BLASTX nr result
ID: Zingiber23_contig00003291
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00003291
(238 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006279491.1| hypothetical protein CARUB_v10026533mg [Caps... 74 2e-11
ref|XP_006401344.1| hypothetical protein EUTSA_v10013831mg [Eutr... 73 3e-11
ref|XP_004294935.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 72 6e-11
ref|NP_200445.1| protein ATCRT1 [Arabidopsis thaliana] gi|101778... 72 6e-11
ref|XP_006392629.1| hypothetical protein EUTSA_v10012351mg, part... 71 1e-10
ref|XP_002523395.1| zinc finger protein, putative [Ricinus commu... 71 1e-10
ref|XP_004502170.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 70 2e-10
ref|XP_002864451.1| zinc finger family protein [Arabidopsis lyra... 70 2e-10
ref|XP_002303979.2| zinc finger family protein [Populus trichoca... 70 4e-10
gb|EOY31658.1| RING/U-box superfamily protein, putative isoform ... 69 6e-10
gb|EOY31654.1| RING/U-box superfamily protein isoform 1 [Theobro... 69 6e-10
ref|NP_194370.2| RING/U-box domain-containing protein [Arabidops... 69 6e-10
ref|XP_004149638.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 69 8e-10
ref|XP_002297615.2| hypothetical protein POPTR_0001s03880g [Popu... 68 1e-09
ref|XP_002867566.1| zinc finger family protein [Arabidopsis lyra... 68 1e-09
ref|XP_002862493.1| hypothetical protein ARALYDRAFT_359584 [Arab... 68 1e-09
gb|EXC04259.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis] 67 2e-09
ref|XP_006413189.1| hypothetical protein EUTSA_v10025560mg [Eutr... 67 2e-09
ref|XP_002894508.1| zinc finger family protein [Arabidopsis lyra... 66 4e-09
ref|NP_564693.1| RING/U-box domain-containing protein [Arabidops... 66 4e-09
>ref|XP_006279491.1| hypothetical protein CARUB_v10026533mg [Capsella rubella]
gi|482548195|gb|EOA12389.1| hypothetical protein
CARUB_v10026533mg [Capsella rubella]
Length = 399
Score = 74.3 bits (181), Expect = 2e-11
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = -2
Query: 141 MDEHLAARYWCHMCSTMVNPIMGAEIECPICNGGFVEEMNWGG 13
MDE +AARYWCHMCS MVNPIM +EI+CP C GF+EEM+ G
Sbjct: 1 MDETMAARYWCHMCSQMVNPIMESEIKCPFCQSGFIEEMSGNG 43
>ref|XP_006401344.1| hypothetical protein EUTSA_v10013831mg [Eutrema salsugineum]
gi|557102434|gb|ESQ42797.1| hypothetical protein
EUTSA_v10013831mg [Eutrema salsugineum]
Length = 378
Score = 73.2 bits (178), Expect = 3e-11
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = -2
Query: 141 MDEHLAARYWCHMCSTMVNPIMGAEIECPICNGGFVEEMNWGG 13
M+E +AARYWCHMCS MVNPIM +EI+CP C GFVEEM+ G
Sbjct: 1 MEETMAARYWCHMCSQMVNPIMESEIKCPFCQSGFVEEMSGNG 43
>ref|XP_004294935.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Fragaria vesca subsp. vesca]
gi|470117588|ref|XP_004294936.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform 2 [Fragaria
vesca subsp. vesca] gi|470117590|ref|XP_004294937.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform 3 [Fragaria vesca subsp. vesca]
Length = 375
Score = 72.4 bits (176), Expect = 6e-11
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = -2
