BLASTX nr result
ID: Zingiber23_contig00001507
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00001507
(204 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT08694.1| chloroplast chlorophyll A-B binding protein 40 [H... 87 2e-15
ref|XP_002285646.1| PREDICTED: chlorophyll a-b binding protein 4... 86 4e-15
gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pach... 86 7e-15
gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot... 86 7e-15
ref|XP_004234063.1| PREDICTED: chlorophyll a-b binding protein 3... 84 2e-14
ref|XP_004234062.1| PREDICTED: chlorophyll a-b binding protein 3... 84 2e-14
ref|XP_004234058.1| PREDICTED: chlorophyll a-b binding protein 3... 84 2e-14
ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ... 84 2e-14
ref|XP_004234241.1| PREDICTED: uncharacterized protein LOC101245... 83 4e-14
gb|AAA33396.1| light-harvesting chlorophyll a/b protein precurso... 82 6e-14
gb|ABF69952.1| chlorophyll A-B binding protein (CAB), putative [... 81 2e-13
ref|XP_006356073.1| PREDICTED: chlorophyll a-b binding protein 3... 80 2e-13
gb|AGJ50622.1| chlorophyll a/b binding protein [Salicornia brach... 80 2e-13
gb|AAT08651.1| chloroplast chlorophyll A-B binding protein [Hyac... 80 2e-13
dbj|BAF95850.1| putative chloroplast chlorophyll a/b binding pro... 79 6e-13
emb|CAA78379.1| chlorophyll a/b-binding protein PS II-Type I [So... 79 8e-13
ref|XP_006356077.1| PREDICTED: chlorophyll a-b binding protein 3... 78 1e-12
dbj|BAA11310.1| chlorophyl a/b binding protein [Ipomoea nil] 78 1e-12
dbj|BAA25396.1| light harvesting chlorophyll a/b-binding protein... 78 1e-12
ref|XP_006361530.1| PREDICTED: chlorophyll a-b binding protein 3... 78 1e-12
>gb|AAT08694.1| chloroplast chlorophyll A-B binding protein 40 [Hyacinthus
orientalis]
Length = 211
Score = 87.0 bits (214), Expect = 2e-15
Identities = 41/59 (69%), Positives = 44/59 (74%)
Frame = +3
Query: 27 MASTMAISSPSFVGKPVKLAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKY 203
MASTMA+SSPS G VKL PS S G+ G GRFTMRKT +PK SGSPWYG DRVKY
Sbjct: 1 MASTMALSSPSLAGTAVKLTPSSSSGVSGDGRFTMRKTAAKPKTVSSGSPWYGPDRVKY 59
>ref|XP_002285646.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic [Vitis
vinifera] gi|147833686|emb|CAN73057.1| hypothetical
protein VITISV_007597 [Vitis vinifera]
Length = 267
Score = 86.3 bits (212), Expect = 4e-15
Identities = 44/58 (75%), Positives = 46/58 (79%)
Frame = +3
Query: 30 ASTMAISSPSFVGKPVKLAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKY 203
ASTMA+SSPS GK +KLAPS SD LG G R TMRKTGGR KP SGSPWYG DRVKY
Sbjct: 3 ASTMALSSPSLAGKALKLAPSASDLLGEG-RVTMRKTGGRAKPVSSGSPWYGTDRVKY 59
>gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pachysandra
terminalis]
Length = 267
Score = 85.5 bits (210), Expect = 7e-15
Identities = 43/58 (74%), Positives = 47/58 (81%)
Frame = +3
Query: 30 ASTMAISSPSFVGKPVKLAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKY 203
+STMA+SSPS GK VKLAPS S+ LG G R +MRKTGGRPKP SGSPWYG DRVKY
Sbjct: 3 SSTMALSSPSLAGKAVKLAPSASELLGVG-RVSMRKTGGRPKPVSSGSPWYGPDRVKY 59
>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
cathayensis]
Length = 267
Score = 85.5 bits (210), Expect = 7e-15
Identities = 43/58 (74%), Positives = 46/58 (79%)
Frame = +3
Query: 30 ASTMAISSPSFVGKPVKLAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKY 203
ASTMA+SSPS G+ +KLAPS SD LG G R TMRKT GRPKP SGSPWYG DRVKY
Sbjct: 3 ASTMALSSPSLAGQAIKLAPSSSDLLGEG-RVTMRKTAGRPKPVSSGSPWYGPDRVKY 59
>ref|XP_004234063.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 6 [Solanum lycopersicum]
Length = 244
Score = 84.0 bits (206), Expect = 2e-14
Identities = 41/58 (70%), Positives = 46/58 (79%)
Frame = +3
Query: 30 ASTMAISSPSFVGKPVKLAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKY 203
