BLASTX nr result
ID: Zingiber23_contig00001603
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00001603
(404 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX98019.1| Glycine-rich RNA-binding protein 7 [Theobroma cacao] 90 3e-16
gb|ACJ11730.1| glycine-rich RNA-binding protein [Gossypium hirsu... 90 3e-16
pdb|4C7Q|A Chain A, Solution Structure Of The Nt. Gr-rbp1 Rrm Do... 89 5e-16
dbj|BAA03741.1| RNA-binding glycine-rich protein-1a [Nicotiana s... 89 5e-16
ref|XP_006487137.1| PREDICTED: glycine-rich RNA-binding protein-... 89 6e-16
dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu] 89 6e-16
sp|Q03878.1|GRP1_DAUCA RecName: Full=Glycine-rich RNA-binding pr... 88 1e-15
ref|XP_006365107.1| PREDICTED: glycine-rich RNA-binding protein ... 88 1e-15
ref|XP_006365106.1| PREDICTED: glycine-rich RNA-binding protein ... 88 1e-15
ref|XP_004230948.1| PREDICTED: glycine-rich RNA-binding protein-... 88 1e-15
ref|XP_004230947.1| PREDICTED: glycine-rich RNA-binding protein-... 88 1e-15
ref|XP_004230946.1| PREDICTED: glycine-rich RNA-binding protein-... 88 1e-15
ref|XP_004230945.1| PREDICTED: glycine-rich RNA-binding protein-... 88 1e-15
ref|XP_004230944.1| PREDICTED: glycine-rich RNA-binding protein-... 88 1e-15
ref|XP_004230943.1| PREDICTED: glycine-rich RNA-binding protein-... 88 1e-15
gb|AAC50020.1| RNA-binding protein [Nicotiana glutinosa] 88 1e-15
gb|ABB87126.1| putative glycine-rich RNA binding protein-like [S... 88 1e-15
gb|ACD03270.1| glycine-rich RNA-binding protein [Nicotiana tabacum] 88 1e-15
ref|XP_004289674.1| PREDICTED: uncharacterized protein LOC101299... 87 2e-15
ref|XP_004289673.1| PREDICTED: uncharacterized protein LOC101299... 87 2e-15
>gb|EOX98019.1| Glycine-rich RNA-binding protein 7 [Theobroma cacao]
Length = 168
Score = 90.1 bits (222), Expect = 3e-16
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -3
Query: 402 NDRETGRSRGFGFVTFREEKAMRDAIEGMNGQPLDGRNITVNEAQ 268
NDRETGRSRGFGFVTFR+EKAMRDAIEGMNGQ LDGRNITVNEAQ
Sbjct: 41 NDRETGRSRGFGFVTFRDEKAMRDAIEGMNGQNLDGRNITVNEAQ 85
>gb|ACJ11730.1| glycine-rich RNA-binding protein [Gossypium hirsutum]
Length = 168
Score = 90.1 bits (222), Expect = 3e-16
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -3
Query: 402 NDRETGRSRGFGFVTFREEKAMRDAIEGMNGQPLDGRNITVNEAQ 268
NDRETGRSRGFGFVTFR+EKAMRDAIEGMNGQ LDGRNITVNEAQ
Sbjct: 41 NDRETGRSRGFGFVTFRDEKAMRDAIEGMNGQNLDGRNITVNEAQ 85
>pdb|4C7Q|A Chain A, Solution Structure Of The Nt. Gr-rbp1 Rrm Domain
Length = 86
Score = 89.4 bits (220), Expect = 5e-16
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = -3
Query: 402 NDRETGRSRGFGFVTFREEKAMRDAIEGMNGQPLDGRNITVNEAQ 268
NDRETGRSRGFGFVTF++EKAMRDAIEGMNGQ LDGRNITVNEAQ
Sbjct: 40 NDRETGRSRGFGFVTFKDEKAMRDAIEGMNGQDLDGRNITVNEAQ 84
>dbj|BAA03741.1| RNA-binding glycine-rich protein-1a [Nicotiana sylvestris]
gi|295393563|gb|ADG03637.1| RNA-binding glycine-rich
protein [Nicotiana tabacum]
Length = 156
Score = 89.4 bits (220), Expect = 5e-16
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = -3
Query: 402 NDRETGRSRGFGFVTFREEKAMRDAIEGMNGQPLDGRNITVNEAQ 268
NDRETGRSRGFGFVTF++EKAMRDAIEGMNGQ LDGRNITVNEAQ
