BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00003242
         (301 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006357368.1| PREDICTED: 60S ribosomal protein L28-1-like ...   112   7e-23
ref|XP_004241945.1| PREDICTED: 60S ribosomal protein L28-1-like ...   111   9e-23
ref|XP_004241944.1| PREDICTED: 60S ribosomal protein L28-1-like ...   111   9e-23
ref|XP_004241943.1| PREDICTED: 60S ribosomal protein L28-1-like ...   111   9e-23
ref|XP_006648136.1| PREDICTED: 60S ribosomal protein L28-2-like ...   109   4e-22
ref|XP_006853948.1| hypothetical protein AMTR_s00036p00210210 [A...   108   7e-22
ref|XP_004235620.1| PREDICTED: 60S ribosomal protein L28-1-like ...   108   7e-22
ref|XP_004235619.1| PREDICTED: 60S ribosomal protein L28-1-like ...   108   7e-22
ref|XP_006654725.1| PREDICTED: 60S ribosomal protein L28-1-like ...   108   1e-21
gb|EOY27043.1| Ribosomal L28e protein family isoform 2 [Theobrom...   108   1e-21
gb|EOY27042.1| Ribosomal L28e protein family isoform 1 [Theobrom...   108   1e-21
ref|XP_002298257.1| 60S ribosomal protein L28 [Populus trichocar...   108   1e-21
ref|XP_006451378.1| hypothetical protein CICLE_v10009798mg [Citr...   107   1e-21
gb|EMJ03923.1| hypothetical protein PRUPE_ppa012901mg [Prunus pe...   107   2e-21
gb|EAY88056.1| hypothetical protein OsI_09485 [Oryza sativa Indi...   107   2e-21
ref|XP_002304107.1| hypothetical protein POPTR_0003s03980g [Popu...   106   3e-21
gb|EEE64545.1| hypothetical protein OsJ_19397 [Oryza sativa Japo...   106   4e-21
gb|EAY98875.1| hypothetical protein OsI_20825 [Oryza sativa Indi...   106   4e-21
gb|AAV67825.1| putative 60S ribosomal L28 protein [Oryza sativa ...   106   4e-21
pdb|3J61|RR Chain r, Localization Of The Large Subunit Ribosomal...   106   4e-21

>ref|XP_006357368.1| PREDICTED: 60S ribosomal protein L28-1-like [Solanum tuberosum]
          Length = 143

 Score =  112 bits (279), Expect = 7e-23
 Identities = 53/91 (58%), Positives = 67/91 (73%)
 Frame = +3

Query: 27  MATIPEPLIWEIVKKNNAFLVKQYGSGTNKVVFSREPNNLYNLNSYKHSGLANKKTVSIL 206
           M T+P  L+WEIVKKNN+FLVK++G+GT  VVFS+EPNNLYNL+SYKHSGLANKKTV+I 
Sbjct: 1   MTTVPAQLVWEIVKKNNSFLVKEFGNGTAGVVFSKEPNNLYNLHSYKHSGLANKKTVTIQ 60

Query: 207 PGDKDXXXXXXXXXXXXXXXPANLRNRTELK 299
           PG KD               P++L N++ +K
Sbjct: 61  PGGKDQSVLLATSKTKKQNKPSSLLNKSVMK 91


>ref|XP_004241945.1| PREDICTED: 60S ribosomal protein L28-1-like isoform 3 [Solanum
           lycopersicum]
          Length = 126

 Score =  111 bits (278), Expect = 9e-23
 Identities = 53/91 (58%), Positives = 67/91 (73%)
 Frame = +3

Query: 27  MATIPEPLIWEIVKKNNAFLVKQYGSGTNKVVFSREPNNLYNLNSYKHSGLANKKTVSIL 206
           M T+P  L+WEIVKKNN+FLVK++G+GT  VVFS+EPNNLYNL+SYKHSGLANKKTV+I 
Sbjct: 1   MTTVPGQLVWEIVKKNNSFLVKEFGNGTAGVVFSKEPNNLYNLHSYKHSGLANKKTVTIQ 60

