BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00034342
         (875 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_068549.1| replicase [Botrytis virus F] gi|81968259|sp|Q9D...    77   2e-11
gb|AGE84283.1| replicase-associated protein, partial [Culex orig...    65   9e-08
ref|YP_006843893.1| replicase-associated protein [Culex originat...    65   9e-08
gb|ALM62223.1| RNA-dependent RNA polymerase [Soybean-associated ...    60   2e-06
ref|YP_001655010.1| replicase protein [Phaius virus X] gi|166157...    59   6e-06

>ref|NP_068549.1| replicase [Botrytis virus F] gi|81968259|sp|Q9DRA1.1|RDRP_BOTVF
            RecName: Full=RNA replication protein; Includes: RecName:
            Full=RNA-directed RNA polymerase; Includes: RecName:
            Full=Helicase; Includes: RecName: Full=Methyltransferase
            gi|10801178|gb|AAG23416.1|AF238884_2 replicase [Botrytis
            virus F]
          Length = 1896

 Score = 77.0 bits (188), Expect = 2e-11
 Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 4/133 (3%)
 Frame = +2

Query: 425  QSLDAIIDYWRGNHTTRSVPIVAYFGVWGSGKTTATMEYMRSLSDERR---RQVRVVSHT 595
            + LDA ID W  N   RSV ++ + G+ G+GK+   M+    L  E +   + VR+V+ T
Sbjct: 1034 EQLDAYIDSWAVNGFNRSVHVIYFCGLPGTGKSRRCMKMTERLLKENKYLAQTVRIVTPT 1093

Query: 596  ESLRAQSKLALDFPSLRGFNFPTLASIITEPSTGPI-VFDDAGKFWGGMLDLVILCNPLV 772
            ++LR      L  P+   ++  T  + I +PS GP+ + D+ GK   G L+ V+  NP V
Sbjct: 1094 DNLRNSVARQLKPPTESSYSVQTYETPIRQPSLGPVLIVDEYGKMPAGWLETVLFLNPRV 1153

Query: 773  DEIVLNGDPAQGL 811
              ++   DP QG+
Sbjct: 1154 QMVIFTADPTQGI 1166


>gb|AGE84283.1| replicase-associated protein, partial [Culex originated
            Tymoviridae-like virus]
          Length = 1761

 Score = 64.7 bits (156), Expect = 9e-08
 Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 3/163 (1%)
 Frame = +2

Query: 329  DYVADVDRASRLVADLRAH-PSVLESF--NNPQVIQSLDAIIDYWRGNHTTRSVPIVAYF 499
            DY  D+ RA +L ++++ H   VL      +P ++ + D+I+D+      + SV +    
Sbjct: 844  DYQIDLSRAKKLASNMKNHFDGVLRELLSASPNILHAFDSIVDF----APSHSVRLCHLA 899

Query: 500  GVWGSGKTTATMEYMRSLSDERRRQVRVVSHTESLRAQSKLALDFPSLRGFNFPTLASII 679
            G  G GK+     + R    E  R++RV      LR+  K  L FP+ + +   T  + +
Sbjct: 900  GFAGCGKSRPIQSFFRG--SEYSRELRVAVPNTDLRSHWKAQLRFPNSQSWRVSTWETSL 957

Query: 680  TEPSTGPIVFDDAGKFWGGMLDLVILCNPLVDEIVLNGDPAQG 808
             + +   ++ D+  K   G LDL +L +P V  +++ GDP QG
Sbjct: 958  LKHAR-ILIIDEIYKMPPGFLDLALLLDPCVATVIILGDPLQG 999


>ref|YP_006843893.1| replicase-associated protein [Culex originated Tymoviridae-like
            virus] gi|407171243|gb|AFT60444.1| replicase-associated
            protein [Culex originated Tymoviridae-like virus]
          Length = 1769

 Score = 64.7 bits (156), Expect = 9e-08
 Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 3/163 (1%)
 Frame = +2

