BLASTX nr result
ID: Zingiber23_contig00001935
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00001935
(783 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ01524.1| hypothetical protein PRUPE_ppa000536mg [Prunus pe... 116 1e-23
gb|EOX98308.1| RING/U-box superfamily protein isoform 4 [Theobro... 110 4e-22
gb|EOX98306.1| RING/U-box domain-containing protein isoform 1 [T... 110 4e-22
ref|XP_002282447.2| PREDICTED: E3 ubiquitin-protein ligase MARCH... 108 2e-21
emb|CBI32382.3| unnamed protein product [Vitis vinifera] 108 2e-21
emb|CAN65907.1| hypothetical protein VITISV_004874 [Vitis vinifera] 108 2e-21
ref|XP_006487037.1| PREDICTED: probable E3 ubiquitin ligase SUD1... 107 5e-21
ref|XP_006487036.1| PREDICTED: probable E3 ubiquitin ligase SUD1... 107 5e-21
ref|XP_006422977.1| hypothetical protein CICLE_v10027715mg [Citr... 106 8e-21
ref|XP_006422976.1| hypothetical protein CICLE_v10027715mg [Citr... 106 8e-21
ref|XP_004290591.1| PREDICTED: E3 ubiquitin-protein ligase MARCH... 106 1e-20
ref|XP_002518730.1| ssm4 protein, putative [Ricinus communis] gi... 105 1e-20
ref|XP_004505248.1| PREDICTED: E3 ubiquitin-protein ligase MARCH... 103 5e-20
ref|XP_004505246.1| PREDICTED: E3 ubiquitin-protein ligase MARCH... 103 5e-20
ref|XP_002298731.2| zinc finger family protein [Populus trichoca... 103 9e-20
gb|ESW25576.1| hypothetical protein PHAVU_003G047600g [Phaseolus... 102 1e-19
gb|ESW25575.1| hypothetical protein PHAVU_003G047600g [Phaseolus... 102 1e-19
ref|XP_006574896.1| PREDICTED: probable E3 ubiquitin ligase SUD1... 102 2e-19
ref|XP_003518705.1| PREDICTED: probable E3 ubiquitin ligase SUD1... 102 2e-19
ref|XP_002438724.1| hypothetical protein SORBIDRAFT_10g025050 [S... 102 2e-19
>gb|EMJ01524.1| hypothetical protein PRUPE_ppa000536mg [Prunus persica]
Length = 1109
Score = 116 bits (290), Expect = 1e-23
Identities = 57/92 (61%), Positives = 64/92 (69%), Gaps = 3/92 (3%)
Frame = +1
Query: 1 VYRFAWLGXXXXXXXXXXAKRFHIWFTNLHNSIRDDRYLIGRRLHNFGEAITGDQESRPN 180
VYRFAWLG AKRFH+WFTNLHNSIRDDRYLIGRRLHNFGEAI Q
Sbjct: 1015 VYRFAWLGCLCFSLLCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEAIVEKQNESGT 1074
Query: 181 GQETNSTN---AGLILHEQEVDMGLRLRRANQ 267
E +N +GLI H++E D+GLRLRRAN+
Sbjct: 1075 SSEMQDSNFEASGLIRHDREADVGLRLRRANR 1106
>gb|EOX98308.1| RING/U-box superfamily protein isoform 4 [Theobroma cacao]
Length = 831
Score = 110 bits (276), Expect = 4e-22
Identities = 55/91 (60%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Frame = +1
Query: 1 VYRFAWLGXXXXXXXXXXAKRFHIWFTNLHNSIRDDRYLIGRRLHNFGEAITGDQESRPN 180
VYRFAWLG AKRFH+WFTNLHNSIRDDRYLIGRRLHN+GE Q
Sbjct: 741 VYRFAWLGCLGFSFLCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNYGEDSEEKQSEAGT 800
