BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00001845
         (1629 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   799   0.0  
ref|XP_006841548.1| hypothetical protein AMTR_s00003p00168720 [A...   796   0.0  
ref|XP_002330044.1| predicted protein [Populus trichocarpa] gi|5...   776   0.0  
ref|XP_006480317.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   773   0.0  
ref|XP_002512602.1| dead box ATP-dependent RNA helicase, putativ...   772   0.0  
ref|XP_006480315.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   771   0.0  
ref|XP_006423936.1| hypothetical protein CICLE_v10027858mg [Citr...   771   0.0  
ref|XP_006480316.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   770   0.0  
ref|XP_006423935.1| hypothetical protein CICLE_v10027858mg [Citr...   770   0.0  
gb|ABF99668.1| DEAD/DEAH box helicase family protein, expressed ...   769   0.0  
gb|EEC76452.1| hypothetical protein OsI_14162 [Oryza sativa Indi...   768   0.0  
ref|NP_001051773.1| Os03g0827700 [Oryza sativa Japonica Group] g...   768   0.0  
gb|ABF99667.1| DEAD/DEAH box helicase family protein, expressed ...   768   0.0  
sp|Q0DM51.2|RH3_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA h...   768   0.0  
ref|XP_006650834.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   766   0.0  
gb|EXB57576.1| DEAD-box ATP-dependent RNA helicase 3 [Morus nota...   765   0.0  
ref|XP_006382233.1| hypothetical protein POPTR_0005s00200g [Popu...   765   0.0  
gb|ACG27839.1| nucleolar RNA helicase 2 [Zea mays]                    763   0.0  
ref|XP_004981197.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   762   0.0  
ref|XP_006355275.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   762   0.0  

>ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
            [Vitis vinifera] gi|296089875|emb|CBI39694.3| unnamed
            protein product [Vitis vinifera]
          Length = 764

 Score =  799 bits (2063), Expect = 0.0
 Identities = 412/542 (76%), Positives = 458/542 (84%), Gaps = 1/542 (0%)
 Frame = +1

Query: 1    AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 180
            +Y  Q+N+LSRGVDVVVGTPGRIIDLI  +SL+LGEVQ LVLDEADQMLAVGFEEDVEVI
Sbjct: 231  SYITQQNALSRGVDVVVGTPGRIIDLIKGNSLKLGEVQNLVLDEADQMLAVGFEEDVEVI 290

Query: 181  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 360
            L+KLP +RQ+MLFSATMP WVKKL+R+YL+NPLTIDLVGD DEKLAEGIKLYAI TTATS
Sbjct: 291  LEKLPSERQSMLFSATMPAWVKKLARKYLDNPLTIDLVGDHDEKLAEGIKLYAIPTTATS 350

Query: 361  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 540
            KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMAL+NSIASEALHGDISQHQRERTL GF
Sbjct: 351  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHQRERTLNGF 410

Query: 541  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 720
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEG AILMFTS
Sbjct: 411  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTS 470

Query: 721  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 900
            SQRRTVKSLERDVGC+FEF+SPP+++EVLESSAEQVVATL GVH +S+++F PTAQ+L +
Sbjct: 471  SQRRTVKSLERDVGCKFEFISPPAIEEVLESSAEQVVATLNGVHPESVEFFTPTAQKLIE 530

Query: 901  EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1080
            E+GT          SGFSQPPS RSLISHEQGWVTLQLTR+ GYSRG+ SARSVTGFLSD
Sbjct: 531  EKGTGALAAALAHLSGFSQPPSFRSLISHEQGWVTLQLTRDSGYSRGFLSARSVTGFLSD 590

Query: 1081 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 1260
            VYP AADE+GKI ++ADE+VQGAVFDLPEEIAKELL KQ+PPGN++ KITKLP LQDDGP
Sbjct: 591  VYPTAADELGKIYLVADERVQGAVFDLPEEIAKELLNKQMPPGNTISKITKLPALQDDGP 650

Query: 1261 ATDFYGRFXXXXXXXXXXXXXXXXXXXXXXWGGRNYDSDDSYGRGGRISDDSYGWGGRAS 1440
            A D+YGRF                        G ++ SDD  G      DD    GGR+ 
Sbjct: 651  AGDYYGRFSNRDRSSRGGSRERRGSRISRG-RGSSWGSDDDGG------DDLNRRGGRSF 703

Query: 1441 RTDSSWSRNTKPRRDSEDDWLIGGRRSSR-TPSFGNRERGFAGACFNCGRSGHRASECPN 1617
            R++++WSRN    R SEDDWLIGGRRS+R + SFG+RER F G+CF CGRSGHRASECPN
Sbjct: 704  RSNNNWSRNL---RTSEDDWLIGGRRSNRSSSSFGSRERSFGGSCFTCGRSGHRASECPN 760

Query: 1618 NK 1623
             +
Sbjct: 761  KR 762


>ref|XP_006841548.1| hypothetical protein AMTR_s00003p00168720 [Amborella trichopoda]
            gi|548843569|gb|ERN03223.1| hypothetical protein
            AMTR_s00003p00168720 [Amborella trichopoda]
          Length = 768

 Score =  796 bits (2056), Expect = 0.0
 Identities = 401/541 (74%), Positives = 456/541 (84%)
 Frame = +1

Query: 1    AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 180
            +YNIQ+N+L+RGVDVVVGTPGRIIDL+N +SL+LGEVQYLVLDEADQMLAVGFEEDVEVI
Sbjct: 238  SYNIQQNALTRGVDVVVGTPGRIIDLVNGNSLQLGEVQYLVLDEADQMLAVGFEEDVEVI 297

Query: 181  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 360
            L+KLP  RQ+MLFSATMPGWVKKL+R+YL+NP+TIDLVGDQ+EKLAEGIKLYAI TTAT+
Sbjct: 298  LEKLPTGRQSMLFSATMPGWVKKLARKYLDNPMTIDLVGDQEEKLAEGIKLYAIPTTATT 357

Query: 361  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 540
            KRTIL DLITVYAKGGKTIVFTQTKRDADEVS+AL++SI SEALHGDISQHQRERTL GF
Sbjct: 358  KRTILGDLITVYAKGGKTIVFTQTKRDADEVSLALTSSITSEALHGDISQHQRERTLNGF 417

Query: 541  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 720
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEG AILMFT 
Sbjct: 418  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTG 477

Query: 721  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 900
            SQRRT+KSLERDVGC FEF+SPP M+EVLESSAEQVVATL+GVH +SIQ+FLP AQR+ +
Sbjct: 478  SQRRTIKSLERDVGCSFEFISPPQMEEVLESSAEQVVATLKGVHPESIQFFLPAAQRMIE 537

Query: 901  EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1080
            EQGT          SGFSQPPSSRSL++HEQGWVTLQLTRE G+SRG+ SARSVTGFLSD
Sbjct: 538  EQGTDALAAALAHLSGFSQPPSSRSLVTHEQGWVTLQLTREQGFSRGFLSARSVTGFLSD 597

Query: 1081 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 1260
            +YP AADEVGKI +IADE+VQGAVFDLPEEIAKELLTKQ PPGN++ KITKLP LQDDGP
Sbjct: 598  IYPAAADEVGKIHLIADERVQGAVFDLPEEIAKELLTKQTPPGNTISKITKLPPLQDDGP 657

Query: 1261 ATDFYGRFXXXXXXXXXXXXXXXXXXXXXXWGGRNYDSDDSYGRGGRISDDSYGWGGRAS 1440
            + D YGRF                      WG  + D +D + RGGR       + G +S
Sbjct: 658  SGDNYGRFPSRDRGGRGGLRDRGGFRGSRNWGRSDSDDEDQFRRGGR------NFRGGSS 711

