BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00002774
         (1204 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004967186.1| PREDICTED: DNA-directed RNA polymerase I sub...   283   1e-73
dbj|BAD35511.1| putative RNA polymerase A(I) large subunit [Oryz...   275   3e-71
ref|NP_001058063.2| Os06g0612200 [Oryza sativa Japonica Group] g...   271   5e-70
tpg|DAA45225.1| TPA: putative DNA-directed RNA polymerase family...   267   7e-69
ref|XP_006656244.1| PREDICTED: DNA-directed RNA polymerase I sub...   266   2e-68
ref|XP_002440175.1| hypothetical protein SORBIDRAFT_09g027230 [S...   252   2e-64
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub...   246   1e-62
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   246   1e-62
ref|XP_004299740.1| PREDICTED: DNA-directed RNA polymerase I sub...   246   2e-62
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub...   243   1e-61
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              237   6e-60
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...   237   6e-60
ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub...   237   8e-60
gb|EEE66009.1| hypothetical protein OsJ_21960 [Oryza sativa Japo...   234   4e-59
gb|EMJ04262.1| hypothetical protein PRUPE_ppa000153mg [Prunus pe...   234   7e-59
ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Popu...   233   1e-58
ref|XP_002308050.1| predicted protein [Populus trichocarpa]           233   1e-58
ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citr...   233   2e-58
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...   230   8e-58
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   229   2e-57

>ref|XP_004967186.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Setaria
            italica]
          Length = 1682

 Score =  283 bits (724), Expect = 1e-73
 Identities = 158/348 (45%), Positives = 207/348 (59%), Gaps = 1/348 (0%)
 Frame = -2

Query: 1182 GTGAKKSK-QARDEVEYEDGIENEKFAATAGEHDDEIRSGFESGVDQIEEDEDYVMGGEN 1006
            GT A+K K Q RDE+EY+D  ENE+      E ++E +   +S  D  E  +D     E 
Sbjct: 1353 GTDAEKRKRQERDEMEYDDDTENEE--GMDSESEEETKVKHQSEEDPAESGDDLQEADEE 1410

Query: 1005 PPDSDTDTEAPETPTKGHSTPMPVDSKKSKFTNKGEESLSKAESTTVSXXXXXXXXXXXX 826
               S +D  + +         M   +KK K +    E+    E T               
Sbjct: 1411 HKTSKSDMTSVDD--------MSYSAKKVKKSKDKHETAKLQERTHTEGKSDERKQDQMT 1462

Query: 825  XXXXXXXXXXXXXXXXXXXXXXXXKFEGLNFEVQFVFRKEPRILLAEIAQKTSKCVYVKQ 646
                                      + L+FE+ + F  EP ILLA+IAQKT++ ++V+ 
Sbjct: 1463 YKRKKKLKRTVHVES-----------KDLDFEIHYAFCDEPHILLAQIAQKTARSIFVRA 1511

Query: 645  CKNIDKCTVKENKNNTDPFTLQIAGVDFATLWNLYEHLDVNQIYTNDVHAMLNTYGVEAA 466
            CKNIDKC V+E K       L+ +GV+F   WNL +++ +N+I TND+HAML TYGVEAA
Sbjct: 1512 CKNIDKCEVEEKKEKGSSAVLKTSGVNFEVFWNLRKYISINKITTNDIHAMLKTYGVEAA 1571

Query: 465  RATIIKEVTNVFGLYGINVNIRHLSLIADFMTFHGGYRPMNRLGMAGFNTSPFGRMTFET 286
            RATII+EV +VFG+YGI V+ RHLS+IADFMTF GGYRPMNRLGM  F+TSPFG+MTFET
Sbjct: 1572 RATIIEEVNHVFGVYGIKVDPRHLSMIADFMTFDGGYRPMNRLGMGQFSTSPFGKMTFET 1631

Query: 285  ATKFIVESALHGEVDTLESPSASVCLGQPVKYGTGCFDLMQNLPM*GP 142
            ATKFIV++A HGE D+LE PSAS+CLG+P K GTG F L+QNL +  P
Sbjct: 1632 ATKFIVDAATHGESDSLECPSASICLGKPAKVGTGTFGLLQNLALEQP 1679


>dbj|BAD35511.1| putative RNA polymerase A(I) large subunit [Oryza sativa Japonica
            Group]
          Length = 1748

 Score =  275 bits (703), Expect = 3e-71
 Identities = 157/358 (43%), Positives = 219/358 (61%), Gaps = 16/358 (4%)
 Frame = -2

Query: 1167 KSKQARDEVEYEDGIENEKFAATAGEHDDEIRSGFESG----VDQIEEDEDYVMGGENPP 1000
            +S+++    E E+G  +E    + GE++D++ +  E      +D++E D+D         
Sbjct: 1397 ESQRSDGVEESENGPTDEDNGVSDGENEDDLGADAEKWKRQEIDEMEYDDDAEKEEGFDM 1456

Query: 999  DSDTDTEAPETP-TKGHSTPMPVDSKKSK------FTNKGEESLSKAESTTVSXXXXXXX 841
            DS+++ +    P ++ H   +  + ++S+       +NKGE   +K  +  +        
Sbjct: 1457 DSESEEDTKSKPESEDHQAKLDEELEESEEGHVLDSSNKGENLKAKQATARLEDEMNEAE 1516

Query: 840  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFEGLNFEVQFVFRKEPRILLAEIAQKTSKC 661
                                            GLNFEV +  +++P ILLA+IAQ+T++ 
Sbjct: 1517 DEKAQVTIKFKKNIKWTIHYEST---------GLNFEVHYALQEQPHILLAQIAQRTARS 1567

Query: 660  VYVKQCKNIDKCTVKENK---NNT--DPFTLQIAGVDFATLWNLYEHLDVNQIYTNDVHA 496
            V+VK CKNID+C V + K   NNT   P TLQ AGV+F     L ++LD+N++ +ND+HA
Sbjct: 1568 VFVKACKNIDRCEVNKPKKIDNNTINTPITLQTAGVNFEVFHKLVDYLDINEVRSNDIHA 1627

Query: 495  MLNTYGVEAARATIIKEVTNVFGLYGINVNIRHLSLIADFMTFHGGYRPMNRLGMAGFNT 316
            MLNTYGVEAARATII EV  VFG YGI+V++RHL+LIADFMTF GGYRPM+RLGM  F+T
Sbjct: 1628 MLNTYGVEAARATIIGEVKGVFGAYGIHVDMRHLNLIADFMTFDGGYRPMSRLGMGQFST 1687

Query: 315  SPFGRMTFETATKFIVESALHGEVDTLESPSASVCLGQPVKYGTGCFDLMQNLPM*GP 142
            SPFG+MTFETATKFIVE+A HGE DTL+ PSASVCLG+PVK GTG F L+QN  +  P
Sbjct: 1688 SPFGKMTFETATKFIVEAASHGESDTLDGPSASVCLGKPVKVGTGSFGLLQNFSLEQP 1745