Query: 181 GQETNSTN---AGLILHEQEVDMGLRLRRAN 264
ET +N GLI H++E D+GLRLRRAN
Sbjct: 801 SSETQISNLMGTGLIRHDREADVGLRLRRAN 831
>gb|EOX98306.1| RING/U-box domain-containing protein isoform 1 [Theobroma cacao]
Length = 1121
Score = 110 bits (276), Expect = 4e-22
Identities = 55/91 (60%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Frame = +1
Query: 1 VYRFAWLGXXXXXXXXXXAKRFHIWFTNLHNSIRDDRYLIGRRLHNFGEAITGDQESRPN 180
VYRFAWLG AKRFH+WFTNLHNSIRDDRYLIGRRLHN+GE Q
Sbjct: 1031 VYRFAWLGCLGFSFLCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNYGEDSEEKQSEAGT 1090
Query: 181 GQETNSTN---AGLILHEQEVDMGLRLRRAN 264
ET +N GLI H++E D+GLRLRRAN
Sbjct: 1091 SSETQISNLMGTGLIRHDREADVGLRLRRAN 1121
>ref|XP_002282447.2| PREDICTED: E3 ubiquitin-protein ligase MARCH6 [Vitis vinifera]
Length = 1195
Score = 108 bits (271), Expect = 2e-21
Identities = 56/93 (60%), Positives = 63/93 (67%), Gaps = 4/93 (4%)
Frame = +1
Query: 1 VYRFAWLGXXXXXXXXXXAKRFHIWFTNLHNSIRDDRYLIGRRLHNFGEAITGDQ-ESRP 177
VYRFAWLG AKRFH+WFTNLHNSIRDDRYLIGRRLHN+GE G Q E
Sbjct: 1100 VYRFAWLGCLCFSLLCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNYGEDTEGKQNEVED 1159
Query: 178 NGQETNSTN---AGLILHEQEVDMGLRLRRANQ 267
ET S N LI H++E D+G+RLRRAN+
Sbjct: 1160 IPSETQSANLHGTALIRHDREADIGMRLRRANR 1192
>emb|CBI32382.3| unnamed protein product [Vitis vinifera]
Length = 1110
Score = 108 bits (271), Expect = 2e-21
Identities = 56/93 (60%), Positives = 63/93 (67%), Gaps = 4/93 (4%)
Frame = +1
Query: 1 VYRFAWLGXXXXXXXXXXAKRFHIWFTNLHNSIRDDRYLIGRRLHNFGEAITGDQ-ESRP 177
VYRFAWLG AKRFH+WFTNLHNSIRDDRYLIGRRLHN+GE G Q E
Sbjct: 1015 VYRFAWLGCLCFSLLCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNYGEDTEGKQNEVED 1074
Query: 178 NGQETNSTN---AGLILHEQEVDMGLRLRRANQ 267
ET S N LI H++E D+G+RLRRAN+
Sbjct: 1075 IPSETQSANLHGTALIRHDREADIGMRLRRANR 1107
>emb|CAN65907.1| hypothetical protein VITISV_004874 [Vitis vinifera]
Length = 1177
Score = 108 bits (271), Expect = 2e-21
Identities = 56/93 (60%), Positives = 63/93 (67%), Gaps = 4/93 (4%)
Frame = +1
Query: 1 VYRFAWLGXXXXXXXXXXAKRFHIWFTNLHNSIRDDRYLIGRRLHNFGEAITGDQ-ESRP 177
VYRFAWLG AKRFH+WFTNLHNSIRDDRYLIGRRLHN+GE G Q E
Sbjct: 1082 VYRFAWLGCLCFSLLCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNYGEDTEGKQNEVED 1141
Query: 178 NGQETNSTN---AGLILHEQEVDMGLRLRRANQ 267
ET S N LI H++E D+G+RLRRAN+
Sbjct: 1142 IPSETQSANLHGTALIRHDREADIGMRLRRANR 1174
>ref|XP_006487037.1| PREDICTED: probable E3 ubiquitin ligase SUD1-like isoform X2 [Citrus
sinensis]
Length = 1122
Score = 107 bits (267), Expect = 5e-21
Identities = 54/91 (59%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Frame = +1
Query: 1 VYRFAWLGXXXXXXXXXXAKRFHIWFTNLHNSIRDDRYLIGRRLHNFGEAI---TGDQES 171
VYRFAWLG AKRFH+WFTNLHNSIRDDRYLIGRRLHNFGE I D+ +