Query: 1441 RTDSSWSRNTKPRRDSEDDWLIGGRRSSRTPSFGNRERGFAGACFNCGRSGHRASECPNN 1620
            ++ +SW      R + +DDWLIG RRS+R+ SFG+R+R F GACF CGR+GHRA++CP+ 
Sbjct: 712  QSRNSW------RSNDDDDWLIGNRRSNRSSSFGSRDRSFGGACFVCGRAGHRAADCPSK 765

Query: 1621 K 1623
            +
Sbjct: 766  Q 766


>ref|XP_002330044.1| predicted protein [Populus trichocarpa]
            gi|566168507|ref|XP_006382239.1| hypothetical protein
            POPTR_0005s00240g [Populus trichocarpa]
            gi|550337590|gb|ERP60036.1| hypothetical protein
            POPTR_0005s00240g [Populus trichocarpa]
          Length = 775

 Score =  776 bits (2005), Expect = 0.0
 Identities = 402/544 (73%), Positives = 452/544 (83%), Gaps = 3/544 (0%)
 Frame = +1

Query: 1    AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 180
            +Y  Q+++LSRGVDVVVGTPGRIIDL+  +SL+LGEV+YLVLDEADQML+ GFEEDVEVI
Sbjct: 248  SYVTQQSALSRGVDVVVGTPGRIIDLLKGNSLKLGEVEYLVLDEADQMLSFGFEEDVEVI 307

Query: 181  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 360
            L+ LP +RQ+MLFSATMP WVKKL+R+YL+NPL IDLVGDQ+EKLAEGIKLYA+S TA S
Sbjct: 308  LENLPSKRQSMLFSATMPTWVKKLARKYLDNPLQIDLVGDQEEKLAEGIKLYALSATAAS 367

Query: 361  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 540
            KRTILSDL+TVYAKGGKTI+FTQTKRDADEVSMAL+N+IASEALHGDISQHQRERTL GF
Sbjct: 368  KRTILSDLVTVYAKGGKTIIFTQTKRDADEVSMALTNTIASEALHGDISQHQRERTLNGF 427

Query: 541  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 720
            RQGKFTVLVATDVA+RGLDIPNVDLIIHYELPND ETFVHRSGRTGRAGKEG AILMFTS
Sbjct: 428  RQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDAETFVHRSGRTGRAGKEGTAILMFTS 487

Query: 721  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 900
            SQRRTV+SLERD GC+FEFVSPP+++EVLESSAEQVVATL GVH +S+++F PTAQ+L +
Sbjct: 488  SQRRTVRSLERDAGCKFEFVSPPAIEEVLESSAEQVVATLSGVHPESVEFFTPTAQKLIE 547

Query: 901  EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1080
            EQGT          SGFSQPPSSRSLISH QGW TLQLTR+P YSRG+ SARSVTGFLSD
Sbjct: 548  EQGTNALAAALAHLSGFSQPPSSRSLISHAQGWATLQLTRDPTYSRGFLSARSVTGFLSD 607

Query: 1081 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 1260
            VYP AADEVGKI +IADE+VQGAVFDLPEEIAKELL KQ+PPGN++ KITKLP LQDDGP
Sbjct: 608  VYPAAADEVGKIHVIADERVQGAVFDLPEEIAKELLNKQIPPGNTIAKITKLPALQDDGP 667

Query: 1261 ATDFYGRFXXXXXXXXXXXXXXXXXXXXXXWGGRNYDSDDSYGRG-GRISDD--SYGWGG 1431
              DFYGRF                        G+      S GRG GR SDD  +Y  GG
Sbjct: 668  PGDFYGRFSSRDRPARGGPR------------GQRGGFRSSRGRGSGRDSDDGGTYRRGG 715

Query: 1432 RASRTDSSWSRNTKPRRDSEDDWLIGGRRSSRTPSFGNRERGFAGACFNCGRSGHRASEC 1611
            R++  ++SWS+ +   R S DDWLIGGRRSSR PS   R+R F G+CFNCGRSGHRASEC
Sbjct: 716  RSNSNENSWSQMS---RSSGDDWLIGGRRSSRPPS---RDRSFGGSCFNCGRSGHRASEC 769

Query: 1612 PNNK 1623
            PN K
Sbjct: 770  PNKK 773


>ref|XP_006480317.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            isoform X3 [Citrus sinensis]
          Length = 766

 Score =  773 bits (1997), Expect = 0.0
 Identities = 401/548 (73%), Positives = 456/548 (83%), Gaps = 9/548 (1%)
 Frame = +1

Query: 1    AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 180
            +YN Q+N+LSRGVDVVVGTPGRIIDLIN+ SL+LGEV+YLVLDEADQMLAVGFEEDVE+I
Sbjct: 238  SYNTQQNALSRGVDVVVGTPGRIIDLINNSSLKLGEVEYLVLDEADQMLAVGFEEDVELI 297

Query: 181  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 360
            L+ LPP+RQ+MLFSATMP WVKKLSR+YL+NPL IDLVG+QDEKLAEGIKLYAISTTATS
Sbjct: 298  LENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS 357

Query: 361  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 540
            KRTILSDLITVYAKGGKTIVFTQTKRDADEVS+AL++ IASEALHGDISQHQRERTL GF
Sbjct: 358  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGF 417

Query: 541  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 720
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEG AILMFTS
Sbjct: 418  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTS 477

Query: 721  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 900
            SQRRTV+SLERDVGC+FEFVSPP +++VLESSAEQVVATL GVH +S+++F PTAQRL +
Sbjct: 478  SQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIE 537

Query: 901  EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1080
            E+GT          SGFS+PPSSRSLI+HEQGWVTLQLTR+  +SRG+ SARSV GFLSD
Sbjct: 538  EKGTDALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSD 597

Query: 1081 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 1260
            VYP AADE+GKI +IAD++VQGAVFDLPEEIAKELL KQ+PPGN++ KITKLP+LQDDGP
Sbjct: 598  VYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTISKITKLPVLQDDGP 657

Query: 1261 ATDFYGRFXXXXXXXXXXXXXXXXXXXXXXWGGRNYDSDDSYGRGGRI-----SDDSYGW 1425
            ++D YGRF                       GG  +    + G G R      SDD  G+
Sbjct: 658  SSDNYGRFSSGDRFSRG--------------GGSRFSRGGARGGGFRSSRSWGSDDEDGF 703

Query: 1426 ----GGRASRTDSSWSRNTKPRRDSEDDWLIGGRRSSRTPSFGNRERGFAGACFNCGRSG 1593
                GGR+ R+ +  ++ ++    S+DDWLIGG RSSR+ S   R+R F GACFNCGRSG
Sbjct: 704  SSSRGGRSFRSGN--NQGSRFSTSSDDDWLIGGSRSSRSSS---RDRSFGGACFNCGRSG 758

Query: 1594 HRASECPN 1617
            HRASECPN
Sbjct: 759  HRASECPN 766


>ref|XP_002512602.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223548563|gb|EEF50054.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 772

 Score =  772 bits (1993), Expect = 0.0
 Identities = 403/554 (72%), Positives = 439/554 (79%), Gaps = 15/554 (2%)
 Frame = +1

Query: 1    AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 180
            +Y  Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEV+YLVLDEADQML+ GFEEDVEVI
Sbjct: 233  SYITQRNALSRGVDVVVGTPGRIIDLINSGSLKLGEVEYLVLDEADQMLSFGFEEDVEVI 292

Query: 181  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 360
            L+ LP +RQ+MLFSATMP WVKKL+R+YL+NPL IDLVGDQ+EKLAEGIKLYAIST ATS
Sbjct: 293  LENLPSKRQSMLFSATMPTWVKKLARKYLDNPLQIDLVGDQEEKLAEGIKLYAISTNATS 352