Query: 207 PGDKDXXXXXXXXXXXXXXXPANLRNRTELK 299
           PG KD               P++L N++ +K
Sbjct: 61  PGGKDQSVLLATSKTKKQNKPSSLLNKSVMK 91


>ref|XP_004241944.1| PREDICTED: 60S ribosomal protein L28-1-like isoform 2 [Solanum
           lycopersicum]
          Length = 133

 Score =  111 bits (278), Expect = 9e-23
 Identities = 53/91 (58%), Positives = 67/91 (73%)
 Frame = +3

Query: 27  MATIPEPLIWEIVKKNNAFLVKQYGSGTNKVVFSREPNNLYNLNSYKHSGLANKKTVSIL 206
           M T+P  L+WEIVKKNN+FLVK++G+GT  VVFS+EPNNLYNL+SYKHSGLANKKTV+I 
Sbjct: 1   MTTVPGQLVWEIVKKNNSFLVKEFGNGTAGVVFSKEPNNLYNLHSYKHSGLANKKTVTIQ 60

Query: 207 PGDKDXXXXXXXXXXXXXXXPANLRNRTELK 299
           PG KD               P++L N++ +K
Sbjct: 61  PGGKDQSVLLATSKTKKQNKPSSLLNKSVMK 91


>ref|XP_004241943.1| PREDICTED: 60S ribosomal protein L28-1-like isoform 1 [Solanum
           lycopersicum]
          Length = 143

 Score =  111 bits (278), Expect = 9e-23
 Identities = 53/91 (58%), Positives = 67/91 (73%)
 Frame = +3

Query: 27  MATIPEPLIWEIVKKNNAFLVKQYGSGTNKVVFSREPNNLYNLNSYKHSGLANKKTVSIL 206
           M T+P  L+WEIVKKNN+FLVK++G+GT  VVFS+EPNNLYNL+SYKHSGLANKKTV+I 
Sbjct: 1   MTTVPGQLVWEIVKKNNSFLVKEFGNGTAGVVFSKEPNNLYNLHSYKHSGLANKKTVTIQ 60

Query: 207 PGDKDXXXXXXXXXXXXXXXPANLRNRTELK 299
           PG KD               P++L N++ +K
Sbjct: 61  PGGKDQSVLLATSKTKKQNKPSSLLNKSVMK 91


>ref|XP_006648136.1| PREDICTED: 60S ribosomal protein L28-2-like [Oryza brachyantha]
          Length = 147

 Score =  109 bits (272), Expect = 4e-22
 Identities = 53/92 (57%), Positives = 67/92 (72%), Gaps = 1/92 (1%)
 Frame = +3

Query: 27  MATIPEPLIWEIVKKNNAFLVKQYGSGTNKVVFSREPNNLYNLNSYKHSGLANKKTVSIL 206
           MAT+PEPLIWEIVKKNN FL+KQ+G+G  KV F++EPNNLYN++SYKHSGLANKKTV+I 
Sbjct: 1   MATVPEPLIWEIVKKNNCFLLKQFGNGNAKVQFTKEPNNLYNIHSYKHSGLANKKTVTIQ 60

Query: 207 P-GDKDXXXXXXXXXXXXXXXPANLRNRTELK 299
           P G KD               PA L +++ ++
Sbjct: 61  PSGGKDMAVVLSTSKTKRQNAPAKLNHKSVMR 92


>ref|XP_006853948.1| hypothetical protein AMTR_s00036p00210210 [Amborella trichopoda]
           gi|548857616|gb|ERN15415.1| hypothetical protein
           AMTR_s00036p00210210 [Amborella trichopoda]
          Length = 206

 Score =  108 bits (270), Expect = 7e-22
 Identities = 53/91 (58%), Positives = 67/91 (73%)
 Frame = +3