>ref|NP_001058063.2| Os06g0612200 [Oryza sativa Japonica Group]
           gi|255677221|dbj|BAF19977.2| Os06g0612200 [Oryza sativa
           Japonica Group]
          Length = 237

 Score =  271 bits (692), Expect = 5e-70
 Identities = 134/206 (65%), Positives = 165/206 (80%), Gaps = 5/206 (2%)
 Frame = -2

Query: 744 GLNFEVQFVFRKEPRILLAEIAQKTSKCVYVKQCKNIDKCTVKENK---NNT--DPFTLQ 580
           GLNFEV +  +++P ILLA+IAQ+T++ V+VK CKNID+C V + K   NNT   P TLQ
Sbjct: 29  GLNFEVHYALQEQPHILLAQIAQRTARSVFVKACKNIDRCEVNKPKKIDNNTINTPITLQ 88

Query: 579 IAGVDFATLWNLYEHLDVNQIYTNDVHAMLNTYGVEAARATIIKEVTNVFGLYGINVNIR 400
            AGV+F     L ++LD+N++ +ND+HAMLNTYGVEAARATII EV  VFG YGI+V++R
Sbjct: 89  TAGVNFEVFHKLVDYLDINEVRSNDIHAMLNTYGVEAARATIIGEVKGVFGAYGIHVDMR 148

Query: 399 HLSLIADFMTFHGGYRPMNRLGMAGFNTSPFGRMTFETATKFIVESALHGEVDTLESPSA 220
           HL+LIADFMTF GGYRPM+RLGM  F+TSPFG+MTFETATKFIVE+A HGE DTL+ PSA
Sbjct: 149 HLNLIADFMTFDGGYRPMSRLGMGQFSTSPFGKMTFETATKFIVEAASHGESDTLDGPSA 208

Query: 219 SVCLGQPVKYGTGCFDLMQNLPM*GP 142
           SVCLG+PVK GTG F L+QN  +  P
Sbjct: 209 SVCLGKPVKVGTGSFGLLQNFSLEQP 234


>tpg|DAA45225.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
          Length = 382

 Score =  267 bits (682), Expect = 7e-69
 Identities = 157/349 (44%), Positives = 203/349 (58%), Gaps = 2/349 (0%)
 Frame = -2

Query: 1182 GTGAKKSK-QARDEVEYEDGIENEKFAATAGEHDDEIRSGFESGVDQIEEDEDYVMGGEN 1006
            GT A+K K Q +DE+EY+D  E E+   +  E  DE  +  ESG D  E D+++ +    
Sbjct: 63   GTDAEKMKRQEKDEMEYDDDTETEEGMGSESEESDEDPA--ESGDDSQEADKEHTISKSE 120

Query: 1005 PPDSDTDTEAPETPTKGHSTPMPVDSKKSKFTNKGEESLSKAESTTVSXXXXXXXXXXXX 826
                D   + P +  KG  +     + K +  N+ E  L   +   +             
Sbjct: 121  TTSVD---DLPYSVKKGKKSKDDRGTAKLEEKNQNEGRLDDQKQGQIKKRRKKLKHTIHV 177

Query: 825  XXXXXXXXXXXXXXXXXXXXXXXXKFEGLNFEVQFVFRKEPRILLAEIAQKTSKCVYVKQ 646
                                        L+FE+ + F  EP ILLA+IA+K ++ + VK 
Sbjct: 178  ES------------------------SDLDFEIHYAFHDEPHILLAQIAKKIARTILVKA 213

Query: 645  CKNIDKCT-VKENKNNTDPFTLQIAGVDFATLWNLYEHLDVNQIYTNDVHAMLNTYGVEA 469
            C NID C  VK   N+T    L+ AGV+F  +WNL E++ VN I +ND+HAML TYGVEA
Sbjct: 214  CNNIDHCKIVKPMHNHT---RLETAGVNFEVVWNLSEYISVNDITSNDIHAMLKTYGVEA 270

Query: 468  ARATIIKEVTNVFGLYGINVNIRHLSLIADFMTFHGGYRPMNRLGMAGFNTSPFGRMTFE 289
            AR TIIKEV+ VF  YGINV++RHLSLIADFMT  GGYRPMNRLG+  F+TSPFG+MTFE
Sbjct: 271  ARGTIIKEVSGVFEPYGINVDMRHLSLIADFMTLDGGYRPMNRLGIGQFSTSPFGKMTFE 330

Query: 288  TATKFIVESALHGEVDTLESPSASVCLGQPVKYGTGCFDLMQNLPM*GP 142
            TATKFIV++A HGE D LE PSASVCLG+P K GTG F L+QNL +  P
Sbjct: 331  TATKFIVDAATHGEADFLECPSASVCLGKPPKVGTGIFGLLQNLELEQP 379


>ref|XP_006656244.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Oryza
            brachyantha]
          Length = 1755

 Score =  266 bits (679), Expect = 2e-68
 Identities = 156/351 (44%), Positives = 205/351 (58%), Gaps = 10/351 (2%)
 Frame = -2

Query: 1182 GTGAKKSKQAR-DEVEYEDGIENEKFAATAGEHDDEIRSGFESGVDQIEEDEDYVMGGEN 1006
            G  A+K KQ   DE+EY+D  E E+ +    E +D+ +   ES      ED+   +G   
Sbjct: 1436 GADAQKWKQQEIDEMEYDDDAEKEESSDMDSESEDDTKFKPES------EDDRPKLG--- 1486

Query: 1005 PPDSDTDTEAPETPTKGHSTPMPVDSKKSKFTN-----KGEESLSKAESTTVSXXXXXXX 841
                    E  E   +GH        K SK T      + E +    E   V+       
Sbjct: 1487 --------EELEETEEGHVLDSSYKGKNSKATQATARLQDERNKVADEKAQVTIKFKKNI 1538

Query: 840  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFEGLNFEVQFVFRKEPRILLAEIAQKTSKC 661
                                            GLNFEV +  +++P ILLA+IAQ+T++ 
Sbjct: 1539 KWTIHYEST-----------------------GLNFEVHYALQEQPHILLAQIAQRTARS 1575

Query: 660  VYVKQCKNIDKCTVKENKNNTDPF----TLQIAGVDFATLWNLYEHLDVNQIYTNDVHAM 493
            V++K C NID+CTV +   ++D       LQ  GV+F   WNL ++LD+N++ +ND++A+
Sbjct: 1576 VFIKACSNIDQCTVNKIDVDSDKIDEAIVLQTVGVNFGVFWNLVDYLDINEVRSNDIYAV 1635

