BLASTX nr result

ID: Zingiber23_contig00003399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00003399
         (273 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282641.1| PREDICTED: 60S ribosomal protein L10a-1-like...    89   5e-16
gb|ABK22290.1| unknown [Picea sitchensis] gi|148908521|gb|ABR173...    89   5e-16
ref|XP_002274218.2| PREDICTED: 60S ribosomal protein L10a-1-like...    89   8e-16
gb|ESW22062.1| hypothetical protein PHAVU_005G123700g [Phaseolus...    88   1e-15
gb|AAG17879.1|AF293406_1 60S ribosomal protein L10A, partial [Ph...    88   1e-15
gb|EEE56857.1| hypothetical protein OsJ_06480 [Oryza sativa Japo...    88   1e-15
gb|ABK22320.1| unknown [Picea sitchensis]                              88   1e-15
ref|XP_002445683.1| hypothetical protein SORBIDRAFT_07g024200 [S...    87   2e-15
ref|XP_006647216.1| PREDICTED: 60S ribosomal protein L10a-1-like...    87   2e-15
ref|XP_006645057.1| PREDICTED: 60S ribosomal protein L10a-1-like...    87   2e-15
ref|NP_001046690.1| Os02g0321900 [Oryza sativa Japonica Group] g...    87   2e-15
dbj|BAH00793.1| unnamed protein product [Oryza sativa Japonica G...    87   2e-15
gb|EXB97028.1| 60S ribosomal protein L10a-1 [Morus notabilis]          87   3e-15
gb|EXB97027.1| 60S ribosomal protein L10a-1 [Morus notabilis]          87   3e-15
ref|XP_006659690.1| PREDICTED: 60S ribosomal protein L10a-1-like...    87   3e-15
gb|EMS49518.1| 60S ribosomal protein L10a-1 [Triticum urartu]          87   3e-15
pdb|3J61|ZZ Chain z, Localization Of The Large Subunit Ribosomal...    87   3e-15
ref|XP_003574928.1| PREDICTED: 60S ribosomal protein L10a-2-like...    87   3e-15
ref|NP_001237030.1| uncharacterized protein LOC100527763 [Glycin...    87   3e-15
emb|CAN67239.1| hypothetical protein VITISV_004804 [Vitis vinifera]    87   3e-15

>ref|XP_002282641.1| PREDICTED: 60S ribosomal protein L10a-1-like [Vitis vinifera]
          Length = 216

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 43/49 (87%), Positives = 47/49 (95%)
 Frame = +2

Query: 125 MSKLQSDVLREAISQIVGDSREKKRNFTETIELQIGLKNYDPQKDKRFS 271
           MSKLQS+ LREAI+QIVGD++EKKRNF ETIELQIGLKNYDPQKDKRFS
Sbjct: 1   MSKLQSEALREAITQIVGDAKEKKRNFIETIELQIGLKNYDPQKDKRFS 49


>gb|ABK22290.1| unknown [Picea sitchensis] gi|148908521|gb|ABR17372.1| unknown
           [Picea sitchensis]
          Length = 216

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 43/49 (87%), Positives = 47/49 (95%)
 Frame = +2

Query: 125 MSKLQSDVLREAISQIVGDSREKKRNFTETIELQIGLKNYDPQKDKRFS 271
           MSKLQSDVLREAISQ++ DS+EK+R FTETIELQIGLKNYDPQKDKRFS
Sbjct: 1   MSKLQSDVLREAISQVMADSKEKQRKFTETIELQIGLKNYDPQKDKRFS 49


>ref|XP_002274218.2| PREDICTED: 60S ribosomal protein L10a-1-like [Vitis vinifera]
          Length = 216

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 43/49 (87%), Positives = 46/49 (93%)
 Frame = +2

Query: 125 MSKLQSDVLREAISQIVGDSREKKRNFTETIELQIGLKNYDPQKDKRFS 271
           MSKLQSD LREAI+ IV +S+EKKRNFTETIELQIGLKNYDPQKDKRFS
Sbjct: 1   MSKLQSDALREAITNIVNESKEKKRNFTETIELQIGLKNYDPQKDKRFS 49