Query: 27  MATIPEPLIWEIVKKNNAFLVKQYGSGTNKVVFSREPNNLYNLNSYKHSGLANKKTVSIL 206
           MAT+P PLIWEIVKKNN+F VKQ+G+G+  V FS+E NNLYN++S+K+SGLANKKTVSI 
Sbjct: 58  MATLPGPLIWEIVKKNNSFFVKQFGNGSAMVQFSKESNNLYNVHSFKYSGLANKKTVSIT 117

Query: 207 PGDKDXXXXXXXXXXXXXXXPANLRNRTELK 299
           PG KD               P++L+NR+ LK
Sbjct: 118 PGGKDLSVALSTTKTRKQSKPSDLQNRSLLK 148


>ref|XP_004235620.1| PREDICTED: 60S ribosomal protein L28-1-like isoform 2 [Solanum
           lycopersicum]
          Length = 116

 Score =  108 bits (270), Expect = 7e-22
 Identities = 52/91 (57%), Positives = 65/91 (71%)
 Frame = +3

Query: 27  MATIPEPLIWEIVKKNNAFLVKQYGSGTNKVVFSREPNNLYNLNSYKHSGLANKKTVSIL 206
           M T+P  L+WEIVKKNN+FLVK++G+GT  VVFS+EPNNLYNL+SYKHSGLANKKTV+I 
Sbjct: 1   MTTVPGQLVWEIVKKNNSFLVKEFGNGTAGVVFSKEPNNLYNLHSYKHSGLANKKTVTIQ 60

Query: 207 PGDKDXXXXXXXXXXXXXXXPANLRNRTELK 299
           P  KD               P+ L N++ +K
Sbjct: 61  PDGKDKSVLLATSKTKKQNKPSRLLNKSVMK 91


>ref|XP_004235619.1| PREDICTED: 60S ribosomal protein L28-1-like isoform 1 [Solanum
           lycopersicum]
          Length = 143

 Score =  108 bits (270), Expect = 7e-22
 Identities = 52/91 (57%), Positives = 65/91 (71%)
 Frame = +3

Query: 27  MATIPEPLIWEIVKKNNAFLVKQYGSGTNKVVFSREPNNLYNLNSYKHSGLANKKTVSIL 206
           M T+P  L+WEIVKKNN+FLVK++G+GT  VVFS+EPNNLYNL+SYKHSGLANKKTV+I 
Sbjct: 1   MTTVPGQLVWEIVKKNNSFLVKEFGNGTAGVVFSKEPNNLYNLHSYKHSGLANKKTVTIQ 60

Query: 207 PGDKDXXXXXXXXXXXXXXXPANLRNRTELK 299
           P  KD               P+ L N++ +K
Sbjct: 61  PDGKDKSVLLATSKTKKQNKPSRLLNKSVMK 91


>ref|XP_006654725.1| PREDICTED: 60S ribosomal protein L28-1-like [Oryza brachyantha]
          Length = 147

 Score =  108 bits (269), Expect = 1e-21
 Identities = 54/92 (58%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
 Frame = +3

Query: 27  MATIPEPLIWEIVKKNNAFLVKQYGSGTNKVVFSREPNNLYNLNSYKHSGLANKKTVSIL 206
           MAT+PEPLIWEIVKKNN FLVKQ+G+G  KV F++EPNNLYN++SYKHSGLANKKTV I 
Sbjct: 1   MATVPEPLIWEIVKKNNCFLVKQFGNGNAKVQFTKEPNNLYNVHSYKHSGLANKKTVMIQ 60

Query: 207 P-GDKDXXXXXXXXXXXXXXXPANLRNRTELK 299
           P G KD               PA L +++ ++
Sbjct: 61  PSGAKDAAVVLSTTKTKKQNAPAKLYHKSVMR 92


>gb|EOY27043.1| Ribosomal L28e protein family isoform 2 [Theobroma cacao]
          Length = 150

 Score =  108 bits (269), Expect = 1e-21
 Identities = 53/91 (58%), Positives = 65/91 (71%)
 Frame = +3