Sbjct: 39 NDRETGRSRGFGFVTFKDEKAMRDAIEGMNGQDLDGRNITVNEAQ 83
>ref|XP_006487137.1| PREDICTED: glycine-rich RNA-binding protein-like [Citrus sinensis]
Length = 168
Score = 89.0 bits (219), Expect = 6e-16
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = -3
Query: 402 NDRETGRSRGFGFVTFREEKAMRDAIEGMNGQPLDGRNITVNEAQ 268
NDRETGRSRGFGFVTFR+EK+MRDAIEGMNGQ LDGRNITVNEAQ
Sbjct: 41 NDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 85
>dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]
Length = 167
Score = 89.0 bits (219), Expect = 6e-16
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = -3
Query: 402 NDRETGRSRGFGFVTFREEKAMRDAIEGMNGQPLDGRNITVNEAQ 268
NDRETGRSRGFGFVTFR+EK+MRDAIEGMNGQ LDGRNITVNEAQ
Sbjct: 41 NDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 85
>sp|Q03878.1|GRP1_DAUCA RecName: Full=Glycine-rich RNA-binding protein
gi|18347|emb|CAA41152.1| glycine-rich protein [Daucus
carota] gi|445138|prf||1908438A Gly-rich protein
Length = 157
Score = 88.2 bits (217), Expect = 1e-15
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = -3
Query: 402 NDRETGRSRGFGFVTFREEKAMRDAIEGMNGQPLDGRNITVNEAQ 268
NDRETGRSRGFGFVTF++EK+MRDAIEGMNGQ LDGRNITVNEAQ
Sbjct: 39 NDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNEAQ 83
>ref|XP_006365107.1| PREDICTED: glycine-rich RNA-binding protein 7-like isoform X2
[Solanum tuberosum]
Length = 176
Score = 87.8 bits (216), Expect = 1e-15
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = -3
Query: 402 NDRETGRSRGFGFVTFREEKAMRDAIEGMNGQPLDGRNITVNEAQ 268
NDRETGRSRGFGFVTF++E+AMRDAIEGMNGQ LDGRNITVNEAQ
Sbjct: 39 NDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVNEAQ 83
>ref|XP_006365106.1| PREDICTED: glycine-rich RNA-binding protein 7-like isoform X1
[Solanum tuberosum]
Length = 178
Score = 87.8 bits (216), Expect = 1e-15
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = -3
Query: 402 NDRETGRSRGFGFVTFREEKAMRDAIEGMNGQPLDGRNITVNEAQ 268
NDRETGRSRGFGFVTF++E+AMRDAIEGMNGQ LDGRNITVNEAQ
Sbjct: 39 NDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVNEAQ 83
>ref|XP_004230948.1| PREDICTED: glycine-rich RNA-binding protein-like isoform 6 [Solanum
lycopersicum]
Length = 152
Score = 87.8 bits (216), Expect = 1e-15
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = -3
Query: 402 NDRETGRSRGFGFVTFREEKAMRDAIEGMNGQPLDGRNITVNEAQ 268
NDRETGRSRGFGFVTF++E+AMRDAIEGMNGQ LDGRNITVNEAQ
Sbjct: 39 NDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVNEAQ 83
>ref|XP_004230947.1| PREDICTED: glycine-rich RNA-binding protein-like isoform 5 [Solanum
lycopersicum]
Length = 157
Score = 87.8 bits (216), Expect = 1e-15
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = -3
Query: 402 NDRETGRSRGFGFVTFREEKAMRDAIEGMNGQPLDGRNITVNEAQ 268
NDRETGRSRGFGFVTF++E+AMRDAIEGMNGQ LDGRNITVNEAQ
Sbjct: 39 NDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVNEAQ 83
>ref|XP_004230946.1| PREDICTED: glycine-rich RNA-binding protein-like isoform 4 [Solanum
lycopersicum]
Length = 158
Score = 87.8 bits (216), Expect = 1e-15
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = -3
Query: 402 NDRETGRSRGFGFVTFREEKAMRDAIEGMNGQPLDGRNITVNEAQ 268
NDRETGRSRGFGFVTF++E+AMRDAIEGMNGQ LDGRNITVNEAQ