ASTMA+SS +F GK VKLAPS S+ + G GR TMRKT +PKPA SGSPWYG DRVKY
Sbjct: 3 ASTMALSSSTFAGKTVKLAPSSSE-ISGNGRITMRKTAAKPKPASSGSPWYGPDRVKY 59
>ref|XP_004234062.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 5 [Solanum lycopersicum]
Length = 255
Score = 84.0 bits (206), Expect = 2e-14
Identities = 41/58 (70%), Positives = 46/58 (79%)
Frame = +3
Query: 30 ASTMAISSPSFVGKPVKLAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKY 203
ASTMA+SS +F GK VKLAPS S+ + G GR TMRKT +PKPA SGSPWYG DRVKY
Sbjct: 3 ASTMALSSSTFAGKTVKLAPSSSE-ISGNGRITMRKTAAKPKPASSGSPWYGPDRVKY 59
>ref|XP_004234058.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 1 [Solanum lycopersicum]
gi|460376546|ref|XP_004234059.1| PREDICTED: chlorophyll
a-b binding protein 3C, chloroplastic-like isoform 2
[Solanum lycopersicum] gi|460376548|ref|XP_004234060.1|
PREDICTED: chlorophyll a-b binding protein 3C,
chloroplastic-like isoform 3 [Solanum lycopersicum]
gi|460376550|ref|XP_004234061.1| PREDICTED: chlorophyll
a-b binding protein 3C, chloroplastic-like isoform 4
[Solanum lycopersicum]
Length = 267
Score = 84.0 bits (206), Expect = 2e-14
Identities = 41/58 (70%), Positives = 46/58 (79%)
Frame = +3
Query: 30 ASTMAISSPSFVGKPVKLAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKY 203
ASTMA+SS +F GK VKLAPS S+ + G GR TMRKT +PKPA SGSPWYG DRVKY
Sbjct: 3 ASTMALSSSTFAGKTVKLAPSSSE-ISGNGRITMRKTAAKPKPASSGSPWYGPDRVKY 59
>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Cucumis sativus] gi|449525484|ref|XP_004169747.1|
PREDICTED: chlorophyll a-b binding protein,
chloroplastic-like [Cucumis sativus]
Length = 267
Score = 84.0 bits (206), Expect = 2e-14
Identities = 41/58 (70%), Positives = 47/58 (81%)
Frame = +3
Query: 30 ASTMAISSPSFVGKPVKLAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKY 203
AS+MA+SSPSF G+ VKL+P+ SD LG G R TMRKT G+PKP SGSPWYG DRVKY
Sbjct: 3 ASSMALSSPSFAGQAVKLSPTASDLLGEG-RITMRKTAGKPKPVSSGSPWYGPDRVKY 59
>ref|XP_004234241.1| PREDICTED: uncharacterized protein LOC101245729 [Solanum
lycopersicum]
Length = 554
Score = 82.8 bits (203), Expect = 4e-14
Identities = 40/58 (68%), Positives = 46/58 (79%)
Frame = +3
Query: 30 ASTMAISSPSFVGKPVKLAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKY 203
ASTMA+SS +F GK VKL+PS S+ + G GR TMRKT +PKPA SGSPWYG DRVKY
Sbjct: 3 ASTMALSSSTFAGKAVKLSPSSSE-ISGNGRITMRKTAAKPKPASSGSPWYGPDRVKY 59
Score = 77.8 bits (190), Expect = 1e-12
Identities = 41/65 (63%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Frame = +3
Query: 12 HQSAQMA-STMAISSPSFVGKPVKLAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGA 188
H ++ MA STMA+SS +F GK VKL+PS S+ + G GR TMRKT + KPA SGSPWYG
Sbjct: 283 HSTSIMATSTMALSSSTFAGKAVKLSPSSSE-ITGNGRVTMRKTATKAKPASSGSPWYGP 341
Query: 189 DRVKY 203
DRVKY
Sbjct: 342 DRVKY 346
>gb|AAA33396.1| light-harvesting chlorophyll a/b protein precursor [Lemna gibba]
Length = 266
Score = 82.4 bits (202), Expect = 6e-14
Identities = 40/59 (67%), Positives = 48/59 (81%)
Frame = +3
Query: 27 MASTMAISSPSFVGKPVKLAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKY 203
MA++MA+SSPS VGK VKLAP+ S+ + G GR +MRKT G+PKP SGSPWYG DRVKY
Sbjct: 1 MAASMALSSPSLVGKAVKLAPAASE-VFGEGRVSMRKTAGKPKPVSSGSPWYGPDRVKY 58
>gb|ABF69952.1| chlorophyll A-B binding protein (CAB), putative [Musa acuminata]
Length = 265
Score = 80.9 bits (198), Expect = 2e-13
Identities = 43/59 (72%), Positives = 47/59 (79%)
Frame = +3
Query: 27 MASTMAISSPSFVGKPVKLAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKY 203
MA+TMA+SSPSF GK VKLAPS S G+ G GR TMRK GG+P A SGSPWYG DRVKY
Sbjct: 1 MAATMALSSPSFAGKAVKLAPSAS-GVLGQGRVTMRKAGGKP-AASSGSPWYGPDRVKY 57
>ref|XP_006356073.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
[Solanum tuberosum]
Length = 267
Score = 80.5 bits (197), Expect = 2e-13