Query: 361  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 540
            KR+ILSDL+TVYAKGGKTI+FTQTKRDADEVSM L+NSIASEALHGDISQHQRERTL GF
Sbjct: 353  KRSILSDLVTVYAKGGKTIIFTQTKRDADEVSMVLTNSIASEALHGDISQHQRERTLNGF 412

Query: 541  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 720
            RQGKFTVLVATDVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRTGRAGKEG A+LMFTS
Sbjct: 413  RQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAVLMFTS 472

Query: 721  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 900
            SQRRTVKSLERDVGCRFEFVSPP  +EVLESSAEQV+ATL GVH +S+ +F PTAQRL +
Sbjct: 473  SQRRTVKSLERDVGCRFEFVSPPGTEEVLESSAEQVIATLSGVHPESVGFFTPTAQRLIE 532

Query: 901  EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1080
            EQGT          SGFSQPPSSRSLISHEQGW TLQLTR+P YSRG+ SARSVTGFLSD
Sbjct: 533  EQGTSALAAALAQLSGFSQPPSSRSLISHEQGWTTLQLTRDPSYSRGFLSARSVTGFLSD 592

Query: 1081 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 1260
            VY  AADEVGKI +IADEKVQGAVFDLPEEIAKELL KQLPPGN++ KITKLP LQDDGP
Sbjct: 593  VYTAAADEVGKIHIIADEKVQGAVFDLPEEIAKELLNKQLPPGNTISKITKLPSLQDDGP 652

Query: 1261 ATDFYGRFXXXXXXXXXXXXXXXXXXXXXXWGGRNYDSDDSYGRGGRISDDSYGWGGRAS 1440
             +DFYGRF                      WGG         GRGGR SDD      R  
Sbjct: 653  PSDFYGRFSSRDRPPRGGGRGQRGSRSSQGWGG---------GRGGRNSDDDDDTFRRGG 703

Query: 1441 RTDSSWSRNTKPRRDSEDDWLIGGRRSSRTPSFGN---------------RERGFAGACF 1575
            R+ S         R S DDWLIGG RSSR    G                R+R F G+CF
Sbjct: 704  RSFS---------RSSSDDWLIGGGRSSRPSPRGRSSPRDWSSPRDRSSPRDRSFGGSCF 754

Query: 1576 NCGRSGHRASECPN 1617
            NCGRSGHRAS+CPN
Sbjct: 755  NCGRSGHRASDCPN 768


>ref|XP_006480315.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            isoform X1 [Citrus sinensis]
          Length = 768

 Score =  771 bits (1990), Expect = 0.0
 Identities = 400/548 (72%), Positives = 455/548 (83%), Gaps = 9/548 (1%)
 Frame = +1

Query: 1    AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 180
            +YN Q+N+LSRGVDVVVGTPGRIIDLIN+ SL+LGEV+YLVLDEADQMLAVGFEEDVE+I
Sbjct: 238  SYNTQQNALSRGVDVVVGTPGRIIDLINNSSLKLGEVEYLVLDEADQMLAVGFEEDVELI 297

Query: 181  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 360
            L+ LPP+RQ+MLFSATMP WVKKLSR+YL+NPL IDLVG+QDEKLAEGIKLYAISTTATS
Sbjct: 298  LENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS 357

Query: 361  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 540
            KRTILSDLITVYAKGGKTIVFTQTKRDADEVS+AL++ IASEALHGDISQHQRERTL GF
Sbjct: 358  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGF 417

Query: 541  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 720
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEG AILMFTS
Sbjct: 418  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTS 477

Query: 721  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 900
            SQRRTV+SLERDVGC+FEFVSPP +++VLESSAEQVVATL GVH +S+++F PTAQRL +
Sbjct: 478  SQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIE 537

Query: 901  EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1080
            E+GT          SGFS+PPSSRSLI+HEQGWVTLQLTR+  +SRG+ SARSV GFLSD
Sbjct: 538  EKGTDALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSD 597

Query: 1081 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 1260
            VYP AADE+GKI +IAD++VQGAVFDLPEEIAKELL KQ+PPGN++ KITKLP+LQDDGP
Sbjct: 598  VYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTISKITKLPVLQDDGP 657

Query: 1261 ATDFYGRFXXXXXXXXXXXXXXXXXXXXXXWGGRNYDSDDSYGRGGRI-----SDDSYGW 1425
            ++D YGRF                       GG  +    + G G R      SDD  G+
Sbjct: 658  SSDNYGRFSSGDRFSRG--------------GGSRFSRGGARGGGFRSSRSWGSDDEDGF 703

Query: 1426 ----GGRASRTDSSWSRNTKPRRDSEDDWLIGGRRSSRTPSFGNRERGFAGACFNCGRSG 1593
                GGR+ R+ +  ++ ++    S+DDWLIGG RSSR+ S  +  R F GACFNCGRSG
Sbjct: 704  SSSRGGRSFRSGN--NQGSRFSTSSDDDWLIGGSRSSRSSS-RDSSRSFGGACFNCGRSG 760

Query: 1594 HRASECPN 1617
            HRASECPN
Sbjct: 761  HRASECPN 768


>ref|XP_006423936.1| hypothetical protein CICLE_v10027858mg [Citrus clementina]
            gi|557525870|gb|ESR37176.1| hypothetical protein
            CICLE_v10027858mg [Citrus clementina]
          Length = 780

 Score =  771 bits (1990), Expect = 0.0
 Identities = 400/548 (72%), Positives = 455/548 (83%), Gaps = 9/548 (1%)
 Frame = +1

Query: 1    AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 180
            +YN Q+N+LSRGVDVVVGTPGRIIDLIN+ SL+LGEV+YLVLDEADQMLAVGFEEDVE+I
Sbjct: 238  SYNTQQNALSRGVDVVVGTPGRIIDLINNSSLKLGEVEYLVLDEADQMLAVGFEEDVELI 297

Query: 181  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 360
            L+ LPP+RQ+MLFSATMP WVKKLSR+YL+NPL IDLVG+QDEKLAEGIKLYAISTTATS
Sbjct: 298  LENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS 357

Query: 361  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 540
            KRTILSDLITVYAKGGKTIVFTQTKRDADEVS+AL++ IASEALHGDISQHQRERTL GF
Sbjct: 358  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGF 417

Query: 541  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 720
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEG AILMFTS
Sbjct: 418  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTS 477

Query: 721  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 900
            SQRRTV+SLERDVGC+FEFVSPP +++VLESSAEQVVATL GVH +S+++F PTAQRL +
Sbjct: 478  SQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIE 537

Query: 901  EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1080
            E+GT          SGFS+PPSSRSLI+HEQGWVTLQLTR+  +SRG+ SARSV GFLSD
Sbjct: 538  EKGTDALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSD 597

Query: 1081 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 1260
            VYP AADE+GKI +IAD++VQGAVFDLPEEIAKELL KQ+PPGN++ KITKLP+LQDDGP
Sbjct: 598  VYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTISKITKLPVLQDDGP 657

Query: 1261 ATDFYGRFXXXXXXXXXXXXXXXXXXXXXXWGGRNYDSDDSYGRGGRI-----SDDSYGW 1425
            ++D YGRF                       GG  +    + G G R      SDD  G+
Sbjct: 658  SSDNYGRFSSGDRFSRGGGSRFSRGGARG--GGSRFSRGGARGGGFRSSRSWGSDDEDGF 715

Query: 1426 ----GGRASRTDSSWSRNTKPRRDSEDDWLIGGRRSSRTPSFGNRERGFAGACFNCGRSG 1593
                GGR+ R+ +  ++ ++    S+DDWLIGG RSSR+ S  +  R F GACFNCGRSG
Sbjct: 716  SSSRGGRSFRSGN--NQGSRFSTSSDDDWLIGGSRSSRSSS-RDSSRSFGGACFNCGRSG 772

