BLASTX nr result
ID: Zanthoxylum22_contig00039443
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zanthoxylum22_contig00039443
(633 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A... 74 1e-16
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A... 74 1e-16
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A... 74 1e-16
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 71 7e-16
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626... 73 3e-15
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A... 73 3e-15
ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617... 71 1e-14
ref|XP_006478211.1| PREDICTED: putative ribonuclease H protein A... 70 2e-14
ref|XP_006478212.1| PREDICTED: putative ribonuclease H protein A... 70 2e-14
ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622... 69 5e-14
ref|XP_006494333.1| PREDICTED: putative ribonuclease H protein A... 67 4e-13
ref|XP_009108245.1| PREDICTED: putative ribonuclease H protein A... 68 8e-11
ref|XP_009103788.1| PREDICTED: uncharacterized protein LOC103829... 68 9e-11
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 65 1e-10
gb|AAP53315.2| retrotransposon protein, putative, unclassified [... 65 1e-10
ref|XP_013650556.1| PREDICTED: uncharacterized protein LOC106355... 68 1e-10
ref|XP_008228453.1| PREDICTED: putative ribonuclease H protein A... 68 2e-10
gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza ... 61 3e-10
gb|ABF97084.1| retrotransposon protein, putative, unclassified [... 61 3e-10
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 65 3e-10
>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X1 [Citrus sinensis]
Length = 968
Score = 73.6 bits (179), Expect(2) = 1e-16
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 9/86 (10%)
Frame = +2
Query: 86 AMNVFRLHWGSCDDINKSNS*VLLGGQLKRSEAIHWLS---------RDGLGFRDLFCFN 238
AM+VF+L G C+D+ K+ + G+ + +IHW R GLGFRDL FN
Sbjct: 418 AMSVFKLPLGLCEDMQKAIA-GFWWGKKREKRSIHWSKWERLCQAKKRGGLGFRDLSSFN 476
Query: 239 QTLVAKQGWRVVQNPDSLVVRVLKSR 316
Q LVAKQ WR++Q P+SLV RV+K +
Sbjct: 477 QALVAKQSWRIIQAPESLVARVMKEK 502
Score = 40.0 bits (92), Expect(2) = 1e-16
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +1
Query: 1 VMSKISNQRSKFFSSGDKEVLIKAVAQ 81
+++KISN ++ FFSSG KE+LIKAVAQ
Sbjct: 386 IINKISNWQANFFSSGGKEILIKAVAQ 412
>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 769
Score = 73.6 bits (179), Expect(2) = 1e-16
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 9/86 (10%)
Frame = +2
Query: 86 AMNVFRLHWGSCDDINKSNS*VLLGGQLKRSEAIHWLS---------RDGLGFRDLFCFN 238
AM+VF+L G C+D+ K+ + G+ + +IHW R GLGFRDL FN