Sbjct: 1032 VYRFAWLGCLCFSVLWFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEDILEKQNDEGT 1091
Query: 172 RPNGQETNSTNAGLILHEQEVDMGLRLRRAN 264
Q + S GLI ++E D+GLRLRRA+
Sbjct: 1092 SSEMQNSGSHGTGLIQSDREADVGLRLRRAH 1122
>ref|XP_006487036.1| PREDICTED: probable E3 ubiquitin ligase SUD1-like isoform X1 [Citrus
sinensis]
Length = 1123
Score = 107 bits (267), Expect = 5e-21
Identities = 54/91 (59%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Frame = +1
Query: 1 VYRFAWLGXXXXXXXXXXAKRFHIWFTNLHNSIRDDRYLIGRRLHNFGEAI---TGDQES 171
VYRFAWLG AKRFH+WFTNLHNSIRDDRYLIGRRLHNFGE I D+ +
Sbjct: 1033 VYRFAWLGCLCFSVLWFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEDILEKQNDEGT 1092
Query: 172 RPNGQETNSTNAGLILHEQEVDMGLRLRRAN 264
Q + S GLI ++E D+GLRLRRA+
Sbjct: 1093 SSEMQNSGSHGTGLIQSDREADVGLRLRRAH 1123
>ref|XP_006422977.1| hypothetical protein CICLE_v10027715mg [Citrus clementina]
gi|557524911|gb|ESR36217.1| hypothetical protein
CICLE_v10027715mg [Citrus clementina]
Length = 1043
Score = 106 bits (265), Expect = 8e-21
Identities = 53/91 (58%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Frame = +1
Query: 1 VYRFAWLGXXXXXXXXXXAKRFHIWFTNLHNSIRDDRYLIGRRLHNFGEAI---TGDQES 171
VYRFAWLG AKRFH+WFTNLHNSIRDDRYLIGRRLHNFGE + D+ +
Sbjct: 953 VYRFAWLGCLCFSVLWFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEDLLEKQNDEGT 1012
Query: 172 RPNGQETNSTNAGLILHEQEVDMGLRLRRAN 264
Q + S GLI ++E D+GLRLRRA+
Sbjct: 1013 SSEMQNSGSHGTGLIQSDREADVGLRLRRAH 1043
>ref|XP_006422976.1| hypothetical protein CICLE_v10027715mg [Citrus clementina]
gi|557524910|gb|ESR36216.1| hypothetical protein
CICLE_v10027715mg [Citrus clementina]
Length = 1112
Score = 106 bits (265), Expect = 8e-21
Identities = 53/91 (58%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Frame = +1
Query: 1 VYRFAWLGXXXXXXXXXXAKRFHIWFTNLHNSIRDDRYLIGRRLHNFGEAI---TGDQES 171
VYRFAWLG AKRFH+WFTNLHNSIRDDRYLIGRRLHNFGE + D+ +
Sbjct: 1022 VYRFAWLGCLCFSVLWFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEDLLEKQNDEGT 1081
Query: 172 RPNGQETNSTNAGLILHEQEVDMGLRLRRAN 264
Q + S GLI ++E D+GLRLRRA+
Sbjct: 1082 SSEMQNSGSHGTGLIQSDREADVGLRLRRAH 1112
>ref|XP_004290591.1| PREDICTED: E3 ubiquitin-protein ligase MARCH6-like [Fragaria vesca
subsp. vesca]
Length = 1106
Score = 106 bits (264), Expect = 1e-20
Identities = 53/92 (57%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
Frame = +1
Query: 1 VYRFAWLGXXXXXXXXXXAKRFHIWFTNLHNSIRDDRYLIGRRLHNFGEAITGDQESRPN 180
VYRFAW+G AKRFH+WFTNLHNSIRDDRYLIGRRLHNFGE + Q
Sbjct: 1012 VYRFAWIGCLCFSLLCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEDVEEKQNEAGT 1071
Query: 181 GQETNSTN---AGLILHEQEVDMGLRLRRANQ 267
E ++ +GLI H++E D GLRLRRA Q
Sbjct: 1072 SLELQDSSFEVSGLIPHDREADHGLRLRRAIQ 1103
>ref|XP_002518730.1| ssm4 protein, putative [Ricinus communis]
