BLASTX nr result
ID: Zingiber23_contig00001620
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Zingiber23_contig00001620 (632 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002531346.1| structural constituent of ribosome, putative... 91 4e-16 ref|XP_006848174.1| hypothetical protein AMTR_s00029p00235620 [A... 90 5e-16 ref|XP_002274396.2| PREDICTED: 30S ribosomal protein S31, chloro... 89 1e-15 emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis vinifera] 88 2e-15 gb|EOY07263.1| Plastid-specific ribosomal protein 4 [Theobroma c... 82 1e-13 gb|AFK38352.1| unknown [Lotus japonicus] 82 1e-13 gb|ESW24913.1| hypothetical protein PHAVU_004G171400g [Phaseolus... 81 2e-13 ref|XP_003516947.1| PREDICTED: 30S ribosomal protein S31, chloro... 81 3e-13 gb|EXC23677.1| hypothetical protein L484_015587 [Morus notabilis] 80 5e-13 ref|XP_006296531.1| hypothetical protein CARUB_v10025723mg [Caps... 80 5e-13 ref|NP_181349.1| plastid-specific ribosomal protein 4 [Arabidop... 80 5e-13 ref|XP_004302672.1| PREDICTED: 30S ribosomal protein S31, chloro... 79 8e-13 ref|XP_006355664.1| PREDICTED: 30S ribosomal protein S31, chloro... 79 1e-12 ref|XP_006480988.1| PREDICTED: 30S ribosomal protein S31, chloro... 79 1e-12 ref|XP_006429326.1| hypothetical protein CICLE_v10013049mg [Citr... 79 1e-12 ref|NP_001148387.1| LOC100282000 [Zea mays] gi|195618868|gb|ACG3... 79 1e-12 gb|ESW05912.1| hypothetical protein PHAVU_010G003200g [Phaseolus... 78 2e-12 gb|AGS43132.1| hypothetical protein, partial [Zea mays] 78 2e-12 ref|XP_002456803.1| hypothetical protein SORBIDRAFT_03g043130 [S... 78 2e-12 gb|EMT04999.1| hypothetical protein F775_30618 [Aegilops tauschii] 77 3e-12 >ref|XP_002531346.1| structural constituent of ribosome, putative [Ricinus communis] gi|223529044|gb|EEF31030.1| structural constituent of ribosome, putative [Ricinus communis] Length = 116 Score = 90.5 bits (223), Expect = 4e-16 Identities = 52/115 (45%), Positives = 65/115 (56%), Gaps = 4/115 (3%) Frame = -3 Query: 537 MGTAPMAVAAP----RLSFSRAEXXXXXXXXXXXSPHWNSTAFTAALPPPLYICCGRGDK 370 M + MA A P RLS S++E P + + TA+ P ++ CGRGDK Sbjct: 1 MASLMMATALPMTPHRLSSSQSEALGVGISFSYSIPSLSVSTTTASTSPIPFVYCGRGDK 60 Query: 369 KTARGKRFKHSFGNARPRNKSKGRGXXXXXXXXXXXXXXXXXDGEIVRIEIDESL 205 KTA+GKRF HSFGNARPRNK+KGRG DGE+V+I+IDESL Sbjct: 61 KTAKGKRFNHSFGNARPRNKNKGRGPPRIPVPSSPPTNDIFEDGEVVKIDIDESL 115 >ref|XP_006848174.1| hypothetical