Sbjct: 215 AMSVFKLPLGLCEDMQKAIA-GFWWGKKREKRSIHWSKWERLCQAKKRGGLGFRDLSSFN 273
Query: 239 QTLVAKQGWRVVQNPDSLVVRVLKSR 316
Q LVAKQ WR++Q P+SLV RV+K +
Sbjct: 274 QALVAKQSWRIIQAPESLVARVMKEK 299
Score = 40.0 bits (92), Expect(2) = 1e-16
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +1
Query: 1 VMSKISNQRSKFFSSGDKEVLIKAVAQ 81
+++KISN ++ FFSSG KE+LIKAVAQ
Sbjct: 183 IINKISNWQANFFSSGGKEILIKAVAQ 209
>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X2 [Citrus sinensis]
Length = 765
Score = 73.6 bits (179), Expect(2) = 1e-16
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 9/86 (10%)
Frame = +2
Query: 86 AMNVFRLHWGSCDDINKSNS*VLLGGQLKRSEAIHWLS---------RDGLGFRDLFCFN 238
AM+VF+L G C+D+ K+ + G+ + +IHW R GLGFRDL FN
Sbjct: 215 AMSVFKLPLGLCEDMQKAIA-GFWWGKKREKRSIHWSKWERLCQAKKRGGLGFRDLSSFN 273
Query: 239 QTLVAKQGWRVVQNPDSLVVRVLKSR 316
Q LVAKQ WR++Q P+SLV RV+K +
Sbjct: 274 QALVAKQSWRIIQAPESLVARVMKEK 299
Score = 40.0 bits (92), Expect(2) = 1e-16
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +1
Query: 1 VMSKISNQRSKFFSSGDKEVLIKAVAQ 81
+++KISN ++ FFSSG KE+LIKAVAQ
Sbjct: 183 IINKISNWQANFFSSGGKEILIKAVAQ 209
>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
Length = 2303
Score = 71.2 bits (173), Expect(2) = 7e-16
Identities = 40/86 (46%), Positives = 52/86 (60%), Gaps = 9/86 (10%)
Frame = +2
Query: 86 AMNVFRLHWGSCDDINKSNS*VLLGGQLKRSEAIHWL---------SRDGLGFRDLFCFN 238
AM+VF+L G C++I +S G K IHW SR GLGFRD FN
Sbjct: 781 AMSVFKLPKGLCEEI-QSEIAKFWWGSKKDKRGIHWARWDKLSCAKSRGGLGFRDFISFN 839
Query: 239 QTLVAKQGWRVVQNPDSLVVRVLKSR 316
Q +VAKQGWR++Q P+SLV +VL++R
Sbjct: 840 QAMVAKQGWRLIQFPNSLVSKVLRAR 865
Score = 39.7 bits (91), Expect(2) = 7e-16
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +1
Query: 1 VMSKISNQRSKFFSSGDKEVLIKAVAQ 81
V+SKI+N + K FSSG KE+LIKAVAQ
Sbjct: 749 VLSKINNWQHKMFSSGGKEILIKAVAQ 775
>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
Length = 1452
Score = 72.8 bits (177), Expect(2) = 3e-15
Identities = 42/86 (48%), Positives = 53/86 (61%), Gaps = 9/86 (10%)
Frame = +2
Query: 86 AMNVFRLHWGSCDDINKSNS*VLLGGQLKRSEAIHWLS---------RDGLGFRDLFCFN 238
AM+VF+L G C+DI K + G + K IHW R GLGFRDL FN
Sbjct: 898 AMSVFKLPKGLCEDIQKEIARFWWGTK-KDKHGIHWARWDSMSKAKRRGGLGFRDLPSFN 956
Query: 239 QTLVAKQGWRVVQNPDSLVVRVLKSR 316
Q LVAKQGWR+V+ P+SL+ RV+K+R
Sbjct: 957 QALVAKQGWRLVRYPNSLMARVMKAR 982
Score = 36.2 bits (82), Expect(2) = 3e-15
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +1
Query: 1 VMSKISNQRSKFFSSGDKEVLIKAVAQ 81
V SKIS+ K FS+G KE+LIKAVAQ
Sbjct: 866 VTSKISSWHHKLFSAGGKEILIKAVAQ 892
>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 765
Score = 72.8 bits (177), Expect(2) = 3e-15