Query: 1594 HRASECPN 1617
            HRASECPN
Sbjct: 773  HRASECPN 780


>ref|XP_006480316.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            isoform X2 [Citrus sinensis]
          Length = 767

 Score =  770 bits (1989), Expect = 0.0
 Identities = 400/548 (72%), Positives = 454/548 (82%), Gaps = 9/548 (1%)
 Frame = +1

Query: 1    AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 180
            +YN Q+N+LSRGVDVVVGTPGRIIDLIN+ SL+LGEV+YLVLDEADQMLAVGFEEDVE+I
Sbjct: 238  SYNTQQNALSRGVDVVVGTPGRIIDLINNSSLKLGEVEYLVLDEADQMLAVGFEEDVELI 297

Query: 181  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 360
            L+ LPP+RQ+MLFSATMP WVKKLSR+YL+NPL IDLVG+QDEKLAEGIKLYAISTTATS
Sbjct: 298  LENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS 357

Query: 361  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 540
            KRTILSDLITVYAKGGKTIVFTQTKRDADEVS+AL++ IASEALHGDISQHQRERTL GF
Sbjct: 358  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGF 417

Query: 541  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 720
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEG AILMFTS
Sbjct: 418  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTS 477

Query: 721  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 900
            SQRRTV+SLERDVGC+FEFVSPP +++VLESSAEQVVATL GVH +S+++F PTAQRL +
Sbjct: 478  SQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIE 537

Query: 901  EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1080
            E+GT          SGFS+PPSSRSLI+HEQGWVTLQLTR+  +SRG+ SARSV GFLSD
Sbjct: 538  EKGTDALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSD 597

Query: 1081 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 1260
            VYP AADE+GKI +IAD++VQGAVFDLPEEIAKELL KQ+PPGN++ KITKLP+LQDDGP
Sbjct: 598  VYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTISKITKLPVLQDDGP 657

Query: 1261 ATDFYGRFXXXXXXXXXXXXXXXXXXXXXXWGGRNYDSDDSYGRGGRI-----SDDSYGW 1425
            ++D YGRF                       GG  +    + G G R      SDD  G+
Sbjct: 658  SSDNYGRFSSGDRFSRG--------------GGSRFSRGGARGGGFRSSRSWGSDDEDGF 703

Query: 1426 ----GGRASRTDSSWSRNTKPRRDSEDDWLIGGRRSSRTPSFGNRERGFAGACFNCGRSG 1593
                GGR+ R+ +  ++ ++    S+DDWLIGG RSSR+ S     R F GACFNCGRSG
Sbjct: 704  SSSRGGRSFRSGN--NQGSRFSTSSDDDWLIGGSRSSRSSS--RDSRSFGGACFNCGRSG 759

Query: 1594 HRASECPN 1617
            HRASECPN
Sbjct: 760  HRASECPN 767


>ref|XP_006423935.1| hypothetical protein CICLE_v10027858mg [Citrus clementina]
            gi|567862566|ref|XP_006423937.1| hypothetical protein
            CICLE_v10027858mg [Citrus clementina]
            gi|557525869|gb|ESR37175.1| hypothetical protein
            CICLE_v10027858mg [Citrus clementina]
            gi|557525871|gb|ESR37177.1| hypothetical protein
            CICLE_v10027858mg [Citrus clementina]
          Length = 779

 Score =  770 bits (1989), Expect = 0.0
 Identities = 400/548 (72%), Positives = 454/548 (82%), Gaps = 9/548 (1%)
 Frame = +1

Query: 1    AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 180
            +YN Q+N+LSRGVDVVVGTPGRIIDLIN+ SL+LGEV+YLVLDEADQMLAVGFEEDVE+I
Sbjct: 238  SYNTQQNALSRGVDVVVGTPGRIIDLINNSSLKLGEVEYLVLDEADQMLAVGFEEDVELI 297

Query: 181  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 360
            L+ LPP+RQ+MLFSATMP WVKKLSR+YL+NPL IDLVG+QDEKLAEGIKLYAISTTATS
Sbjct: 298  LENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS 357

Query: 361  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 540
            KRTILSDLITVYAKGGKTIVFTQTKRDADEVS+AL++ IASEALHGDISQHQRERTL GF
Sbjct: 358  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGF 417

Query: 541  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 720
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEG AILMFTS
Sbjct: 418  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTS 477

Query: 721  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 900
            SQRRTV+SLERDVGC+FEFVSPP +++VLESSAEQVVATL GVH +S+++F PTAQRL +
Sbjct: 478  SQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIE 537

Query: 901  EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1080
            E+GT          SGFS+PPSSRSLI+HEQGWVTLQLTR+  +SRG+ SARSV GFLSD
Sbjct: 538  EKGTDALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSD 597

Query: 1081 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 1260
            VYP AADE+GKI +IAD++VQGAVFDLPEEIAKELL KQ+PPGN++ KITKLP+LQDDGP
Sbjct: 598  VYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTISKITKLPVLQDDGP 657

Query: 1261 ATDFYGRFXXXXXXXXXXXXXXXXXXXXXXWGGRNYDSDDSYGRGGRI-----SDDSYGW 1425
            ++D YGRF                       GG  +    + G G R      SDD  G+
Sbjct: 658  SSDNYGRFSSGDRFSRGGGSRFSRGGARG--GGSRFSRGGARGGGFRSSRSWGSDDEDGF 715

Query: 1426 ----GGRASRTDSSWSRNTKPRRDSEDDWLIGGRRSSRTPSFGNRERGFAGACFNCGRSG 1593
                GGR+ R+ +  ++ ++    S+DDWLIGG RSSR+ S     R F GACFNCGRSG
Sbjct: 716  SSSRGGRSFRSGN--NQGSRFSTSSDDDWLIGGSRSSRSSS--RDSRSFGGACFNCGRSG 771

Query: 1594 HRASECPN 1617
            HRASECPN
Sbjct: 772  HRASECPN 779


>gb|ABF99668.1| DEAD/DEAH box helicase family protein, expressed [Oryza sativa
            Japonica Group]
          Length = 596

 Score =  769 bits (1985), Expect = 0.0
 Identities = 399/548 (72%), Positives = 449/548 (81%), Gaps = 9/548 (1%)
 Frame = +1

Query: 1    AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 180
            +YN+Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEV+YLVLDEADQMLAVGFEEDVE I
Sbjct: 56   SYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETI 115

Query: 181  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 360
            LQ+LP +RQ+MLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAI  T+TS
Sbjct: 116  LQQLPAERQSMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTSTS 175

Query: 361  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 540
            KRT+LSDLITVYAKGGKTIVFT+TKRDADEVS+AL+NSIASEALHGDISQHQRERTL GF
Sbjct: 176  KRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGF 235

Query: 541  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 720
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK G AILMFT+
Sbjct: 236  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTN 295

Query: 721  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 900
            SQRRTV+SLERDVGCRF+F+SPP++++VLESSAE V+ATLRGVH +SIQYF+P A+RL +
Sbjct: 296  SQRRTVRSLERDVGCRFDFISPPAIEDVLESSAEHVIATLRGVHTESIQYFIPAAERLQE 355

Query: 901  EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1080
            E G           SGFSQPPSSRSLISHEQGWVTLQLTR+PGY RG+FS RSVTGFLSD
Sbjct: 356  ELGPNALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTRDPGYGRGFFSPRSVTGFLSD 415

Query: 1081 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 1260
            V   AADEVGKI + ADEKVQGAVFDLPEEIA++LL+ +LPPGN++ K+TKLP LQDDGP
Sbjct: 416  VSSAAADEVGKIFLTADEKVQGAVFDLPEEIARDLLSMELPPGNTITKVTKLPALQDDGP 475

