWG  Q        LPPG G  YGG+PQ       D++Y PPD+P +EKQPH
Sbjct: 295  EQAMAAPQPWGPPQPWGPPPSHLPPG-GPGYGGHPQFMPPRPQDNYYPPPDVPSMEKQPH 353

Query: 132  HGISMYGQNAPTAGVHSGANQQPQSMISQITQHMQILLSYADAV 1
            +GIS YG+ APT GV +  NQ P  + SQ+T +MQI LSYADAV
Sbjct: 354  YGISAYGREAPT-GVSASGNQPPSHVASQVTHNMQIPLSYADAV 396


>gb|AAL31692.1|AC092390_13 putative RNA binding protein [Oryza sativa Japonica Group]
            gi|108709929|gb|ABF97724.1| KH domain containing protein,
            expressed [Oryza sativa Japonica Group]
            gi|215695360|dbj|BAG90551.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|222625405|gb|EEE59537.1|
            hypothetical protein OsJ_11804 [Oryza sativa Japonica
            Group]
          Length = 510

 Score =  390 bits (1003), Expect = e-106
 Identities = 214/344 (62%), Positives = 251/344 (72%), Gaps = 20/344 (5%)
 Frame = -2

Query: 972  LMDELVEHTVEEETSG------DVGNSHDMKQEQDMQIEAESGEKRWPGWPGESVFRILI 811
            L  E  E+   EE S       D   + ++KQ+  + +EA+   K+WPGWPGESVFRILI
Sbjct: 58   LYSEEPENQYNEEPSNPYQEESDNAYNGEVKQQDSLPVEAD---KKWPGWPGESVFRILI 114

Query: 810  PSNKVGSLIGRKGEFIKKMCEESKARIKILDGPPGAPERTVMISAKEEPDASVSPAMDGL 631
            P+ KVG++IGRKGEFIKKMCEESKARIKILDGPPG PERTVMISAK+EPDA +SPAMDGL
Sbjct: 115  PAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAPISPAMDGL 174

Query: 630  LRVHKRIIDGLDGESGLAPSAAGNTLPTRLLVAATQAGSLIGKHGATIKSIQESCSSIVR 451
             RV+KRI DG DG+SG       N  PTRLLV A+QAGSLIGK GATIKSIQ+S  SIVR
Sbjct: 175  FRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQDSSKSIVR 234

Query: 450  VVDNLPPVALPDDRVVEIQGEPIGMHKAVELIAAHLRKFLVDRSVLPLFE-KRPLPNMHM 274
            +V+ LP VAL DDRVVEIQGEP+G+ KA+E IA+HLRKFLVDRSVLPLFE +  + N   
Sbjct: 235  IVETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKFLVDRSVLPLFEGQMKMHNAQR 294

Query: 273  EQNMPPPQPWGHSQ-------GLPPGAGSAYGGNPQ-----XXDSFY-PPDLPPLEKQPH 133
            EQ M  PQPWG  Q        LPPG G  YGG+PQ       D++Y PPD+P +EKQPH
Sbjct: 295  EQAMAAPQPWGPPQPWGPPPSHLPPG-GPGYGGHPQFMPPRPQDNYYPPPDVPSMEKQPH 353

Query: 132  HGISMYGQNAPTAGVHSGANQQPQSMISQITQHMQILLSYADAV 1
            +GIS YG+ APT GV +  NQ P  + SQ+T +MQI LSYADAV
Sbjct: 354  YGISAYGREAPT-GVSASGNQPPSHVASQVTHNMQIPLSYADAV 396


>ref|XP_002466785.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
            gi|241920639|gb|EER93783.1| hypothetical protein
            SORBIDRAFT_01g014200 [Sorghum bicolor]
          Length = 430

 Score =  388 bits (996), Expect = e-105
 Identities = 204/330 (61%), Positives = 244/330 (73%), Gaps = 13/330 (3%)
 Frame = -2

Query: 951  HTVEEETSGDVGNSHDMKQEQDMQIEAESGEKRWPGWPGESVFRILIPSNKVGSLIGRKG 772
            ++ +EE         DM Q+ + Q+     +K WPGWPGESVFRIL+P+ KVG++IGRKG
Sbjct: 82   NSYQEELENAFSGDPDMAQKDNSQVNNVDDDK-WPGWPGESVFRILVPAQKVGAIIGRKG 140

Query: 771  EFIKKMCEESKARIKILDGPPGAPERTVMISAKEEPDASVSPAMDGLLRVHKRIIDGLDG 592
            EFIKKMCEE+KARIKILDGPPG PER VMISAK+EPDA +SPA+DGLLRVHKRI D  +G
Sbjct: 141  EFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAPLSPAVDGLLRVHKRITDSSNG 200

Query: 591  ESGLAPSAAGNTLPTRLLVAATQAGSLIGKHGATIKSIQESCSSIVRVVDNLPPVALPDD 412
            ESG    +AGN  PTRLLV ++QAGSLIGK GATIKSIQ+S  S+VR+V+N+PPVAL DD
Sbjct: 201  ESGQLQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQDSSKSVVRIVENVPPVALNDD 260