Query: 492  LNTYGVEAARATIIKEVTNVFGLYGINVNIRHLSLIADFMTFHGGYRPMNRLGMAGFNTS 313
            L TYGVEAARATII+EV+ VFG YGI+VN RHLSLIADFMTF GGYRPM+R GM  F+TS
Sbjct: 1636 LKTYGVEAARATIIEEVSGVFGAYGIDVNKRHLSLIADFMTFDGGYRPMSRNGMGQFSTS 1695

Query: 312  PFGRMTFETATKFIVESALHGEVDTLESPSASVCLGQPVKYGTGCFDLMQN 160
            PFG+MTFETATKFIVE+A HGE DTL+SPSAS+CLG+PVK GTG F L+QN
Sbjct: 1696 PFGKMTFETATKFIVEAASHGESDTLDSPSASICLGKPVKMGTGTFGLLQN 1746


>ref|XP_002440175.1| hypothetical protein SORBIDRAFT_09g027230 [Sorghum bicolor]
            gi|241945460|gb|EES18605.1| hypothetical protein
            SORBIDRAFT_09g027230 [Sorghum bicolor]
          Length = 311

 Score =  252 bits (643), Expect = 2e-64
 Identities = 145/342 (42%), Positives = 196/342 (57%), Gaps = 2/342 (0%)
 Frame = -2

Query: 1161 KQARDEVEYEDGIENEKFAATAGEHDDEIRSGFESGVDQIEEDEDYVMGGENPPDSDTDT 982
            +Q +DE+EY+D  ENE+   +  E  D+  +G +S     E D+++ +  E     D   
Sbjct: 3    RQEKDEMEYDDDTENEEGMGSESEESDDDPAGDDSQ----EADKEHKIKSETTSVDDLSY 58

Query: 981  EAPETPTK--GHSTPMPVDSKKSKFTNKGEESLSKAESTTVSXXXXXXXXXXXXXXXXXX 808
             A +       H T       + K  NKG     K +  T                    
Sbjct: 59   SAKKGKKSKDNHGTA----KLEEKNQNKGRLGDQKQDQITKRRKKLTRTIHVES------ 108

Query: 807  XXXXXXXXXXXXXXXXXXKFEGLNFEVQFVFRKEPRILLAEIAQKTSKCVYVKQCKNIDK 628
                                  L+FE+ + F  EP ILLA+IA+K ++ ++VK C NID 
Sbjct: 109  --------------------NDLDFEIHYAFLDEPHILLAQIAKKIARTIFVKACNNIDD 148

Query: 627  CTVKENKNNTDPFTLQIAGVDFATLWNLYEHLDVNQIYTNDVHAMLNTYGVEAARATIIK 448
            C + + ++  D   +Q AGV+F  +WNL E++ V+ I +ND+HA+L TYGVEAAR TII 
Sbjct: 149  CKIVKPRD--DHARIQTAGVNFEVVWNLNEYISVHDITSNDIHAILKTYGVEAARNTIIN 206

Query: 447  EVTNVFGLYGINVNIRHLSLIADFMTFHGGYRPMNRLGMAGFNTSPFGRMTFETATKFIV 268
            EV+ VF  YGI+V++RHLS+IADFMT  GGYRPMNR+G+  F+TSPFG+MTFETATKFIV
Sbjct: 207  EVSGVFKPYGIDVDMRHLSMIADFMTLDGGYRPMNRIGIGQFSTSPFGKMTFETATKFIV 266

Query: 267  ESALHGEVDTLESPSASVCLGQPVKYGTGCFDLMQNLPM*GP 142
            E+A HGE D LE PSASVCLG+P K GTG F L+QNL +  P
Sbjct: 267  EAATHGEADFLECPSASVCLGKPPKVGTGIFGLLQNLELEQP 308


>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            tuberosum]
          Length = 1675

 Score =  246 bits (629), Expect = 1e-62
 Identities = 149/357 (41%), Positives = 200/357 (56%), Gaps = 19/357 (5%)
 Frame = -2

Query: 1170 KKSKQARDEVEYEDGIENEKFAATAGEHDDEIRSGFESGVDQIEEDEDYVMGGENPPDSD 991
            K+ +Q  DE++Y+D  ENE  A T  E +DE +S     +D  +E+E    G E      
Sbjct: 1355 KRKQQTTDEMDYDDD-ENEDEAETTAEIEDE-KSEQTDEIDNGDEEEIGNRGNEEQMSKL 1412

Query: 990  TDTEAPETPTKGHSTPMPVDSKKSKFTNKGEESLSKAESTTVSXXXXXXXXXXXXXXXXX 811
              TE   + TK  S+     +K +   NK +E  SK +S                     
Sbjct: 1413 QSTEDDISNTK--SSKSKTKTKTTVKQNKKKERRSKKDSDRC------------------ 1452

Query: 810  XXXXXXXXXXXXXXXXXXXKFEGLNFEVQFVFRKEPRILLAEIAQKTSKCVYVKQCKNID 631
                                 EGL+FEV F F  EP ILLA++AQKT+K VY+K    ID
Sbjct: 1453 ----------------VFVDVEGLHFEVHFRFVNEPHILLAQVAQKTAKKVYIKNSGKID 1496

Query: 630  KCTV-----------------KENKNNTDP--FTLQIAGVDFATLWNLYEHLDVNQIYTN 508
            +C +                 K+   ++D   + L+ AGVDF T W + + LDV +IYTN
Sbjct: 1497 QCRMVKYEVTENTVMWDEYQTKQQSQDSDSAYWALKAAGVDFGTFWEMQDDLDVTRIYTN 1556

Query: 507  DVHAMLNTYGVEAARATIIKEVTNVFGLYGINVNIRHLSLIADFMTFHGGYRPMNRLGMA 328
            ++ AMLNTYGVEAARA+I++EV  VFG+YG+ ++ RHLSLIADFMT  GGY+PM+R G  
Sbjct: 1557 NIRAMLNTYGVEAARASILREVKTVFGIYGVEIDFRHLSLIADFMTHTGGYQPMSRHGSI 1616

Query: 327  GFNTSPFGRMTFETATKFIVESALHGEVDTLESPSASVCLGQPVKYGTGCFDLMQNL 157
              + SPF +M+FETA+KFIVE+A HG  D LE+PS+ +CLG PVK GTGCFD+MQ L
Sbjct: 1617 SESLSPFLKMSFETASKFIVEAAAHGLTDNLETPSSRICLGLPVKMGTGCFDIMQKL 1673


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score =  246 bits (628), Expect = 1e-62
 Identities = 156/364 (42%), Positives = 200/364 (54%), Gaps = 22/364 (6%)
 Frame = -2

Query: 1182 GTGAKKSK-QARDEVEYEDGIENEKFAATAGEHDDEIRSGFESGVDQIEEDEDYVMGGEN 1006
            G  A+K K QA DE++Y+DG E E     +   ++E  SGFES +DQ + +       E 
Sbjct: 1351 GLDAQKRKLQATDEMDYDDGFEEELNEGESTASEEE--SGFESEIDQGDNET------EI 1402

