BLASTX nr result
ID: Zingiber23_contig00001635
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00001635
(558 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006838860.1| hypothetical protein AMTR_s00002p00266120 [A... 94 3e-17
gb|AEI83508.1| chloroplast photosystem II reaction center W-like... 91 1e-16
gb|ADB85767.1| chloroplast photosystem II reaction center W-like... 91 1e-16
gb|AEJ88280.1| putative chloroplast photosystem II reaction cent... 89 9e-16
ref|XP_002307627.1| hypothetical protein POPTR_0005s24030g [Popu... 89 9e-16
dbj|BAJ92812.1| predicted protein [Hordeum vulgare subsp. vulgar... 87 2e-15
ref|XP_002300801.2| hypothetical protein POPTR_0002s04520g [Popu... 86 8e-15
ref|XP_006443912.1| hypothetical protein CICLE_v10024455mg [Citr... 85 1e-14
ref|XP_006417879.1| hypothetical protein EUTSA_v10009104mg [Eutr... 85 1e-14
gb|ACG31447.1| photosystem II reaction center W protein [Zea mays] 85 1e-14
ref|XP_002458578.1| hypothetical protein SORBIDRAFT_03g036090 [S... 84 2e-14
ref|NP_001235636.1| uncharacterized protein LOC100306223 [Glycin... 84 3e-14
ref|XP_004961567.1| PREDICTED: photosystem II reaction center W ... 83 5e-14
gb|ACF85777.1| unknown [Zea mays] gi|194708378|gb|ACF88273.1| un... 83 5e-14
gb|EMS64749.1| Photosystem II reaction center W protein, chlorop... 82 7e-14
dbj|BAK02834.1| predicted protein [Hordeum vulgare subsp. vulgare] 82 7e-14
ref|XP_002440047.1| hypothetical protein SORBIDRAFT_09g025010 [S... 82 7e-14
ref|XP_002264508.1| PREDICTED: photosystem II reaction center W ... 82 7e-14
ref|XP_006383688.1| hypothetical protein POPTR_0005s24030g [Popu... 82 9e-14
ref|XP_003569933.1| PREDICTED: photosystem II reaction center W ... 82 9e-14
>ref|XP_006838860.1| hypothetical protein AMTR_s00002p00266120 [Amborella trichopoda]
gi|548841366|gb|ERN01429.1| hypothetical protein
AMTR_s00002p00266120 [Amborella trichopoda]
Length = 128
Score = 93.6 bits (231), Expect = 3e-17
Identities = 52/83 (62%), Positives = 55/83 (66%)
Frame = -3
Query: 538 GLPRLACKGRTVRCSTHEEKXXXXXXXXXXXXXXXXXTSPALALVDERMSTEGTGLSLGI 359
GLP LA KG VRCS + +SPALALVDER+STEGTGLSLGI
Sbjct: 33 GLPTLAKKGG-VRCSLEAKPSTNPCVGAALVASVATISSPALALVDERLSTEGTGLSLGI 91
Query: 358 SNNLLAWILLAVFGLIWALYFAY 290
SNNLLAWIL VFGLIWALYF Y
Sbjct: 92 SNNLLAWILFGVFGLIWALYFIY 114
>gb|AEI83508.1| chloroplast photosystem II reaction center W-like protein [Wolffia
arrhiza]
Length = 127
Score = 91.3 bits (225), Expect = 1e-16
Identities = 50/92 (54%), Positives = 56/92 (60%), Gaps = 6/92 (6%)
Frame = -3
Query: 547 RTAGLPRL------ACKGRTVRCSTHEEKXXXXXXXXXXXXXXXXXTSPALALVDERMST 386
R++ LP L +G V+CS EEK +SP LALVDER+ST