Query: 411  RVVEIQGEPIGMHKAVELIAAHLRKFLVDRSVLPLFEKR-PLPNMHMEQNMPPPQPWGHS 235
            RVVEIQGEP+G+ KAVELIA+HLRKFLVDRSVLPLFE    +  M  EQ +PPPQ WG  
Sbjct: 261  RVVEIQGEPLGVQKAVELIASHLRKFLVDRSVLPLFETHMKMHGMPREQPVPPPQHWGPP 320

Query: 234  Q------GLPPGAGSAYGGNPQ-----XXDSFYP-PDLPPLEKQPHHGISMYGQNAPTAG 91
            Q       +PPG G  +GGNPQ       DS+YP PD P +EKQPH+GIS YG+ AP +G
Sbjct: 321  QTWGPPPNIPPG-GPGFGGNPQFIPPRPQDSYYPTPDAPAMEKQPHYGISAYGREAPPSG 379

Query: 90   VHSGANQQPQSMISQITQHMQILLSYADAV 1
              +  NQ      SQ+T +M I L+YADAV
Sbjct: 380  ASATGNQPLSHAGSQVTHNMHIPLNYADAV 409


>gb|AFW68178.1| nucleic acid binding protein [Zea mays]
          Length = 637

 Score =  384 bits (985), Expect = e-104
 Identities = 200/317 (63%), Positives = 239/317 (75%), Gaps = 13/317 (4%)
 Frame = -2

Query: 912  SHDMKQEQDMQIEAESGEKRWPGWPGESVFRILIPSNKVGSLIGRKGEFIKKMCEESKAR 733
            S  + Q+ ++Q+     + +WPGWPGESVFRIL+P+ KVG++IGRKGEFIKKMCEE+KAR
Sbjct: 205  SGGINQQDNLQVN-NVDDNKWPGWPGESVFRILVPAQKVGAIIGRKGEFIKKMCEETKAR 263

Query: 732  IKILDGPPGAPERTVMISAKEEPDASVSPAMDGLLRVHKRIIDGLDGESGLAPSAAGNTL 553
            IKILDGPPG PER VMISAK+EPDA +SPAMDGLLRVHKRI D  DGES     +AGN  
Sbjct: 264  IKILDGPPGVPERAVMISAKDEPDAPLSPAMDGLLRVHKRITDSSDGESSQPQRSAGNIG 323

Query: 552  PTRLLVAATQAGSLIGKHGATIKSIQESCSSIVRVVDNLPPVALPDDRVVEIQGEPIGMH 373
            PTRLLV ++QAGSLIGK GATIKSIQ+S  SIVR+V+N+PPVAL DDRVVEIQGEP+G+ 
Sbjct: 324  PTRLLVPSSQAGSLIGKQGATIKSIQDSSKSIVRIVENVPPVALNDDRVVEIQGEPLGVQ 383

Query: 372  KAVELIAAHLRKFLVDRSVLPLFEKR-PLPNMHMEQNMPPPQPWGHSQ------GLPPGA 214
            +AVELI++HLRKFLVDRSVLPLFE    +  M  EQ +PPPQ WG  Q       +PPG 
Sbjct: 384  EAVELISSHLRKFLVDRSVLPLFEAHMKMHGMPREQPVPPPQHWGPPQTWIRPPNIPPG- 442

Query: 213  GSAYGGNPQ-----XXDSFYP-PDLPPLEKQPHHGISMYGQNAPTAGVHSGANQQPQSMI 52
            G  +GGNPQ       DS+YP PD+P +EKQPH+GIS YG+ AP +G  +  NQ P    
Sbjct: 443  GPGFGGNPQFMHPRPQDSYYPSPDVPHMEKQPHYGISAYGREAPPSGASATGNQPPSHAG 502

Query: 51   SQITQHMQILLSYADAV 1
            SQ+   M I L+YADAV
Sbjct: 503  SQVAHDMHIPLAYADAV 519


>dbj|BAK02991.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 513

 Score =  382 bits (981), Expect = e-103
 Identities = 201/314 (64%), Positives = 242/314 (77%), Gaps = 13/314 (4%)
 Frame = -2

Query: 903  MKQEQDMQIEAESGEKRWPGWPGESVFRILIPSNKVGSLIGRKGEFIKKMCEESKARIKI 724
            +KQ++ +Q+E E  +KRWPGWPG+SVFRIL+P+ KVG++IGRKGEFIKKMCE+SKARIKI
Sbjct: 92   VKQQESLQVEGE--DKRWPGWPGDSVFRILVPAQKVGAIIGRKGEFIKKMCEQSKARIKI 149

Query: 723  LDGPPGAPERTVMISAKEEPDASVSPAMDGLLRVHKRIIDGLDGESGLAPSAAGNTLPTR 544
            LDGPPG  ER V+ISAK+EPD  +SPAMDGLLR+HKRI DG DGE G     A N  PTR
Sbjct: 150  LDGPPGVTERAVIISAKDEPDEPISPAMDGLLRIHKRITDGSDGEFGQPQRGASNVGPTR 209