>gb|ESW22062.1| hypothetical protein PHAVU_005G123700g [Phaseolus vulgaris]
          Length = 216

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 43/49 (87%), Positives = 45/49 (91%)
 Frame = +2

Query: 125 MSKLQSDVLREAISQIVGDSREKKRNFTETIELQIGLKNYDPQKDKRFS 271
           MSKLQSD LREAIS I+GDS+EK RNF ETIELQIGLKNYDPQKDKRFS
Sbjct: 1   MSKLQSDALREAISGIMGDSKEKNRNFVETIELQIGLKNYDPQKDKRFS 49


>gb|AAG17879.1|AF293406_1 60S ribosomal protein L10A, partial [Phaseolus coccineus]
          Length = 88

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 43/49 (87%), Positives = 45/49 (91%)
 Frame = +2

Query: 125 MSKLQSDVLREAISQIVGDSREKKRNFTETIELQIGLKNYDPQKDKRFS 271
           MSKLQSD LREAIS I+GDS+EK RNF ETIELQIGLKNYDPQKDKRFS
Sbjct: 1   MSKLQSDALREAISGIMGDSKEKNRNFVETIELQIGLKNYDPQKDKRFS 49


>gb|EEE56857.1| hypothetical protein OsJ_06480 [Oryza sativa Japonica Group]
          Length = 322

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 47/65 (72%), Positives = 49/65 (75%)
 Frame = +2

Query: 77  LPSASRFERGKTYT*KMSKLQSDVLREAISQIVGDSREKKRNFTETIELQIGLKNYDPQK 256
           LP  S     +T    MSKLQSD LREAISQI  DSREK+R F ETIELQIGLKNYDPQK
Sbjct: 96  LPRTSSRICARTTGGAMSKLQSDALREAISQIANDSREKQRKFVETIELQIGLKNYDPQK 155

Query: 257 DKRFS 271
           DKRFS
Sbjct: 156 DKRFS 160


>gb|ABK22320.1| unknown [Picea sitchensis]
          Length = 216

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 41/49 (83%), Positives = 47/49 (95%)
 Frame = +2

Query: 125 MSKLQSDVLREAISQIVGDSREKKRNFTETIELQIGLKNYDPQKDKRFS 271
           MSKLQSDVLRE I+Q++G+S++KKR FTETIELQIGLKNYDPQKDKRFS
Sbjct: 1   MSKLQSDVLREGITQVMGESKDKKRKFTETIELQIGLKNYDPQKDKRFS 49


>ref|XP_002445683.1| hypothetical protein SORBIDRAFT_07g024200 [Sorghum bicolor]
           gi|242081831|ref|XP_002445684.1| hypothetical protein
           SORBIDRAFT_07g024210 [Sorghum bicolor]
           gi|241942033|gb|EES15178.1| hypothetical protein
           SORBIDRAFT_07g024200 [Sorghum bicolor]
           gi|241942034|gb|EES15179.1| hypothetical protein
           SORBIDRAFT_07g024210 [Sorghum bicolor]
          Length = 216

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 41/49 (83%), Positives = 47/49 (95%)
 Frame = +2

Query: 125 MSKLQSDVLREAISQIVGDSREKKRNFTETIELQIGLKNYDPQKDKRFS 271
           MSKLQS+VL++AISQIVGD++EK R FTET+ELQIGLKNYDPQKDKRFS
Sbjct: 1   MSKLQSEVLKDAISQIVGDAKEKNRKFTETVELQIGLKNYDPQKDKRFS 49


>ref|XP_006647216.1| PREDICTED: 60S ribosomal protein L10a-1-like [Oryza brachyantha]
          Length = 216

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 43/49 (87%), Positives = 44/49 (89%)
 Frame = +2