protein AMTR_s00029p00235620 [Amborella trichopoda] gi|548851479|gb|ERN09755.1| hypothetical protein AMTR_s00029p00235620 [Amborella trichopoda] Length = 120 Score = 90.1 bits (222), Expect = 5e-16 Identities = 50/119 (42%), Positives = 67/119 (56%), Gaps = 2/119 (1%) Frame = -3 Query: 549 LGMAMGTAPMAVAAPRLSFSRAEXXXXXXXXXXXSPHWNSTAFTAALPPPLY--ICCGRG 376 + + +G APM + P LS + + +S++ + A PLY + CGRG Sbjct: 1 MALTLGAAPMVLNFPSLSSRASLSFKPNFGFSLSNVSPSSSSLSMASTAPLYPSVFCGRG 60 Query: 375 DKKTARGKRFKHSFGNARPRNKSKGRGXXXXXXXXXXXXXXXXXDGEIVRIEIDESLFS 199 D+KTA+GKRF HSFGNARPRNK KGRG DGE+V+I+IDES+FS Sbjct: 61 DRKTAKGKRFSHSFGNARPRNKKKGRGPPRVPAPPLPPKKDRFDDGEVVKIQIDESIFS 119 >ref|XP_002274396.2| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Vitis vinifera] gi|297740225|emb|CBI30407.3| unnamed protein product [Vitis vinifera] Length = 118 Score = 89.0 bits (219), Expect = 1e-15 Identities = 57/124 (45%), Positives = 71/124 (57%), Gaps = 2/124 (1%) Frame = -3 Query: 564 MALLSLGMAMGTAPMAV-AAPRLSFSRAEXXXXXXXXXXXSPHWNSTAFTAALPPPL-YI 391 MA L LG A AP ++ + R SFS++E + S + +A PPP+ + Sbjct: 1 MAALILG-APAIAPQSLNLSSRFSFSQSETLAVSFDT-----RFVSLSISATSPPPIPSV 54 Query: 390 CCGRGDKKTARGKRFKHSFGNARPRNKSKGRGXXXXXXXXXXXXXXXXXDGEIVRIEIDE 211 CGRGDKKTA+GKRF HSFGNARPRNK KGRG D E+V+IEIDE Sbjct: 55 YCGRGDKKTAKGKRFNHSFGNARPRNKKKGRGPPRAPIPPSPPKKDRFEDDEVVKIEIDE 114 Query: 210 SLFS 199 SLF+ Sbjct: 115 SLFN 118 >emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis vinifera] Length = 117 Score = 87.8 bits (216), Expect = 2e-15 Identities = 56/123 (45%), Positives = 69/123 (56%), Gaps = 1/123 (0%) Frame = -3 Query: 564 MALLSLGMAMGTAPMAV-AAPRLSFSRAEXXXXXXXXXXXSPHWNSTAFTAALPPPLYIC 388 MA L LG A AP ++ + R SFS++E + S + +A PP + Sbjct: 1 MAALILG-APAIAPQSLNLSSRFSFSQSETLAVSFDT-----RFVSLSISATSPPIPSVY 54 Query: 387 CGRGDKKTARGKRFKHSFGNARPRNKSKGRGXXXXXXXXXXXXXXXXXDGEIVRIEIDES 208 CGRGDKKTA+GKRF HSFGNARPRNK KGRG D E+V+IEIDES Sbjct: 55 CGRGDKKTAKGKRFNHSFGNARPRNKKKGRGPPRAPIPPSPPKKDRFEDDEVVKIEIDES 114 Query: 207 LFS 199 LF+ Sbjct: 115 LFN 117 >gb|EOY07263.1| Plastid-specific ribosomal protein 4 [Theobroma cacao] Length = 121 Score = 82.0 bits (201), Expect = 1e-13 Identities = 50/117 (42%), Positives = 62/117 (52%), Gaps = 2/117 (1%) Frame = -3 Query: 543 MAMGTAPMAVAAPRLS-FSRAEXXXXXXXXXXXSPHWNSTAFTAALPPPL-YICCGRGDK 370 + +G AP+ + LS SR S +S + + A P + Y+ CGRGDK Sbjct: 4 