Identities = 42/86 (48%), Positives = 53/86 (61%), Gaps = 9/86 (10%)
Frame = +2
Query: 86 AMNVFRLHWGSCDDINKSNS*VLLGGQLKRSEAIHWLS---------RDGLGFRDLFCFN 238
AM+VF+L G C+DI K + G + K IHW R GLGFRDL FN
Sbjct: 211 AMSVFKLPKGLCEDIQKEIARFWWGTK-KDKHGIHWARWDSMSKAKRRGGLGFRDLPSFN 269
Query: 239 QTLVAKQGWRVVQNPDSLVVRVLKSR 316
Q LVAKQGWR+V+ P+SL+ RV+K+R
Sbjct: 270 QALVAKQGWRLVRYPNSLMARVMKAR 295
Score = 36.2 bits (82), Expect(2) = 3e-15
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +1
Query: 1 VMSKISNQRSKFFSSGDKEVLIKAVAQ 81
V SKIS+ K FS+G KE+LIKAVAQ
Sbjct: 179 VTSKISSWHHKLFSAGGKEILIKAVAQ 205
>ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617714 [Citrus sinensis]
Length = 1238
Score = 71.2 bits (173), Expect(2) = 1e-14
Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 9/84 (10%)
Frame = +2
Query: 86 AMNVFRLHWGSCDDINKSNS*VLLGGQLKRSEAIHWLS---------RDGLGFRDLFCFN 238
AM+VF+L C+DI K+ + G R IHW R G+GFRD FN
Sbjct: 729 AMSVFKLPASICEDIQKAIARFWWGSSSDR-RGIHWAKWEKLCQAKMRGGMGFRDFTSFN 787
Query: 239 QTLVAKQGWRVVQNPDSLVVRVLK 310
Q L+AKQGWR++Q+P+SL+ RVLK
Sbjct: 788 QALIAKQGWRIIQHPESLMARVLK 811
Score = 35.4 bits (80), Expect(2) = 1e-14
Identities = 16/27 (59%), Positives = 23/27 (85%)
Frame = +1
Query: 1 VMSKISNQRSKFFSSGDKEVLIKAVAQ 81
+ +K+S+ ++K FSSG +EVLIKAVAQ
Sbjct: 697 IWNKLSSWQNKLFSSGGREVLIKAVAQ 723
>ref|XP_006478211.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X1 [Citrus sinensis]
Length = 478
Score = 70.1 bits (170), Expect(2) = 2e-14
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 9/86 (10%)
Frame = +2
Query: 86 AMNVFRLHWGSCDDINKSNS*VLLGGQLKRSEAIHWL---------SRDGLGFRDLFCFN 238
AM+VF++ G CDDI ++ + G R +IHW +R GLGFR+ FN
Sbjct: 240 AMSVFKIPQGLCDDIQRAVARFWWGSSETR-RSIHWARWEKLCSAKTRGGLGFREFSSFN 298
Query: 239 QTLVAKQGWRVVQNPDSLVVRVLKSR 316
Q L+AKQGWRV+ N DSL+ ++LK++
Sbjct: 299 QALIAKQGWRVLHNLDSLMAKILKAK 324
Score = 36.2 bits (82), Expect(2) = 2e-14
Identities = 17/27 (62%), Positives = 24/27 (88%)
Frame = +1
Query: 1 VMSKISNQRSKFFSSGDKEVLIKAVAQ 81
V++K+S+ +++ FSSG KEVLIKAVAQ
Sbjct: 208 VLNKLSSWQTRSFSSGGKEVLIKAVAQ 234
>ref|XP_006478212.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X2 [Citrus sinensis]
Length = 387
Score = 70.1 bits (170), Expect(2) = 2e-14
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 9/86 (10%)
Frame = +2
Query: 86 AMNVFRLHWGSCDDINKSNS*VLLGGQLKRSEAIHWL---------SRDGLGFRDLFCFN 238
AM+VF++ G CDDI ++ + G R +IHW +R GLGFR+ FN
Sbjct: 149 AMSVFKIPQGLCDDIQRAVARFWWGSSETR-RSIHWARWEKLCSAKTRGGLGFREFSSFN 207
Query: 239 QTLVAKQGWRVVQNPDSLVVRVLKSR 316
Q L+AKQGWRV+ N DSL+ ++LK++
Sbjct: 208 QALIAKQGWRVLHNLDSLMAKILKAK 233
