BLASTX nr result

ID: Zingiber23_contig00002993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00002993
         (660 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519274.1| RNA binding protein, putative [Ricinus commu...    59   1e-06
ref|XP_006337998.1| PREDICTED: uncharacterized protein LOC102593...    58   3e-06
ref|XP_006337997.1| PREDICTED: uncharacterized protein LOC102593...    58   3e-06
ref|XP_006337996.1| PREDICTED: uncharacterized protein LOC102593...    58   3e-06
gb|EMJ21726.1| hypothetical protein PRUPE_ppa009113mg [Prunus pe...    58   3e-06

>ref|XP_002519274.1| RNA binding protein, putative [Ricinus communis]
           gi|223541589|gb|EEF43138.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 524

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 1/149 (0%)
 Frame = +3

Query: 6   VDVQYMRPCQLNAILVKDFAPRDEVEVPLHGGWVLGEISDVLKGSRCIVKVRDSRSEMVF 185
           +  ++ RPC         F   ++V+V  + GW  G++S+VL GS+ +V  R +  E+ F
Sbjct: 231 ISAEHARPCPPPIPSDAGFKEFEKVDVWFNEGWWEGQVSEVLPGSKYMVYFRSTNEELEF 290

Query: 186 DLHQLRHSQCWDGQRWVFTFQQKTRKSQGSSVSGNQNPRSQKRCSRLSSSTTSK-GEVEA 362
           D   LRH Q W   +WV     K + S+ S V+   +    + C R   +  SK   V  
Sbjct: 291 DHSSLRHHQKWIDGKWV-QRNPKAQFSKESMVAVKSDEIDFQYCKRNPKAQFSKESMVAV 349

Query: 363 SSEPGGFKLNLKHKKTNVLSGPSQNSKKL 449
            S+  GF+ + +  K     G +  S ++
Sbjct: 350 KSDDVGFQCDKRTPKAQFSKGTAVKSDEV 378


>ref|XP_006337998.1| PREDICTED: uncharacterized protein LOC102593605 isoform X3 [Solanum
           tuberosum]
          Length = 724

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
 Frame = +3

Query: 6   VDVQYMRPCQLNAILVKDFAPRDEVEVPLHGGWVLGEISDVLKGSRCIVKVRDSRSEMVF 185
           VD   +RPC         F   D V+  L+ GW  G I +VL G + IV +  +  E+VF
Sbjct: 317 VDASCIRPCPPEIQSFHQFEHLDRVDAWLNDGWWEGHIKEVLGGLKYIVCLTTTEEELVF 376

Query: 186 DLHQLRHSQCWDGQRWVFTFQQ--KTRKSQGSSVSGNQNPRSQKRCSRLSSSTTSKG-EV 356
           +   LR  Q W  ++W FT ++  KTR S   ++   +     K   R S    SKG  V
Sbjct: 377 EHSMLRPRQEWVKEKW-FTAREFDKTRSSSDMTLKSKELKIRIKCSGRTSKPKFSKGMRV 435

Query: 357 EASSEPGGFK 386
           E  S+  G++
Sbjct: 436 EVRSDEEGYQ 445


>ref|XP_006337997.1| PREDICTED: uncharacterized protein LOC102593605 isoform X2 [Solanum
           tuberosum]
          Length = 725

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
 Frame = +3

Query: 6   VDVQYMRPCQLNAILVKDFAPRDEVEVPLHGGWVLGEISDVLKGSRCIVKVRDSRSEMVF 185
           VD   +RPC         F   D V+  L+ GW  G I +VL G + IV +  +  E+VF
Sbjct: 317 VDASCIRPCPPEIQSFHQFEHLDRVDAWLNDGWWEGHIKEVLGGLKYIVCLTTTEEELVF 376

Query: 186 DLHQLRHSQCWDGQRWVFTFQQ--KTRKSQGSSVSGNQNPRSQKRCSRLSSSTTSKG-EV 356
           +   LR  Q W  ++W FT ++  KTR S   ++   +     K   R S    SKG  V
Sbjct: 377 EHSMLRPRQEWVKEKW-FTAREFDKTRSSSDMTLKSKELKIRIKCSGRTSKPKFSKGMRV 435

Query: 357 EASSEPGGFK 386
           E  S+  G++
Sbjct: 436 EVRSDEEGYQ 445


>ref|XP_006337996.1| PREDICTED: uncharacterized protein LOC102593605 isoform X1 [Solanum
           tuberosum]
          Length = 736

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
 Frame = +3

Query: 6   VDVQYMRPCQLNAILVKDFAPRDEVEVPLHGGWVLGEISDVLKGSRCIVKVRDSRSEMVF 185
           VD   +RPC         F   D V+  L+ GW  G I +VL G + IV +  +  E+VF
Sbjct: 317 VDASCIRPCPPEIQSFHQFEHLDRVDAWLNDGWWEGHIKEVLGGLKYIVCLTTTEEELVF 376

Query: 186 DLHQLRHSQCWDGQRWVFTFQQ--KTRKSQGSSVSGNQNPRSQKRCSRLSSSTTSKG-EV 356
           +   LR  Q W  ++W FT ++  KTR S   ++   +     K   R S    SKG  V
Sbjct: 377 EHSMLRPRQEWVKEKW-FTAREFDKTRSSSDMTLKSKELKIRIKCSGRTSKPKFSKGMRV 435

Query: 357 EASSEPGGFK 386
           E  S+  G++
Sbjct: 436 EVRSDEEGYQ 445


>gb|EMJ21726.1| hypothetical protein PRUPE_ppa009113mg [Prunus persica]
          Length = 306

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 28/81 (34%), Positives = 45/81 (55%)
 Frame = +3

Query: 6   VDVQYMRPCQLNAILVKDFAPRDEVEVPLHGGWVLGEISDVLKGSRCIVKVRDSRSEMVF 185
           VD Q++RPC    ++V+ F+  +EV+   + GW  G I  VL+G R  V  + ++ E++F
Sbjct: 222 VDAQHIRPCPPETVVVESFSLNEEVDAFYNDGWWEGVIRKVLRGPRYRVYFKGTKDELLF 281

Query: 186 DLHQLRHSQCWDGQRWVFTFQ 248
           +   LR  Q W  + WV   Q
Sbjct: 282 EHSDLRPRQDWIDRTWVMASQ 302


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