Sbjct: 22 RSSSLPLLPLPRRGGARGMQVKCSAAEEKKAPAVASLLAAASVMATSSPGLALVDERLST 81
Query: 385 EGTGLSLGISNNLLAWILLAVFGLIWALYFAY 290
EGTGLSLGISNNLL WIL VFGLIWALYF Y
Sbjct: 82 EGTGLSLGISNNLLIWILAGVFGLIWALYFVY 113
>gb|ADB85767.1| chloroplast photosystem II reaction center W-like protein [Wolffia
arrhiza]
Length = 127
Score = 91.3 bits (225), Expect = 1e-16
Identities = 50/92 (54%), Positives = 57/92 (61%), Gaps = 6/92 (6%)
Frame = -3
Query: 547 RTAGLPRL------ACKGRTVRCSTHEEKXXXXXXXXXXXXXXXXXTSPALALVDERMST 386
R++ LP L +G V+CS EE+ +SPALALVDER+ST
Sbjct: 22 RSSSLPLLPLPRRGGARGMQVKCSATEEEKAPAVASLLAAASVMATSSPALALVDERLST 81
Query: 385 EGTGLSLGISNNLLAWILLAVFGLIWALYFAY 290
EGTGLSLGISNNLL WIL VFGLIWALYF Y
Sbjct: 82 EGTGLSLGISNNLLIWILAGVFGLIWALYFVY 113
>gb|AEJ88280.1| putative chloroplast photosystem II reaction center W-like protein
[Wolffia australiana] gi|374096161|gb|AEY84993.1|
photosystem II reaction center W protein (chloroplast)
[Wolffia australiana]
Length = 132
Score = 88.6 bits (218), Expect = 9e-16
Identities = 50/85 (58%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Frame = -3
Query: 538 GLPRLA-CKGRTVRCSTH-EEKXXXXXXXXXXXXXXXXXTSPALALVDERMSTEGTGLSL 365
GLPR + V+CS EEK ++PALALVDER+STEGTGLSL
Sbjct: 34 GLPRRGGARAMQVKCSAAAEEKKVPAVASLLAAASVMATSNPALALVDERLSTEGTGLSL 93
Query: 364 GISNNLLAWILLAVFGLIWALYFAY 290
GISNNLLAWIL VFGLIWALYF Y
Sbjct: 94 GISNNLLAWILAGVFGLIWALYFVY 118
>ref|XP_002307627.1| hypothetical protein POPTR_0005s24030g [Populus trichocarpa]
gi|118486017|gb|ABK94852.1| unknown [Populus
trichocarpa] gi|222857076|gb|EEE94623.1| hypothetical
protein POPTR_0005s24030g [Populus trichocarpa]
Length = 134
Score = 88.6 bits (218), Expect = 9e-16
Identities = 52/92 (56%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Frame = -3
Query: 550 SRTAGLPRLACKGRTVRCSTH-----EEKXXXXXXXXXXXXXXXXXTSPALALVDERMST 386
S GLP +A KGR V CS EEK +SPALALVDERMST
Sbjct: 30 SPVLGLPAMAKKGR-VSCSMEGKPSVEEKCKGMSASLMAAVCAASMSSPALALVDERMST 88
Query: 385 EGTGLSLGISNNLLAWILLAVFGLIWALYFAY 290
EGTGL G+SNNLL WILL VF LIWALYF Y
Sbjct: 89 EGTGLPFGLSNNLLVWILLGVFALIWALYFTY 120
>dbj|BAJ92812.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326521836|dbj|BAK00494.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 128
Score = 87.4 bits (215), Expect = 2e-15
Identities = 48/89 (53%), Positives = 54/89 (60%), Gaps = 6/89 (6%)
Frame = -3
Query: 538 GLPRLACKGRTVRCSTHEEKXXXXXXXXXXXXXXXXXTS------PALALVDERMSTEGT 377
GLP+L +G VRCS +E + PALALVDERMSTEGT
Sbjct: 25 GLPQLRTRGERVRCSYSKEATPAAAARGAGASLLAAAGAVTASAGPALALVDERMSTEGT 84
Query: 376 GLSLGISNNLLAWILLAVFGLIWALYFAY 290
GLSLG+SNNLL WILL VFGLIW+LY Y
Sbjct: 85 GLSLGLSNNLLGWILLGVFGLIWSLYTVY 113