Score = 36.2 bits (82), Expect(2) = 2e-14
Identities = 17/27 (62%), Positives = 24/27 (88%)
Frame = +1
Query: 1 VMSKISNQRSKFFSSGDKEVLIKAVAQ 81
V++K+S+ +++ FSSG KEVLIKAVAQ
Sbjct: 117 VLNKLSSWQTRSFSSGGKEVLIKAVAQ 143
>ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622884 [Citrus sinensis]
Length = 1160
Score = 69.3 bits (168), Expect(2) = 5e-14
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 9/86 (10%)
Frame = +2
Query: 86 AMNVFRLHWGSCDDINKSNS*VLLGGQLKRSEAIHWLS---------RDGLGFRDLFCFN 238
AM+VF++ G C+DI + G +R +IHW + G+GFRD FN
Sbjct: 574 AMSVFKIPLGICEDIQRIVGNFWWGSSRER-RSIHWSKWEKMSQAKCKGGMGFRDFASFN 632
Query: 239 QTLVAKQGWRVVQNPDSLVVRVLKSR 316
Q L+AKQGWR+ Q PDSLV RVL++R
Sbjct: 633 QALLAKQGWRIQQCPDSLVARVLQAR 658
Score = 35.4 bits (80), Expect(2) = 5e-14
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +1
Query: 1 VMSKISNQRSKFFSSGDKEVLIKAVAQ 81
V++KIS+ + KFFS G KEVLIKA Q
Sbjct: 542 VLNKISSWQHKFFSCGGKEVLIKAAVQ 568
>ref|XP_006494333.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 351
Score = 67.0 bits (162), Expect(2) = 4e-13
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 9/91 (9%)
Frame = +2
Query: 86 AMNVFRLHWGSCDDINKSNS*VLLGGQLKRSEAIHWL---------SRDGLGFRDLFCFN 238
AM++F+L G CDDI + + + + IHW SR+GLGFR++ FN
Sbjct: 221 AMSIFKLPLGLCDDIQNAMAKFWWRSK-EDKRGIHWARWGKMSHAKSREGLGFREMSSFN 279
Query: 239 QTLVAKQGWRVVQNPDSLVVRVLKSRDILET 331
+ LVAKQGWR++Q P+ V RV K+R ET
Sbjct: 280 RALVAKQGWRLLQYPELFVTRVPKARYYKET 310
Score = 34.7 bits (78), Expect(2) = 4e-13
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = +1
Query: 1 VMSKISNQRSKFFSSGDKEVLIKAVAQ 81
V+SKI++ + +FFSS KEVLIKA+AQ
Sbjct: 189 VVSKITSWQHRFFSSEGKEVLIKAMAQ 215
>ref|XP_009108245.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 459
Score = 67.8 bits (164), Expect(2) = 8e-11
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 9/86 (10%)
Frame = +2
Query: 86 AMNVFRLHWGSCDDINKSNS*VLLGGQLKRSEAIHWLS---------RDGLGFRDLFCFN 238
+MNVFRL CD+IN + G +K+ +HW S GLGFRDL FN
Sbjct: 70 SMNVFRLPRNICDEINSILAKFWWGSGVKKG--MHWYSWKRVSVPKREGGLGFRDLEKFN 127
Query: 239 QTLVAKQGWRVVQNPDSLVVRVLKSR 316
Q L+ KQ WR++QNP L+ R++K+R
Sbjct: 128 QALLGKQVWRIIQNPQCLMARIIKAR 153
Score = 26.2 bits (56), Expect(2) = 8e-11
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 31 KFFSSGDKEVLIKAVA 78
KF S G KEVL+KAVA
Sbjct: 48 KFLSHGGKEVLLKAVA 63
>ref|XP_009103788.1| PREDICTED: uncharacterized protein LOC103829849 [Brassica rapa]
Length = 1405
Score = 68.2 bits (165), Expect(2) = 9e-11
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 9/86 (10%)
Frame = +2
Query: 86 AMNVFRLHWGSCDDINKSNS*VLLGGQLKRSEAIHWLS---------RDGLGFRDLFCFN 238