Query: 329  DYVADVDRASRLVADLRAH-PSVLESF--NNPQVIQSLDAIIDYWRGNHTTRSVPIVAYF 499
            DY  D+ RA +L ++++ H   VL      +P ++ + D+I+D+      + SV +    
Sbjct: 844  DYQIDLSRAKKLASNMKNHFDGVLRELLSASPNILHAFDSIVDF----APSHSVRLCHLA 899

Query: 500  GVWGSGKTTATMEYMRSLSDERRRQVRVVSHTESLRAQSKLALDFPSLRGFNFPTLASII 679
            G  G GK+     + R    E  R++RV      LR+  K  L FP+ + +   T  + +
Sbjct: 900  GFAGCGKSRPIQSFFRG--SEYSRELRVAVPNTDLRSHWKAQLRFPNSQSWRVSTWETSL 957

Query: 680  TEPSTGPIVFDDAGKFWGGMLDLVILCNPLVDEIVLNGDPAQG 808
             + +   ++ D+  K   G LDL +L +P V  +++ GDP QG
Sbjct: 958  LKHAR-ILIIDEIYKMPPGFLDLALLLDPCVATVIILGDPLQG 999


>gb|ALM62223.1| RNA-dependent RNA polymerase [Soybean-associated mycoflexivirus 1]
          Length = 2084

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 53/183 (28%), Positives = 80/183 (43%), Gaps = 15/183 (8%)
 Frame = +2

Query: 341  DVDRASRLVADLRAHPSVLE--SFNNPQVIQSLDAII---DYWRGNHTTRSVPIVAYF-- 499
            D   A  L +D +A P+ L+   FN     ++LD +    D +  N T  + P V +   
Sbjct: 1166 DAGYARALASDFKAKPAALDLTDFNPVDAARTLDQMAKQYDNFVRNGTGLAYPNVTFHIF 1225

Query: 500  -GVWGSGKTTATMEYMRSLSDERR-RQVRVVSHTESLRAQSKL------ALDFPSLRGFN 655
             GV G GKT   ++ +   +  +      ++ HT     +SK       AL    L+  +
Sbjct: 1226 HGVGGGGKTHRMIQDLAIANAAKPFTPADIMFHTADHNLRSKFMAEVIAALPNVGLQNNH 1285

Query: 656  FPTLASIITEPSTGPIVFDDAGKFWGGMLDLVILCNPLVDEIVLNGDPAQGLAQFPVAGT 835
            F T    +  P+ G +VFDD G  +   L L + CNP V +I L  D AQG    P A  
Sbjct: 1286 FTTSCVPLVRPAAGTVVFDDVGLTFNSFLPLFMACNPGVTDIWLTFDCAQGQGVIPTANA 1345

Query: 836  QSQ 844
             S+
Sbjct: 1346 ISR 1348


>ref|YP_001655010.1| replicase protein [Phaius virus X] gi|166157387|dbj|BAG06154.1|
           replicase protein [Phaius virus X]
          Length = 1298

 Score = 58.5 bits (140), Expect = 6e-06
 Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
 Frame = +2

Query: 452 WRGNHTTR------SVPIVAYFGVWGSGKTTATMEYMRSLSDERRRQVRVVSHTESLRAQ 613
           W+ N  TR      ++P+V   G  GSGK+    E++R+ +     QV +V  T  LRA 
Sbjct: 559 WKKNFATRVELGNRTLPVVVIHGAGGSGKSHVLQEFLRNQA-HGYDQVGLVLPTVELRAD 617

Query: 614 SKLALDFPSLRGFNFPTLASIITEPSTGPIVFDDAGKFWGGMLDLVILCNPLVDEIVLNG 793
               +  P ++  NF T    + +PS   ++ DD  K   G ++   L +P V  ++L G
Sbjct: 618 WMAKV--PKMKERNFRTFEKAMVQPSPRTVIMDDYSKLPAGYVEAFCLFHPEVRTLILTG 675

Query: 794 DPAQ 805
           DP Q
Sbjct: 676 DPQQ 679