Query: 141 MDEHLAARYWCHMCSTMVNPIMGAEIECPICNGGFVEEMN 22
M+E +AARYWCHMCS MVNPIMG E++CP C GF+EEM+
Sbjct: 1 MEEAIAARYWCHMCSQMVNPIMGEEMKCPFCQSGFIEEMD 40
>ref|NP_200445.1| protein ATCRT1 [Arabidopsis thaliana] gi|10177832|dbj|BAB11261.1|
unnamed protein product [Arabidopsis thaliana]
gi|17380898|gb|AAL36261.1| unknown protein [Arabidopsis
thaliana] gi|20259581|gb|AAM14133.1| unknown protein
[Arabidopsis thaliana] gi|332009368|gb|AED96751.1|
RING/U-box domain-containing protein [Arabidopsis
thaliana]
Length = 396
Score = 72.4 bits (176), Expect = 6e-11
Identities = 28/43 (65%), Positives = 35/43 (81%)
Frame = -2
Query: 141 MDEHLAARYWCHMCSTMVNPIMGAEIECPICNGGFVEEMNWGG 13
M+E +AARYWCHMCS MVNP+M +EI+CP C GF+EEM+ G
Sbjct: 1 MEETMAARYWCHMCSQMVNPVMESEIKCPFCQSGFIEEMSGNG 43
>ref|XP_006392629.1| hypothetical protein EUTSA_v10012351mg, partial [Eutrema
salsugineum] gi|557089207|gb|ESQ29915.1| hypothetical
protein EUTSA_v10012351mg, partial [Eutrema salsugineum]
Length = 389
Score = 71.2 bits (173), Expect = 1e-10
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = -2
Query: 159 KRKAGSMDEHLAARYWCHMCSTMVNPIMGAEIECPICNGGFVEEM 25
K K +M+E +A+RYWCHMCS VNP+M AEI+CP C GF+EEM
Sbjct: 60 KYKESAMEEAIASRYWCHMCSQTVNPVMEAEIKCPFCRSGFIEEM 104
>ref|XP_002523395.1| zinc finger protein, putative [Ricinus communis]
gi|223537345|gb|EEF38974.1| zinc finger protein,
putative [Ricinus communis]
Length = 394
Score = 71.2 bits (173), Expect = 1e-10
Identities = 30/40 (75%), Positives = 35/40 (87%)
Frame = -2
Query: 141 MDEHLAARYWCHMCSTMVNPIMGAEIECPICNGGFVEEMN 22
M+E LAARYWC++CS MVNPIM AEI+CP C GGFVEEM+
Sbjct: 1 MEEALAARYWCYLCSQMVNPIMEAEIKCPFCLGGFVEEMS 40
>ref|XP_004502170.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X1 [Cicer
arietinum] gi|502134582|ref|XP_004502171.1| PREDICTED:
E3 ubiquitin-protein ligase RING1-like isoform X2 [Cicer
arietinum]
Length = 367
Score = 70.5 bits (171), Expect = 2e-10
Identities = 27/40 (67%), Positives = 33/40 (82%)
Frame = -2
Query: 141 MDEHLAARYWCHMCSTMVNPIMGAEIECPICNGGFVEEMN 22
MDE +AARYWCH CS +VNP+M E++CP+C GFVEEMN
Sbjct: 1 MDETMAARYWCHACSQIVNPVMEVEMKCPVCQSGFVEEMN 40
>ref|XP_002864451.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297310286|gb|EFH40710.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 395
Score = 70.5 bits (171), Expect = 2e-10
Identities = 30/45 (66%), Positives = 36/45 (80%), Gaps = 2/45 (4%)
Frame = -2
Query: 141 MDEHLAARYWCHMCSTMVNPIMGAEIECPICNGGFVEEM--NWGG 13
M+E +A+RYWCHMCS MVNPIM +EI+CP C GF+EEM N GG
Sbjct: 1 MEETMASRYWCHMCSQMVNPIMESEIKCPFCQSGFIEEMSGNSGG 45
>ref|XP_002303979.2| zinc finger family protein [Populus trichocarpa]
gi|550343656|gb|EEE78958.2| zinc finger family protein
[Populus trichocarpa]
Length = 388
Score = 69.7 bits (169), Expect = 4e-10
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = -2
Query: 153 KAGSMDEHLAARYWCHMCSTMVNPIMGAEIECPICNGGFVEEM 25
+ G + +AARYWCHMCS MVNPIMG EI+CP C GF+E+M
Sbjct: 5 EGGEGGQTMAARYWCHMCSQMVNPIMGVEIKCPFCQNGFIEDM 47