Query: 1005 PPDSDTDTEAPET-PTKGHSTPMPVDSKKSKFTNKGEESLSKAESTTVSXXXXXXXXXXX 829
              D   D EA ET P +  S P     K ++  + GE+S  K +                
Sbjct: 1403 SNDVMLDNEASETLPLRKPSKPKS-KKKAAESPSHGEKSKDKKKKPKAKRKSRISKDFDR 1461

Query: 828  XXXXXXXXXXXXXXXXXXXXXXXXXKFEGLNFEVQFVFRKEPRILLAEIAQKTSKCVYVK 649
                                         ++FEV F F  EP ILLAEIAQKT+K VY++
Sbjct: 1462 AIFVEARK---------------------MHFEVHFKFTNEPHILLAEIAQKTAKKVYIQ 1500

Query: 648  QCKNIDKCTVKENKNNT------DPF--------------TLQIAGVDFATLWNLYEHLD 529
                I++C V + K +       DP                L   GVDF T W + +HLD
Sbjct: 1501 NPGKIEQCRVTDCKESQVIYYGKDPKERVDLKPDVKEKVPALHATGVDFNTFWKMQDHLD 1560

Query: 528  VNQIYTNDVHAMLNTYGVEAARATIIKEVTNVFGLYGINVNIRHLSLIADFMTFHGGYRP 349
            V  IY+N++HAML TYGVEAAR TII+E+ +VF  YGI V+ RHLSLIADFMT  GGYRP
Sbjct: 1561 VRYIYSNNIHAMLKTYGVEAARETIIREINHVFKSYGIAVSNRHLSLIADFMTHTGGYRP 1620

Query: 348  MNRLGMAGFNTSPFGRMTFETATKFIVESALHGEVDTLESPSASVCLGQPVKYGTGCFDL 169
            M+R+G    + SPF +M+FETA+KFIVE+ALHGE+D LE+PSA +CLG PVK GTG FDL
Sbjct: 1621 MSRMGGIAESISPFSKMSFETASKFIVEAALHGEIDNLETPSARICLGLPVKMGTGSFDL 1680

Query: 168  MQNL 157
            MQ L
Sbjct: 1681 MQKL 1684


>ref|XP_004299740.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Fragaria
            vesca subsp. vesca]
          Length = 1673

 Score =  246 bits (627), Expect = 2e-62
 Identities = 153/366 (41%), Positives = 195/366 (53%), Gaps = 28/366 (7%)
 Frame = -2

Query: 1170 KKSKQARDEVEYEDGIENEKFAATAGEHDDEIRSGFESGVDQIEEDEDYVMGGENPPDSD 991
            K+ +Q  DE+EY+D  E+E      G   DE  +  ++G   +E D+D V G  +  D  
Sbjct: 1347 KQKRQGTDEMEYDDDWEDE---FNEGRQSDEFENEIDNGELDVEIDKDGVTGISDANDKM 1403

Query: 990  TDTEAPETPTKGHSTPMPVDSKKSKFTNKGEESLSKAE---STTVSXXXXXXXXXXXXXX 820
             ++ +    +K HS      S+  K   K    L + E   +T VS              
Sbjct: 1404 QESCSTGGISKPHSKGKKTKSR-DKIKKKTSAKLVRKEYDRATFVSA------------- 1449

Query: 819  XXXXXXXXXXXXXXXXXXXXXXKFEGLNFEVQFVFRKEPRILLAEIAQKTSKCVYVKQCK 640
                                    +G +FE+ F F  EP ILL +IAQKT++ VYVK   
Sbjct: 1450 ------------------------KGFHFEIHFKFTNEPHILLDQIAQKTARNVYVKSSG 1485

Query: 639  NIDKCTVKENKNNTDPF-------------------------TLQIAGVDFATLWNLYEH 535
            NI  C   +   N D                            LQ AGVDFATLW L + 
Sbjct: 1486 NILDCQDIDIYGNEDQVFCCWNDPRNKLSGEKNPSEEEKKMRALQTAGVDFATLWKLQDD 1545

Query: 534  LDVNQIYTNDVHAMLNTYGVEAARATIIKEVTNVFGLYGINVNIRHLSLIADFMTFHGGY 355
            LDVN IY+N++HAMLNTYGVEAAR TIIKE++NVF +YGI+VNIRHL LIAD+MT  G Y
Sbjct: 1546 LDVNYIYSNNIHAMLNTYGVEAARETIIKEISNVFKVYGISVNIRHLLLIADYMTRSGSY 1605

Query: 354  RPMNRLGMAGFNTSPFGRMTFETATKFIVESALHGEVDTLESPSASVCLGQPVKYGTGCF 175
            RPMNR G    +TSP  +M+FETA+KFI E+A HGE D LE+PSA +CLG PVK GTGCF
Sbjct: 1606 RPMNRFGGIAESTSPMNKMSFETASKFIQEAAYHGEKDDLETPSARICLGLPVKVGTGCF 1665

Query: 174  DLMQNL 157
            DLM  +
Sbjct: 1666 DLMHKM 1671


>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            lycopersicum]
          Length = 1677

 Score =  243 bits (619), Expect = 1e-61
 Identities = 144/359 (40%), Positives = 196/359 (54%), Gaps = 21/359 (5%)
 Frame = -2

Query: 1170 KKSKQARDEVEYEDGIENEKFAATAGEHDDEIRSGFESGVDQIEEDEDYVMGGENPPDS- 994
            K+ +Q  DE++Y+D  +  +  A A    ++ +S     +D  +E+E+   G E      
Sbjct: 1357 KRKQQTTDEMDYDDDEDEAEAEAEATAEIEDEKSEQTDEIDNGDEEENGDRGNEEHTSKL 1416

Query: 993  -DTDTEAPETPTKGHSTPMPVDSKKSKFTNKGEESLSKAESTTVSXXXXXXXXXXXXXXX 817
              T+ +   T T    T   V  KK K      E  SK +S                   
Sbjct: 1417 QSTEEDISNTKTSKSKTKTTVKQKKKK------ERRSKKDSDRC---------------- 1454

Query: 816  XXXXXXXXXXXXXXXXXXXXXKFEGLNFEVQFVFRKEPRILLAEIAQKTSKCVYVKQCKN 637
                                   EGL+FEV F F  EP ILLA++AQKT+K VYVK    
Sbjct: 1455 ------------------VFVDVEGLHFEVHFRFVNEPHILLAQVAQKTAKKVYVKNSGK 1496

Query: 636  IDKCTV-----------------KENKNNTDP--FTLQIAGVDFATLWNLYEHLDVNQIY 514
            ID+C +                 K+ + ++D   + L+ AGVDF T W + + LDV +IY
Sbjct: 1497 IDQCRMVKYEVTENTVMWDENQTKQQRQDSDSAYWALKAAGVDFGTFWEMQDDLDVTRIY 1556