>ref|XP_002300801.2| hypothetical protein POPTR_0002s04520g [Populus trichocarpa]
gi|118489315|gb|ABK96462.1| unknown [Populus trichocarpa
x Populus deltoides] gi|550344272|gb|EEE80074.2|
hypothetical protein POPTR_0002s04520g [Populus
trichocarpa]
Length = 133
Score = 85.5 bits (210), Expect = 8e-15
Identities = 49/92 (53%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Frame = -3
Query: 550 SRTAGLPRLACKGRTVRCS-----THEEKXXXXXXXXXXXXXXXXXTSPALALVDERMST 386
S GLP +A KG+ V CS T EEK +SPALALVDER+ST
Sbjct: 29 SHVLGLPAIAKKGK-VSCSMEGKPTVEEKSKGMSASLMAAVCAATISSPALALVDERLST 87
Query: 385 EGTGLSLGISNNLLAWILLAVFGLIWALYFAY 290
EGTGL G+SNNLL WILL VF IW+LYF Y
Sbjct: 88 EGTGLPFGLSNNLLVWILLGVFAFIWSLYFVY 119
>ref|XP_006443912.1| hypothetical protein CICLE_v10024455mg [Citrus clementina]
gi|568851829|ref|XP_006479589.1| PREDICTED: photosystem
II reaction center W protein, chloroplastic-like [Citrus
sinensis] gi|557546174|gb|ESR57152.1| hypothetical
protein CICLE_v10024455mg [Citrus clementina]
Length = 135
Score = 84.7 bits (208), Expect = 1e-14
Identities = 49/94 (52%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Frame = -3
Query: 550 SRTAGLPRLACKGRTVRCSTHEEKXXXXXXXXXXXXXXXXXT-------SPALALVDERM 392
S GLP +A KG+ VRCS E+ SPA+ALVDERM
Sbjct: 29 SPVLGLPAMAVKGK-VRCSMEEKPSKQESKTNVGMSASLLAAACAATMSSPAMALVDERM 87
Query: 391 STEGTGLSLGISNNLLAWILLAVFGLIWALYFAY 290
STEGTGL G+SNNLL WILL VFGLIWALY Y
Sbjct: 88 STEGTGLPFGLSNNLLGWILLGVFGLIWALYIPY 121
>ref|XP_006417879.1| hypothetical protein EUTSA_v10009104mg [Eutrema salsugineum]
gi|557095650|gb|ESQ36232.1| hypothetical protein
EUTSA_v10009104mg [Eutrema salsugineum]
Length = 128
Score = 84.7 bits (208), Expect = 1e-14
Identities = 44/86 (51%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Frame = -3
Query: 538 GLPRLACKGRTVRCSTH---EEKXXXXXXXXXXXXXXXXXTSPALALVDERMSTEGTGLS 368
G+PR++ + V+CS E+ +SPA+ALVDERMSTEGTGL
Sbjct: 29 GVPRMSKRSSGVKCSMETKQEKSSTAGASAVAAMLTAVMSSSPAMALVDERMSTEGTGLP 88
Query: 367 LGISNNLLAWILLAVFGLIWALYFAY 290
G+SNNLL WIL VFGLIWALYF Y
Sbjct: 89 FGLSNNLLGWILFGVFGLIWALYFTY 114
>gb|ACG31447.1| photosystem II reaction center W protein [Zea mays]
Length = 131
Score = 84.7 bits (208), Expect = 1e-14
Identities = 48/93 (51%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Frame = -3
Query: 553 LSRTAGLPRLACKGRTVRCSTHEEKXXXXXXXXXXXXXXXXXT-----SPALALVDERMS 389
L AGLP L + VRCS ++ PALALVDERMS
Sbjct: 24 LGTYAGLPALRARSERVRCSYAKDAAPVSTKGAGASLLAAAGAVTASAGPALALVDERMS 83
Query: 388 TEGTGLSLGISNNLLAWILLAVFGLIWALYFAY 290
TEGTGLSLG+SNNLL WILL VFGLIW+LY Y
Sbjct: 84 TEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIY 116
>ref|XP_002458578.1| hypothetical protein SORBIDRAFT_03g036090 [Sorghum bicolor]