Query: 543  LLVAATQAGSLIGKHGATIKSIQESCSSIVRVVDNLPPVALPDDRVVEIQGEPIGMHKAV 364
            LLV A+QAGSLIGK GATIKSIQ+S  S+VR+V+N+PPVAL DDRVVEIQGEP+G+HKAV
Sbjct: 210  LLVPASQAGSLIGKQGATIKSIQDSSKSVVRIVENVPPVALNDDRVVEIQGEPLGVHKAV 269

Query: 363  ELIAAHLRKFLVDRSVLPLFEKR-PLPNMHMEQNMPPPQPWGHSQ------GLPPGAGSA 205
            ELIA HLRKFLVD SVLPLFE++  + ++  EQ M  PQ W  +Q       LPP  G  
Sbjct: 270  ELIANHLRKFLVDHSVLPLFEQQMKMHSVQREQPMTAPQHWTPTQPWLPPPNLPP-VGPG 328

Query: 204  YGGNPQ-----XXDSFYP-PDLPPLEKQPHHGISMYGQNAPTAGVHSGANQQPQSMISQI 43
            YGGNPQ       D++YP PD+PP+EKQPH+GIS YG+ AP +G  +  NQ P  + SQ+
Sbjct: 329  YGGNPQFMPPRPQDNYYPRPDVPPMEKQPHYGISAYGREAPPSG--TSGNQPPLHVASQV 386

Query: 42   TQHMQILLSYADAV 1
              +MQI LSYADAV
Sbjct: 387  -HNMQIPLSYADAV 399


>ref|NP_001151605.1| nucleic acid binding protein [Zea mays] gi|195648058|gb|ACG43497.1|
            nucleic acid binding protein [Zea mays]
          Length = 524

 Score =  379 bits (974), Expect = e-103
 Identities = 200/316 (63%), Positives = 236/316 (74%), Gaps = 12/316 (3%)
 Frame = -2

Query: 912  SHDMKQEQDMQIEAESGEKRWPGWPGESVFRILIPSNKVGSLIGRKGEFIKKMCEESKAR 733
            S  + Q+ ++Q+     +  WPGWPGESVFRIL+P+ KVG++IGRKGEFIKKMCEE+KAR
Sbjct: 95   SGGINQQGNLQVN-NVDDNIWPGWPGESVFRILVPAQKVGAIIGRKGEFIKKMCEETKAR 153

Query: 732  IKILDGPPGAPERTVMISAKEEPDASVSPAMDGLLRVHKRIIDGLDGESGLAPSAAGNTL 553
            IKILDGPPG PER VMISAK+EPDA +SPAMDGLLRVHKRI D  DGES     +AGN  
Sbjct: 154  IKILDGPPGVPERAVMISAKDEPDAPLSPAMDGLLRVHKRITDSSDGESSQPQRSAGNIG 213

Query: 552  PTRLLVAATQAGSLIGKHGATIKSIQESCSSIVRVVDNLPPVALPDDRVVEIQGEPIGMH 373
            PTRLLV ++QAGSLIGK GATIKSIQ+S  SIVR+V+N+PPVAL DDRVVEIQGEP+G+ 
Sbjct: 214  PTRLLVPSSQAGSLIGKQGATIKSIQDSSKSIVRIVENVPPVALNDDRVVEIQGEPLGVQ 273

Query: 372  KAVELIAAHLRKFLVDRSVLPLFEKR-PLPNMHMEQNMPPPQPWGHSQ------GLPPGA 214
            KAVELI++HLRKFLVDRSVLPLFE    +  M  EQ +PPPQ WG  Q       +PPG 
Sbjct: 274  KAVELISSHLRKFLVDRSVLPLFEAHMKMHGMPREQPVPPPQHWGPPQTWIRPPNIPPG- 332

Query: 213  GSAYGGNPQ-----XXDSFYPPDLPPLEKQPHHGISMYGQNAPTAGVHSGANQQPQSMIS 49
            G  +GGNPQ       DS+YPP  P +EKQPH+GIS YG+ AP +G  +  NQ P    S
Sbjct: 333  GPGFGGNPQFMPPRPQDSYYPP--PDVEKQPHYGISAYGREAPPSGASATGNQPPSHAGS 390

Query: 48   QITQHMQILLSYADAV 1
            Q+   M I L+YADAV
Sbjct: 391  QVAHDMHIPLAYADAV 406


>ref|XP_006487774.1| PREDICTED: poly(rC)-binding protein 3-like isoform X1 [Citrus
            sinensis]
          Length = 521

 Score =  377 bits (967), Expect = e-102
 Identities = 199/333 (59%), Positives = 247/333 (74%), Gaps = 15/333 (4%)
 Frame = -2

Query: 954  EHTVEEETSGDV---GNSHDMKQEQDMQIEAESGEKRWPGWPGESVFRILIPSNKVGSLI 784
            +H  E++   D+    +    KQE ++ +   S EK+WPGWPGESVFR+L+P+ KVGS+I
Sbjct: 86   DHVPEDQVPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSII 145