Query: 513  TNDVHAMLNTYGVEAARATIIKEVTNVFGLYGINVNIRHLSLIADFMTFHGGYRPMNRLG 334
            TN++ AMLNTYGVEAARA+I++EV  VFG+YG+ ++ RHLSLIADFMT  GGY+PM+R G
Sbjct: 1557 TNNIRAMLNTYGVEAARASILREVKTVFGIYGVEIDFRHLSLIADFMTHTGGYQPMSRHG 1616

Query: 333  MAGFNTSPFGRMTFETATKFIVESALHGEVDTLESPSASVCLGQPVKYGTGCFDLMQNL 157
                + SPF +M+FETA+KFIVE+A HG  D LE+PS+ +CLG PVK GTGCFD+MQ L
Sbjct: 1617 SISESLSPFLKMSFETASKFIVEAAAHGLTDNLETPSSRICLGLPVKMGTGCFDIMQEL 1675


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  237 bits (605), Expect = 6e-60
 Identities = 153/359 (42%), Positives = 191/359 (53%), Gaps = 21/359 (5%)
 Frame = -2

Query: 1170 KKSKQARDEVEYEDGIENEKFAATAGEHDD-EIRSGFESGVDQIEEDEDYVMGGENPPDS 994
            K+ +QA DE++Y D         + GE D+ E  +G    +D +E DE  +   E    S
Sbjct: 1355 KRKQQASDEMDYGD---------SEGEPDEGEPSAGLTEEIDLVE-DEVEISNNEEVGIS 1404

Query: 993  DTDTEAPETPTKGHSTPMPVDSKKSKFTNKGEESLSKAESTTVSXXXXXXXXXXXXXXXX 814
            D   E  + P+K  S+     +KK+K   K ++     +                     
Sbjct: 1405 DPKDEDSKVPSKSKSSK----NKKAKTEAKRKKRFRAIKKD------------------- 1441

Query: 813  XXXXXXXXXXXXXXXXXXXXKFEGLNFEVQFVFRKEPRILLAEIAQKTSKCVYVKQCKNI 634
                                K +G  FEV F F  EP ILLA+IAQK +  VY++    I
Sbjct: 1442 -------------FDRAILVKAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKI 1488

Query: 633  DKCTVKE-NKNNT-----DPF--------------TLQIAGVDFATLWNLYEHLDVNQIY 514
            D C V + NK+       DP                LQ AGVDF   W + + LDV  +Y
Sbjct: 1489 DLCQVIDCNKDQVIYYGRDPKKRENIPGEEKKKLPALQTAGVDFTAFWKMQDELDVRYVY 1548

Query: 513  TNDVHAMLNTYGVEAARATIIKEVTNVFGLYGINVNIRHLSLIADFMTFHGGYRPMNRLG 334
            +N+VHAMLNT+GVEAARATIIKEV NVF  YG+ VNIRHLSLIADFMT  GGYRPMNR G
Sbjct: 1549 SNNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHG 1608

Query: 333  MAGFNTSPFGRMTFETATKFIVESALHGEVDTLESPSASVCLGQPVKYGTGCFDLMQNL 157
                + SPF +MTFETA+KFIVE+A HG  D LES SA +CLG PVK GTGCFDLMQ +
Sbjct: 1609 GIAESVSPFSKMTFETASKFIVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKI 1667


>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score =  237 bits (605), Expect = 6e-60
 Identities = 153/359 (42%), Positives = 191/359 (53%), Gaps = 21/359 (5%)
 Frame = -2

Query: 1170 KKSKQARDEVEYEDGIENEKFAATAGEHDD-EIRSGFESGVDQIEEDEDYVMGGENPPDS 994
            K+ +QA DE++Y D         + GE D+ E  +G    +D +E DE  +   E    S
Sbjct: 1426 KRKQQASDEMDYGD---------SEGEPDEGEPSAGLTEEIDLVE-DEVEISNNEEVGIS 1475

Query: 993  DTDTEAPETPTKGHSTPMPVDSKKSKFTNKGEESLSKAESTTVSXXXXXXXXXXXXXXXX 814
            D   E  + P+K  S+     +KK+K   K ++     +                     
Sbjct: 1476 DPKDEDSKVPSKSKSSK----NKKAKTEAKRKKRFRAIKKD------------------- 1512

Query: 813  XXXXXXXXXXXXXXXXXXXXKFEGLNFEVQFVFRKEPRILLAEIAQKTSKCVYVKQCKNI 634
                                K +G  FEV F F  EP ILLA+IAQK +  VY++    I
Sbjct: 1513 -------------FDRAILVKAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKI 1559

Query: 633  DKCTVKE-NKNNT-----DPF--------------TLQIAGVDFATLWNLYEHLDVNQIY 514
            D C V + NK+       DP                LQ AGVDF   W + + LDV  +Y
Sbjct: 1560 DLCQVIDCNKDQVIYYGRDPKKRENIPGEEKKKLPALQTAGVDFTAFWKMQDELDVRYVY 1619

Query: 513  TNDVHAMLNTYGVEAARATIIKEVTNVFGLYGINVNIRHLSLIADFMTFHGGYRPMNRLG 334
            +N+VHAMLNT+GVEAARATIIKEV NVF  YG+ VNIRHLSLIADFMT  GGYRPMNR G
Sbjct: 1620 SNNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHG 1679

Query: 333  MAGFNTSPFGRMTFETATKFIVESALHGEVDTLESPSASVCLGQPVKYGTGCFDLMQNL 157
                + SPF +MTFETA+KFIVE+A HG  D LES SA +CLG PVK GTGCFDLMQ +
Sbjct: 1680 GIAESVSPFSKMTFETASKFIVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKI 1738


>ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus
            sinensis]
          Length = 1715

 Score =  237 bits (604), Expect = 8e-60
 Identities = 148/363 (40%), Positives = 186/363 (51%), Gaps = 21/363 (5%)
 Frame = -2

Query: 1182 GTGAKKSKQ-ARDEVEYEDGIENEKFAATAGEHDDEIRSGFESGVDQIEEDEDYVMGGEN 1006
            G  A K KQ A DE +YEDG E E        +D    +GF S +DQ E + D       
Sbjct: 1385 GMDAHKQKQRATDEKDYEDGSEEEM-------NDGVSAAGFGSEIDQAESEIDDDQAETE 1437

Query: 1005 PPDSDTDTEAPETPTKGHSTPMPVDSKKSKFTNKGEESLSKAESTTVSXXXXXXXXXXXX 826
              D     E   +  +      P   K SK  +K +    KA +  V             
Sbjct: 1438 IEDDRATNEIETSQDQASENLKPFTPKSSKKKSKSKSKRKKARAKLVKKDTDRAIYVAA- 1496