gi|223542111|gb|EEF43655.1| ssm4 protein, putative
[Ricinus communis]
Length = 214
Score = 105 bits (263), Expect = 1e-20
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 7/98 (7%)
Frame = +1
Query: 1 VYRFAWLGXXXXXXXXXXAKRFHIWFTNLHNSIRDDRYLIGRRLHNFGEAITGDQESRPN 180
VYRFAWLG AKRFH+WFTNLHNSIRDDRYLIGRRLHNFGE D+E R N
Sbjct: 119 VYRFAWLGCLCFSVLCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGE----DKEEREN 174
Query: 181 G-------QETNSTNAGLILHEQEVDMGLRLRRANQRQ 273
Q +N A LI ++ EV++GLRLRR Q++
Sbjct: 175 EAGTSSEVQNSNLQGADLIRNDGEVEVGLRLRRVYQQE 212
>ref|XP_004505248.1| PREDICTED: E3 ubiquitin-protein ligase MARCH6-like isoform X3 [Cicer
arietinum]
Length = 1103
Score = 103 bits (258), Expect = 5e-20
Identities = 51/92 (55%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
Frame = +1
Query: 1 VYRFAWLGXXXXXXXXXXAKRFHIWFTNLHNSIRDDRYLIGRRLHNFGEAI--TGDQESR 174
VYRFAWLG AKRFH+WFTNLHNSIRDDRYLIGRRLHNFGE + + E+
Sbjct: 1010 VYRFAWLGCLSFSFLCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEHVVKANEAETS 1069
Query: 175 PNGQETNSTNAGLILHEQEVDMGLRLRRANQR 270
Q+T L +++ D+GLRLRR NQ+
Sbjct: 1070 TGVQDTILVGTNLNQQDRDADVGLRLRRINQQ 1101
>ref|XP_004505246.1| PREDICTED: E3 ubiquitin-protein ligase MARCH6-like isoform X1 [Cicer
arietinum] gi|502143178|ref|XP_004505247.1| PREDICTED: E3
ubiquitin-protein ligase MARCH6-like isoform X2 [Cicer
arietinum]
Length = 1104
Score = 103 bits (258), Expect = 5e-20
Identities = 51/92 (55%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
Frame = +1
Query: 1 VYRFAWLGXXXXXXXXXXAKRFHIWFTNLHNSIRDDRYLIGRRLHNFGEAI--TGDQESR 174
VYRFAWLG AKRFH+WFTNLHNSIRDDRYLIGRRLHNFGE + + E+
Sbjct: 1011 VYRFAWLGCLSFSFLCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEHVVKANEAETS 1070
Query: 175 PNGQETNSTNAGLILHEQEVDMGLRLRRANQR 270
Q+T L +++ D+GLRLRR NQ+
Sbjct: 1071 TGVQDTILVGTNLNQQDRDADVGLRLRRINQQ 1102
>ref|XP_002298731.2| zinc finger family protein [Populus trichocarpa]
gi|550348609|gb|EEE83536.2| zinc finger family protein
[Populus trichocarpa]
Length = 1088
Score = 103 bits (256), Expect = 9e-20
Identities = 51/94 (54%), Positives = 65/94 (69%), Gaps = 3/94 (3%)
Frame = +1
Query: 1 VYRFAWLGXXXXXXXXXXAKRFHIWFTNLHNSIRDDRYLIGRRLHNFGEAITGDQE---S 171
VYRFAWLG AKRFH+WFTNLHNSIRDDRYLIGR+LHN+GE + +Q +
Sbjct: 997 VYRFAWLGCLCFSLLCFCAKRFHVWFTNLHNSIRDDRYLIGRKLHNYGEDLGEEQNEAGT 1056
Query: 172 RPNGQETNSTNAGLILHEQEVDMGLRLRRANQRQ 273
Q +NS + GLI +E D+G+R RRAN+++
Sbjct: 1057 SSEAQNSNSQDTGLI---READVGIRQRRANRQE 1087
>gb|ESW25576.1| hypothetical protein PHAVU_003G047600g [Phaseolus vulgaris]
Length = 1124
Score = 102 bits (255), Expect = 1e-19
Identities = 51/93 (54%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Frame = +1