Query: 783  GRKGEFIKKMCEESKARIKILDGPPGAPERTVMISAKEEPDASVSPAMDGLLRVHKRIID 604
            GRKGEFIKK+ EE++ARIKILDGPPG  ER VMISAKEEP++S+ PAMDGLLRVHKRI+D
Sbjct: 146  GRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVD 205

Query: 603  GLDGESGLAPSAAGNTLPTRLLVAATQAGSLIGKHGATIKSIQESCSSIVRVV--DNLPP 430
            GLD +S  APS  G  + T+LLV A+QAGSLIGK G T+KSIQE+ + IVRV+  ++LP 
Sbjct: 206  GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPV 265

Query: 429  VALPDDRVVEIQGEPIGMHKAVELIAAHLRKFLVDRSVLPLFEKR-PLPNMHMEQNMPPP 253
             AL DDRVVE+ G+  G+HKA+ELI +HLRKFLVDRS++PLFE    +PN  M+ ++PPP
Sbjct: 266  FALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMD-HIPPP 324

Query: 252  QPWGHSQGLPPGAGSAYGGNPQ------XXDSFYPP-DL-PPLEKQPHHGISMYGQNAPT 97
            Q WG  QGLPP  G  YG NPQ        +S+YPP DL PP+EKQPH GIS YG+ AP 
Sbjct: 325  QSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAP- 383

Query: 96   AGVHSGAN-QQPQSMISQITQHMQILLSYADAV 1
              VH  +N Q   SMI+Q+TQ MQI LSYADAV
Sbjct: 384  VNVHGSSNAQSTPSMITQVTQQMQIPLSYADAV 416


>gb|EXB93216.1| Poly(rC)-binding protein 1 [Morus notabilis]
          Length = 462

 Score =  376 bits (966), Expect = e-102
 Identities = 201/309 (65%), Positives = 239/309 (77%), Gaps = 20/309 (6%)
 Frame = -2

Query: 867 SGEKRWPGWPGESVFRILIPSNKVGSLIGRKGEFIKKMCEESKARIKILDGPPGAPERTV 688
           + EK+WPGWPGESVFR+L+P+ KVGS+IGRKGEFIKK+ EE++ARIKILDGPPG  ER V
Sbjct: 58  AAEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAV 117

Query: 687 MISAKEEPDASVSPAMDGLLRVHKRIIDGLDGESGLAPSAAGNTLPTRLLVAATQAGSLI 508
           M+SAKEEPD+S+ PAMDGLLRVHKRI+DGLDG+S  AP  AG  + TRLLVAA+QAGSLI
Sbjct: 118 MVSAKEEPDSSLPPAMDGLLRVHKRIVDGLDGDSSHAPPPAGAKVSTRLLVAASQAGSLI 177

Query: 507 GKHGATIKSIQESCSSIVRVV--DNLPPVALPDDRVVEIQGEPIGMHKAVELIAAHLRKF 334
           GK G T+KSIQES + IVRV+  ++LP  AL DDRVVE+ GEP G+HKAVELIA+HLRKF
Sbjct: 178 GKQGGTVKSIQESSNCIVRVLGSEDLPIFALQDDRVVEVVGEPAGVHKAVELIASHLRKF 237

Query: 333 LVDRSVLPLFEKRPLPNMHME------QNMPPPQPWGHSQGLPP--GAGSAYGGNPQ--- 187
           LVDRS++P+FE      MHM+       +MPPPQ WG  QG+PP  G G  +G NPQ   
Sbjct: 238 LVDRSIIPVFE------MHMQMANPQMDHMPPPQSWGPPQGVPPNAGGGPGFGHNPQYMP 291

Query: 186 ----XXDSFYPP-DL-PPLEKQPHHGISMYGQNAPTAGVHSGANQQ-PQSMISQITQHMQ 28
                 DS+YPP DL PP++KQPHHGI  YG+ AP  GVH+ AN Q   SM++QITQ MQ
Sbjct: 292 PPPRQMDSYYPPADLPPPIDKQPHHGILAYGREAP-MGVHAPANAQGAPSMVTQITQQMQ 350

Query: 27  ILLSYADAV 1
           I LSYADAV
Sbjct: 351 IPLSYADAV 359


>ref|XP_006664168.1| PREDICTED: poly(rC)-binding protein 2-like [Oryza brachyantha]
          Length = 505

 Score =  376 bits (965), Expect = e-101
 Identities = 197/310 (63%), Positives = 235/310 (75%), Gaps = 14/310 (4%)
 Frame = -2

Query: 888  DMQIEAESGEKRWPGWPGESVFRILIPSNKVGSLIGRKGEFIKKMCEESKARIKILDGPP 709
            + Q  AE+ +K+WPGWPGESVFRIL+ + KVG++IGRKGEFIKKMCEES+ARIK+LDGPP
Sbjct: 86   EQQGNAENDDKKWPGWPGESVFRILVAAQKVGAVIGRKGEFIKKMCEESRARIKVLDGPP 145

Query: 708  GAPERTVMISAKEEPDASVSPAMDGLLRVHKRIIDGLDGESGLAPSAAGNTLPTRLLVAA 529
            G P+R VMISAK+EPDA V PA+DGLLRVHKRI DGLD E    P  A    PTRLLV A
Sbjct: 146  GVPDRAVMISAKDEPDALVPPAVDGLLRVHKRITDGLDVEPD-QPQRAAAGGPTRLLVPA 204

