BLASTX nr result

ID: Zanthoxylum22_contig00023692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00023692
         (288 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KDO64251.1| hypothetical protein CISIN_1g007084mg [Citrus sin...    65   3e-08
ref|XP_006429692.1| hypothetical protein CICLE_v10013510mg [Citr...    64   3e-08
gb|KHG04586.1| DEAD-box ATP-dependent RNA helicase 53 -like prot...    58   2e-06

>gb|KDO64251.1| hypothetical protein CISIN_1g007084mg [Citrus sinensis]
           gi|641845364|gb|KDO64252.1| hypothetical protein
           CISIN_1g007084mg [Citrus sinensis]
           gi|641845365|gb|KDO64253.1| hypothetical protein
           CISIN_1g007084mg [Citrus sinensis]
          Length = 618

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 39/75 (52%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
 Frame = -2

Query: 230 NMFSVMGGRSGYGSMRDRGYGDTGFGRSSPVG-YGFGRSGGDMFNDMGGRSRFGSMRDHG 54
           +M++ MGGRSGYGSMRDR Y DTGF RSS +G  GFGRSGG       G  R+G   +  
Sbjct: 479 DMYNDMGGRSGYGSMRDRQYADTGFDRSSRMGDSGFGRSGG---YRSPGSGRYGG-NNSS 534

Query: 53  YGDTGFGHSNRPVGS 9
           Y   G G S+   GS
Sbjct: 535 YSGQGGGSSSGGFGS 549



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 26/38 (68%), Positives = 29/38 (76%)
 Frame = -2

Query: 116 GGDMFNDMGGRSRFGSMRDHGYGDTGFGHSNRPVGSGF 3
           GGDM+NDMGGRS +GSMRD  Y DTGF  S+R   SGF
Sbjct: 477 GGDMYNDMGGRSGYGSMRDRQYADTGFDRSSRMGDSGF 514


>ref|XP_006429692.1| hypothetical protein CICLE_v10013510mg [Citrus clementina]
           gi|568855395|ref|XP_006481292.1| PREDICTED: DEAD-box
           ATP-dependent RNA helicase 53-like isoform X1 [Citrus
           sinensis] gi|568855397|ref|XP_006481293.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 53-like isoform X2
           [Citrus sinensis] gi|557531749|gb|ESR42932.1|
           hypothetical protein CICLE_v10013510mg [Citrus
           clementina]
          Length = 618

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 39/75 (52%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
 Frame = -2

Query: 230 NMFSVMGGRSGYGSMRDRGYGDTGFGRSSPVG-YGFGRSGGDMFNDMGGRSRFGSMRDHG 54
           +M++ MGGRSGYGSMRDR Y DTGF RSS +G  GFGRSGG       G  R+G   +  
Sbjct: 479 DMYNDMGGRSGYGSMRDRQYADTGFDRSSRMGDSGFGRSGG---YRSPGSGRYGGY-NSS 534

Query: 53  YGDTGFGHSNRPVGS 9
           Y   G G S+   GS
Sbjct: 535 YSGQGGGSSSGGFGS 549



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 26/38 (68%), Positives = 29/38 (76%)
 Frame = -2

Query: 116 GGDMFNDMGGRSRFGSMRDHGYGDTGFGHSNRPVGSGF 3
           GGDM+NDMGGRS +GSMRD  Y DTGF  S+R   SGF
Sbjct: 477 GGDMYNDMGGRSGYGSMRDRQYADTGFDRSSRMGDSGF 514


>gb|KHG04586.1| DEAD-box ATP-dependent RNA helicase 53 -like protein [Gossypium
           arboreum]
          Length = 643

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 40/87 (45%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
 Frame = -2

Query: 227 MFSVMGGRSGYGSMRDRGYGDTGFGRSS-PVGYGFGRSGGD----------MFND-MGG- 87
           MF+ +G    +G  RDRGYGD GFGRS     YGFGRSGG+           F+D MGG 
Sbjct: 479 MFNDIGAGGRFGGARDRGYGDMGFGRSGRQAEYGFGRSGGNRGPGFGRSGSQFSDEMGGY 538

Query: 86  RSRFGSMRDHGYGDTGFGHSNRPVGSG 6
             RFGS  ++  G+ G   S+RP G G
Sbjct: 539 GGRFGS--NNRSGNFGGSASSRPSGFG 563


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