BLASTX nr result

ID: Zanthoxylum22_contig00028795 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00028795
         (317 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_009166183.1| Ycf1 (chloroplast) [Zanthoxylum piperitum] g...    76   1e-11
ref|YP_740535.1| hypothetical chloroplast RF1 (chloroplast) [Cit...    69   1e-09
ref|YP_009059410.1| hypothetical chloroplast RF19 (chloroplast) ...    69   2e-09
gb|ADD30903.1| putative RF1 protein (chloroplast) [Aucuba japonica]    61   3e-07
gb|ADD30913.1| putative RF1 protein (chloroplast) [Berberidopsis...    59   2e-06
gb|ADD30906.1| putative RF1 protein (chloroplast) [Ilex cornuta]       58   3e-06
gb|AHF71464.1| hypothetical chloroplast RF1 (chloroplast) [Acer ...    57   5e-06
gb|ADK89836.1| hypothetical chloroplast RF19 (chloroplast) [Tied...    56   9e-06

>ref|YP_009166183.1| Ycf1 (chloroplast) [Zanthoxylum piperitum]
            gi|918056483|gb|AKZ89380.1| Ycf1 (chloroplast)
            [Zanthoxylum piperitum]
          Length = 1828

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 35/46 (76%), Positives = 39/46 (84%)
 Frame = -2

Query: 148  LSLECSGDSNQNTKIGSDNYKKIDAINKRGPFYLTIHQDEEINPSN 11
            + ++    SNQ+TKIGSDN KKIDAINKR PFYLTIHQDEEINPSN
Sbjct: 1389 VDMDTGTSSNQHTKIGSDNSKKIDAINKRSPFYLTIHQDEEINPSN 1434


>ref|YP_740535.1| hypothetical chloroplast RF1 (chloroplast) [Citrus sinensis]
            gi|118574746|sp|Q09MB8.1|TI214_CITSI RecName:
            Full=Protein TIC 214; AltName: Full=Translocon at the
            inner envelope membrane of chloroplasts 214;
            Short=AtTIC214 gi|113952681|gb|ABI49079.1| hypothetical
            chloroplast RF1 (chloroplast) [Citrus sinensis]
          Length = 1829

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 31/45 (68%), Positives = 38/45 (84%)
 Frame = -2

Query: 148  LSLECSGDSNQNTKIGSDNYKKIDAINKRGPFYLTIHQDEEINPS 14
            + ++    SNQNT+IGS+NY+KI+AIN R PFYLTIHQDEEINPS
Sbjct: 1390 VDMDTGTSSNQNTRIGSNNYQKINAINNRVPFYLTIHQDEEINPS 1434


>ref|YP_009059410.1| hypothetical chloroplast RF19 (chloroplast) [Citrus aurantiifolia]
            gi|675269943|gb|AIL50334.1| hypothetical chloroplast RF19
            (chloroplast) [Citrus aurantiifolia]
          Length = 1829

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 31/45 (68%), Positives = 37/45 (82%)
 Frame = -2

Query: 148  LSLECSGDSNQNTKIGSDNYKKIDAINKRGPFYLTIHQDEEINPS 14
            + ++    SNQNT+IGS+NYKKI+AIN R PFYL IHQDEEINPS
Sbjct: 1390 VDMDTGTSSNQNTRIGSNNYKKINAINNRVPFYLPIHQDEEINPS 1434


>gb|ADD30903.1| putative RF1 protein (chloroplast) [Aucuba japonica]
          Length = 1890

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 27/38 (71%), Positives = 33/38 (86%)
 Frame = -2

Query: 124  SNQNTKIGSDNYKKIDAINKRGPFYLTIHQDEEINPSN 11
            SN+NTKIG++NY+ I+ INK+G FYLTIHQD EINP N
Sbjct: 1455 SNKNTKIGTNNYQIIEKINKKGLFYLTIHQDSEINPPN 1492


>gb|ADD30913.1| putative RF1 protein (chloroplast) [Berberidopsis corallina]
          Length = 1909

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 26/46 (56%), Positives = 36/46 (78%)
 Frame = -2

Query: 148  LSLECSGDSNQNTKIGSDNYKKIDAINKRGPFYLTIHQDEEINPSN 11
            + +  S +SN+NTK G++NY+ ID I+K+G F LTIHQD+EINP N
Sbjct: 1466 IDINTSTNSNKNTKTGTNNYQIIDKIDKKGLFSLTIHQDQEINPPN 1511


>gb|ADD30906.1| putative RF1 protein (chloroplast) [Ilex cornuta]
          Length = 1897

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 26/44 (59%), Positives = 34/44 (77%)
 Frame = -2

Query: 142  LECSGDSNQNTKIGSDNYKKIDAINKRGPFYLTIHQDEEINPSN 11
            ++   +SN+ TKIG++NY  ID I+K+G FYLTIHQD EINP N
Sbjct: 1455 IKIDSNSNKKTKIGTNNYPIIDKIDKKGLFYLTIHQDLEINPPN 1498


>gb|AHF71464.1| hypothetical chloroplast RF1 (chloroplast) [Acer buergerianum subsp.
            ningpoense]
          Length = 1841

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 26/37 (70%), Positives = 30/37 (81%)
 Frame = -2

Query: 121  NQNTKIGSDNYKKIDAINKRGPFYLTIHQDEEINPSN 11
            N NTKIG+D Y+ ID INK+  FYLTIH+DEEI PSN
Sbjct: 1410 NPNTKIGADKYQIIDEINKKVLFYLTIHEDEEIKPSN 1446


>gb|ADK89836.1| hypothetical chloroplast RF19 (chloroplast) [Tiedemannia filiformis
            subsp. greenmannii]
          Length = 1816

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 27/39 (69%), Positives = 30/39 (76%)
 Frame = -2

Query: 127  DSNQNTKIGSDNYKKIDAINKRGPFYLTIHQDEEINPSN 11
            +SN NTK+GS NY+KI  INK   FYLTIHQD EINP N
Sbjct: 1407 NSNINTKLGSKNYQKIAKINKNDIFYLTIHQDLEINPIN 1445


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