>gb|EOY31658.1| RING/U-box superfamily protein, putative isoform 5, partial
[Theobroma cacao]
Length = 310
Score = 68.9 bits (167), Expect = 6e-10
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = -2
Query: 141 MDEHLAARYWCHMCSTMVNPIMGAEIECPICNGGFVEEMNWG 16
M+E +AARYWCH CS +VNPIM EI+CP+C GF+EEM+ G
Sbjct: 1 MEEAMAARYWCHQCSRIVNPIMEVEIKCPVCETGFIEEMSSG 42
>gb|EOY31654.1| RING/U-box superfamily protein isoform 1 [Theobroma cacao]
gi|508784399|gb|EOY31655.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
gi|508784400|gb|EOY31656.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
gi|508784401|gb|EOY31657.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
Length = 367
Score = 68.9 bits (167), Expect = 6e-10
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = -2
Query: 141 MDEHLAARYWCHMCSTMVNPIMGAEIECPICNGGFVEEMNWG 16
M+E +AARYWCH CS +VNPIM EI+CP+C GF+EEM+ G
Sbjct: 1 MEEAMAARYWCHQCSRIVNPIMEVEIKCPVCETGFIEEMSSG 42
>ref|NP_194370.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|30687206|ref|NP_849554.1| RING/U-box
domain-containing protein [Arabidopsis thaliana]
gi|20466682|gb|AAM20658.1| putative protein [Arabidopsis
thaliana] gi|23198194|gb|AAN15624.1| putative protein
[Arabidopsis thaliana] gi|222424453|dbj|BAH20182.1|
AT4G26400 [Arabidopsis thaliana]
gi|332659793|gb|AEE85193.1| RING/U-box domain-containing
protein [Arabidopsis thaliana]
gi|332659794|gb|AEE85194.1| RING/U-box domain-containing
protein [Arabidopsis thaliana]
Length = 356
Score = 68.9 bits (167), Expect = 6e-10
Identities = 26/36 (72%), Positives = 32/36 (88%)
Frame = -2
Query: 129 LAARYWCHMCSTMVNPIMGAEIECPICNGGFVEEMN 22
++ARYWCHMCS MVNP++GAEI+CP C GFVEEM+
Sbjct: 1 MSARYWCHMCSQMVNPVIGAEIKCPFCQSGFVEEMS 36
>ref|XP_004149638.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
gi|449519040|ref|XP_004166543.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 362
Score = 68.6 bits (166), Expect = 8e-10
Identities = 28/42 (66%), Positives = 32/42 (76%)
Frame = -2
Query: 141 MDEHLAARYWCHMCSTMVNPIMGAEIECPICNGGFVEEMNWG 16
MDE +A RYWCHMCS MVNPI+ EI+CP C GFVEE+ G
Sbjct: 1 MDELIATRYWCHMCSQMVNPIVDVEIKCPFCRSGFVEEIGNG 42
>ref|XP_002297615.2| hypothetical protein POPTR_0001s03880g [Populus trichocarpa]
gi|550346456|gb|EEE82420.2| hypothetical protein
POPTR_0001s03880g [Populus trichocarpa]
Length = 382
Score = 68.2 bits (165), Expect = 1e-09
Identities = 26/40 (65%), Positives = 33/40 (82%)
Frame = -2
Query: 141 MDEHLAARYWCHMCSTMVNPIMGAEIECPICNGGFVEEMN 22
M+E +AARYWC+MCS MVNP+M EI+CP C GF+EEM+
Sbjct: 1 MEEAMAARYWCYMCSQMVNPVMEVEIKCPFCQSGFIEEMS 40
>ref|XP_002867566.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297313402|gb|EFH43825.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 357
Score = 67.8 bits (164), Expect = 1e-09
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = -2
Query: 129 LAARYWCHMCSTMVNPIMGAEIECPICNGGFVEEMN 22
+AARYWCHMCS MVNPI+ AEI+CP C GFVEEM+
Sbjct: 1 MAARYWCHMCSQMVNPIIDAEIKCPFCQSGFVEEMS 36
>ref|XP_002862493.1| hypothetical protein ARALYDRAFT_359584 [Arabidopsis lyrata subsp.