Query: 27  MATIPEPLIWEIVKKNNAFLVKQYGSGTNKVVFSREPNNLYNLNSYKHSGLANKKTVSIL 206
           MAT+P  LIWEIVKKNN+FLVKQ+G GT  V FS+EPNNLYNLNSYKHSGLANKKTV+I 
Sbjct: 1   MATVPGQLIWEIVKKNNSFLVKQFGRGTASVQFSKEPNNLYNLNSYKHSGLANKKTVTIQ 60

Query: 207 PGDKDXXXXXXXXXXXXXXXPANLRNRTELK 299
            G KD               P++L +++ ++
Sbjct: 61  SGGKDQSVLLATTKTKKQNKPSSLLHKSVMR 91


>gb|EOY27042.1| Ribosomal L28e protein family isoform 1 [Theobroma cacao]
          Length = 227

 Score =  108 bits (269), Expect = 1e-21
 Identities = 53/91 (58%), Positives = 65/91 (71%)
 Frame = +3

Query: 27  MATIPEPLIWEIVKKNNAFLVKQYGSGTNKVVFSREPNNLYNLNSYKHSGLANKKTVSIL 206
           MAT+P  LIWEIVKKNN+FLVKQ+G GT  V FS+EPNNLYNLNSYKHSGLANKKTV+I 
Sbjct: 1   MATVPGQLIWEIVKKNNSFLVKQFGRGTASVQFSKEPNNLYNLNSYKHSGLANKKTVTIQ 60

Query: 207 PGDKDXXXXXXXXXXXXXXXPANLRNRTELK 299
            G KD               P++L +++ ++
Sbjct: 61  SGGKDQSVLLATTKTKKQNKPSSLLHKSVMR 91


>ref|XP_002298257.1| 60S ribosomal protein L28 [Populus trichocarpa]
           gi|118482187|gb|ABK93022.1| unknown [Populus
           trichocarpa] gi|222845515|gb|EEE83062.1| 60S ribosomal
           protein L28 [Populus trichocarpa]
          Length = 146

 Score =  108 bits (269), Expect = 1e-21
 Identities = 54/91 (59%), Positives = 64/91 (70%)
 Frame = +3

Query: 27  MATIPEPLIWEIVKKNNAFLVKQYGSGTNKVVFSREPNNLYNLNSYKHSGLANKKTVSIL 206
           MAT+P  LIWEIVKKNN+FLVKQ+G GT  + FS+E NNLYNLNSYKHSGLANKKTV+I 
Sbjct: 1   MATVPGQLIWEIVKKNNSFLVKQFGRGTASLQFSKENNNLYNLNSYKHSGLANKKTVTIQ 60

Query: 207 PGDKDXXXXXXXXXXXXXXXPANLRNRTELK 299
           P DKD               PA L +++ +K
Sbjct: 61  PADKDQAVVLATTKTKKQNKPAALLHKSVMK 91


>ref|XP_006451378.1| hypothetical protein CICLE_v10009798mg [Citrus clementina]
           gi|567918746|ref|XP_006451379.1| hypothetical protein
           CICLE_v10009798mg [Citrus clementina]
           gi|567918748|ref|XP_006451380.1| hypothetical protein
           CICLE_v10009798mg [Citrus clementina]
           gi|568842926|ref|XP_006475379.1| PREDICTED: 60S
           ribosomal protein L28-1-like isoform X1 [Citrus
           sinensis] gi|568842928|ref|XP_006475380.1| PREDICTED:
           60S ribosomal protein L28-1-like isoform X2 [Citrus
           sinensis] gi|557554604|gb|ESR64618.1| hypothetical
           protein CICLE_v10009798mg [Citrus clementina]
           gi|557554605|gb|ESR64619.1| hypothetical protein
           CICLE_v10009798mg [Citrus clementina]
           gi|557554606|gb|ESR64620.1| hypothetical protein
           CICLE_v10009798mg [Citrus clementina]
          Length = 150