gi|241930553|gb|EES03698.1| hypothetical protein
SORBIDRAFT_03g036090 [Sorghum bicolor]
Length = 126
Score = 84.0 bits (206), Expect = 2e-14
Identities = 46/88 (52%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Frame = -3
Query: 538 GLPRLACKGRTVRCSTHEEKXXXXXXXXXXXXXXXXXT-----SPALALVDERMSTEGTG 374
GLP+L + VRCS ++ PALALVDERMSTEGTG
Sbjct: 25 GLPQLRARSERVRCSYAKDAAAVSAKAAGASLLAAAGAVTASAGPALALVDERMSTEGTG 84
Query: 373 LSLGISNNLLAWILLAVFGLIWALYFAY 290
LSLG+SNNLL WILL VFGLIW+LY Y
Sbjct: 85 LSLGLSNNLLGWILLGVFGLIWSLYTVY 112
>ref|NP_001235636.1| uncharacterized protein LOC100306223 [Glycine max]
gi|255627917|gb|ACU14303.1| unknown [Glycine max]
Length = 132
Score = 83.6 bits (205), Expect = 3e-14
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Frame = -3
Query: 550 SRTAGLPRLACKGRTVRCSTHEE----KXXXXXXXXXXXXXXXXXTSPALALVDERMSTE 383
S GLP +A G+ VRCS E+ +SPA+ALVDER+STE
Sbjct: 29 STVLGLPAMAKAGK-VRCSMEEKPSSSSNIGMGASLLAAAVAATMSSPAMALVDERLSTE 87
Query: 382 GTGLSLGISNNLLAWILLAVFGLIWALYFAY 290
GTGL G+SNNLL WIL VFGLIWALYF Y
Sbjct: 88 GTGLPFGLSNNLLGWILFGVFGLIWALYFVY 118
>ref|XP_004961567.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Setaria italica]
Length = 204
Score = 82.8 bits (203), Expect = 5e-14
Identities = 47/93 (50%), Positives = 52/93 (55%), Gaps = 10/93 (10%)
Frame = -3
Query: 538 GLPRLACKGRTVRCSTHEEKXXXXXXXXXXXXXXXXXT----------SPALALVDERMS 389
GLP+L + VRCS + SPALALVDERMS
Sbjct: 97 GLPQLRARADKVRCSACSRQQDGSGKGAAAPAAGASSLLAVASAMTTSSPALALVDERMS 156
Query: 388 TEGTGLSLGISNNLLAWILLAVFGLIWALYFAY 290
TEGTGLSLG+SNNLL WILL VFGLIW+LY Y
Sbjct: 157 TEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVY 189
>gb|ACF85777.1| unknown [Zea mays] gi|194708378|gb|ACF88273.1| unknown [Zea mays]
gi|195617568|gb|ACG30614.1| photosystem II reaction
center W protein [Zea mays] gi|414880272|tpg|DAA57403.1|
TPA: hypothetical protein ZEAMMB73_527010 [Zea mays]
Length = 127
Score = 82.8 bits (203), Expect = 5e-14
Identities = 46/88 (52%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Frame = -3
Query: 538 GLPRLACKGRTVRCSTHEEKXXXXXXXXXXXXXXXXXT-----SPALALVDERMSTEGTG 374
GLP L + VRCS ++ PALALVDERMSTEGTG
Sbjct: 25 GLPALRARSERVRCSYAKDAAPVSTKGAGASLLAAAGAVTASAGPALALVDERMSTEGTG 84
Query: 373 LSLGISNNLLAWILLAVFGLIWALYFAY 290
LSLG+SNNLL WILL VFGLIW+LY Y
Sbjct: 85 LSLGLSNNLLGWILLGVFGLIWSLYTIY 112
>gb|EMS64749.1| Photosystem II reaction center W protein, chloroplastic [Triticum
urartu]
Length = 154
Score = 82.4 bits (202), Expect = 7e-14
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = -3
Query: 424 SPALALVDERMSTEGTGLSLGISNNLLAWILLAVFGLIWALYFAY 290
SPALALVDERMSTEGTGLSLG+SNNLL WILL VFGLIW+LY Y