LLLGAAPVPAQSVNLSSLSRISSSHSQTLGTSLSVSTSSVSLSTASSPSIPYVYCGRGDK 63 Query: 369 KTARGKRFKHSFGNARPRNKSKGRGXXXXXXXXXXXXXXXXXDGEIVRIEIDESLFS 199 KT +GKRF HSFGNARPRNK KGRG D E ++IEIDESLFS Sbjct: 64 KTKKGKRFNHSFGNARPRNKKKGRGPPRVPIPPSPPRKDKFDDDEKIKIEIDESLFS 120 >gb|AFK38352.1| unknown [Lotus japonicus] Length = 121 Score = 82.0 bits (201), Expect = 1e-13 Identities = 51/130 (39%), Positives = 70/130 (53%) Frame = -3 Query: 588 VHSWPPVPMALLSLGMAMGTAPMAVAAPRLSFSRAEXXXXXXXXXXXSPHWNSTAFTAAL 409 + S PP+P+ L S ++ LSFS+++ S ST+ T+++ Sbjct: 6 LQSLPPLPIQLQS------------SSSHLSFSQSQTFSSPLCTSFTSL---STSATSSI 50 Query: 408 PPPLYICCGRGDKKTARGKRFKHSFGNARPRNKSKGRGXXXXXXXXXXXXXXXXXDGEIV 229 P + CGRGD+KT RGKRF HSFGNARP++K KGRG D E+V Sbjct: 51 SPTPSVYCGRGDRKTERGKRFNHSFGNARPKDKKKGRGPPRLYAPPAPTKKDKFEDNEVV 110 Query: 228 RIEIDESLFS 199 +I+IDESLFS Sbjct: 111 KIDIDESLFS 120 >gb|ESW24913.1| hypothetical protein PHAVU_004G171400g [Phaseolus vulgaris] Length = 121 Score = 81.3 bits (199), Expect = 2e-13 Identities = 41/78 (52%), Positives = 50/78 (64%) Frame = -3 Query: 432 STAFTAALPPPLYICCGRGDKKTARGKRFKHSFGNARPRNKSKGRGXXXXXXXXXXXXXX 253 S + T+ L P + CGRGD+KTA+GKRF HSFGNARP++K KGRG Sbjct: 43 SASATSTLSPTPSVYCGRGDRKTAKGKRFAHSFGNARPKDKKKGRGPPRIYAPPAPSKRD 102 Query: 252 XXXDGEIVRIEIDESLFS 199 D E+V+IEIDESLFS Sbjct: 103 RFEDNEVVKIEIDESLFS 120 >ref|XP_003516947.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Glycine max] Length = 121 Score = 80.9 bits (198), Expect = 3e-13 Identities = 41/78 (52%), Positives = 49/78 (62%) Frame = -3 Query: 432 STAFTAALPPPLYICCGRGDKKTARGKRFKHSFGNARPRNKSKGRGXXXXXXXXXXXXXX 253 S + T L P + CGRGD+KTA+GKRF HSFGNARP++K KGRG Sbjct: 43 SASATTTLSPTPSVYCGRGDRKTAKGKRFAHSFGNARPKDKKKGRGPLRPYAPPAPSKKD 102 Query: 252 XXXDGEIVRIEIDESLFS 199 D E+V+IEIDESLFS Sbjct: 103 RLEDNEVVKIEIDESLFS 120 >gb|EXC23677.1| hypothetical protein L484_015587 [Morus notabilis] Length = 122 Score = 80.1 bits (196), Expect = 5e-13 Identities = 51/124 (41%), Positives = 65/124 (52%), Gaps = 2/124 (1%) Frame = -3 Query: 564 MALLSLGMAMGTAPMAVAAPRLSFSRAEXXXXXXXXXXXSPHWNSTAFTAALPPPLY--I 391 MA L LG + A R+SFS+++ S ++S + T+ PP + + Sbjct: 1 MASLLLGSLPIPSQSLPLASRISFSQSQTLATSLPSFALSSSFSSISATS---PPSFPSV 57 Query: 390 CCGRGDKKTARGKRFKHSFGNARPRNKSKGRGXXXXXXXXXXXXXXXXXDGEIVRIEIDE 211 CGRGDKKT RGKRF HS+GNARPRNK KGRG ++IEIDE Sbjct: 58 YCGRGDKKTERGKRFNHSYGNARPRNKKKGRGPPRVPVPPSPPRKDKFDSDAKIKIEIDE 117 Query: 