Query: 528  TQAGSLIGKHGATIKSIQESCSSIVRVVDNLPPVALPDDRVVEIQGEPIGMHKAVELIAA 349
            +QAGSLIGK GATIKSIQ++   ++R+++++PPVAL DDRVVEIQGEP  +HKAVELIA+
Sbjct: 205  SQAGSLIGKQGATIKSIQDASKCVLRILESVPPVALSDDRVVEIQGEPTDVHKAVELIAS 264

Query: 348  HLRKFLVDRSVLPLFE-KRPLPNMHMEQNMPPPQ------PWGHSQGLPPGAGSAYGGNP 190
            HLRKFLVDRSVLPLFE +  + + H EQ MPPPQ      PWGH   LPPG G  Y GNP
Sbjct: 265  HLRKFLVDRSVLPLFEMQMKVHSAHREQPMPPPQTWGPPPPWGHPSNLPPG-GPGYAGNP 323

Query: 189  Q-----XXDSFY-PPDLPPLEKQPHHGISMYGQNAPTAGV-HSGANQQPQSMISQITQHM 31
            Q       D +Y PPD+PP+EKQPH+GIS YG++AP +G   +  NQ      SQ+T  M
Sbjct: 324  QFMPPRPQDHYYPPPDVPPVEKQPHYGISSYGRDAPPSGAPPASGNQHTPHGSSQVTHSM 383

Query: 30   QILLSYADAV 1
            Q+ LSYADAV
Sbjct: 384  QVPLSYADAV 393


>ref|XP_006487775.1| PREDICTED: poly(rC)-binding protein 3-like isoform X2 [Citrus
            sinensis]
          Length = 520

 Score =  376 bits (965), Expect = e-101
 Identities = 199/332 (59%), Positives = 246/332 (74%), Gaps = 14/332 (4%)
 Frame = -2

Query: 954  EHTVEEETSGDV---GNSHDMKQEQDMQIEAESGEKRWPGWPGESVFRILIPSNKVGSLI 784
            +H  E++   D+    +    KQE ++ +   S EK+WPGWPGESVFR+L+P+ KVGS+I
Sbjct: 86   DHVPEDQVPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSII 145

Query: 783  GRKGEFIKKMCEESKARIKILDGPPGAPERTVMISAKEEPDASVSPAMDGLLRVHKRIID 604
            GRKGEFIKK+ EE++ARIKILDGPPG  ER VMISAKEEP++S+ PAMDGLLRVHKRI+D
Sbjct: 146  GRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVD 205

Query: 603  GLDGESGLAPSAAGNTLPTRLLVAATQAGSLIGKHGATIKSIQESCSSIVRVVD-NLPPV 427
            GLD +S  APS  G  + T+LLV A+QAGSLIGK G T+KSIQE+ + IVRV+  +LP  
Sbjct: 206  GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGADLPVF 265

Query: 426  ALPDDRVVEIQGEPIGMHKAVELIAAHLRKFLVDRSVLPLFEKR-PLPNMHMEQNMPPPQ 250
            AL DDRVVE+ G+  G+HKA+ELI +HLRKFLVDRS++PLFE    +PN  M+ ++PPPQ
Sbjct: 266  ALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMD-HIPPPQ 324

Query: 249  PWGHSQGLPPGAGSAYGGNPQ------XXDSFYPP-DL-PPLEKQPHHGISMYGQNAPTA 94
             WG  QGLPP  G  YG NPQ        +S+YPP DL PP+EKQPH GIS YG+ AP  
Sbjct: 325  SWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAP-V 383

Query: 93   GVHSGAN-QQPQSMISQITQHMQILLSYADAV 1
             VH  +N Q   SMI+Q+TQ MQI LSYADAV
Sbjct: 384  NVHGSSNAQSTPSMITQVTQQMQIPLSYADAV 415


>ref|XP_002319087.2| hypothetical protein POPTR_0013s04030g [Populus trichocarpa]
            gi|550324911|gb|EEE95010.2| hypothetical protein
            POPTR_0013s04030g [Populus trichocarpa]
          Length = 527

 Score =  376 bits (965), Expect = e-101
 Identities = 208/345 (60%), Positives = 249/345 (72%), Gaps = 22/345 (6%)
 Frame = -2

Query: 969  MDELVEHTVEEETSGDVGNSHDM--------KQEQDMQIEAESGEKRWPGWPGESVFRIL 814
            +D  ++H V+   + D+ N+ D         KQ  D    +  GEKRWPGWPGESVFR+L
Sbjct: 78   VDPSIDHDVDHPVNHDMDNAIDQVPENNEASKQGHDEDTVSGGGEKRWPGWPGESVFRML 137

Query: 813  IPSNKVGSLIGRKGEFIKKMCEESKARIKILDGPPGAPERTVMISAKEEPDASVSPAMDG 634
            +P+ KVGS+IGRKGEFIKK+ EE++ARIKILDGPPG  ER VM+SAKEEPD+S+ PAMDG
Sbjct: 138  VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSSLPPAMDG 197