Query: 825  XXXXXXXXXXXXXXXXXXXXXXXXKFEGLNFEVQFVFRKEPRILLAEIAQKTSKCVYVKQ 646
                                       G++FE  F F  EP ILLA+IA+  +K VY++ 
Sbjct: 1497 --------------------------RGMHFEAHFKFINEPNILLAQIARHVAKKVYIQS 1530

Query: 645  CKNIDKCTVKENKNNT------DPFT--------------LQIAGVDFATLWNLYEHLDV 526
               ID+C V   K +       DP T              L   GVDF   W L + +DV
Sbjct: 1531 SGKIDQCQVTNCKESQVIYYGKDPKTREDIKPEEKEKVQALHTTGVDFHAFWRLQDFIDV 1590

Query: 525  NQIYTNDVHAMLNTYGVEAARATIIKEVTNVFGLYGINVNIRHLSLIADFMTFHGGYRPM 346
              IY+N++ AML TYGVEAAR TII+E+ +VFG YGI+VN RHLSLIADFMT  GGYRPM
Sbjct: 1591 RYIYSNNIQAMLETYGVEAARETIIREIKHVFGSYGISVNTRHLSLIADFMTHSGGYRPM 1650

Query: 345  NRLGMAGFNTSPFGRMTFETATKFIVESALHGEVDTLESPSASVCLGQPVKYGTGCFDLM 166
            +RLG    + SPF +MTFETA+KFIVE+A +G+VD L++PSA +CLG PVK GTG FDLM
Sbjct: 1651 SRLGGIAESVSPFSKMTFETASKFIVEAASYGQVDKLDTPSARICLGLPVKMGTGSFDLM 1710

Query: 165  QNL 157
            Q L
Sbjct: 1711 QKL 1713


>gb|EEE66009.1| hypothetical protein OsJ_21960 [Oryza sativa Japonica Group]
          Length = 209

 Score =  234 bits (598), Expect = 4e-59
 Identities = 118/201 (58%), Positives = 148/201 (73%)
 Frame = -2

Query: 744 GLNFEVQFVFRKEPRILLAEIAQKTSKCVYVKQCKNIDKCTVKENKNNTDPFTLQIAGVD 565
           GLNFEV +  +++P ILLA+IAQ+T++ V+VK                        +GV+
Sbjct: 29  GLNFEVHYALQEQPHILLAQIAQRTARSVFVKA-----------------------SGVN 65

Query: 564 FATLWNLYEHLDVNQIYTNDVHAMLNTYGVEAARATIIKEVTNVFGLYGINVNIRHLSLI 385
           F     L ++LD+N++ +ND+HAMLNTYGVEAARATII EV  VFG YGI+V++RHL+LI
Sbjct: 66  FEVFHKLVDYLDINEVRSNDIHAMLNTYGVEAARATIIGEVKGVFGAYGIHVDMRHLNLI 125

Query: 384 ADFMTFHGGYRPMNRLGMAGFNTSPFGRMTFETATKFIVESALHGEVDTLESPSASVCLG 205
           ADFMTF GGYRPM+RLGM  F+TSPFG+MTFETATKFIVE+A HGE DTL+ PSASVCLG
Sbjct: 126 ADFMTFDGGYRPMSRLGMGQFSTSPFGKMTFETATKFIVEAASHGESDTLDGPSASVCLG 185

Query: 204 QPVKYGTGCFDLMQNLPM*GP 142
           +PVK GTG F L+QN  +  P
Sbjct: 186 KPVKVGTGSFGLLQNFSLEQP 206


>gb|EMJ04262.1| hypothetical protein PRUPE_ppa000153mg [Prunus persica]
          Length = 1612

 Score =  234 bits (596), Expect = 7e-59
 Identities = 146/359 (40%), Positives = 194/359 (54%), Gaps = 21/359 (5%)
 Frame = -2

Query: 1170 KKSKQARDEVEYEDGIENEKFAATAGEHDDEIRSGFESGVDQIEEDEDYVMGGENPPDSD 991
            K+  QA DE++YEDG ++E   A       ++  G ES +D+ E + +    GE     D
Sbjct: 1281 KRKLQATDEMDYEDGCDDEVREA-------DLSDGDESEIDEEENEVEIGKDGEIGV-ID 1332

Query: 990  TDTEAPETPTKGHSTPMPVDSKKSKFTNKGEESLSKAESTTVSXXXXXXXXXXXXXXXXX 811
             + E P +P +  +  +     K K T  G +   K +                      
Sbjct: 1333 ANDEMPGSPLE-EAGDLAKPKSKEKKTKSGSQIRKKRKVRAEMVKKETDRAIFVSA---- 1387

Query: 810  XXXXXXXXXXXXXXXXXXXKFEGLNFEVQFVFR-KEPRILLAEIAQKTSKCVYVKQCKNI 634
                                 +G +FEV F F   EP ILL++IAQKT++ VY+++   +
Sbjct: 1388 ---------------------KGFHFEVHFRFADNEPHILLSQIAQKTAQKVYIQRSGKV 1426

Query: 633  DKC---TVKENK--------NNTDPFT---------LQIAGVDFATLWNLYEHLDVNQIY 514
              C   T  EN+         N   F+         LQ  G+DF T W L + LDV  IY
Sbjct: 1427 ADCKQITCDENQVLCFGKDPENKQSFSSKEKKEMPALQTTGIDFGTFWQLQDVLDVRYIY 1486

Query: 513  TNDVHAMLNTYGVEAARATIIKEVTNVFGLYGINVNIRHLSLIADFMTFHGGYRPMNRLG 334
            +N++HAMLNTYGVEAAR TII+E+ NVF  YGI+VNIRHL+LIADFMT  GGYRP+NR G
Sbjct: 1487 SNNIHAMLNTYGVEAARETIIREINNVFKSYGISVNIRHLTLIADFMTHAGGYRPLNRFG 1546

Query: 333  MAGFNTSPFGRMTFETATKFIVESALHGEVDTLESPSASVCLGQPVKYGTGCFDLMQNL 157
                + SPF +MTFETA+KFIVE+A HG+VD LE+PSA +CLG PV  GTGCFDLM  +
Sbjct: 1547 GIVESISPFNKMTFETASKFIVEAAYHGQVDRLETPSARICLGLPVNVGTGCFDLMHKM 1605


>ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Populus trichocarpa]
            gi|550335519|gb|ERP58815.1| hypothetical protein
            POPTR_0006s05420g [Populus trichocarpa]
          Length = 1132

 Score =  233 bits (594), Expect = 1e-58
 Identities = 143/358 (39%), Positives = 187/358 (52%), Gaps = 20/358 (5%)
 Frame = -2