210 SLFS 199 SLFS Sbjct: 118 SLFS 121 >ref|XP_006296531.1| hypothetical protein CARUB_v10025723mg [Capsella rubella] gi|482565239|gb|EOA29429.1| hypothetical protein CARUB_v10025723mg [Capsella rubella] Length = 118 Score = 80.1 bits (196), Expect = 5e-13 Identities = 51/122 (41%), Positives = 71/122 (58%) Frame = -3 Query: 564 MALLSLGMAMGTAPMAVAAPRLSFSRAEXXXXXXXXXXXSPHWNSTAFTAALPPPLYICC 385 MA L LG A +A+++ RLS S++E ++ +A +++ P +Y C Sbjct: 1 MASLILG-APPRVTVAISSSRLSSSQSETAGVSLSCFTQ--QFSLSASSSSSIPLVY--C 55 Query: 384 GRGDKKTARGKRFKHSFGNARPRNKSKGRGXXXXXXXXXXXXXXXXXDGEIVRIEIDESL 205 GRGD+KTA+GKRF HSFGNARPRNK+KGRG + E ++I+IDESL Sbjct: 56 GRGDRKTAKGKRFNHSFGNARPRNKNKGRGPERVPVPPAPPRKDKFENDEKIKIDIDESL 115 Query: 204 FS 199 FS Sbjct: 116 FS 117 >ref|NP_181349.1| plastid-specific ribosomal protein 4 [Arabidopsis thaliana] gi|75275034|sp|O80439.1|RR31_ARATH RecName: Full=30S ribosomal protein S31, chloroplastic; AltName: Full=Plastid-specific 30S ribosomal protein 4; Short=PSRP-4; Flags: Precursor gi|7578852|gb|AAF64153.1|AF236826_1 plastid-specific ribosomal protein 4 precursor [Arabidopsis thaliana] gi|3335362|gb|AAC27163.1| 30S ribosomal protein S31 [Arabidopsis thaliana] gi|15529182|gb|AAK97685.1| At2g38140/F16M14.7 [Arabidopsis thaliana] gi|16974357|gb|AAL31104.1| At2g38140/F16M14.7 [Arabidopsis thaliana] gi|21618289|gb|AAM67339.1| 30S ribosomal protein S31 [Arabidopsis thaliana] gi|330254400|gb|AEC09494.1| plastid-specific ribosomal protein 4 [Arabidopsis thaliana] Length = 118 Score = 80.1 bits (196), Expect = 5e-13 Identities = 53/122 (43%), Positives = 68/122 (55%) Frame = -3 Query: 564 MALLSLGMAMGTAPMAVAAPRLSFSRAEXXXXXXXXXXXSPHWNSTAFTAALPPPLYICC 385 MA L LG A +A+ + RLS S +E H S + +++ PL + C Sbjct: 1 MASLILG-APPRVTVALPSSRLSSSHSETAGVSLSCFT---HQFSLSTSSSSSIPL-VYC 55 Query: 384 GRGDKKTARGKRFKHSFGNARPRNKSKGRGXXXXXXXXXXXXXXXXXDGEIVRIEIDESL 205 GRGD+KTA+GKRF HSFGNARPRNKSKGRG + E ++I+IDESL Sbjct: 56 GRGDRKTAKGKRFNHSFGNARPRNKSKGRGPERVPVPPAPPRKDKFENDEKIKIDIDESL 115 Query: 204 FS 199 FS Sbjct: 116 FS 117 >ref|XP_004302672.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Fragaria vesca subsp. vesca] Length = 117 Score = 79.3 bits (194), Expect = 8e-13 Identities = 50/120 (41%), Positives = 60/120 (50%) Frame = -3 Query: 564 MALLSLGMAMGTAPMAVAAPRLSFSRAEXXXXXXXXXXXSPHWNSTAFTAALPPPLYICC 385 MA L LG + R+SFS++E P + + TA P + C Sbjct: 1 MASLVLGALPIPSQSLALNSRISFSQSETLAISLPS----PTASLSISTATTPSVPSVYC 56 Query: 384 GRGDKKTARGKRFKHSFGNARPRNKSKGRGXXXXXXXXXXXXXXXXXDGEIVRIEIDESL 205 GRGDKKT RGKRF HSFGNARPRNK KGRG D +V++EIDESL Sbjct: 57 GRGDKKTERGKRFNHSFGNARPRNKKKGRGSPRVPVPAAPPKKDKFEDDSVVKVEIDESL 116 >ref|XP_006355664.