Query: 633  LLRVHKRIIDGLDGESGLAPSAAGNTLPTRLLVAATQAGSLIGKHGATIKSIQESCSSIV 454
            LLRVHKRIIDGLD +S   P  +G  + TRLLV A+QAGSLIGK G T+KSIQE+ + IV
Sbjct: 198  LLRVHKRIIDGLDSDSSNTPPTSGAKVSTRLLVPASQAGSLIGKQGGTVKSIQEASTCIV 257

Query: 453  RVV--DNLPPVALPDDRVVEIQGEPIGMHKAVELIAAHLRKFLVDRSVLPLFE-KRPLPN 283
            RV+  ++LP  AL DDRVVE+ GE  G+HKAVELIA+HLRKFLVDRS++PLFE +  + N
Sbjct: 258  RVLGAEDLPVFALQDDRVVEVLGEAAGVHKAVELIASHLRKFLVDRSIIPLFEMQMQMSN 317

Query: 282  MHMEQNMPPPQPWGHSQGLPP--GAGSAYGGNPQ------XXDSFYPP-DLPPL-EKQPH 133
              MEQ MPP Q WG  Q LPP  G G  YG NPQ        D +YPP D+PPL EKQPH
Sbjct: 318  PSMEQ-MPPHQSWGPPQPLPPNHGGGPGYGQNPQYMPPPRQLDDYYPPADMPPLMEKQPH 376

Query: 132  HGISMYGQNAPTAGVHSGAN-QQPQSMISQITQHMQILLSYADAV 1
             GIS YG+ AP  G H+ +N Q   SMI+QITQ MQI LSYADAV
Sbjct: 377  QGISAYGREAP-MGSHASSNAQAAPSMITQITQQMQIPLSYADAV 420


>gb|EOY11034.1| RNA-binding KH domain-containing protein [Theobroma cacao]
          Length = 499

 Score =  376 bits (965), Expect = e-101
 Identities = 200/336 (59%), Positives = 247/336 (73%), Gaps = 13/336 (3%)
 Frame = -2

Query: 969  MDELVEHTVEEETSGDVGNSHDMKQEQDMQIEAESGEKRWPGWPGESVFRILIPSNKVGS 790
            ++E  E  +EE+      + H  KQE + +      EK+WPGWPGESVFR+L+P+ KVGS
Sbjct: 58   LEENAEENLEEQNLQQE-SPHQPKQEHEDEAVVGGVEKKWPGWPGESVFRMLVPAQKVGS 116

Query: 789  LIGRKGEFIKKMCEESKARIKILDGPPGAPERTVMISAKEEPDASVSPAMDGLLRVHKRI 610
            +IGRKGEFIKK+ EE++ARIKILDGPPG  ER VM+SAKEEPD+S+ PAMDGLLRVHKRI
Sbjct: 117  IIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSSLPPAMDGLLRVHKRI 176

Query: 609  IDGLDGESGLAPSAAGNTLPTRLLVAATQAGSLIGKHGATIKSIQESCSSIVRVV--DNL 436
            +DGLDG+S  AP+A G  + TRLLV A+QAGSLIGK G T+KSIQES   +VRV+  ++L
Sbjct: 177  VDGLDGDSSHAPTAVGTKVSTRLLVPASQAGSLIGKQGTTVKSIQESSGCVVRVLGAEDL 236

Query: 435  PPVALPDDRVVEIQGEPIGMHKAVELIAAHLRKFLVDRSVLPLFEKRPLPNMHMEQNMPP 256
            P  AL DDRVVE+ GE  G+HKAVELIA+HLRKFLVDRS++PLFE     +     +MPP
Sbjct: 237  PVFALQDDRVVEVVGEAAGVHKAVELIASHLRKFLVDRSIIPLFEMHMQMSNPQMDHMPP 296

Query: 255  PQPWGHSQGLPPGA--GSAYGGNPQ------XXDSFYPP-DL-PPLEKQPHHGISMYGQN 106
             Q WG  QG+PP A  G+ +G NPQ        D++YPP D+ PP+EKQPH GIS YG+ 
Sbjct: 297  HQSWGPPQGVPPNASGGAGFGHNPQYMPPPRQLDNYYPPADMPPPIEKQPHQGISAYGRE 356

Query: 105  APTAGVHSGAN-QQPQSMISQITQHMQILLSYADAV 1
            AP  G H+ +N Q   SMI+Q+TQ MQI LSYADAV
Sbjct: 357  AP-MGAHASSNPQSAPSMITQVTQQMQIPLSYADAV 391


>ref|XP_006423978.1| hypothetical protein CICLE_v10028209mg [Citrus clementina]
            gi|557525912|gb|ESR37218.1| hypothetical protein
            CICLE_v10028209mg [Citrus clementina]
          Length = 521

 Score =  375 bits (964), Expect = e-101
 Identities = 198/333 (59%), Positives = 247/333 (74%), Gaps = 15/333 (4%)
 Frame = -2