Query: 1261 ATDFYGRFXXXXXXXXXXXXXXXXXXXXXXWGGRNYDSDDSYGRGGRI--------SDDS 1416
            ATD YGRF                       GG + D +D + RGGR         SDD 
Sbjct: 476  ATDSYGRFSNSDRGFRNRRSRGGGSRGGR--GGWDSDGEDRFRRGGRSFRSDNDSWSDDD 533

Query: 1417 YGWGGRASRTDSSWSRNTKPRRDSEDDWLIGGRRSSRTPSFGNRE-RGFAGACFNCGRSG 1593
            +G G R++R+ S   R +     S   +  GGR S    SFG+R+ R F+GACFNCG SG
Sbjct: 534  FGGGRRSNRSSSFGGRGSSYGSRSSSSF--GGRSS----SFGSRDSRSFSGACFNCGESG 587

Query: 1594 HRASECPN 1617
            HRAS+CPN
Sbjct: 588  HRASDCPN 595


>gb|EEC76452.1| hypothetical protein OsI_14162 [Oryza sativa Indica Group]
          Length = 779

 Score =  768 bits (1984), Expect = 0.0
 Identities = 399/549 (72%), Positives = 449/549 (81%), Gaps = 10/549 (1%)
 Frame = +1

Query: 1    AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 180
            +YN+Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEV+YLVLDEADQMLAVGFEEDVE I
Sbjct: 238  SYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETI 297

Query: 181  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 360
            LQ+LP +RQ+MLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAI  T+TS
Sbjct: 298  LQQLPAERQSMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTSTS 357

Query: 361  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 540
            KRT+LSDLITVYAKGGKTIVFT+TKRDADEVS+AL+NSIASEALHGDISQHQRERTL GF
Sbjct: 358  KRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGF 417

Query: 541  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 720
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK G AILMFT+
Sbjct: 418  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTN 477

Query: 721  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 900
            SQRRTV+SLERDVGCRF+F+SPP++++VLESSAE V+ATLRGVH +SIQYF+P A+RL +
Sbjct: 478  SQRRTVRSLERDVGCRFDFISPPAIEDVLESSAEHVIATLRGVHTESIQYFIPAAERLQE 537

Query: 901  EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1080
            E G           SGFSQPPSSRSLISHEQGWVTLQLTR+PGY RG+FS RSVTGFLSD
Sbjct: 538  ELGPNALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTRDPGYGRGFFSPRSVTGFLSD 597

Query: 1081 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 1260
            V   AADEVGKI + ADEKVQGAVFDLPEEIA++LL+ +LPPGN++ K+TKLP LQDDGP
Sbjct: 598  VSSAAADEVGKIFLTADEKVQGAVFDLPEEIARDLLSMELPPGNTITKVTKLPALQDDGP 657

Query: 1261 ATDFYGRFXXXXXXXXXXXXXXXXXXXXXXWGGRNYDSDDSYGRGGRI--------SDDS 1416
            ATD YGRF                       GG + D +D + RGGR         SDD 
Sbjct: 658  ATDSYGRFSNSDRGFRNRRSRGGGSRGGR--GGWDSDGEDRFRRGGRSFRSDNDSWSDDD 715

Query: 1417 YGWGGRASRTDSSWSRNTKPRRDSEDDWLIGGRRSSRTPSFGNRE--RGFAGACFNCGRS 1590
            +G G R++R+ S   R +     S   +  GGR S    SFG+R+  R F+GACFNCG S
Sbjct: 716  FGGGRRSNRSSSFGGRGSSYGSRSSSSF--GGRSS----SFGSRDSSRSFSGACFNCGES 769

Query: 1591 GHRASECPN 1617
            GHRAS+CPN
Sbjct: 770  GHRASDCPN 778


>ref|NP_001051773.1| Os03g0827700 [Oryza sativa Japonica Group]
            gi|113550244|dbj|BAF13687.1| Os03g0827700, partial [Oryza
            sativa Japonica Group]
          Length = 723

 Score =  768 bits (1984), Expect = 0.0
 Identities = 399/549 (72%), Positives = 449/549 (81%), Gaps = 10/549 (1%)
 Frame = +1

Query: 1    AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 180
            +YN+Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEV+YLVLDEADQMLAVGFEEDVE I
Sbjct: 182  SYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETI 241

Query: 181  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 360
            LQ+LP +RQ+MLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAI  T+TS
Sbjct: 242  LQQLPAERQSMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTSTS 301

Query: 361  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 540
            KRT+LSDLITVYAKGGKTIVFT+TKRDADEVS+AL+NSIASEALHGDISQHQRERTL GF
Sbjct: 302  KRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGF 361

Query: 541  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 720
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK G AILMFT+
Sbjct: 362  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTN 421

Query: 721  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 900
            SQRRTV+SLERDVGCRF+F+SPP++++VLESSAE V+ATLRGVH +SIQYF+P A+RL +
Sbjct: 422  SQRRTVRSLERDVGCRFDFISPPAIEDVLESSAEHVIATLRGVHTESIQYFIPAAERLQE 481

Query: 901  EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1080
            E G           SGFSQPPSSRSLISHEQGWVTLQLTR+PGY RG+FS RSVTGFLSD
Sbjct: 482  ELGPNALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTRDPGYGRGFFSPRSVTGFLSD 541

Query: 1081 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 1260
            V   AADEVGKI + ADEKVQGAVFDLPEEIA++LL+ +LPPGN++ K+TKLP LQDDGP
Sbjct: 542  VSSAAADEVGKIFLTADEKVQGAVFDLPEEIARDLLSMELPPGNTITKVTKLPALQDDGP 601

Query: 1261 ATDFYGRFXXXXXXXXXXXXXXXXXXXXXXWGGRNYDSDDSYGRGGRI--------SDDS 1416
            ATD YGRF                       GG + D +D + RGGR         SDD 
Sbjct: 602  ATDSYGRFSNSDRGFRNRRSRGGGSRGGR--GGWDSDGEDRFRRGGRSFRSDNDSWSDDD 659

Query: 1417 YGWGGRASRTDSSWSRNTKPRRDSEDDWLIGGRRSSRTPSFGNRE--RGFAGACFNCGRS 1590
            +G G R++R+ S   R +     S   +  GGR S    SFG+R+  R F+GACFNCG S
Sbjct: 660  FGGGRRSNRSSSFGGRGSSYGSRSSSSF--GGRSS----SFGSRDSSRSFSGACFNCGES 713

Query: 1591 GHRASECPN 1617
            GHRAS+CPN
Sbjct: 714  GHRASDCPN 722


>gb|ABF99667.1| DEAD/DEAH box helicase family protein, expressed [Oryza sativa
            Japonica Group] gi|215686855|dbj|BAG89705.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 597

 Score =  768 bits (1984), Expect = 0.0
 Identities = 399/549 (72%), Positives = 449/549 (81%), Gaps = 10/549 (1%)
 Frame = +1

Query: 1    AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 180
            +YN+Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEV+YLVLDEADQMLAVGFEEDVE I
Sbjct: 56   SYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETI 115

Query: 181  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 360
            LQ+LP +RQ+MLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAI  T+TS
Sbjct: 116  LQQLPAERQSMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTSTS 175

Query: 361  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 540
            KRT+LSDLITVYAKGGKTIVFT+TKRDADEVS+AL+NSIASEALHGDISQHQRERTL GF
Sbjct: 176  KRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGF 235

Query: 541  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 720
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK G AILMFT+
Sbjct: 236  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTN 295

