BLASTX nr result

ID: Zingiber23_contig00003409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00003409
         (802 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004238935.1| PREDICTED: ethylene-responsive transcription...    60   1e-06
ref|XP_002325634.2| hypothetical protein POPTR_0019s15190g [Popu...    57   6e-06

>ref|XP_004238935.1| PREDICTED: ethylene-responsive transcription factor ERF118-like
           isoform 1 [Solanum lycopersicum]
           gi|460386500|ref|XP_004238936.1| PREDICTED:
           ethylene-responsive transcription factor ERF118-like
           isoform 2 [Solanum lycopersicum]
          Length = 341

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 37/120 (30%), Positives = 57/120 (47%)
 Frame = +3

Query: 441 KMGKRRAKNQQQLVRSGSSCQHESKRWARTIRVVFDDPDATESSGDEGFSYSFRRRRAIH 620
           KM + R ++Q+  +R       ES R  R IR+V DDP+AT+SS DEG   S + +R + 
Sbjct: 2   KMSESRRQSQKSKIRE------ESARPMRKIRIVCDDPEATDSSDDEGVDVS-KPKRFVR 54

Query: 621 EXXXXXXXXXXXXXXXXRESSGRNRKIAQTRKPQXXXXXXXXXXXXARFKGVRQRPWGKW 800
           E                 ESS ++      ++ +            ++++GVRQR WGKW
Sbjct: 55  EIYLPVVSSFTLKKVPETESSCQDSNNGDKKRAKTPKTPSGPRPSSSKYRGVRQRKWGKW 114


>ref|XP_002325634.2| hypothetical protein POPTR_0019s15190g [Populus trichocarpa]
           gi|550317612|gb|EEF00016.2| hypothetical protein
           POPTR_0019s15190g [Populus trichocarpa]
          Length = 321

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 43/125 (34%), Positives = 52/125 (41%), Gaps = 8/125 (6%)
 Frame = +3

Query: 450 KRRAKNQQQLVRSGSSCQHESKR--WARTIRVVFDDPDATESSGDEGFSYSFRRR----- 608
           K+  KNQQQ        QH S R    R +R++  DPDAT+SS DEG      RR     
Sbjct: 25  KKLIKNQQQ--------QHPSSRIRGQRLVRIIHTDPDATDSSSDEGEEQEQERRFVRRV 76

Query: 609 -RAIHEXXXXXXXXXXXXXXXXRESSGRNRKIAQTRKPQXXXXXXXXXXXXARFKGVRQR 785
            R + E                R S+  +R    TRK                F+GVRQR
Sbjct: 77  KRQVSEIRLLEQETTAPAAPSSRTSNDDHRD--PTRKRPSSRLPVSDVTRRKNFRGVRQR 134

Query: 786 PWGKW 800
           PWGKW
Sbjct: 135 PWGKW 139


Top