AM+ F+L SCD+++K+ + L+ +HWLS + GLGF+D+ FN
Sbjct: 831 AMSCFKLTKTSCDNLSKAMA-DFWWNSLEHKRKMHWLSWTKLCLAKEQGGLGFKDIQSFN 889
Query: 239 QTLVAKQGWRVVQNPDSLVVRVLKSR 316
Q L+AKQ WR++ +PDSL+ RV KSR
Sbjct: 890 QALLAKQAWRILNHPDSLLARVFKSR 915
Score = 25.4 bits (54), Expect(2) = 9e-11
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 10 KISNQRSKFFSSGDKEVLIKAVA 78
++S +K S G KE+LIKAVA
Sbjct: 802 RLSGWFAKLLSLGGKEILIKAVA 824
>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1509
Score = 64.7 bits (156), Expect(2) = 1e-10
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 9/86 (10%)
Frame = +2
Query: 86 AMNVFRLHWGSCDDINKSNS*VLLGGQLKRSEAIHWLSRD---------GLGFRDLFCFN 238
AM F L CD I+K + Q K ++ +HWLS + GLGFRD++ FN
Sbjct: 1005 AMGCFELTKDLCDQISKMIAKYWWSNQEKDNK-MHWLSWNKLTLPKNMGGLGFRDIYIFN 1063
Query: 239 QTLVAKQGWRVVQNPDSLVVRVLKSR 316
++AKQGWR++Q+PDSL RVL+++
Sbjct: 1064 LAMLAKQGWRLIQDPDSLCSRVLRAK 1089
Score = 28.5 bits (62), Expect(2) = 1e-10
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 1 VMSKISNQRSKFFSSGDKEVLIKAVAQV 84
+ +I + K S KE+LIKAVAQV
Sbjct: 973 IWQRIQGWKEKLLSRAGKEILIKAVAQV 1000
>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1505
Score = 64.7 bits (156), Expect(2) = 1e-10
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 9/86 (10%)
Frame = +2
Query: 86 AMNVFRLHWGSCDDINKSNS*VLLGGQLKRSEAIHWLSRD---------GLGFRDLFCFN 238
AM F L CD I+K + Q K ++ +HWLS + GLGFRD++ FN
Sbjct: 1001 AMGCFELTKDLCDQISKMIAKYWWSNQEKDNK-MHWLSWNKLTLPKNMGGLGFRDIYIFN 1059
Query: 239 QTLVAKQGWRVVQNPDSLVVRVLKSR 316
++AKQGWR++Q+PDSL RVL+++
Sbjct: 1060 LAMLAKQGWRLIQDPDSLCSRVLRAK 1085
Score = 28.5 bits (62), Expect(2) = 1e-10
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 1 VMSKISNQRSKFFSSGDKEVLIKAVAQV 84
+ +I + K S KE+LIKAVAQV
Sbjct: 969 IWQRIQGWKEKLLSRAGKEILIKAVAQV 996
>ref|XP_013650556.1| PREDICTED: uncharacterized protein LOC106355090 [Brassica napus]
Length = 930
Score = 67.8 bits (164), Expect(2) = 1e-10
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 9/86 (10%)
Frame = +2
Query: 86 AMNVFRLHWGSCDDINKSNS*VLLGGQLKRSEAIHWLS---------RDGLGFRDLFCFN 238
AM+ F+L SCD++ K+ + L+ +HWLS + GLGF+D+ FN
Sbjct: 356 AMSCFKLTKTSCDNLTKAMA-DFWWNSLEHKRKMHWLSWTKLCLAKEQGGLGFKDIQSFN 414
Query: 239 QTLVAKQGWRVVQNPDSLVVRVLKSR 316
Q L+AKQ WR++ +PDSL+ RV KSR
Sbjct: 415 QALLAKQAWRILNHPDSLLARVFKSR 440
Score = 25.4 bits (54), Expect(2) = 1e-10
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 10 KISNQRSKFFSSGDKEVLIKAVA 78
++S +K S G KE+LIKAVA
Sbjct: 327 RLSGWFAKLLSLGGKEILIKAVA 349
>ref|XP_008228453.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
Length = 658
Score = 67.8 bits (164), Expect(2) = 2e-10