Query: 1170 KKSKQARDEVEYEDGIENEKFAATAGEHDDEIRSGFESGVDQIEEDEDYVMGGENPPDSD 991
            K+ +Q  DE++Y+DG E             +  SG ES  +  +++ +      N    D
Sbjct: 789  KRKQQVTDEMDYDDGSEGVLNEDEGDLSGSQAPSGSESDTEPADKESEI----SNTDMVD 844

Query: 990  TDTEAPETPTKGHSTPMPVDSKKSKFTNKGEESLSKAESTTVSXXXXXXXXXXXXXXXXX 811
             D+E  E PT   +   P   KK+  ++   E  SK +ST                    
Sbjct: 845  YDSEYFEKPTHLGNYSKPKSRKKTSESSSQVEMHSKLKSTEKKKQKAKGKKVRSKLVKKD 904

Query: 810  XXXXXXXXXXXXXXXXXXXKFEGLNFEVQFVFRKEPRILLAEIAQKTSKCVYVKQCKNID 631
                                 +GL+FE+   F  EP ILLAEIAQKT+K V ++    + 
Sbjct: 905  FDRSIFVEA------------KGLHFEIHLKFTNEPHILLAEIAQKTAKKVCIQNPGKVQ 952

Query: 630  KCTVKENKNNT------DPF--------------TLQIAGVDFATLWNLYEHLDVNQIYT 511
            +C V + K N       DP                L   GVDF T W + +HLDV  +Y+
Sbjct: 953  RCQVTDCKENQVIYYGKDPKRRIDIEPGEKQKIPALHTIGVDFNTFWKMQDHLDVRYMYS 1012

Query: 510  NDVHAMLNTYGVEAARATIIKEVTNVFGLYGINVNIRHLSLIADFMTFHGGYRPMNRLGM 331
            N +H ML  YGVEAAR TII+E+ +VF  YGI+VN RHLSLIAD+MT  G YRPM+R+G 
Sbjct: 1013 NSIHGMLKAYGVEAARETIIREIKHVFNSYGISVNTRHLSLIADYMTHTGEYRPMSRIGG 1072

Query: 330  AGFNTSPFGRMTFETATKFIVESALHGEVDTLESPSASVCLGQPVKYGTGCFDLMQNL 157
               + SP  +M+FETA+KFIVE+ALHGEVD LE+PSA VCLG PVK GTG FDLMQ L
Sbjct: 1073 ISESISPLSKMSFETASKFIVEAALHGEVDNLEAPSARVCLGLPVKMGTGSFDLMQKL 1130


>ref|XP_002308050.1| predicted protein [Populus trichocarpa]
          Length = 464

 Score =  233 bits (594), Expect = 1e-58
 Identities = 143/358 (39%), Positives = 187/358 (52%), Gaps = 20/358 (5%)
 Frame = -2

Query: 1170 KKSKQARDEVEYEDGIENEKFAATAGEHDDEIRSGFESGVDQIEEDEDYVMGGENPPDSD 991
            K+ +Q  DE++Y+DG E             +  SG ES  +  +++ +      N    D
Sbjct: 121  KRKQQVTDEMDYDDGSEGVLNEDEGDLSGSQAPSGSESDTEPADKESEI----SNTDMVD 176

Query: 990  TDTEAPETPTKGHSTPMPVDSKKSKFTNKGEESLSKAESTTVSXXXXXXXXXXXXXXXXX 811
             D+E  E PT   +   P   KK+  ++   E  SK +ST                    
Sbjct: 177  YDSEYFEKPTHLGNYSKPKSRKKTSESSSQVEMHSKLKSTEKKKQKAKGKKVRSKLVKKD 236

Query: 810  XXXXXXXXXXXXXXXXXXXKFEGLNFEVQFVFRKEPRILLAEIAQKTSKCVYVKQCKNID 631
                                 +GL+FE+   F  EP ILLAEIAQKT+K V ++    + 
Sbjct: 237  FDRSIFVEA------------KGLHFEIHLKFTNEPHILLAEIAQKTAKKVCIQNPGKVQ 284

Query: 630  KCTVKENKNNT------DPF--------------TLQIAGVDFATLWNLYEHLDVNQIYT 511
            +C V + K N       DP                L   GVDF T W + +HLDV  +Y+
Sbjct: 285  RCQVTDCKENQVIYYGKDPKRRIDIEPGEKQKIPALHTIGVDFNTFWKMQDHLDVRYMYS 344

Query: 510  NDVHAMLNTYGVEAARATIIKEVTNVFGLYGINVNIRHLSLIADFMTFHGGYRPMNRLGM 331
            N +H ML  YGVEAAR TII+E+ +VF  YGI+VN RHLSLIAD+MT  G YRPM+R+G 
Sbjct: 345  NSIHGMLKAYGVEAARETIIREIKHVFNSYGISVNTRHLSLIADYMTHTGEYRPMSRIGG 404

Query: 330  AGFNTSPFGRMTFETATKFIVESALHGEVDTLESPSASVCLGQPVKYGTGCFDLMQNL 157
               + SP  +M+FETA+KFIVE+ALHGEVD LE+PSA VCLG PVK GTG FDLMQ L
Sbjct: 405  ISESISPLSKMSFETASKFIVEAALHGEVDNLEAPSARVCLGLPVKMGTGSFDLMQKL 462


>ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citrus clementina]
            gi|557523327|gb|ESR34694.1| hypothetical protein
            CICLE_v10004132mg [Citrus clementina]
          Length = 1715

 Score =  233 bits (593), Expect = 2e-58
 Identities = 146/363 (40%), Positives = 184/363 (50%), Gaps = 21/363 (5%)
 Frame = -2

Query: 1182 GTGAKKSKQ-ARDEVEYEDGIENEKFAATAGEHDDEIRSGFESGVDQIEEDEDYVMGGEN 1006
            G  A K KQ A DE +YEDG E E        +D    +GF S +DQ E + D       
Sbjct: 1385 GMDAHKQKQRATDEKDYEDGSEGEM-------NDGVSAAGFGSEIDQAESEIDDDQAETE 1437

Query: 1005 PPDSDTDTEAPETPTKGHSTPMPVDSKKSKFTNKGEESLSKAESTTVSXXXXXXXXXXXX 826
              D     E   +  +      P   K SK  +K +    KA +  V             
Sbjct: 1438 IEDDRATNEIENSQDQASENLKPFTPKSSKKKSKSKTKRKKARAKLVKKDTDRAIYVAA- 1496

Query: 825  XXXXXXXXXXXXXXXXXXXXXXXXKFEGLNFEVQFVFRKEPRILLAEIAQKTSKCVYVKQ 646
                                       G++FE  F F  EP ILLA+IA+  +K VY++ 
Sbjct: 1497 --------------------------RGMHFEAHFKFINEPNILLAQIARHVAKKVYIQS 1530