 Score =  107 bits (268), Expect = 1e-21
 Identities = 52/91 (57%), Positives = 64/91 (70%)
 Frame = +3

Query: 27  MATIPEPLIWEIVKKNNAFLVKQYGSGTNKVVFSREPNNLYNLNSYKHSGLANKKTVSIL 206
           MAT+P  LIWEIVKKNN FLVKQ+G G   V FS+EPNNLYNLNS+KHSGLAN+KTV+I 
Sbjct: 1   MATVPGQLIWEIVKKNNCFLVKQFGRGNASVEFSKEPNNLYNLNSFKHSGLANRKTVTIQ 60

Query: 207 PGDKDXXXXXXXXXXXXXXXPANLRNRTELK 299
           PG KD               PA+L +++ ++
Sbjct: 61  PGGKDLSVVLATAKTKKQNKPASLLHKSTMR 91


>gb|EMJ03923.1| hypothetical protein PRUPE_ppa012901mg [Prunus persica]
          Length = 150

 Score =  107 bits (266), Expect = 2e-21
 Identities = 52/91 (57%), Positives = 65/91 (71%)
 Frame = +3

Query: 27  MATIPEPLIWEIVKKNNAFLVKQYGSGTNKVVFSREPNNLYNLNSYKHSGLANKKTVSIL 206
           MAT+P  LIWE+VKKNN+FLVKQ+G G   V FS+EPNNLYNL+SYKHSGLANKKTV+I 
Sbjct: 1   MATVPGQLIWEVVKKNNSFLVKQFGRGNAGVRFSKEPNNLYNLHSYKHSGLANKKTVTIQ 60

Query: 207 PGDKDXXXXXXXXXXXXXXXPANLRNRTELK 299
           PG KD               PA+L +++ ++
Sbjct: 61  PGGKDHSVVLATTKTKKQNKPASLLHKSVIR 91


>gb|EAY88056.1| hypothetical protein OsI_09485 [Oryza sativa Indica Group]
          Length = 147

 Score =  107 bits (266), Expect = 2e-21
 Identities = 53/92 (57%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
 Frame = +3

Query: 27  MATIPEPLIWEIVKKNNAFLVKQYGSGTNKVVFSREPNNLYNLNSYKHSGLANKKTVSIL 206
           MAT+PEPLIWEIVKKNN FLVKQ+G+   KV F++EPNNLYN++SYKHSGLANKKTV+I 
Sbjct: 1   MATVPEPLIWEIVKKNNCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSGLANKKTVTIQ 60

Query: 207 P-GDKDXXXXXXXXXXXXXXXPANLRNRTELK 299
           P G KD               PA L +++ ++
Sbjct: 61  PSGGKDAAVVLSTTKTKKQNAPAKLYHKSVMR 92


>ref|XP_002304107.1| hypothetical protein POPTR_0003s03980g [Populus trichocarpa]
           gi|118481531|gb|ABK92708.1| unknown [Populus
           trichocarpa] gi|222841539|gb|EEE79086.1| hypothetical
           protein POPTR_0003s03980g [Populus trichocarpa]
          Length = 147

 Score =  106 bits (265), Expect = 3e-21
 Identities = 54/91 (59%), Positives = 63/91 (69%)
 Frame = +3

Query: 27  MATIPEPLIWEIVKKNNAFLVKQYGSGTNKVVFSREPNNLYNLNSYKHSGLANKKTVSIL 206
           MAT+P  LIWEIVKKNN FLVKQ+G GT  + FS+E NNLYNLNSYKHSGLANKKTV+I 
Sbjct: 1   MATVPGQLIWEIVKKNNCFLVKQFGRGTASLRFSKESNNLYNLNSYKHSGLANKKTVTIQ 60

Query: 207 PGDKDXXXXXXXXXXXXXXXPANLRNRTELK 299
            GDKD               PA L +++ +K
Sbjct: 61  AGDKDQAVVLATSKTKKQNKPAALFHKSVMK 91