Query: 721  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 900
            SQRRTV+SLERDVGCRF+F+SPP++++VLESSAE V+ATLRGVH +SIQYF+P A+RL +
Sbjct: 296  SQRRTVRSLERDVGCRFDFISPPAIEDVLESSAEHVIATLRGVHTESIQYFIPAAERLQE 355

Query: 901  EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1080
            E G           SGFSQPPSSRSLISHEQGWVTLQLTR+PGY RG+FS RSVTGFLSD
Sbjct: 356  ELGPNALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTRDPGYGRGFFSPRSVTGFLSD 415

Query: 1081 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 1260
            V   AADEVGKI + ADEKVQGAVFDLPEEIA++LL+ +LPPGN++ K+TKLP LQDDGP
Sbjct: 416  VSSAAADEVGKIFLTADEKVQGAVFDLPEEIARDLLSMELPPGNTITKVTKLPALQDDGP 475

Query: 1261 ATDFYGRFXXXXXXXXXXXXXXXXXXXXXXWGGRNYDSDDSYGRGGRI--------SDDS 1416
            ATD YGRF                       GG + D +D + RGGR         SDD 
Sbjct: 476  ATDSYGRFSNSDRGFRNRRSRGGGSRGGR--GGWDSDGEDRFRRGGRSFRSDNDSWSDDD 533

Query: 1417 YGWGGRASRTDSSWSRNTKPRRDSEDDWLIGGRRSSRTPSFGNRE--RGFAGACFNCGRS 1590
            +G G R++R+ S   R +     S   +  GGR S    SFG+R+  R F+GACFNCG S
Sbjct: 534  FGGGRRSNRSSSFGGRGSSYGSRSSSSF--GGRSS----SFGSRDSSRSFSGACFNCGES 587

Query: 1591 GHRASECPN 1617
            GHRAS+CPN
Sbjct: 588  GHRASDCPN 596


>sp|Q0DM51.2|RH3_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 3, chloroplastic;
            Flags: Precursor gi|18855061|gb|AAL79753.1|AC096687_17
            putative RNA helicase [Oryza sativa Japonica Group]
          Length = 758

 Score =  768 bits (1984), Expect = 0.0
 Identities = 399/549 (72%), Positives = 449/549 (81%), Gaps = 10/549 (1%)
 Frame = +1

Query: 1    AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 180
            +YN+Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEV+YLVLDEADQMLAVGFEEDVE I
Sbjct: 217  SYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETI 276

Query: 181  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 360
            LQ+LP +RQ+MLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAI  T+TS
Sbjct: 277  LQQLPAERQSMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTSTS 336

Query: 361  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 540
            KRT+LSDLITVYAKGGKTIVFT+TKRDADEVS+AL+NSIASEALHGDISQHQRERTL GF
Sbjct: 337  KRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGF 396

Query: 541  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 720
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK G AILMFT+
Sbjct: 397  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTN 456

Query: 721  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 900
            SQRRTV+SLERDVGCRF+F+SPP++++VLESSAE V+ATLRGVH +SIQYF+P A+RL +
Sbjct: 457  SQRRTVRSLERDVGCRFDFISPPAIEDVLESSAEHVIATLRGVHTESIQYFIPAAERLQE 516

Query: 901  EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1080
            E G           SGFSQPPSSRSLISHEQGWVTLQLTR+PGY RG+FS RSVTGFLSD
Sbjct: 517  ELGPNALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTRDPGYGRGFFSPRSVTGFLSD 576

Query: 1081 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 1260
            V   AADEVGKI + ADEKVQGAVFDLPEEIA++LL+ +LPPGN++ K+TKLP LQDDGP
Sbjct: 577  VSSAAADEVGKIFLTADEKVQGAVFDLPEEIARDLLSMELPPGNTITKVTKLPALQDDGP 636

Query: 1261 ATDFYGRFXXXXXXXXXXXXXXXXXXXXXXWGGRNYDSDDSYGRGGRI--------SDDS 1416
            ATD YGRF                       GG + D +D + RGGR         SDD 
Sbjct: 637  ATDSYGRFSNSDRGFRNRRSRGGGSRGGR--GGWDSDGEDRFRRGGRSFRSDNDSWSDDD 694

Query: 1417 YGWGGRASRTDSSWSRNTKPRRDSEDDWLIGGRRSSRTPSFGNRE--RGFAGACFNCGRS 1590
            +G G R++R+ S   R +     S   +  GGR S    SFG+R+  R F+GACFNCG S
Sbjct: 695  FGGGRRSNRSSSFGGRGSSYGSRSSSSF--GGRSS----SFGSRDSSRSFSGACFNCGES 748

Query: 1591 GHRASECPN 1617
            GHRAS+CPN
Sbjct: 749  GHRASDCPN 757


>ref|XP_006650834.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Oryza brachyantha]
          Length = 599

 Score =  766 bits (1977), Expect = 0.0
 Identities = 404/567 (71%), Positives = 450/567 (79%), Gaps = 28/567 (4%)
 Frame = +1

Query: 1    AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 180
            +YN+Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEV+YLVLDEADQMLAVGFEEDVE I
Sbjct: 56   SYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETI 115

Query: 181  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 360
            LQ+LP +RQ+MLFSATMP WVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKL+AI  T+TS
Sbjct: 116  LQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLHAIPLTSTS 175

Query: 361  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 540
            KRT+LSDLITVYAKGGKTIVFT+TKRDADEVS+AL+NSIASEALHGDISQHQRERTL GF
Sbjct: 176  KRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGF 235

Query: 541  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 720
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK G AILMFT+
Sbjct: 236  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTN 295

Query: 721  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 900
            SQRRTV+SLERDVGCRFEF+SPP+++EVLESSAE V+ATLRGVHA+SIQYF+P A+RLT+
Sbjct: 296  SQRRTVRSLERDVGCRFEFISPPAIEEVLESSAEHVIATLRGVHAESIQYFIPAAERLTE 355

Query: 901  EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1080
            E G           SGFSQPPSSRSLISHEQGWVTLQLTRE GY RG+FS RSVTGFLSD
Sbjct: 356  ELGPNALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTREQGYGRGFFSPRSVTGFLSD 415

Query: 1081 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 1260
            V   AADEVGKI +IADE+VQGAVFDLPEEIAK+LL+ +LPPGN++ K+TKLP LQDDGP
Sbjct: 416  VSSAAADEVGKIYLIADERVQGAVFDLPEEIAKDLLSMELPPGNTITKVTKLPALQDDGP 475

Query: 1261 ATDFYGRFXXXXXXXXXXXXXXXXXXXXXXWGGRNYDSDDSYGRGGRISD--DSYGWGGR 1434
            ATD YGRF                      +  R        GRGG  SD  D +  GGR
Sbjct: 476  ATDSYGRF----------------SNSDRGFRSRRTRGGSRGGRGGWDSDGEDRFRRGGR 519

Query: 1435 ASRTDS-SWSRNTKPRRDSEDDWLIGGRRSSRTPSFGNR--------------------- 1548
            + R+D+ SWS       + +DDW  GGRRS+R+ SFG R                     
Sbjct: 520  SFRSDNDSWS-------EKDDDW-SGGRRSNRSSSFGGRSSSYGSRSSSSSFGGRSSSFG 571

Query: 1549 ----ERGFAGACFNCGRSGHRASECPN 1617
                 R F GACFNCG +GHRAS+CPN
Sbjct: 572  ARDSSRSFGGACFNCGEAGHRASDCPN 598


>gb|EXB57576.1| DEAD-box ATP-dependent RNA helicase 3 [Morus notabilis]
          Length = 810

 Score =  765 bits (1975), Expect = 0.0
 Identities = 397/552 (71%), Positives = 451/552 (81%), Gaps = 13/552 (2%)
 Frame = +1