Identities = 40/58 (68%), Positives = 46/58 (79%)
Frame = +3
Query: 30 ASTMAISSPSFVGKPVKLAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKY 203
ASTMA+SS +FVGK VKL+PS S+ + G GR TMRKT + KPA SGSPWYG DRVKY
Sbjct: 3 ASTMALSSSTFVGKAVKLSPSSSE-ITGNGRITMRKTAAKAKPASSGSPWYGPDRVKY 59
>gb|AGJ50622.1| chlorophyll a/b binding protein [Salicornia brachiata]
Length = 267
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/58 (65%), Positives = 45/58 (77%)
Frame = +3
Query: 30 ASTMAISSPSFVGKPVKLAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKY 203
+STMA+SSPS GKP+KL P+ ++ LG G R TMRKT G+PK SGSPWYG DRVKY
Sbjct: 3 SSTMALSSPSLAGKPIKLGPNAAEILGEG-RVTMRKTAGKPKQVASGSPWYGPDRVKY 59
>gb|AAT08651.1| chloroplast chlorophyll A-B binding protein [Hyacinthus orientalis]
Length = 239
Score = 80.5 bits (197), Expect = 2e-13
Identities = 40/59 (67%), Positives = 44/59 (74%)
Frame = +3
Query: 27 MASTMAISSPSFVGKPVKLAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKY 203
MASTMA+SSPS G VKL PS S + G GRFTMRKT G+PK SGSPWYG +RVKY
Sbjct: 13 MASTMALSSPSLAGTAVKLTPS-SSVVSGDGRFTMRKTAGKPKTVSSGSPWYGPERVKY 70
>dbj|BAF95850.1| putative chloroplast chlorophyll a/b binding protein [Vitis hybrid
cultivar]
Length = 234
Score = 79.0 bits (193), Expect = 6e-13
Identities = 40/55 (72%), Positives = 42/55 (76%)
Frame = +3
Query: 39 MAISSPSFVGKPVKLAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKY 203
MA+SSPS GK +LAPS SD LG G R TMRKTGGR KP SGSPWYG DRVKY
Sbjct: 4 MALSSPSLAGKAFQLAPSASDLLGEG-RVTMRKTGGRAKPVSSGSPWYGTDRVKY 57
>emb|CAA78379.1| chlorophyll a/b-binding protein PS II-Type I [Solanum tuberosum]
Length = 267
Score = 78.6 bits (192), Expect = 8e-13
Identities = 38/58 (65%), Positives = 45/58 (77%)
Frame = +3
Query: 30 ASTMAISSPSFVGKPVKLAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKY 203
A+TMA+SS +F GK VKL+PS S+ + G GRFTMRKT + KP SGSPWYG DRVKY
Sbjct: 3 AATMALSSSTFAGKAVKLSPSSSE-ITGNGRFTMRKTAAKAKPVSSGSPWYGPDRVKY 59
>ref|XP_006356077.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
[Solanum tuberosum]
Length = 267
Score = 78.2 bits (191), Expect = 1e-12
Identities = 39/57 (68%), Positives = 44/57 (77%)
Frame = +3
Query: 33 STMAISSPSFVGKPVKLAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKY 203
STMA+SS SF GK VKL+PS S+ + G GR TMRKT + KPA SGSPWYG DRVKY
Sbjct: 4 STMALSSSSFAGKAVKLSPSSSE-ITGNGRVTMRKTAAKAKPASSGSPWYGPDRVKY 59
>dbj|BAA11310.1| chlorophyl a/b binding protein [Ipomoea nil]
Length = 68
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/58 (65%), Positives = 44/58 (75%)
Frame = +3
Query: 30 ASTMAISSPSFVGKPVKLAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKY 203
ASTMA+SS SF GK VK++PS + + G FTMRKT G+PKP SGSPWYG DRVKY
Sbjct: 3 ASTMALSSSSFAGKAVKVSPSTPE-ITGNVNFTMRKTAGKPKPVSSGSPWYGPDRVKY 59
>dbj|BAA25396.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 267
Score = 77.8 bits (190), Expect = 1e-12
Identities = 39/58 (67%), Positives = 45/58 (77%)
Frame = +3
Query: 30 ASTMAISSPSFVGKPVKLAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKY 203
ASTMA+SS SFVGK VKL+PS S+ + G G+ TMRKT + KP SGSPWYG DRVKY
Sbjct: 3 ASTMALSSSSFVGKAVKLSPSSSE-ITGNGKVTMRKTATKAKPVSSGSPWYGPDRVKY 59
>ref|XP_006361530.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform X1 [Solanum tuberosum]
gi|565391644|ref|XP_006361531.1| PREDICTED: chlorophyll
a-b binding protein 3C, chloroplastic-like isoform X2
[Solanum tuberosum]
Length = 267
Score = 77.8 bits (190), Expect = 1e-12
Identities = 38/58 (65%), Positives = 45/58 (77%)
Frame = +3
Query: 30 ASTMAISSPSFVGKPVKLAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKY 203
A+TMA+SS +F GK VKL+PS S+ + G GRFTMRKT + KP SGSPWYG DRVKY
Sbjct: 3 AATMALSSSTFAGKAVKLSPSSSE-ITGNGRFTMRKTATKAKPVSSGSPWYGPDRVKY 59