BLASTX nr result

ID: Zingiber23_contig00003003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00003003
         (264 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG27431.1| QM-like protein [Elaeis guineensis]                     57   3e-06
ref|XP_003523292.1| PREDICTED: 60S ribosomal protein L10 [Glycin...    56   6e-06
ref|NP_001238332.1| uncharacterized protein LOC100499685 [Glycin...    56   6e-06

>gb|AAG27431.1| QM-like protein [Elaeis guineensis]
          Length = 224

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/34 (76%), Positives = 28/34 (82%)
 Frame = -3

Query: 262 VPDGVNAKLLGCHGKLSKRQPGGAFLQSAVAKAS 161
           VPDGVNAKLLGCHG+LS RQPG AFL   +A AS
Sbjct: 191 VPDGVNAKLLGCHGRLSARQPGRAFLPPTIANAS 224


>ref|XP_003523292.1| PREDICTED: 60S ribosomal protein L10 [Glycine max]
          Length = 223

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/33 (78%), Positives = 27/33 (81%)
 Frame = -3

Query: 262 VPDGVNAKLLGCHGKLSKRQPGGAFLQSAVAKA 164
           VPDGVNAKLLGCHG L+ RQPG AFL SA A A
Sbjct: 191 VPDGVNAKLLGCHGPLANRQPGQAFLSSATATA 223


>ref|NP_001238332.1| uncharacterized protein LOC100499685 [Glycine max]
           gi|255625765|gb|ACU13227.1| unknown [Glycine max]
          Length = 223

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/33 (78%), Positives = 27/33 (81%)
 Frame = -3

Query: 262 VPDGVNAKLLGCHGKLSKRQPGGAFLQSAVAKA 164
           VPDGVNAKLLGCHG L+ RQPG AFL SA A A
Sbjct: 191 VPDGVNAKLLGCHGPLANRQPGQAFLSSATATA 223


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