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 9/86 (10%)
Frame = +2
Query: 86 AMNVFRLHWGSCDDINKSNS*VLLGGQLKRSEAIHWLSRD---------GLGFRDLFCFN 238
+M+V+ L CDD+N+ + G IHWL+ D GLGFRDL+ FN
Sbjct: 174 SMSVYLLPKYFCDDLNRLIADFWWNGN-NGDRKIHWLAWDKLCQPKDVGGLGFRDLYAFN 232
Query: 239 QTLVAKQGWRVVQNPDSLVVRVLKSR 316
++AKQGWR++Q PDSL+ RVL+++
Sbjct: 233 LAMLAKQGWRLIQYPDSLIARVLRAK 258
Score = 24.6 bits (52), Expect(2) = 2e-10
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 10 KISNQRSKFFSSGDKEVLIKAVAQ 81
K+ + K S KE+LIK VAQ
Sbjct: 145 KLYGWKGKLLSGAGKEILIKTVAQ 168
>gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1185
Score = 61.2 bits (147), Expect(2) = 3e-10
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 9/86 (10%)
Frame = +2
Query: 86 AMNVFRLHWGSCDDINKSNS*VLLGGQLKRSEAIHWLS---------RDGLGFRDLFCFN 238
AM+VFR+ CD I+++ + G + IHW + R GLGFRDL+CFN
Sbjct: 622 AMSVFRIPKKICDCISEAIARFWWGDD-ENHRRIHWKAWWRMCIPKQRGGLGFRDLYCFN 680
Query: 239 QTLVAKQGWRVVQNPDSLVVRVLKSR 316
+ ++AKQ WR + +PDSL RV++ +
Sbjct: 681 RAMLAKQIWRFLCDPDSLCARVMRCK 706
Score = 30.8 bits (68), Expect(2) = 3e-10
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +1
Query: 1 VMSKISNQRSKFFSSGDKEVLIKAVAQ 81
V ++I+ ++ K S+G KEVLIK++AQ
Sbjct: 590 VNNRINGRKEKMLSTGGKEVLIKSIAQ 616
>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1184
Score = 61.2 bits (147), Expect(2) = 3e-10
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 9/86 (10%)
Frame = +2
Query: 86 AMNVFRLHWGSCDDINKSNS*VLLGGQLKRSEAIHWLS---------RDGLGFRDLFCFN 238
AM+VFR+ CD I+++ + G + IHW + R GLGFRDL+CFN
Sbjct: 622 AMSVFRIPKKICDCISEAIARFWWGDD-ENHRRIHWKAWWRMCIPKQRGGLGFRDLYCFN 680
Query: 239 QTLVAKQGWRVVQNPDSLVVRVLKSR 316
+ ++AKQ WR + +PDSL RV++ +
Sbjct: 681 RAMLAKQIWRFLCDPDSLCARVMRCK 706
Score = 30.8 bits (68), Expect(2) = 3e-10
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +1
Query: 1 VMSKISNQRSKFFSSGDKEVLIKAVAQ 81
V ++I+ ++ K S+G KEVLIK++AQ
Sbjct: 590 VNNRINGRKEKMLSTGGKEVLIKSIAQ 616
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 64.7 bits (156), Expect(2) = 3e-10
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 9/86 (10%)
Frame = +2
Query: 86 AMNVFRLHWGSCDDINKSNS*VLLGGQLKRSEAIHWLSRD---------GLGFRDLFCFN 238
AM F L CD I+K + Q K ++ +HWLS + GLGFRD++ FN
Sbjct: 1060 AMGCFELTKDLCDQISKMIAKYWWSNQEKDNK-MHWLSWNKLTLPKNMGGLGFRDIYIFN 1118
Query: 239 QTLVAKQGWRVVQNPDSLVVRVLKSR 316
++AKQGWR++Q+PDSL RVL+++
Sbjct: 1119 LAMLAKQGWRLIQDPDSLCSRVLRAK 1144
Score = 26.9 bits (58), Expect(2) = 3e-10
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 1 VMSKISNQRSKFFSSGDKEVLIKAVAQ 81
+ +I + K S KE+LIKAVAQ
Sbjct: 1028 IWQRIQGWKEKLLSRAGKEILIKAVAQ 1054