Sbjct: 95 SPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVY 139
>dbj|BAK02834.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 98
Score = 82.4 bits (202), Expect = 7e-14
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = -3
Query: 424 SPALALVDERMSTEGTGLSLGISNNLLAWILLAVFGLIWALYFAY 290
SPALALVDERMSTEGTGLSLG+SNNLL WILL VFGLIW+LY Y
Sbjct: 39 SPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVY 83
>ref|XP_002440047.1| hypothetical protein SORBIDRAFT_09g025010 [Sorghum bicolor]
gi|241945332|gb|EES18477.1| hypothetical protein
SORBIDRAFT_09g025010 [Sorghum bicolor]
Length = 63
Score = 82.4 bits (202), Expect = 7e-14
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = -3
Query: 424 SPALALVDERMSTEGTGLSLGISNNLLAWILLAVFGLIWALYFAY 290
SPALALVDERMSTEGTGLSLG+SNNLL WILL VFGLIW+LY Y
Sbjct: 5 SPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVY 49
>ref|XP_002264508.1| PREDICTED: photosystem II reaction center W protein, chloroplastic
[Vitis vinifera] gi|296087925|emb|CBI35208.3| unnamed
protein product [Vitis vinifera]
Length = 135
Score = 82.4 bits (202), Expect = 7e-14
Identities = 47/95 (49%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Frame = -3
Query: 550 SRTAGLPRLACKGRTVRCSTHEEKXXXXXXXXXXXXXXXXXTS--------PALALVDER 395
S GLP +A KGR VRC + E+ + PA+ALVDER
Sbjct: 28 SPVLGLPAMAKKGR-VRCMSEEKPCGSDMGSSISMGASLMAAAAAVAASAGPAMALVDER 86
Query: 394 MSTEGTGLSLGISNNLLAWILLAVFGLIWALYFAY 290
+STEGTGL G+SNNLL WIL VFGLIWALYF Y
Sbjct: 87 LSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFTY 121
>ref|XP_006383688.1| hypothetical protein POPTR_0005s24030g [Populus trichocarpa]
gi|550339640|gb|ERP61485.1| hypothetical protein
POPTR_0005s24030g [Populus trichocarpa]
Length = 131
Score = 82.0 bits (201), Expect = 9e-14
Identities = 48/84 (57%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Frame = -3
Query: 526 LACKGRTVRCSTH-----EEKXXXXXXXXXXXXXXXXXTSPALALVDERMSTEGTGLSLG 362
+A KGR V CS EEK +SPALALVDERMSTEGTGL G
Sbjct: 35 MAKKGR-VSCSMEGKPSVEEKCKGMSASLMAAVCAASMSSPALALVDERMSTEGTGLPFG 93
Query: 361 ISNNLLAWILLAVFGLIWALYFAY 290
+SNNLL WILL VF LIWALYF Y
Sbjct: 94 LSNNLLVWILLGVFALIWALYFTY 117
>ref|XP_003569933.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Brachypodium distachyon]
Length = 131
Score = 82.0 bits (201), Expect = 9e-14
Identities = 45/92 (48%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Frame = -3
Query: 538 GLPRLACKGRTVRCSTHEEK---------XXXXXXXXXXXXXXXXXTSPALALVDERMST 386
GLP+L + VRCS ++ +PALALVD+RMST
Sbjct: 25 GLPQLRARSERVRCSYSKDAKEATPTTSVRGAGASLLAAAGAVTASAAPALALVDDRMST 84
Query: 385 EGTGLSLGISNNLLAWILLAVFGLIWALYFAY 290
EGTGLSLG+SNNLL WILL VFGLIW+LY Y
Sbjct: 85 EGTGLSLGLSNNLLGWILLGVFGLIWSLYTVY 116