>gb|EEE64545.1| hypothetical protein OsJ_19397 [Oryza sativa Japonica Group]
          Length = 173

 Score =  106 bits (264), Expect = 4e-21
 Identities = 53/92 (57%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
 Frame = +3

Query: 27  MATIPEPLIWEIVKKNNAFLVKQYGSGTNKVVFSREPNNLYNLNSYKHSGLANKKTVSIL 206
           MAT+PEPLIWEIVKKNN FLVKQ+G+   KV F++EPNNLYN++SYKHSGLANKKTV+I 
Sbjct: 1   MATVPEPLIWEIVKKNNCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSGLANKKTVTIQ 60

Query: 207 P-GDKDXXXXXXXXXXXXXXXPANLRNRTELK 299
           P G KD               PA L +++ ++
Sbjct: 61  PSGVKDAAVVLSTTKTKKQNAPAKLYHKSVMR 92


>gb|EAY98875.1| hypothetical protein OsI_20825 [Oryza sativa Indica Group]
          Length = 154

 Score =  106 bits (264), Expect = 4e-21
 Identities = 53/92 (57%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
 Frame = +3

Query: 27  MATIPEPLIWEIVKKNNAFLVKQYGSGTNKVVFSREPNNLYNLNSYKHSGLANKKTVSIL 206
           MAT+PEPLIWEIVKKNN FLVKQ+G+   KV F++EPNNLYN++SYKHSGLANKKTV+I 
Sbjct: 1   MATVPEPLIWEIVKKNNCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSGLANKKTVTIQ 60

Query: 207 P-GDKDXXXXXXXXXXXXXXXPANLRNRTELK 299
           P G KD               PA L +++ ++
Sbjct: 61  PSGVKDAAVVLSTTKTKKQNAPAKLYHKSVMR 92


>gb|AAV67825.1| putative 60S ribosomal L28 protein [Oryza sativa Japonica Group]
           gi|215694857|dbj|BAG90048.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 133

 Score =  106 bits (264), Expect = 4e-21
 Identities = 53/92 (57%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
 Frame = +3

Query: 27  MATIPEPLIWEIVKKNNAFLVKQYGSGTNKVVFSREPNNLYNLNSYKHSGLANKKTVSIL 206
           MAT+PEPLIWEIVKKNN FLVKQ+G+   KV F++EPNNLYN++SYKHSGLANKKTV+I 
Sbjct: 1   MATVPEPLIWEIVKKNNCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSGLANKKTVTIQ 60

Query: 207 P-GDKDXXXXXXXXXXXXXXXPANLRNRTELK 299
           P G KD               PA L +++ ++
Sbjct: 61  PSGVKDAAVVLSTTKTKKQNAPAKLYHKSVMR 92


>pdb|3J61|RR Chain r, Localization Of The Large Subunit Ribosomal Proteins Into
           A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s
           Ribosome gi|55908881|gb|AAV67824.1| putative 60S
           ribosomal L28 protein [Oryza sativa Japonica Group]
           gi|149390813|gb|ABR25424.1| 60S ribosomal protein l28
           [Oryza sativa Indica Group]
          Length = 147

 Score =  106 bits (264), Expect = 4e-21
 Identities = 53/92 (57%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
 Frame = +3

Query: 27  MATIPEPLIWEIVKKNNAFLVKQYGSGTNKVVFSREPNNLYNLNSYKHSGLANKKTVSIL 206
           MAT+PEPLIWEIVKKNN FLVKQ+G+   KV F++EPNNLYN++SYKHSGLANKKTV+I 
Sbjct: 1   MATVPEPLIWEIVKKNNCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSGLANKKTVTIQ 60

Query: 207 P-GDKDXXXXXXXXXXXXXXXPANLRNRTELK 299
           P G KD               PA L +++ ++
Sbjct: 61  PSGVKDAAVVLSTTKTKKQNAPAKLYHKSVMR 92