Query: 954  EHTVEEETSGDV---GNSHDMKQEQDMQIEAESGEKRWPGWPGESVFRILIPSNKVGSLI 784
            +H  +++   D+    +    KQE ++ +   S EK+WPGWPGESVFR+L+P+ KVGS+I
Sbjct: 86   DHVPDDQVPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESVFRMLVPAQKVGSII 145

Query: 783  GRKGEFIKKMCEESKARIKILDGPPGAPERTVMISAKEEPDASVSPAMDGLLRVHKRIID 604
            GRKGEFIKK+ EE++ARIKILDGPPG  ER VMISAKEEP++S+ PAMDGLLRVHKRI+D
Sbjct: 146  GRKGEFIKKIVEETRARIKILDGPPGTTERAVMISAKEEPESSLPPAMDGLLRVHKRIVD 205

Query: 603  GLDGESGLAPSAAGNTLPTRLLVAATQAGSLIGKHGATIKSIQESCSSIVRVV--DNLPP 430
            GLD +S  APS  G  + T+LLV A+QAGSLIGK G T+KSIQE+ + IVRV+  ++LP 
Sbjct: 206  GLDSDSSHAPSGTGGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPV 265

Query: 429  VALPDDRVVEIQGEPIGMHKAVELIAAHLRKFLVDRSVLPLFEKR-PLPNMHMEQNMPPP 253
             AL DDRVVE+ G+  G+HKA+ELI +HLRKFLVDRS++PLFE    +PN  M+ ++PPP
Sbjct: 266  FALQDDRVVEVVGDASGVHKAMELIGSHLRKFLVDRSIIPLFEMHMQMPNPQMD-HIPPP 324

Query: 252  QPWGHSQGLPPGAGSAYGGNPQ------XXDSFYPP-DL-PPLEKQPHHGISMYGQNAPT 97
            Q WG  QGLPP  G  YG NPQ        +S+YPP DL PP+EKQPH GIS YG+ AP 
Sbjct: 325  QSWGPPQGLPPSGGPGYGHNPQYMPPPRQAESYYPPADLPPPMEKQPHQGISAYGREAP- 383

Query: 96   AGVHSGAN-QQPQSMISQITQHMQILLSYADAV 1
              VH  +N Q   SMI+Q+TQ MQI LSYADAV
Sbjct: 384  VNVHGSSNAQSTPSMITQVTQQMQIPLSYADAV 416


>ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
            gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein,
            putative [Ricinus communis]
          Length = 548

 Score =  373 bits (957), Expect = e-101
 Identities = 199/336 (59%), Positives = 246/336 (73%), Gaps = 13/336 (3%)
 Frame = -2

Query: 969  MDELVEHTVEEETSGDVGNSHDMKQEQDMQIEAESGEKRWPGWPGESVFRILIPSNKVGS 790
            +D ++EH ++  T     N    ++  D    +   EK+WPGWPGESVFR+L+P+ KVGS
Sbjct: 106  VDSVIEHDIDHATDQVPENYQAQEKGHDADTVSGGIEKKWPGWPGESVFRMLVPAQKVGS 165

Query: 789  LIGRKGEFIKKMCEESKARIKILDGPPGAPERTVMISAKEEPDASVSPAMDGLLRVHKRI 610
            +IGRKGEFIKK+ EE++ARIKILDGPPG  ER VM+SAKEEPD+++ PAMDGLLRVHKRI
Sbjct: 166  IIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSALPPAMDGLLRVHKRI 225

Query: 609  IDGLDGESGLAPSAAGNTLPTRLLVAATQAGSLIGKHGATIKSIQESCSSIVRVV--DNL 436
            +DGLDG+S  A S  G  + TRLLV A+QAGSLIGK G T+KSIQE+ S +VRV+  ++L
Sbjct: 226  VDGLDGDSSHASSGTGTKVSTRLLVPASQAGSLIGKQGGTVKSIQEASSCVVRVLGAEDL 285

Query: 435  PPVALPDDRVVEIQGEPIGMHKAVELIAAHLRKFLVDRSVLPLFEKR-PLPNMHMEQNMP 259
            P  AL DDRVVE+ G+  G+HKAVELIA+HLRKFLVDRS++PLFE    + N    ++MP
Sbjct: 286  PVFALQDDRVVEVLGDAAGVHKAVELIASHLRKFLVDRSIIPLFEMHMQMQNPPHMEHMP 345

Query: 258  PPQPWGHSQGLPPGAGSAYG-GNPQ------XXDSFYPP-DL-PPLEKQPHHGISMYGQN 106
            P Q WG  QG+PP AG   G GNPQ        +++YPP DL PP+EKQPH GIS YG+ 
Sbjct: 346  PHQSWGPPQGIPPNAGGGPGYGNPQYMPPPRQIENYYPPADLPPPMEKQPHQGISAYGRE 405

Query: 105  APTAGVHSGANQQ-PQSMISQITQHMQILLSYADAV 1
            AP  GVH  +N Q   SMI+QITQ MQI LSYADAV
Sbjct: 406  AP-MGVHGSSNSQAAPSMITQITQQMQIPLSYADAV 440


>ref|XP_003577794.1| PREDICTED: KH domain-containing protein At4g18375-like [Brachypodium
            distachyon]
          Length = 527