Query: 1    AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 180
            +Y  Q+N+LSRGVDVVVGTPGR+IDLIN  SL+LGEVQYLVLDEADQMLAVGFEEDVEVI
Sbjct: 225  SYITQQNALSRGVDVVVGTPGRLIDLINGGSLQLGEVQYLVLDEADQMLAVGFEEDVEVI 284

Query: 181  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 360
            L+KLP +RQ+MLFSATMP WVKKL+R+YL+NPLTIDLVG++DEKLAEGIKLYAISTTATS
Sbjct: 285  LEKLPSERQSMLFSATMPSWVKKLARKYLDNPLTIDLVGERDEKLAEGIKLYAISTTATS 344

Query: 361  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 540
            KRTILSDL+TVYAKGGKTIVFTQTKRDADEVSMAL+NSIASEALHGDISQHQRERTL GF
Sbjct: 345  KRTILSDLVTVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHQRERTLNGF 404

Query: 541  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 720
            RQGKFTVLVATDVAARGLDIPNVDL+IHYELPNDPETFVHRSGRTGRAGKEG AILMFTS
Sbjct: 405  RQGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTS 464

Query: 721  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 900
            SQRRTV+SLERDVGC+FEFVSPPS++EVLESSAE VVATL GVHA+S+++F PTAQ+L +
Sbjct: 465  SQRRTVRSLERDVGCKFEFVSPPSIEEVLESSAEHVVATLSGVHAESVEFFTPTAQKLIE 524

Query: 901  EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1080
            EQGT          SGF++PPSSRSLI+HEQG VTLQL R+P +SRG+ SARSVTGFLSD
Sbjct: 525  EQGTSALAAALAQLSGFARPPSSRSLINHEQGLVTLQLIRDPAFSRGFLSARSVTGFLSD 584

Query: 1081 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 1260
            VY  AADE+GK+ ++ADE+VQ AVFDLPEEIAKELL ++LP GN++ KITKLP LQDDGP
Sbjct: 585  VYSAAADELGKVYLVADERVQSAVFDLPEEIAKELLNRELPSGNTISKITKLPPLQDDGP 644

Query: 1261 ATDFYGRF-----XXXXXXXXXXXXXXXXXXXXXXWGGRNYDSDD---SYGRGGRISDDS 1416
            A+D+YGRF                            GG + D DD   S GR  R  ++S
Sbjct: 645  ASDYYGRFSSREHGGDRGSRRGSRGRGGFRGSRGRGGGFSDDEDDVFRSSGRSSRKPNNS 704

Query: 1417 YGWGGRASRTDSSWSRNTKPRRDSEDDWLIGGRRSSRTPSFG-----NRERGFAGACFNC 1581
            +  G R+S  D          R S DDWLIGGR+S  + S G     +R+R F G+CFNC
Sbjct: 705  WSRGSRSSSDDWLIGGRKSTPRSSSDDWLIGGRKSGSSWSQGSSRSSSRDRSFGGSCFNC 764

Query: 1582 GRSGHRASECPN 1617
            GRSGHRASECP+
Sbjct: 765  GRSGHRASECPD 776


>ref|XP_006382233.1| hypothetical protein POPTR_0005s00200g [Populus trichocarpa]
            gi|550337584|gb|ERP60030.1| hypothetical protein
            POPTR_0005s00200g [Populus trichocarpa]
          Length = 773

 Score =  765 bits (1975), Expect = 0.0
 Identities = 394/540 (72%), Positives = 447/540 (82%), Gaps = 1/540 (0%)
 Frame = +1

Query: 1    AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 180
            +Y  Q+N+LSRGVDVVVGTPGRIIDL+  +SL+LGEV+YLVLDEADQML+ GFEEDVEVI
Sbjct: 250  SYATQQNALSRGVDVVVGTPGRIIDLLKGNSLKLGEVEYLVLDEADQMLSFGFEEDVEVI 309

Query: 181  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 360
            L+ LP +RQ+MLFSATMP WVKKL+R+YL+NPL IDLVGD++EKLAEGIKLYAISTTATS
Sbjct: 310  LESLPSKRQSMLFSATMPTWVKKLARKYLDNPLQIDLVGDREEKLAEGIKLYAISTTATS 369

Query: 361  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 540
            KRTILSDL+TVYAKG KTI+FT+TKRDADEVSMAL+ SIASEALHGDISQHQRERTL GF
Sbjct: 370  KRTILSDLVTVYAKGEKTIIFTRTKRDADEVSMALTQSIASEALHGDISQHQRERTLNGF 429

Query: 541  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 720
            RQGKFTVLVATDVA+RGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEG AILMFT+
Sbjct: 430  RQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTN 489

Query: 721  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 900
            SQRRTV+SLERD GC+FEFVSPP+++E+LESS EQVVATL GVH +S+++F PTAQ+L +
Sbjct: 490  SQRRTVRSLERDAGCKFEFVSPPAIEELLESSTEQVVATLNGVHPESVEFFTPTAQKLIE 549

Query: 901  EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1080
            EQGT          SGFS+PPSSRSLISHEQGW TLQLTR+P YSRG+ SARSVTGFLSD
Sbjct: 550  EQGTSALAAALAHLSGFSRPPSSRSLISHEQGWTTLQLTRDPTYSRGFLSARSVTGFLSD 609

Query: 1081 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 1260
            VYP AADE+GKI +IADE+VQGAVFDLPEEIAKELL KQLPPGN++ KITKLP LQDDGP
Sbjct: 610  VYPAAADEIGKIHLIADERVQGAVFDLPEEIAKELLNKQLPPGNTIEKITKLPALQDDGP 669

Query: 1261 ATDFYGRFXXXXXXXXXXXXXXXXXXXXXXWGGRNYDSDDSYGRG-GRISDDSYGWGGRA 1437
             +DFYGRF                        G+      S G+G GR SDD  G   R 
Sbjct: 670  PSDFYGRFSSRDRPARGGPR------------GQRGGFRSSRGQGSGRYSDDE-GTNRRG 716

Query: 1438 SRTDSSWSRNTKPRRDSEDDWLIGGRRSSRTPSFGNRERGFAGACFNCGRSGHRASECPN 1617
             R++S+ +  +   R S DDWL+GGRRSSR  S   R+R F G+CFNCGRSGHRASECPN
Sbjct: 717  GRSNSNENTRSWMSRSSGDDWLVGGRRSSRPSS---RDRSFGGSCFNCGRSGHRASECPN 773


>gb|ACG27839.1| nucleolar RNA helicase 2 [Zea mays]
          Length = 744

 Score =  763 bits (1970), Expect = 0.0
 Identities = 401/549 (73%), Positives = 440/549 (80%), Gaps = 10/549 (1%)
 Frame = +1

Query: 1    AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 180
            +YN+Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEVQYLVLDEADQMLAVGFEEDVE I
Sbjct: 201  SYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVQYLVLDEADQMLAVGFEEDVETI 260

Query: 181  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 360
            LQ+LP  RQ+MLFSATMP WVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAI  TATS
Sbjct: 261  LQQLPAGRQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTATS 320

Query: 361  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 540
            KRT+LSDLITVYAKGGKTIVFT+TK+DADEVS+AL+NSIASEALHGDISQHQRERTL GF
Sbjct: 321  KRTVLSDLITVYAKGGKTIVFTRTKKDADEVSLALTNSIASEALHGDISQHQRERTLNGF 380

Query: 541  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 720
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK G AILMFTS
Sbjct: 381  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTS 440

Query: 721  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 900
            SQ+RTVKSLERDVGC FEF+SPPS++EVLESSAE V+ATLRGVH +S +YFL  A++LT+
Sbjct: 441  SQKRTVKSLERDVGCNFEFISPPSIEEVLESSAEHVIATLRGVHPESTKYFLGAAEKLTE 500