Query: 1 VYRFAWLGXXXXXXXXXXAKRFHIWFTNLHNSIRDDRYLIGRRLHNFGEAITGDQESRPN 180
VYRFAWLG AKRFH+WFTNLHNSIRDDRYLIGRRLHN+GE + E+ +
Sbjct: 1030 VYRFAWLGCLCFSFLCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNYGEHVEKANEAGTS 1089
Query: 181 G--QETNSTNAGLILHEQEVDMGLRLRRANQRQ 273
Q+T GL + + D+GLRLRR N +Q
Sbjct: 1090 TELQDTILLGTGLNQQDHDADVGLRLRRVNHQQ 1122
>gb|ESW25575.1| hypothetical protein PHAVU_003G047600g [Phaseolus vulgaris]
Length = 1123
Score = 102 bits (255), Expect = 1e-19
Identities = 51/93 (54%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Frame = +1
Query: 1 VYRFAWLGXXXXXXXXXXAKRFHIWFTNLHNSIRDDRYLIGRRLHNFGEAITGDQESRPN 180
VYRFAWLG AKRFH+WFTNLHNSIRDDRYLIGRRLHN+GE + E+ +
Sbjct: 1029 VYRFAWLGCLCFSFLCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNYGEHVEKANEAGTS 1088
Query: 181 G--QETNSTNAGLILHEQEVDMGLRLRRANQRQ 273
Q+T GL + + D+GLRLRR N +Q
Sbjct: 1089 TELQDTILLGTGLNQQDHDADVGLRLRRVNHQQ 1121
>ref|XP_006574896.1| PREDICTED: probable E3 ubiquitin ligase SUD1-like isoform X2 [Glycine
max]
Length = 1124
Score = 102 bits (253), Expect = 2e-19
Identities = 54/97 (55%), Positives = 60/97 (61%), Gaps = 7/97 (7%)
Frame = +1
Query: 1 VYRFAWLGXXXXXXXXXXAKRFHIWFTNLHNSIRDDRYLIGRRLHNFGEAITGDQESRPN 180
VYRFAWLG AKRFH+WFTNLHNSIRDDRYLIGRRLHNFGE + N
Sbjct: 1031 VYRFAWLGCLSFSFVCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGE-----HAEKAN 1085
Query: 181 GQETNS-------TNAGLILHEQEVDMGLRLRRANQR 270
ETNS GL ++E D+GLRLR NQ+
Sbjct: 1086 VAETNSGEKDTILLGTGLNQQDREADVGLRLRHVNQQ 1122
>ref|XP_003518705.1| PREDICTED: probable E3 ubiquitin ligase SUD1-like isoform X1 [Glycine
max]
Length = 1123
Score = 102 bits (253), Expect = 2e-19
Identities = 54/97 (55%), Positives = 60/97 (61%), Gaps = 7/97 (7%)
Frame = +1
Query: 1 VYRFAWLGXXXXXXXXXXAKRFHIWFTNLHNSIRDDRYLIGRRLHNFGEAITGDQESRPN 180
VYRFAWLG AKRFH+WFTNLHNSIRDDRYLIGRRLHNFGE + N
Sbjct: 1030 VYRFAWLGCLSFSFVCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGE-----HAEKAN 1084
Query: 181 GQETNS-------TNAGLILHEQEVDMGLRLRRANQR 270
ETNS GL ++E D+GLRLR NQ+
Sbjct: 1085 VAETNSGEKDTILLGTGLNQQDREADVGLRLRHVNQQ 1121
>ref|XP_002438724.1| hypothetical protein SORBIDRAFT_10g025050 [Sorghum bicolor]
gi|241916947|gb|EER90091.1| hypothetical protein
SORBIDRAFT_10g025050 [Sorghum bicolor]
Length = 743
Score = 102 bits (253), Expect = 2e-19
Identities = 50/91 (54%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Frame = +1
Query: 1 VYRFAWLGXXXXXXXXXXAKRFHIWFTNLHNSIRDDRYLIGRRLHNFGEAITGDQESRPN 180
VYRFAWLG KRFH+WFTNLHNSIRDDRYLIGRRLHNFGE + S
Sbjct: 644 VYRFAWLGCLIFSALFFCGKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEDSHSPEPSESG 703
Query: 181 GQ-ETNSTNAGLILHEQEVDMGLRLRRANQR 270
++ + L+L +QE D+GLR+RR N R
Sbjct: 704 ATIGSDDQDRALVLRDQEEDVGLRMRRNNMR 734