Query: 125 MSKLQSDVLREAISQIVGDSREKKRNFTETIELQIGLKNYDPQKDKRFS 271
           MSKLQSD LREAISQI  DSREK+R F ETIELQIGLKNYDPQKDKRFS
Sbjct: 1   MSKLQSDALREAISQIANDSREKQRKFVETIELQIGLKNYDPQKDKRFS 49


>ref|XP_006645057.1| PREDICTED: 60S ribosomal protein L10a-1-like [Oryza brachyantha]
          Length = 216

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 43/49 (87%), Positives = 44/49 (89%)
 Frame = +2

Query: 125 MSKLQSDVLREAISQIVGDSREKKRNFTETIELQIGLKNYDPQKDKRFS 271
           MSKLQSD LREAISQI  DSREK+R F ETIELQIGLKNYDPQKDKRFS
Sbjct: 1   MSKLQSDALREAISQITNDSREKQRKFVETIELQIGLKNYDPQKDKRFS 49


>ref|NP_001046690.1| Os02g0321900 [Oryza sativa Japonica Group]
           gi|50252685|dbj|BAD28853.1| putative ribosomal protein
           L10a [Oryza sativa Japonica Group]
           gi|113536221|dbj|BAF08604.1| Os02g0321900 [Oryza sativa
           Japonica Group] gi|215692826|dbj|BAG88217.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215734901|dbj|BAG95623.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 216

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 43/49 (87%), Positives = 44/49 (89%)
 Frame = +2

Query: 125 MSKLQSDVLREAISQIVGDSREKKRNFTETIELQIGLKNYDPQKDKRFS 271
           MSKLQSD LREAISQI  DSREK+R F ETIELQIGLKNYDPQKDKRFS
Sbjct: 1   MSKLQSDALREAISQIANDSREKQRKFVETIELQIGLKNYDPQKDKRFS 49


>dbj|BAH00793.1| unnamed protein product [Oryza sativa Japonica Group]
           gi|218201604|gb|EEC84031.1| hypothetical protein
           OsI_30261 [Oryza sativa Indica Group]
           gi|222641014|gb|EEE69146.1| hypothetical protein
           OsJ_28271 [Oryza sativa Japonica Group]
          Length = 216

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 41/49 (83%), Positives = 47/49 (95%)
 Frame = +2

Query: 125 MSKLQSDVLREAISQIVGDSREKKRNFTETIELQIGLKNYDPQKDKRFS 271
           MSKLQS+VL+EAISQ+VG+S+EK R FTET+ELQIGLKNYDPQKDKRFS
Sbjct: 1   MSKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFS 49


>gb|EXB97028.1| 60S ribosomal protein L10a-1 [Morus notabilis]
          Length = 267

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 46/63 (73%), Positives = 51/63 (80%)
 Frame = +2

Query: 83  SASRFERGKTYT*KMSKLQSDVLREAISQIVGDSREKKRNFTETIELQIGLKNYDPQKDK 262
           S SR  R +     +SKLQSDVLREAIS I+ +S+EK RNFTETIELQIGLKNYDPQKDK
Sbjct: 38  SPSRGTRRRFCGKGLSKLQSDVLREAISVIMNESKEKNRNFTETIELQIGLKNYDPQKDK 97

Query: 263 RFS 271
           RFS
Sbjct: 98  RFS 100


>gb|EXB97027.1| 60S ribosomal protein L10a-1 [Morus notabilis]
          Length = 267

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 46/63 (73%), Positives = 51/63 (80%)
 Frame = +2

Query: 83  SASRFERGKTYT*KMSKLQSDVLREAISQIVGDSREKKRNFTETIELQIGLKNYDPQKDK 262
           S SR  R +     +SKLQSDVLREAIS I+ +S+EK RNFTETIELQIGLKNYDPQKDK
Sbjct: 38  SPSRGTRRRFCGKGLSKLQSDVLREAISVIMNESKEKNRNFTETIELQIGLKNYDPQKDK 97