lyrata] gi|297308041|gb|EFH38751.1| hypothetical protein
ARALYDRAFT_359584 [Arabidopsis lyrata subsp. lyrata]
Length = 216
Score = 67.8 bits (164), Expect = 1e-09
Identities = 29/41 (70%), Positives = 33/41 (80%), Gaps = 2/41 (4%)
Frame = -2
Query: 129 LAARYWCHMCSTMVNPIMGAEIECPICNGGFVEEM--NWGG 13
+AARYWCHMCS MVNPIM +EI+CP C GF+EEM N GG
Sbjct: 1 MAARYWCHMCSQMVNPIMESEIKCPFCQSGFIEEMSGNSGG 41
>gb|EXC04259.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis]
Length = 381
Score = 67.4 bits (163), Expect = 2e-09
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = -2
Query: 141 MDEHLAARYWCHMCSTMVNPIMGAEIECPICNGGFVEEMN 22
M+E +A+RYWCHMCS VNPIM EI+CP C GFVEEM+
Sbjct: 1 MEETIASRYWCHMCSQEVNPIMEVEIKCPFCQSGFVEEMS 40
>ref|XP_006413189.1| hypothetical protein EUTSA_v10025560mg [Eutrema salsugineum]
gi|557114359|gb|ESQ54642.1| hypothetical protein
EUTSA_v10025560mg [Eutrema salsugineum]
Length = 358
Score = 67.0 bits (162), Expect = 2e-09
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = -2
Query: 129 LAARYWCHMCSTMVNPIMGAEIECPICNGGFVEEMN 22
+AARYWCHMCS MVNPI+ AEI+CP C GFVEEM+
Sbjct: 1 MAARYWCHMCSQMVNPIIDAEIKCPSCQSGFVEEMS 36
>ref|XP_002894508.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297340350|gb|EFH70767.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 346
Score = 66.2 bits (160), Expect = 4e-09
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = -2
Query: 141 MDEHLAARYWCHMCSTMVNPIMGAEIECPICNGGFVEEM 25
M+E +A RYWCHMCS V+P+M AEI+CP C GFVEEM
Sbjct: 1 MEEAIATRYWCHMCSQTVDPVMEAEIKCPFCQSGFVEEM 39
>ref|NP_564693.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|15983408|gb|AAL11572.1|AF424578_1 At1g55530/T5A14_7
[Arabidopsis thaliana] gi|4204263|gb|AAD10644.1| Unknown
protein [Arabidopsis thaliana]
gi|14517546|gb|AAK62663.1| At1g55530/T5A14_7
[Arabidopsis thaliana] gi|23308203|gb|AAN18071.1|
At1g55530/T5A14_7 [Arabidopsis thaliana]
gi|332195138|gb|AEE33259.1| RING/U-box domain-containing
protein [Arabidopsis thaliana]
Length = 351
Score = 66.2 bits (160), Expect = 4e-09
Identities = 26/39 (66%), Positives = 30/39 (76%)
Frame = -2
Query: 141 MDEHLAARYWCHMCSTMVNPIMGAEIECPICNGGFVEEM 25
M+E + RYWCHMCS VNP+M AEI+CP C GFVEEM
Sbjct: 1 MEEAVVTRYWCHMCSQTVNPVMEAEIKCPFCQSGFVEEM 39