Sbjct: 39 NDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVNEAQ 83
>ref|XP_004230945.1| PREDICTED: glycine-rich RNA-binding protein-like isoform 3 [Solanum
lycopersicum]
Length = 161
Score = 87.8 bits (216), Expect = 1e-15
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = -3
Query: 402 NDRETGRSRGFGFVTFREEKAMRDAIEGMNGQPLDGRNITVNEAQ 268
NDRETGRSRGFGFVTF++E+AMRDAIEGMNGQ LDGRNITVNEAQ
Sbjct: 39 NDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVNEAQ 83
>ref|XP_004230944.1| PREDICTED: glycine-rich RNA-binding protein-like isoform 2 [Solanum
lycopersicum]
Length = 163
Score = 87.8 bits (216), Expect = 1e-15
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = -3
Query: 402 NDRETGRSRGFGFVTFREEKAMRDAIEGMNGQPLDGRNITVNEAQ 268
NDRETGRSRGFGFVTF++E+AMRDAIEGMNGQ LDGRNITVNEAQ
Sbjct: 39 NDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVNEAQ 83
>ref|XP_004230943.1| PREDICTED: glycine-rich RNA-binding protein-like isoform 1 [Solanum
lycopersicum]
Length = 175
Score = 87.8 bits (216), Expect = 1e-15
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = -3
Query: 402 NDRETGRSRGFGFVTFREEKAMRDAIEGMNGQPLDGRNITVNEAQ 268
NDRETGRSRGFGFVTF++E+AMRDAIEGMNGQ LDGRNITVNEAQ
Sbjct: 39 NDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVNEAQ 83
>gb|AAC50020.1| RNA-binding protein [Nicotiana glutinosa]
Length = 156
Score = 87.8 bits (216), Expect = 1e-15
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = -3
Query: 402 NDRETGRSRGFGFVTFREEKAMRDAIEGMNGQPLDGRNITVNEAQ 268
NDRETGRSRGFGFVTF++E+AMRDAIEGMNGQ LDGRNITVNEAQ
Sbjct: 39 NDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVNEAQ 83
>gb|ABB87126.1| putative glycine-rich RNA binding protein-like [Solanum tuberosum]
Length = 178
Score = 87.8 bits (216), Expect = 1e-15
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = -3
Query: 402 NDRETGRSRGFGFVTFREEKAMRDAIEGMNGQPLDGRNITVNEAQ 268
NDRETGRSRGFGFVTF++E+AMRDAIEGMNGQ LDGRNITVNEAQ
Sbjct: 39 NDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVNEAQ 83
>gb|ACD03270.1| glycine-rich RNA-binding protein [Nicotiana tabacum]
Length = 157
Score = 87.8 bits (216), Expect = 1e-15
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = -3
Query: 402 NDRETGRSRGFGFVTFREEKAMRDAIEGMNGQPLDGRNITVNEAQ 268
NDRETGRSRGFGFVTF++E+AMRDAIEGMNGQ LDGRNITVNEAQ
Sbjct: 39 NDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVNEAQ 83
>ref|XP_004289674.1| PREDICTED: uncharacterized protein LOC101299909 isoform 2 [Fragaria
vesca subsp. vesca]
Length = 161
Score = 87.4 bits (215), Expect = 2e-15
Identities = 42/45 (93%), Positives = 42/45 (93%)
Frame = -3
Query: 402 NDRETGRSRGFGFVTFREEKAMRDAIEGMNGQPLDGRNITVNEAQ 268
NDRETGRSRGFGFVTF EKAMRDAIEGMNGQ LDGRNITVNEAQ
Sbjct: 25 NDRETGRSRGFGFVTFSNEKAMRDAIEGMNGQDLDGRNITVNEAQ 69
>ref|XP_004289673.1| PREDICTED: uncharacterized protein LOC101299909 isoform 1 [Fragaria
vesca subsp. vesca]
Length = 177
Score = 87.4 bits (215), Expect = 2e-15
Identities = 42/45 (93%), Positives = 42/45 (93%)
Frame = -3
Query: 402 NDRETGRSRGFGFVTFREEKAMRDAIEGMNGQPLDGRNITVNEAQ 268
NDRETGRSRGFGFVTF EKAMRDAIEGMNGQ LDGRNITVNEAQ
Sbjct: 41 NDRETGRSRGFGFVTFSNEKAMRDAIEGMNGQDLDGRNITVNEAQ 85