 Score =  372 bits (955), Expect = e-100
 Identities = 196/312 (62%), Positives = 234/312 (75%), Gaps = 14/312 (4%)
 Frame = -2

Query: 894  EQDMQIEAESGEKRWPGWPGESVFRILIPSNKVGSLIGRKGEFIKKMCEESKARIKILDG 715
            E +     E+ +K+WPGWPGESVFR+L+P  KVG++IGRKGEFIKKMCEES+ARIKILDG
Sbjct: 105  EAEQLANVETEDKKWPGWPGESVFRVLVPVQKVGAVIGRKGEFIKKMCEESRARIKILDG 164

Query: 714  PPGAPERTVMISAKEEPDASVSPAMDGLLRVHKRIIDGLDGESGLAPSAAGNTLPTRLLV 535
            PPG PER VMISAK+EPDA VSPA+DGLLRVHKRI DGLD E+      AG   PTRLLV
Sbjct: 165  PPGVPERAVMISAKDEPDALVSPAVDGLLRVHKRITDGLDSETDQPQRGAGPVGPTRLLV 224

Query: 534  AATQAGSLIGKHGATIKSIQESCSSIVRVVDNLPPVALPDDRVVEIQGEPIGMHKAVELI 355
             A+QAGSLIGK GATIKSIQ++    +R+++N+PPVAL DDRVVEIQGEP+ +HKAVELI
Sbjct: 225  PASQAGSLIGKQGATIKSIQDASKCALRILENVPPVALNDDRVVEIQGEPLDVHKAVELI 284

Query: 354  AAHLRKFLVDRSVLPLFE-KRPLPNMHMEQNMPPPQPWG------HSQGLPPGAGSAYGG 196
            A+HLRKFLVDRSVLPLFE +  + N+  EQ MP PQPWG      H   +PP  G  YGG
Sbjct: 285  ASHLRKFLVDRSVLPLFEAQMKVHNVPREQPMPAPQPWGPPPQWSHPPNIPP-PGPGYGG 343

Query: 195  N-----PQXXDSFY-PPDLPPLEKQPHHGISMYGQNAPTAGVHS-GANQQPQSMISQITQ 37
            N     P+  D++Y PPD+ P+EKQP +GIS YG++AP +G      NQ      SQITQ
Sbjct: 344  NPHFMPPRPQDNYYPPPDVHPVEKQPQYGISSYGRDAPPSGAPPVSGNQHLPPGSSQITQ 403

Query: 36   HMQILLSYADAV 1
             +Q+ LSYADAV
Sbjct: 404  TLQVPLSYADAV 415


>gb|ABF97725.1| KH domain containing protein, expressed [Oryza sativa Japonica Group]
          Length = 389

 Score =  372 bits (954), Expect = e-100
 Identities = 203/331 (61%), Positives = 240/331 (72%), Gaps = 20/331 (6%)
 Frame = -2

Query: 972  LMDELVEHTVEEETSG------DVGNSHDMKQEQDMQIEAESGEKRWPGWPGESVFRILI 811
            L  E  E+   EE S       D   + ++KQ+  + +EA+   K+WPGWPGESVFRILI
Sbjct: 58   LYSEEPENQYNEEPSNPYQEESDNAYNGEVKQQDSLPVEAD---KKWPGWPGESVFRILI 114

Query: 810  PSNKVGSLIGRKGEFIKKMCEESKARIKILDGPPGAPERTVMISAKEEPDASVSPAMDGL 631
            P+ KVG++IGRKGEFIKKMCEESKARIKILDGPPG PERTVMISAK+EPDA +SPAMDGL
Sbjct: 115  PAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAPISPAMDGL 174

Query: 630  LRVHKRIIDGLDGESGLAPSAAGNTLPTRLLVAATQAGSLIGKHGATIKSIQESCSSIVR 451
             RV+KRI DG DG+SG       N  PTRLLV A+QAGSLIGK GATIKSIQ+S  SIVR
Sbjct: 175  FRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQDSSKSIVR 234

Query: 450  VVDNLPPVALPDDRVVEIQGEPIGMHKAVELIAAHLRKFLVDRSVLPLFE-KRPLPNMHM 274
            +V+ LP VAL DDRVVEIQGEP+G+ KA+E IA+HLRKFLVDRSVLPLFE +  + N   
Sbjct: 235  IVETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKFLVDRSVLPLFEGQMKMHNAQR 294

Query: 273  EQNMPPPQPWGHSQ-------GLPPGAGSAYGGNPQ-----XXDSFY-PPDLPPLEKQPH 133
            EQ M  PQPWG  Q        LPPG G  YGG+PQ       D++Y PPD+P +EKQPH
Sbjct: 295  EQAMAAPQPWGPPQPWGPPPSHLPPG-GPGYGGHPQFMPPRPQDNYYPPPDVPSMEKQPH 353

Query: 132  HGISMYGQNAPTAGVHSGANQQPQSMISQIT 40
            +GIS YG+ APT GV +  NQ P  + SQ++
Sbjct: 354  YGISAYGREAPT-GVSASGNQPPSHVASQVS 383