Query: 263 RFS 271
           RFS
Sbjct: 98  RFS 100


>ref|XP_006659690.1| PREDICTED: 60S ribosomal protein L10a-1-like [Oryza brachyantha]
           gi|573954901|ref|XP_006659691.1| PREDICTED: 60S
           ribosomal protein L10a-1-like [Oryza brachyantha]
          Length = 216

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 40/49 (81%), Positives = 46/49 (93%)
 Frame = +2

Query: 125 MSKLQSDVLREAISQIVGDSREKKRNFTETIELQIGLKNYDPQKDKRFS 271
           MSKLQ++ L+EAISQ+VGDS+EK R FTET+ELQIGLKNYDPQKDKRFS
Sbjct: 1   MSKLQTEALKEAISQVVGDSKEKNRKFTETVELQIGLKNYDPQKDKRFS 49


>gb|EMS49518.1| 60S ribosomal protein L10a-1 [Triticum urartu]
          Length = 211

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 40/49 (81%), Positives = 47/49 (95%)
 Frame = +2

Query: 125 MSKLQSDVLREAISQIVGDSREKKRNFTETIELQIGLKNYDPQKDKRFS 271
           MSKLQSD +++AI+QIVG++REKKR FTET+ELQIGLKNYDPQKDKRFS
Sbjct: 1   MSKLQSDAVKDAITQIVGEAREKKRKFTETVELQIGLKNYDPQKDKRFS 49


>pdb|3J61|ZZ Chain z, Localization Of The Large Subunit Ribosomal Proteins Into
           A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s
           Ribosome gi|57471702|gb|AAW50982.1| ribosomal protein
           L10A [Triticum aestivum] gi|326489663|dbj|BAK01812.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 216

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 40/49 (81%), Positives = 47/49 (95%)
 Frame = +2

Query: 125 MSKLQSDVLREAISQIVGDSREKKRNFTETIELQIGLKNYDPQKDKRFS 271
           MSKLQSD +++AI+QIVG++REKKR FTET+ELQIGLKNYDPQKDKRFS
Sbjct: 1   MSKLQSDAVKDAITQIVGEAREKKRKFTETVELQIGLKNYDPQKDKRFS 49


>ref|XP_003574928.1| PREDICTED: 60S ribosomal protein L10a-2-like [Brachypodium
           distachyon]
          Length = 216

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 40/49 (81%), Positives = 47/49 (95%)
 Frame = +2

Query: 125 MSKLQSDVLREAISQIVGDSREKKRNFTETIELQIGLKNYDPQKDKRFS 271
           MSKLQS+ +++AI+QIVGD+REKKR FTET+ELQIGLKNYDPQKDKRFS
Sbjct: 1   MSKLQSEAVKDAITQIVGDAREKKRKFTETVELQIGLKNYDPQKDKRFS 49


>ref|NP_001237030.1| uncharacterized protein LOC100527763 [Glycine max]
           gi|255633136|gb|ACU16923.1| unknown [Glycine max]
          Length = 216

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 42/49 (85%), Positives = 45/49 (91%)
 Frame = +2

Query: 125 MSKLQSDVLREAISQIVGDSREKKRNFTETIELQIGLKNYDPQKDKRFS 271
           MSKLQSD LREAISQ+V +S+EK R FTETIELQIGLKNYDPQKDKRFS
Sbjct: 1   MSKLQSDALREAISQVVSNSKEKNRKFTETIELQIGLKNYDPQKDKRFS 49


>emb|CAN67239.1| hypothetical protein VITISV_004804 [Vitis vinifera]
          Length = 920

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 42/48 (87%), Positives = 45/48 (93%)
 Frame = +2

Query: 128 SKLQSDVLREAISQIVGDSREKKRNFTETIELQIGLKNYDPQKDKRFS 271
           SKLQSD LREAI+ IV +S+EKKRNFTETIELQIGLKNYDPQKDKRFS
Sbjct: 787 SKLQSDALREAITNIVNESKEKKRNFTETIELQIGLKNYDPQKDKRFS 834


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