Query: 645  CKNIDKCTVKENKNNT------DPF--------------TLQIAGVDFATLWNLYEHLDV 526
               ID+C V   K +       DP                L   GVDF   W L + +DV
Sbjct: 1531 SGKIDQCQVTNCKESQVIYYGKDPKKREDIKPEEKEKVQALHTTGVDFHAFWQLQDFIDV 1590

Query: 525  NQIYTNDVHAMLNTYGVEAARATIIKEVTNVFGLYGINVNIRHLSLIADFMTFHGGYRPM 346
              IY+N++ AML TYGVEAAR TII+E+ +VFG YGI+VN RHLSLIADFMT  GGYRPM
Sbjct: 1591 RYIYSNNIQAMLETYGVEAARETIIREIKHVFGSYGISVNTRHLSLIADFMTHSGGYRPM 1650

Query: 345  NRLGMAGFNTSPFGRMTFETATKFIVESALHGEVDTLESPSASVCLGQPVKYGTGCFDLM 166
            +RLG    + SPF +MTFE A+KFIVE+A +G+VD L++PSA +CLG PVK GTG FDLM
Sbjct: 1651 SRLGGIAESVSPFSKMTFEIASKFIVEAASYGQVDKLDTPSARICLGLPVKMGTGSFDLM 1710

Query: 165  QNL 157
            Q L
Sbjct: 1711 QKL 1713


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
            sativus]
          Length = 1650

 Score =  230 bits (587), Expect = 8e-58
 Identities = 150/363 (41%), Positives = 193/363 (53%), Gaps = 21/363 (5%)
 Frame = -2

Query: 1182 GTGAKKSK-QARDEVEYEDGIENEKFAATAGEHDDEIRSGFESGVDQIEEDEDYVMGGEN 1006
            G+  KK K QA DE++YED  E++  A        E  +GFES VDQ +E E        
Sbjct: 1327 GSDMKKQKLQANDEMDYEDDSEDDLNAK-------ESSTGFESEVDQGDEAEI------- 1372

Query: 1005 PPDSDTDTEAPETPTKGHSTPMPVDSKKSKFTNKGEESLSKAESTTVSXXXXXXXXXXXX 826
               ++ D       +   + P  VD  KS    K  E+ SK +    S            
Sbjct: 1373 ---TNNDMIEIVKDSASENQPEIVDVSKSMSKEKTTET-SKEKKKVKSELVRKETDRSIF 1428

Query: 825  XXXXXXXXXXXXXXXXXXXXXXXXKFEGLNFEVQFVFRKEPRILLAEIAQKTSKCVYVKQ 646
                                         +FEV F F  EP  LL++I Q+ ++ V +++
Sbjct: 1429 VEAKEN-----------------------HFEVHFKFTNEPHTLLSQIVQRAAQKVSIQR 1465

Query: 645  CKNIDKC---------------TVKENKNNTDPF-----TLQIAGVDFATLWNLYEHLDV 526
               I +C                +KE KN           LQ +GVDF TLW + + LDV
Sbjct: 1466 SGKIIQCQQITCKEGQVIYHGNNLKERKNLKPEEKEKIPALQTSGVDFKTLWEMQDELDV 1525

Query: 525  NQIYTNDVHAMLNTYGVEAARATIIKEVTNVFGLYGINVNIRHLSLIADFMTFHGGYRPM 346
              IY+ND+HAML TYGVEAARATII+E+ N+F  YGI+VNIRHLSL+AD+MT  GGYRPM
Sbjct: 1526 RYIYSNDIHAMLQTYGVEAARATIIREIQNIFTSYGISVNIRHLSLVADYMTHSGGYRPM 1585

Query: 345  NRLGMAGFNTSPFGRMTFETATKFIVESALHGEVDTLESPSASVCLGQPVKYGTGCFDLM 166
            +RLG    + SPF RMTFETA KFIV++ALHGEVD LE+PS+ +CLG PVK GTG FDLM
Sbjct: 1586 SRLGGISDSISPFSRMTFETAGKFIVQAALHGEVDNLETPSSRICLGLPVKMGTGSFDLM 1645

Query: 165  QNL 157
            Q +
Sbjct: 1646 QKI 1648


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            RPA1-like [Cucumis sativus]
          Length = 1652

 Score =  229 bits (583), Expect = 2e-57
 Identities = 147/358 (41%), Positives = 190/358 (53%), Gaps = 20/358 (5%)
 Frame = -2

Query: 1170 KKSKQARDEVEYEDGIENEKFAATAGEHDDEIRSGFESGVDQIEEDEDYVMGGENPPDSD 991
            K+  QA DE++YED  E++  A        E  +GFES VDQ +E E           ++
Sbjct: 1334 KQKLQANDEMDYEDDSEDDLNAK-------ESSTGFESEVDQGDEAEI----------TN 1376

Query: 990  TDTEAPETPTKGHSTPMPVDSKKSKFTNKGEESLSKAESTTVSXXXXXXXXXXXXXXXXX 811
             D       +   + P  VD  KS    K  E+ SK +    S                 
Sbjct: 1377 NDMIEIVKDSASENQPEIVDVSKSMSKEKTTET-SKEKKKVKSELVRKETDRSIFVEAKE 1435

Query: 810  XXXXXXXXXXXXXXXXXXXKFEGLNFEVQFVFRKEPRILLAEIAQKTSKCVYVKQCKNID 631
                                    +FEV F F  EP  LL++I Q+ ++ V +++   I 
Sbjct: 1436 N-----------------------HFEVHFKFTNEPHTLLSQIVQRAAQKVSIQRSGKII 1472

Query: 630  KC---------------TVKENKNNTDPF-----TLQIAGVDFATLWNLYEHLDVNQIYT 511
            +C                +KE KN           LQ +GVDF TLW + + LDV  IY+
Sbjct: 1473 QCQQITCKEGQVIYHGNNLKERKNLKPEEKEKIPALQTSGVDFKTLWEMQDELDVRYIYS 1532

Query: 510  NDVHAMLNTYGVEAARATIIKEVTNVFGLYGINVNIRHLSLIADFMTFHGGYRPMNRLGM 331
            ND+HAML TYGVEAARATII+E+ N+F  YGI+VNIRHLSL+AD+MT  GGYRPM+RLG 
Sbjct: 1533 NDIHAMLQTYGVEAARATIIREIQNIFTSYGISVNIRHLSLVADYMTHSGGYRPMSRLGG 1592

Query: 330  AGFNTSPFGRMTFETATKFIVESALHGEVDTLESPSASVCLGQPVKYGTGCFDLMQNL 157
               + SPF RMTFETA KFIV++ALHGEVD LE+PS+ +CLG PVK GTG FDLMQ +
Sbjct: 1593 ISDSISPFSRMTFETAGKFIVQAALHGEVDNLETPSSRICLGLPVKMGTGSFDLMQKI 1650