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Solanum tuberosum] Length = 121 Score = 79.0 bits (193), Expect = 1e-12 Identities = 50/119 (42%), Positives = 64/119 (53%), Gaps = 8/119 (6%) Frame = -3 Query: 543 MAMGTAPMAVA------APRLSFSRAEXXXXXXXXXXXSPHWN--STAFTAALPPPLYIC 388 + +G+ PMA +P LSFSR+ SP + S + T + P +Y Sbjct: 4 LLVGSVPMATVQSMASLSPNLSFSRSHSVAGSVSIAAASPSASISSLSLTDSNLPLIY-- 61 Query: 387 CGRGDKKTARGKRFKHSFGNARPRNKSKGRGXXXXXXXXXXXXXXXXXDGEIVRIEIDE 211 CGRGDKKTA+GKRF HSFGNARPRNK KGRG DG++V+IEI + Sbjct: 62 CGRGDKKTAKGKRFNHSFGNARPRNKKKGRGPPRVAAPPAAPKRDPFDDGQVVKIEIHD 120 >ref|XP_006480988.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Citrus sinensis] Length = 144 Score = 78.6 bits (192), Expect = 1e-12 Identities = 38/66 (57%), Positives = 44/66 (66%) Frame = -3 Query: 396 YICCGRGDKKTARGKRFKHSFGNARPRNKSKGRGXXXXXXXXXXXXXXXXXDGEIVRIEI 217 Y+ CGRGDKKTA+GKRF HSFGNARPR+K KGRG DGE + I++ Sbjct: 78 YVYCGRGDKKTAKGKRFNHSFGNARPRDKKKGRGPPRVTAPPAPPRKDRFDDGEKIHIDL 137 Query: 216 DESLFS 199 DESLFS Sbjct: 138 DESLFS 143 >ref|XP_006429326.1| hypothetical protein CICLE_v10013049mg [Citrus clementina] gi|557531383|gb|ESR42566.1| hypothetical protein CICLE_v10013049mg [Citrus clementina] Length = 144 Score = 78.6 bits (192), Expect = 1e-12 Identities = 38/66 (57%), Positives = 44/66 (66%) Frame = -3 Query: 396 YICCGRGDKKTARGKRFKHSFGNARPRNKSKGRGXXXXXXXXXXXXXXXXXDGEIVRIEI 217 Y+ CGRGDKKTA+GKRF HSFGNARPR+K KGRG DGE + I++ Sbjct: 78 YVYCGRGDKKTAKGKRFNHSFGNARPRDKKKGRGPPRVTAPPAPPRKDRFDDGEKIHIDL 137 Query: 216 DESLFS 199 DESLFS Sbjct: 138 DESLFS 143 >ref|NP_001148387.1| LOC100282000 [Zea mays] gi|195618868|gb|ACG31264.1| PSRP4 [Zea mays] Length = 130 Score = 78.6 bits (192), Expect = 1e-12 Identities = 52/128 (40%), Positives = 64/128 (50%), Gaps = 8/128 (6%) Frame = -3 Query: 564 MALLSL-GMAMGTAPMAVAAPR-------LSFSRAEXXXXXXXXXXXSPHWNSTAFTAAL 409 MALL++ GMAM TA A+ + +S S + T +A + Sbjct: 1 MALLAVQGMAMSTAAAALPSHNHGAVSSYVSTSSYALAASAAFPRARAAFAVGTVLSATV 60 Query: 408 PPPLYICCGRGDKKTARGKRFKHSFGNARPRNKSKGRGXXXXXXXXXXXXXXXXXDGEIV 229 P L + CGRGDKKT RGKRF HS+GNARPRNK KG G DGEI+ Sbjct: 61 