Query: 901  EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1080
            E G           SGFSQPPSSRSLISHEQGWVTLQLTRE G+ RG+FS RSVTGFLSD
Sbjct: 501  ELGPHALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTREQGFGRGFFSPRSVTGFLSD 560

Query: 1081 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 1260
            V   AADEVGKI + ADE VQGAVFDLPEEIAK+LLT +LPPGN+L KI+KLP LQDDGP
Sbjct: 561  VCSAAADEVGKIYLTADENVQGAVFDLPEEIAKDLLTMELPPGNTLTKISKLPALQDDGP 620

Query: 1261 ATDFYGRFXXXXXXXXXXXXXXXXXXXXXXWGGRNYDSDDSYGRGGRI--------SDDS 1416
            ATD YGRF                       GG + D +D + RGGR         SDD 
Sbjct: 621  ATDSYGRFSNDRGSRNNRRSRGGGASRGR--GGWDTDGEDRFRRGGRSLRSDNDSWSDDD 678

Query: 1417 YGWGGRASRTDSSWSRNTKPRRDSEDDWLIGGRRSSRTPSFGNRE--RGFAGACFNCGRS 1590
            +  GGR S   SS+   +     S      GGR S    SFG+RE  R F+GACFNCG S
Sbjct: 679  WSGGGRKSNRSSSFGSRSSSSYSSRGSPSFGGRSS----SFGSRESNRSFSGACFNCGES 734

Query: 1591 GHRASECPN 1617
            GHRA++CPN
Sbjct: 735  GHRATDCPN 743


>ref|XP_004981197.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Setaria italica]
          Length = 759

 Score =  762 bits (1968), Expect = 0.0
 Identities = 402/567 (70%), Positives = 447/567 (78%), Gaps = 28/567 (4%)
 Frame = +1

Query: 1    AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 180
            +YN+Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEVQYLVLDEADQMLAVGFEEDVE I
Sbjct: 208  SYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVQYLVLDEADQMLAVGFEEDVETI 267

Query: 181  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 360
            LQ+LP +RQ+MLFSATMP WVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAI  TATS
Sbjct: 268  LQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTATS 327

Query: 361  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 540
            KRTILSDLITVYAKGGKTIVFT+TKRDADEVS+AL+NSIASEALHGDISQHQRERTL GF
Sbjct: 328  KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGF 387

Query: 541  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 720
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK G AILMFTS
Sbjct: 388  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKVGTAILMFTS 447

Query: 721  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 900
            SQ+RTVKSLERDVGC+FEF+SPPSM+EVLESSAE V+ATLRGVH +S Q+FL  A+RLT+
Sbjct: 448  SQKRTVKSLERDVGCKFEFISPPSMEEVLESSAEHVIATLRGVHPESTQFFLGAAERLTE 507

Query: 901  EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1080
            E G+          SGFSQPPSSRSLISHEQGWVTLQLTR+PG+ RG+FS RSVTGFLSD
Sbjct: 508  ELGSHALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTRDPGFGRGFFSPRSVTGFLSD 567

Query: 1081 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 1260
            V   AADEVGKI + ADE VQGAVFDLPEEIAK+LL  +LP GN++ KI+KLP LQDDGP
Sbjct: 568  VCSAAADEVGKIYLTADENVQGAVFDLPEEIAKDLLAMELPAGNTITKISKLPALQDDGP 627

Query: 1261 ATDFYGRFXXXXXXXXXXXXXXXXXXXXXXWGGRNYDSDDSYGRGGRIS--DDSYGWGGR 1434
              D YGRF                         R+     + GRGG  S  +D +  GGR
Sbjct: 628  PADSYGRFSNDRGSK----------------NRRSRGGGSARGRGGWDSEGEDRFRRGGR 671

Query: 1435 ASRTDSSWSRNTKPRRD--SEDDWLIGGRRSSRTPSFGNR-------------------- 1548
            + R+D+   R+ +   D  SEDDW  GGR+S+R+ SFG+R                    
Sbjct: 672  SFRSDNDSGRSFRSDNDSWSEDDWSGGGRKSNRSSSFGSRSSSYSSRGSPSFGGRSSSFG 731

Query: 1549 ----ERGFAGACFNCGRSGHRASECPN 1617
                 R F+GACFNCG SGHRAS+CPN
Sbjct: 732  ARDSNRNFSGACFNCGESGHRASDCPN 758


>ref|XP_006355275.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Solanum tuberosum]
          Length = 744

 Score =  762 bits (1967), Expect = 0.0
 Identities = 394/542 (72%), Positives = 446/542 (82%), Gaps = 1/542 (0%)
 Frame = +1

Query: 1    AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 180
            +Y  Q+N+LSRGVDVVVGTPGR+IDLIN+++L+LGEV+YLVLDEADQMLAVGFEEDVEVI
Sbjct: 219  SYATQQNALSRGVDVVVGTPGRLIDLINNNTLKLGEVEYLVLDEADQMLAVGFEEDVEVI 278

Query: 181  LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 360
            L+KLPPQRQ+MLFSATMPGWVKKLSR+YLNNPLTIDLVGDQDEKLAEGIKLYA+S T+TS
Sbjct: 279  LEKLPPQRQSMLFSATMPGWVKKLSRKYLNNPLTIDLVGDQDEKLAEGIKLYALSATSTS 338

Query: 361  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 540
            KR+IL DL+TVYAKGGKTIVFTQTKRDADEVSMALSNSI+SEALHGDISQHQRERTL GF
Sbjct: 339  KRSILGDLVTVYAKGGKTIVFTQTKRDADEVSMALSNSISSEALHGDISQHQRERTLNGF 398

Query: 541  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 720
            RQGKFTVLVATDVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRTGRAGKEG AILM+T 
Sbjct: 399  RQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGIAILMYTG 458

Query: 721  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 900
            SQRRTV+SLERDVGC+FEFVSPPS++EVLESSAE VVA L GVH +S++YF+PTAQ+L +
Sbjct: 459  SQRRTVRSLERDVGCKFEFVSPPSVKEVLESSAEHVVAALTGVHPESVEYFIPTAQQLME 518

Query: 901  EQGTXXXXXXXXXXSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 1080
            +QG            GFS+PPSSRSLI+HEQGW TLQLTR+   SRG+ SARSVTGFLSD
Sbjct: 519  QQGVNSLAAALALLGGFSKPPSSRSLITHEQGWTTLQLTRDSENSRGFLSARSVTGFLSD 578

Query: 1081 VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 1260
            VY  AADE+GKI +IADE+VQGA+FDLPEEIA +LL ++LPPGN++ KITKLP LQDDGP
Sbjct: 579  VYSPAADEIGKIHLIADERVQGAIFDLPEEIAADLLNQELPPGNTISKITKLPALQDDGP 638

Query: 1261 ATDFYGRFXXXXXXXXXXXXXXXXXXXXXXWGGRNYDSDDSYGRGGRISDDSYGWGGRAS 1440
            A DFYGRF                        GR Y    S GR     DD++G      
Sbjct: 639  AGDFYGRFSSRDTRGTRGGFRDRR--------GR-YSQGSSSGRFSDNDDDNWG------ 683

Query: 1441 RTDSSWSRNTKPRRDSEDDWLIGG-RRSSRTPSFGNRERGFAGACFNCGRSGHRASECPN 1617
              + S SR  + RR    DWLI G RRSSR+ S G+R+R F GACFNCGRSGHRASECPN
Sbjct: 684  --NDSRSRGGRTRRGG-SDWLISGDRRSSRSLSGGSRDRSFGGACFNCGRSGHRASECPN 740

Query: 1618 NK 1623
             +
Sbjct: 741  KR 742