TPVLDVYCGRGDKKTKRGKRFNHSYGNARPRNKKKGTGPARLFAPPAPPRKDQFDDGEII 120 Query: 228 RIEIDESL 205 IEIDE + Sbjct: 121 SIEIDEDI 128 >gb|ESW05912.1| hypothetical protein PHAVU_010G003200g [Phaseolus vulgaris] Length = 121 Score = 78.2 bits (191), Expect = 2e-12 Identities = 41/78 (52%), Positives = 49/78 (62%) Frame = -3 Query: 432 STAFTAALPPPLYICCGRGDKKTARGKRFKHSFGNARPRNKSKGRGXXXXXXXXXXXXXX 253 S +L P +Y CGRGD+KTA+GKRF HSFGNARP++K KGRG Sbjct: 45 SATSNLSLTPSVY--CGRGDRKTAKGKRFAHSFGNARPKDKKKGRGPPRIYAPPAPSKKN 102 Query: 252 XXXDGEIVRIEIDESLFS 199 D E+V+IEIDESLFS Sbjct: 103 RFEDNEVVKIEIDESLFS 120 >gb|AGS43132.1| hypothetical protein, partial [Zea mays] Length = 82 Score = 77.8 bits (190), Expect = 2e-12 Identities = 39/75 (52%), Positives = 45/75 (60%) Frame = -3 Query: 429 TAFTAALPPPLYICCGRGDKKTARGKRFKHSFGNARPRNKSKGRGXXXXXXXXXXXXXXX 250 T +A + P L + CGRGDKKT RGKRF HS+GNARPRNK KG G Sbjct: 6 TVLSATVTPVLDVYCGRGDKKTKRGKRFNHSYGNARPRNKKKGTGPARLFAPPAPPRKDQ 65 Query: 249 XXDGEIVRIEIDESL 205 DGEI+ IEIDE + Sbjct: 66 FDDGEIISIEIDEDI 80 >ref|XP_002456803.1| hypothetical protein SORBIDRAFT_03g043130 [Sorghum bicolor] gi|241928778|gb|EES01923.1| hypothetical protein SORBIDRAFT_03g043130 [Sorghum bicolor] Length = 130 Score = 77.8 bits (190), Expect = 2e-12 Identities = 52/128 (40%), Positives = 64/128 (50%), Gaps = 8/128 (6%) Frame = -3 Query: 564 MALLSL-GMAMGTAPMAVAAPR-------LSFSRAEXXXXXXXXXXXSPHWNSTAFTAAL 409 MALL++ GMAM TA A+ + +S S + +AA+ Sbjct: 1 MALLAIQGMAMSTAAAALPSHNHGAVSSCVSTSSYALTASAAFPRVRAAFAVGAVTSAAV 60 Query: 408 PPPLYICCGRGDKKTARGKRFKHSFGNARPRNKSKGRGXXXXXXXXXXXXXXXXXDGEIV 229 P L + CGRGDKKT RGKRF HS+GNARPRNK KG G DGEI+ Sbjct: 61 TPVLDVYCGRGDKKTKRGKRFNHSYGNARPRNKKKGTGPPRLFAPPAPPRKDQFDDGEII 120 Query: 228 RIEIDESL 205 IEIDE + Sbjct: 121 SIEIDEDI 128 >gb|EMT04999.1| hypothetical protein F775_30618 [Aegilops tauschii] Length = 126 Score = 77.4 bits (189), Expect = 3e-12 Identities = 53/127 (41%), Positives = 64/127 (50%), Gaps = 7/127 (5%) Frame = -3 Query: 564 MALLSL-GMAMGTAPM------AVAAPRLSFSRAEXXXXXXXXXXXSPHWNSTAFTAALP 406 MALL++ GMAM TA AVA+ S A +TA +A L Sbjct: 1 MALLAVQGMAMSTAAFPSHHHGAVASSSFGLSAAVSFSRSRTSLV------ATAVSAPLT 54 Query: 405 PPLYICCGRGDKKTARGKRFKHSFGNARPRNKSKGRGXXXXXXXXXXXXXXXXXDGEIVR 226 L + CGRGD+KT RGKRF HS+GNARPRNK KG G DGEI+ Sbjct: 55 SVLDVYCGRGDRKTKRGKRFSHSYGNARPRNKKKGTGPARLYAPPAPPRKDQFEDGEIIA 114 Query: 225 IEIDESL 205 IEID+ + Sbjct: 115 IEIDDDI 121